Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc29m03
         (730 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY146746-1|AAO12061.1|  333|Anopheles gambiae odorant-binding pr...    27   0.45 
AJ439060-18|CAD27769.1|  257|Anopheles gambiae hypothetical prot...    27   0.79 
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    26   1.4  
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            23   9.7  
AJ010299-1|CAA09070.1|  722|Anopheles gambiae stat protein.            23   9.7  

>AY146746-1|AAO12061.1|  333|Anopheles gambiae odorant-binding
           protein AgamOBP43 protein.
          Length = 333

 Score = 27.5 bits (58), Expect = 0.45
 Identities = 20/59 (33%), Positives = 26/59 (44%)
 Frame = +3

Query: 519 MCACNEAFYASLYVLHFYSGPTILGVELYRLIAMVTMPTAIVKTGISVLHGFVASLNLA 695
           MC+   AF   L +L + +  TILGVE Y      T     V T  + L   V  L +A
Sbjct: 1   MCSNRSAF--GLLLLAWLASVTILGVEAYATPPPTTANCTTVSTFDAALQECVVQLGIA 57


>AJ439060-18|CAD27769.1|  257|Anopheles gambiae hypothetical protein
           protein.
          Length = 257

 Score = 26.6 bits (56), Expect = 0.79
 Identities = 12/46 (26%), Positives = 22/46 (47%)
 Frame = -2

Query: 627 SSPWQSAYTAPHLELLVLNRSAERTAMRRRLHCKHTYRKGATCWCN 490
           +SP +        + + L +   +   R+RL  KHT+ + A  +CN
Sbjct: 114 NSPSEETIGRTFSKFMTLGKVRGKQTPRKRLRLKHTFAQEAKQFCN 159


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
           precursor protein.
          Length = 1623

 Score = 25.8 bits (54), Expect = 1.4
 Identities = 13/37 (35%), Positives = 19/37 (51%)
 Frame = -3

Query: 287 HCTKFSTLIKVPGCMTVHGVEQCRDDVAGTRQNAMCR 177
           +C +  +L   P C  V GV  C+++V G R    CR
Sbjct: 445 NCDERGSLDNTPSCDPVTGVCSCKENVEG-RHCRECR 480


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 23.0 bits (47), Expect = 9.7
 Identities = 9/36 (25%), Positives = 13/36 (36%)
 Frame = -2

Query: 369 TRMCIGDRMSRESPRGKRCQLCRSIDQALHQI*YSD 262
           T  C          R K C  CR +  A+  + + D
Sbjct: 229 TEACFSQSRRASFKRAKTCDWCRHVRHAVSYVDFQD 264


>AJ010299-1|CAA09070.1|  722|Anopheles gambiae stat protein.
          Length = 722

 Score = 23.0 bits (47), Expect = 9.7
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -2

Query: 351 DRMSRESPRGKRCQLCRS 298
           D++S   P  ++C LCRS
Sbjct: 70  DQVSANLPNKRKCLLCRS 87


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 828,511
Number of Sequences: 2352
Number of extensions: 19843
Number of successful extensions: 71
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 71
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 71
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 74428737
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)