Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc29m04
         (677 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    39   2e-04
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    25   1.7  
DQ974165-1|ABJ52805.1|  482|Anopheles gambiae serpin 5 protein.        25   2.9  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            24   3.8  
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    24   3.8  
DQ974170-1|ABJ52810.1|  511|Anopheles gambiae serpin 12 protein.       24   5.1  
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    24   5.1  

>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 38.7 bits (86), Expect = 2e-04
 Identities = 33/132 (25%), Positives = 58/132 (43%), Gaps = 3/132 (2%)
 Frame = +3

Query: 9   DMETKTQMAKEYQKDLEDYNKIKAMYETSLTEEQKAD-IKRVKEEMAQAKEKRKLKAEYK 185
           + E K +   EY + +ED  K     +  L+E QK D  +R  E +    E ++ + + +
Sbjct: 181 ESEGKLEKISEYLRTIEDRLKTLEEEKEELSEYQKWDKARRTLEYVIYETELKETRKQLE 240

Query: 186 EL-GRPKKPMSSYFIYMQS-RKDNIQGKTLKEYQETVKKDWINLPDSEKAKLEKQAQTLM 359
           EL G+ K       +  Q  +K   + K  ++  +  KKD +   D +     +  Q L 
Sbjct: 241 ELDGQRKSSGDKQLLLTQEIQKAQDRLKNAQKALKDAKKDVVTAKDEKSVLATEHQQLLR 300

Query: 360 DKYKKDLQAWEL 395
           +K K DL   +L
Sbjct: 301 EKTKLDLTISDL 312


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
            precursor protein.
          Length = 1623

 Score = 25.4 bits (53), Expect = 1.7
 Identities = 26/96 (27%), Positives = 44/96 (45%), Gaps = 3/96 (3%)
 Frame = +3

Query: 6    LDMETKTQMAKEYQKDLEDYNKI-KAMYETSLTEEQKADIKRVKEEMAQAKEKRKLKAEY 182
            L  E K ++ +      E  +++ KAM E SL   + A+++ +        E R+L A  
Sbjct: 1503 LTNEAKEKVGQAQLNSNEAKSQVDKAMREVSLIMSELANLREIDVNSLDDLE-RRLSAAE 1561

Query: 183  KEL--GRPKKPMSSYFIYMQSRKDNIQGKTLKEYQE 284
            KEL   +  K +SS          NIQ + ++ YQ+
Sbjct: 1562 KELEDAQLTKRLSSLV-----EAKNIQNQNIRSYQK 1592


>DQ974165-1|ABJ52805.1|  482|Anopheles gambiae serpin 5 protein.
          Length = 482

 Score = 24.6 bits (51), Expect = 2.9
 Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
 Frame = +3

Query: 276 YQETVKKDWINLP-DSEKAKLEKQAQTLMDKYKKDLQAWELKM 401
           Y+      +I LP DS +A+L +Q Q  +   + D   W++KM
Sbjct: 318 YRNRTTSMYIVLPNDSNRARL-RQLQASLSSAELDRLIWQMKM 359


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 24.2 bits (50), Expect = 3.8
 Identities = 17/70 (24%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
 Frame = +3

Query: 426  VRSKPAKEKKTKKVDSS-Q*ELGCSDDADSILTDSPIVDMKSVQSIDKDVKTSQIIPLNS 602
            +R +  K ++++K D+S Q ++  SD +       PIVD+   + +D+ +      P   
Sbjct: 1290 LRDQEEKRRQSEKQDTSAQSDIMISDASGR----HPIVDLGPYRLVDEMISYYGFEPYER 1345

Query: 603  DSIGKDQRET 632
            +  GK+++ T
Sbjct: 1346 NHFGKEKKWT 1355


>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 24.2 bits (50), Expect = 3.8
 Identities = 14/57 (24%), Positives = 31/57 (54%), Gaps = 5/57 (8%)
 Frame = +3

Query: 99   TEEQKADIKRVKEEMAQAKEK-----RKLKAEYKELGRPKKPMSSYFIYMQSRKDNI 254
            T+E  A +  +K+++ Q KEK     ++LKA+Y +  +  K      + ++ +++ I
Sbjct: 859  TDEMTAAVTALKQQIKQHKEKMNSQSKELKAKYHQRDKLLKQNDELKLEIKKKENEI 915


>DQ974170-1|ABJ52810.1|  511|Anopheles gambiae serpin 12 protein.
          Length = 511

 Score = 23.8 bits (49), Expect = 5.1
 Identities = 22/106 (20%), Positives = 46/106 (43%), Gaps = 1/106 (0%)
 Frame = +3

Query: 351 TLMDKYKKDL-QAWELKMVSIGRTDLVRSKPAKEKKTKKVDSSQ*ELGCSDDADSILTDS 527
           +++  YK  L Q + +++  I R D    +P        V+    E     D D++    
Sbjct: 60  SVLQAYKDVLEQNYAVEVRDIERNDYNFDEPKTSLDPVVVEEEIIEESNGPDGDNL---- 115

Query: 528 PIVDMKSVQSIDKDVKTSQIIPLNSDSIGKDQRETDTNHXSTGDQV 665
            +++  S  S  KD+   +++ + S    +D+  TDT   +  D++
Sbjct: 116 -VLEQGSNNSNSKDIVDFEVLKIKSALPVEDELRTDTGISTKYDEI 160


>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 23.8 bits (49), Expect = 5.1
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +3

Query: 9   DMETKTQMAKEYQKDLEDYNK 71
           D+ET  +   EY + LED+ +
Sbjct: 731 DLETSKKNINEYDRQLEDFTR 751


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 592,757
Number of Sequences: 2352
Number of extensions: 10442
Number of successful extensions: 28
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68159265
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)