Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc29m04
         (677 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      27   0.14 
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      27   0.14 
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    23   2.3  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    22   5.3  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   5.3  
AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.       21   7.0  
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    21   9.3  

>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 27.1 bits (57), Expect = 0.14
 Identities = 24/112 (21%), Positives = 47/112 (41%), Gaps = 4/112 (3%)
 Frame = +3

Query: 132 KEEMAQAKEKRKLKAEYKELGRPKKPMSSYFIYMQSRKDNIQGK-TLKE---YQETVKKD 299
           K  +  +K  +      K+    KKP++++ +YM+  +  +  + TLKE     + + + 
Sbjct: 457 KNNLGDSKNNQDGNNGEKKKPHIKKPLNAFMLYMKEMRAKVVAECTLKESAAINQILGRR 516

Query: 300 WINLPDSEKAKLEKQAQTLMDKYKKDLQAWELKMVSIGRTDLVRSKPAKEKK 455
           W  L   E+AK  + A+     + +    W        R +  R K  K K+
Sbjct: 517 WHALGREEQAKYYELARRERQLHMQLYPDWS------SRANATRGKKRKRKQ 562



 Score = 21.8 bits (44), Expect = 5.3
 Identities = 7/26 (26%), Positives = 14/26 (53%)
 Frame = +1

Query: 16  RQKPKWRKNIRKIWRITIKLKQCMRH 93
           R++  WR+N     R+  + ++C  H
Sbjct: 593 REQLTWRRNFHGPHRLAARSRRCCYH 618


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 27.1 bits (57), Expect = 0.14
 Identities = 24/112 (21%), Positives = 47/112 (41%), Gaps = 4/112 (3%)
 Frame = +3

Query: 132 KEEMAQAKEKRKLKAEYKELGRPKKPMSSYFIYMQSRKDNIQGK-TLKE---YQETVKKD 299
           K  +  +K  +      K+    KKP++++ +YM+  +  +  + TLKE     + + + 
Sbjct: 349 KNNLGDSKNNQDGNNGEKKKPHIKKPLNAFMLYMKEMRAKVVAECTLKESAAINQILGRR 408

Query: 300 WINLPDSEKAKLEKQAQTLMDKYKKDLQAWELKMVSIGRTDLVRSKPAKEKK 455
           W  L   E+AK  + A+     + +    W        R +  R K  K K+
Sbjct: 409 WHALGREEQAKYYELARRERQLHMQLYPDWS------SRANATRGKKRKRKQ 454



 Score = 21.8 bits (44), Expect = 5.3
 Identities = 7/26 (26%), Positives = 14/26 (53%)
 Frame = +1

Query: 16  RQKPKWRKNIRKIWRITIKLKQCMRH 93
           R++  WR+N     R+  + ++C  H
Sbjct: 485 REQLTWRRNFHGPHRLAARSRRCCYH 510


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = -3

Query: 273 PLVFFLVYYLF*TACI*SMKTLVS 202
           P+VF LVY++   ACI    T VS
Sbjct: 161 PVVFDLVYFILAFACISIAYTNVS 184


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 15/53 (28%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
 Frame = -2

Query: 250 LSFLDCMYIKYEDIGFLGR-PSSLYSAFNFLFSLACAISSLTLFISAFCSSVN 95
           L+ LD ++  + ++  L +  +S+Y   NFLF L+     +T F   + S  N
Sbjct: 208 LALLDIVHGVHNELCNLCQVANSIYGFQNFLFVLSTFSICITQFYYCYDSGFN 260


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 13/36 (36%), Positives = 17/36 (47%)
 Frame = -2

Query: 277 YSFSVFPCILSFLDCMYIKYEDIGFLGRPSSLYSAF 170
           Y+F +F   L FL C+Y     + FL      Y AF
Sbjct: 118 YAFIIFTVHLLFLLCIYYFVVPLFFLLCIYYFYCAF 153


>AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.
          Length = 256

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 7/14 (50%), Positives = 12/14 (85%)
 Frame = +3

Query: 438 PAKEKKTKKVDSSQ 479
           P+KE+ +KK+D +Q
Sbjct: 178 PSKEEVSKKIDDNQ 191


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = -3

Query: 534 QLANR*VWNQHH 499
           QLAN+ +W+Q H
Sbjct: 22  QLANKELWDQFH 33


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 138,318
Number of Sequences: 336
Number of extensions: 2645
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17697850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)