Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc29m01
(715 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81532-8|CAB04327.2| 248|Caenorhabditis elegans Hypothetical pr... 62 3e-10
U55369-5|AAM29663.2| 1046|Caenorhabditis elegans Hypothetical pr... 39 0.004
U55369-4|AAM29662.1| 1022|Caenorhabditis elegans Hypothetical pr... 39 0.004
Z82288-6|CAB05325.1| 1112|Caenorhabditis elegans Hypothetical pr... 33 0.20
AB201389-1|BAE78829.1| 1113|Caenorhabditis elegans recepotor typ... 33 0.20
U80445-2|AAB37795.2| 1029|Caenorhabditis elegans Hypothetical pr... 33 0.27
Z68219-8|CAD59155.1| 430|Caenorhabditis elegans Hypothetical pr... 31 0.62
Z68219-1|CAA92481.2| 387|Caenorhabditis elegans Hypothetical pr... 31 0.62
Z68216-7|CAD59147.1| 430|Caenorhabditis elegans Hypothetical pr... 31 0.62
Z93398-7|CAD90188.2| 4955|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z93398-6|CAD90187.2| 4944|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z92788-7|CAD90177.2| 4955|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z92788-6|CAD90176.2| 4944|Caenorhabditis elegans Hypothetical pr... 31 1.1
AL031637-4|CAD90184.2| 4955|Caenorhabditis elegans Hypothetical ... 31 1.1
AL031637-3|CAD90183.2| 4944|Caenorhabditis elegans Hypothetical ... 31 1.1
AJ505905-1|CAD44516.1| 3522|Caenorhabditis elegans VAB-10B prote... 31 1.1
AJ505816-1|CAD44324.1| 4944|Caenorhabditis elegans VAB-10B prote... 31 1.1
Z50755-2|CAA90633.1| 444|Caenorhabditis elegans Hypothetical pr... 30 1.4
Z81531-7|CAB04320.1| 722|Caenorhabditis elegans Hypothetical pr... 29 2.5
Z73977-1|CAA98290.1| 573|Caenorhabditis elegans Hypothetical pr... 29 2.5
Z70205-1|CAA94117.2| 460|Caenorhabditis elegans Hypothetical pr... 29 2.5
AF022983-4|AAB69944.1| 387|Caenorhabditis elegans Hypothetical ... 29 2.5
Z83116-12|CAB60294.2| 346|Caenorhabditis elegans Hypothetical p... 28 5.8
Z81047-15|CAB02826.2| 346|Caenorhabditis elegans Hypothetical p... 28 5.8
Z69663-2|CAA93509.2| 819|Caenorhabditis elegans Hypothetical pr... 28 5.8
U80452-10|AAB37853.1| 214|Caenorhabditis elegans Hypothetical p... 28 7.6
AL034393-9|CAA22314.1| 248|Caenorhabditis elegans Hypothetical ... 28 7.6
>Z81532-8|CAB04327.2| 248|Caenorhabditis elegans Hypothetical
protein F36F2.4 protein.
Length = 248
Score = 62.5 bits (145), Expect = 3e-10
Identities = 48/157 (30%), Positives = 78/157 (49%), Gaps = 5/157 (3%)
Frame = +3
Query: 240 DENGDNFQRLSQTIASNIKKISQNVSSMSKMVNQLQTPQDSQELRAQL--RQIQNYTQKL 413
D N D + + NI+ ++Q V + + L +S + +L R+ N Q+L
Sbjct: 2 DFNRDAGNETASQLQLNIQNLNQQVIQLESFITNLSDSSESGQRERELFNRKAHN-AQEL 60
Query: 414 AKDTSSLLMELMRMPKDNAANKLTRERLSDEYIATLNSFQATQRLVAQKTKEDVKKAK-- 587
+K+T++LL L+ M + + RERL +EYI LN QA+QR AQ K + A+
Sbjct: 61 SKETNALLKRLVVMSNSDKNLRGVRERLQNEYIGVLNRLQASQRKAAQTEKAGMVAAEMD 120
Query: 588 AQSINIGDPFAM-GNSNKDLVEMTETDVRKQEQMNMQ 695
AQ+ + M GN+ + +M T Q+Q N+Q
Sbjct: 121 AQAARDAAEYDMYGNNGRSGGQMQMT---AQQQGNLQ 154
>U55369-5|AAM29663.2| 1046|Caenorhabditis elegans Hypothetical
protein C18C4.5b protein.
Length = 1046
Score = 38.7 bits (86), Expect = 0.004
Identities = 30/119 (25%), Positives = 58/119 (48%)
Frame = +3
Query: 357 DSQELRAQLRQIQNYTQKLAKDTSSLLMELMRMPKDNAANKLTRERLSDEYIATLNSFQA 536
+ QELR QL + QN Q+L +S++ +L + N+L + + L + +
Sbjct: 17 EKQELRKQLDREQNEKQELFMQINSMIAKLADSGDQDEINRLKSD--VNSLKRELEAEKI 74
Query: 537 TQRLVAQKTKEDVKKAKAQSINIGDPFAMGNSNKDLVEMTETDVRKQEQMNMQAERSLI 713
A + K +++KAK + I D G+S KD +E ++++Q + + +SL+
Sbjct: 75 ASNAEAARLKSELQKAKNE---IQDSIKDGDSEKDAMEQEIENLQRQLNIKTASLQSLM 130
>U55369-4|AAM29662.1| 1022|Caenorhabditis elegans Hypothetical
protein C18C4.5a protein.
Length = 1022
Score = 38.7 bits (86), Expect = 0.004
Identities = 30/119 (25%), Positives = 58/119 (48%)
Frame = +3
Query: 357 DSQELRAQLRQIQNYTQKLAKDTSSLLMELMRMPKDNAANKLTRERLSDEYIATLNSFQA 536
+ QELR QL + QN Q+L +S++ +L + N+L + + L + +
Sbjct: 17 EKQELRKQLDREQNEKQELFMQINSMIAKLADSGDQDEINRLKSD--VNSLKRELEAEKI 74
Query: 537 TQRLVAQKTKEDVKKAKAQSINIGDPFAMGNSNKDLVEMTETDVRKQEQMNMQAERSLI 713
A + K +++KAK + I D G+S KD +E ++++Q + + +SL+
Sbjct: 75 ASNAEAARLKSELQKAKNE---IQDSIKDGDSEKDAMEQEIENLQRQLNIKTASLQSLM 130
>Z82288-6|CAB05325.1| 1112|Caenorhabditis elegans Hypothetical protein
ZK896.8 protein.
Length = 1112
Score = 33.1 bits (72), Expect = 0.20
Identities = 32/143 (22%), Positives = 66/143 (46%), Gaps = 7/143 (4%)
Frame = +3
Query: 183 LFQFIVVKMEASYQGGVSYDENGDNFQRLSQTIASNIKKIS---QNVSSMSKMVNQLQTP 353
++ F +V E ++ + + +N N L +A K +S QN + +N L
Sbjct: 767 IYSFGMVMYEILFRS-LPFRDN-TNISELVDYLADGSKTVSPEIQNQMGLHPDLNALLRD 824
Query: 354 --QDSQELRAQLRQIQNYTQKLAKDTSSLLMELMRMPKDNAAN--KLTRERLSDEYIATL 521
++ E+R +R+++ T+ + K SL+ ++M+M + A N KL ER A +
Sbjct: 825 CWSENPEIRPSIRRVRLNTEMVLKTKGSLVDQMMKMMEQYANNLEKLVAERTGMLEEANI 884
Query: 522 NSFQATQRLVAQKTKEDVKKAKA 590
+ Q +L+ ++K ++
Sbjct: 885 RADQLLTQLLPAYVANELKMGRS 907
>AB201389-1|BAE78829.1| 1113|Caenorhabditis elegans recepotor type
guanyly cyclase protein.
Length = 1113
Score = 33.1 bits (72), Expect = 0.20
Identities = 32/143 (22%), Positives = 66/143 (46%), Gaps = 7/143 (4%)
Frame = +3
Query: 183 LFQFIVVKMEASYQGGVSYDENGDNFQRLSQTIASNIKKIS---QNVSSMSKMVNQLQTP 353
++ F +V E ++ + + +N N L +A K +S QN + +N L
Sbjct: 768 IYSFGMVMYEILFRS-LPFRDN-TNISELVDYLADGSKTVSPEIQNQMGLHPDLNALLRD 825
Query: 354 --QDSQELRAQLRQIQNYTQKLAKDTSSLLMELMRMPKDNAAN--KLTRERLSDEYIATL 521
++ E+R +R+++ T+ + K SL+ ++M+M + A N KL ER A +
Sbjct: 826 CWSENPEIRPSIRRVRLNTEMVLKTKGSLVDQMMKMMEQYANNLEKLVAERTGMLEEANI 885
Query: 522 NSFQATQRLVAQKTKEDVKKAKA 590
+ Q +L+ ++K ++
Sbjct: 886 RADQLLTQLLPAYVANELKMGRS 908
>U80445-2|AAB37795.2| 1029|Caenorhabditis elegans Hypothetical
protein C50F2.2 protein.
Length = 1029
Score = 32.7 bits (71), Expect = 0.27
Identities = 29/127 (22%), Positives = 57/127 (44%)
Frame = +3
Query: 333 VNQLQTPQDSQELRAQLRQIQNYTQKLAKDTSSLLMELMRMPKDNAANKLTRERLSDEYI 512
+NQL+T D +++ N +K K++ SLL EL+ ++ + + D+
Sbjct: 129 LNQLETNNDGMPTVMNVKKATNCPEKSLKESGSLLPELVEKKREE------KRQQEDQKA 182
Query: 513 ATLNSFQATQRLVAQKTKEDVKKAKAQSINIGDPFAMGNSNKDLVEMTETDVRKQEQMNM 692
L ++ V QK ++ +K+ I G S+KD++ + + +Q + +
Sbjct: 183 VVLEK----RKPVTQKVQDHLKRRSKSPIGRG----KDQSDKDIISNKKRKLNRQSKEEI 234
Query: 693 QAERSLI 713
ERS I
Sbjct: 235 D-ERSKI 240
>Z68219-8|CAD59155.1| 430|Caenorhabditis elegans Hypothetical
protein T05A1.1a protein.
Length = 430
Score = 31.5 bits (68), Expect = 0.62
Identities = 18/52 (34%), Positives = 32/52 (61%), Gaps = 3/52 (5%)
Frame = -3
Query: 704 TFSL-HIHLLLLTDICLGHLYQIFVTVPHSE--RIPNIYRLSLCFFHIFFCL 558
TFSL ++H+ LL LG+ +++T+ H + + NI+ L+LC ++ CL
Sbjct: 71 TFSLLYLHIFLLG--ILGNSAVLYLTMKHRQLQTVQNIFILNLCASNVLMCL 120
>Z68219-1|CAA92481.2| 387|Caenorhabditis elegans Hypothetical
protein T05A1.1b protein.
Length = 387
Score = 31.5 bits (68), Expect = 0.62
Identities = 18/52 (34%), Positives = 32/52 (61%), Gaps = 3/52 (5%)
Frame = -3
Query: 704 TFSL-HIHLLLLTDICLGHLYQIFVTVPHSE--RIPNIYRLSLCFFHIFFCL 558
TFSL ++H+ LL LG+ +++T+ H + + NI+ L+LC ++ CL
Sbjct: 28 TFSLLYLHIFLLG--ILGNSAVLYLTMKHRQLQTVQNIFILNLCASNVLMCL 77
>Z68216-7|CAD59147.1| 430|Caenorhabditis elegans Hypothetical
protein T05A1.1a protein.
Length = 430
Score = 31.5 bits (68), Expect = 0.62
Identities = 18/52 (34%), Positives = 32/52 (61%), Gaps = 3/52 (5%)
Frame = -3
Query: 704 TFSL-HIHLLLLTDICLGHLYQIFVTVPHSE--RIPNIYRLSLCFFHIFFCL 558
TFSL ++H+ LL LG+ +++T+ H + + NI+ L+LC ++ CL
Sbjct: 71 TFSLLYLHIFLLG--ILGNSAVLYLTMKHRQLQTVQNIFILNLCASNVLMCL 120
>Z93398-7|CAD90188.2| 4955|Caenorhabditis elegans Hypothetical protein
ZK1151.1c protein.
Length = 4955
Score = 30.7 bits (66), Expect = 1.1
Identities = 29/119 (24%), Positives = 54/119 (45%), Gaps = 1/119 (0%)
Frame = +3
Query: 231 VSYDENGDNFQRLSQTIASNIKKISQNVSSMSKMVNQLQTPQDSQELRAQLRQIQNYTQK 410
+S ++ GD L ++ S + + + + ++ + + RA++++ TQK
Sbjct: 2267 MSSNDIGDQLATLD-SLKSRFGGVDKALEKLKGILEATEELEVDATNRAEIQEQLETTQK 2325
Query: 411 LAKDTSSLLMELMRMPKDNAANK-LTRERLSDEYIATLNSFQATQRLVAQKTKEDVKKA 584
A D +E ++ NA N+ L E+ DE I T+NS + L A E +K A
Sbjct: 2326 KA-DELERKIENVKKAALNAQNEGLELEKKLDELIGTVNSAENELELAAPIAAESLKLA 2383
>Z93398-6|CAD90187.2| 4944|Caenorhabditis elegans Hypothetical protein
ZK1151.1b protein.
Length = 4944
Score = 30.7 bits (66), Expect = 1.1
Identities = 29/119 (24%), Positives = 54/119 (45%), Gaps = 1/119 (0%)
Frame = +3
Query: 231 VSYDENGDNFQRLSQTIASNIKKISQNVSSMSKMVNQLQTPQDSQELRAQLRQIQNYTQK 410
+S ++ GD L ++ S + + + + ++ + + RA++++ TQK
Sbjct: 2267 MSSNDIGDQLATLD-SLKSRFGGVDKALEKLKGILEATEELEVDATNRAEIQEQLETTQK 2325
Query: 411 LAKDTSSLLMELMRMPKDNAANK-LTRERLSDEYIATLNSFQATQRLVAQKTKEDVKKA 584
A D +E ++ NA N+ L E+ DE I T+NS + L A E +K A
Sbjct: 2326 KA-DELERKIENVKKAALNAQNEGLELEKKLDELIGTVNSAENELELAAPIAAESLKLA 2383
>Z92788-7|CAD90177.2| 4955|Caenorhabditis elegans Hypothetical protein
ZK1151.1c protein.
Length = 4955
Score = 30.7 bits (66), Expect = 1.1
Identities = 29/119 (24%), Positives = 54/119 (45%), Gaps = 1/119 (0%)
Frame = +3
Query: 231 VSYDENGDNFQRLSQTIASNIKKISQNVSSMSKMVNQLQTPQDSQELRAQLRQIQNYTQK 410
+S ++ GD L ++ S + + + + ++ + + RA++++ TQK
Sbjct: 2267 MSSNDIGDQLATLD-SLKSRFGGVDKALEKLKGILEATEELEVDATNRAEIQEQLETTQK 2325
Query: 411 LAKDTSSLLMELMRMPKDNAANK-LTRERLSDEYIATLNSFQATQRLVAQKTKEDVKKA 584
A D +E ++ NA N+ L E+ DE I T+NS + L A E +K A
Sbjct: 2326 KA-DELERKIENVKKAALNAQNEGLELEKKLDELIGTVNSAENELELAAPIAAESLKLA 2383
>Z92788-6|CAD90176.2| 4944|Caenorhabditis elegans Hypothetical protein
ZK1151.1b protein.
Length = 4944
Score = 30.7 bits (66), Expect = 1.1
Identities = 29/119 (24%), Positives = 54/119 (45%), Gaps = 1/119 (0%)
Frame = +3
Query: 231 VSYDENGDNFQRLSQTIASNIKKISQNVSSMSKMVNQLQTPQDSQELRAQLRQIQNYTQK 410
+S ++ GD L ++ S + + + + ++ + + RA++++ TQK
Sbjct: 2267 MSSNDIGDQLATLD-SLKSRFGGVDKALEKLKGILEATEELEVDATNRAEIQEQLETTQK 2325
Query: 411 LAKDTSSLLMELMRMPKDNAANK-LTRERLSDEYIATLNSFQATQRLVAQKTKEDVKKA 584
A D +E ++ NA N+ L E+ DE I T+NS + L A E +K A
Sbjct: 2326 KA-DELERKIENVKKAALNAQNEGLELEKKLDELIGTVNSAENELELAAPIAAESLKLA 2383
>AL031637-4|CAD90184.2| 4955|Caenorhabditis elegans Hypothetical
protein ZK1151.1c protein.
Length = 4955
Score = 30.7 bits (66), Expect = 1.1
Identities = 29/119 (24%), Positives = 54/119 (45%), Gaps = 1/119 (0%)
Frame = +3
Query: 231 VSYDENGDNFQRLSQTIASNIKKISQNVSSMSKMVNQLQTPQDSQELRAQLRQIQNYTQK 410
+S ++ GD L ++ S + + + + ++ + + RA++++ TQK
Sbjct: 2267 MSSNDIGDQLATLD-SLKSRFGGVDKALEKLKGILEATEELEVDATNRAEIQEQLETTQK 2325
Query: 411 LAKDTSSLLMELMRMPKDNAANK-LTRERLSDEYIATLNSFQATQRLVAQKTKEDVKKA 584
A D +E ++ NA N+ L E+ DE I T+NS + L A E +K A
Sbjct: 2326 KA-DELERKIENVKKAALNAQNEGLELEKKLDELIGTVNSAENELELAAPIAAESLKLA 2383
>AL031637-3|CAD90183.2| 4944|Caenorhabditis elegans Hypothetical
protein ZK1151.1b protein.
Length = 4944
Score = 30.7 bits (66), Expect = 1.1
Identities = 29/119 (24%), Positives = 54/119 (45%), Gaps = 1/119 (0%)
Frame = +3
Query: 231 VSYDENGDNFQRLSQTIASNIKKISQNVSSMSKMVNQLQTPQDSQELRAQLRQIQNYTQK 410
+S ++ GD L ++ S + + + + ++ + + RA++++ TQK
Sbjct: 2267 MSSNDIGDQLATLD-SLKSRFGGVDKALEKLKGILEATEELEVDATNRAEIQEQLETTQK 2325
Query: 411 LAKDTSSLLMELMRMPKDNAANK-LTRERLSDEYIATLNSFQATQRLVAQKTKEDVKKA 584
A D +E ++ NA N+ L E+ DE I T+NS + L A E +K A
Sbjct: 2326 KA-DELERKIENVKKAALNAQNEGLELEKKLDELIGTVNSAENELELAAPIAAESLKLA 2383
>AJ505905-1|CAD44516.1| 3522|Caenorhabditis elegans VAB-10B protein
protein.
Length = 3522
Score = 30.7 bits (66), Expect = 1.1
Identities = 29/119 (24%), Positives = 54/119 (45%), Gaps = 1/119 (0%)
Frame = +3
Query: 231 VSYDENGDNFQRLSQTIASNIKKISQNVSSMSKMVNQLQTPQDSQELRAQLRQIQNYTQK 410
+S ++ GD L ++ S + + + + ++ + + RA++++ TQK
Sbjct: 2267 MSSNDIGDQLATLD-SLKSRFGGVDKALEKLKGILEATEELEVDATNRAEIQEQLETTQK 2325
Query: 411 LAKDTSSLLMELMRMPKDNAANK-LTRERLSDEYIATLNSFQATQRLVAQKTKEDVKKA 584
A D +E ++ NA N+ L E+ DE I T+NS + L A E +K A
Sbjct: 2326 KA-DELERKIENVKKAALNAQNEGLELEKKLDELIGTVNSAENELELAAPIAAESLKLA 2383
>AJ505816-1|CAD44324.1| 4944|Caenorhabditis elegans VAB-10B protein
protein.
Length = 4944
Score = 30.7 bits (66), Expect = 1.1
Identities = 29/119 (24%), Positives = 54/119 (45%), Gaps = 1/119 (0%)
Frame = +3
Query: 231 VSYDENGDNFQRLSQTIASNIKKISQNVSSMSKMVNQLQTPQDSQELRAQLRQIQNYTQK 410
+S ++ GD L ++ S + + + + ++ + + RA++++ TQK
Sbjct: 2267 MSSNDIGDQLATLD-SLKSRFGGVDKALEKLKGILEATEELEVDATNRAEIQEQLETTQK 2325
Query: 411 LAKDTSSLLMELMRMPKDNAANK-LTRERLSDEYIATLNSFQATQRLVAQKTKEDVKKA 584
A D +E ++ NA N+ L E+ DE I T+NS + L A E +K A
Sbjct: 2326 KA-DELERKIENVKKAALNAQNEGLELEKKLDELIGTVNSAENELELAAPIAAESLKLA 2383
>Z50755-2|CAA90633.1| 444|Caenorhabditis elegans Hypothetical
protein R12H7.2 protein.
Length = 444
Score = 30.3 bits (65), Expect = 1.4
Identities = 17/63 (26%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Frame = +3
Query: 108 HSSVVYGKKNTNHYFN*HKTIHTH-HLFQFIVVKMEASYQGGVSYDENGDNFQRLSQTIA 284
H Y K N NH+F+ ++ ++ + + + M+A Y G +S NF + T +
Sbjct: 56 HGYKKYLKTNGNHHFDKYQALNVEGEIDELLRNYMDAQYFGTISIGTPAQNFTVIFDTGS 115
Query: 285 SNI 293
SN+
Sbjct: 116 SNL 118
>Z81531-7|CAB04320.1| 722|Caenorhabditis elegans Hypothetical
protein F36D3.8 protein.
Length = 722
Score = 29.5 bits (63), Expect = 2.5
Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +3
Query: 153 N*HKTIHTHHLFQFIVVKM-EASYQGGVSYDENGDNFQRLSQTIASNIKK 299
N +TIH +H FI+ M + G V+YDE+G N + Q I KK
Sbjct: 211 NYDQTIHPYHREMFIISHMYDKDGFGKVAYDEDG-NVIGIGQAIVYQTKK 259
Score = 29.5 bits (63), Expect = 2.5
Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +3
Query: 153 N*HKTIHTHHLFQFIVVKM-EASYQGGVSYDENGDNFQRLSQTIASNIKK 299
N +TIH +H FI+ M + G V+YDE+G N + Q I KK
Sbjct: 581 NYDQTIHPYHREMFIISHMYDKDGFGKVAYDEDG-NVIGIGQAIVYKTKK 629
>Z73977-1|CAA98290.1| 573|Caenorhabditis elegans Hypothetical
protein T28B11.1 protein.
Length = 573
Score = 29.5 bits (63), Expect = 2.5
Identities = 20/63 (31%), Positives = 31/63 (49%)
Frame = +3
Query: 243 ENGDNFQRLSQTIASNIKKISQNVSSMSKMVNQLQTPQDSQELRAQLRQIQNYTQKLAKD 422
E+ D+ S +IAS + +VSS SK + Q + +ELR R I + T+ +
Sbjct: 100 ESSDSGSASSSSIASTSSSEADSVSSSSKTKTKQQQTEREKELRR--RNISDRTKSSSSS 157
Query: 423 TSS 431
T S
Sbjct: 158 TDS 160
>Z70205-1|CAA94117.2| 460|Caenorhabditis elegans Hypothetical
protein C11H1.2 protein.
Length = 460
Score = 29.5 bits (63), Expect = 2.5
Identities = 14/54 (25%), Positives = 30/54 (55%)
Frame = +3
Query: 294 KKISQNVSSMSKMVNQLQTPQDSQELRAQLRQIQNYTQKLAKDTSSLLMELMRM 455
+K+SQ S +SK+ + + L++Q+ ++QN + L + L +EL+ +
Sbjct: 221 EKVSQEPSFLSKLWSNFSENSNENNLQSQISKMQNEIKPLETLSRYLFLELVEL 274
>AF022983-4|AAB69944.1| 387|Caenorhabditis elegans Hypothetical
protein R13D11.4 protein.
Length = 387
Score = 29.5 bits (63), Expect = 2.5
Identities = 21/48 (43%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Frame = -3
Query: 689 IHLLLLTDICLGHLYQIFVTVPHSERIPNIYRLSLC---FFHIFFCLL 555
IH L LT + L F+T P R+ NI S+C FF IFF LL
Sbjct: 177 IHPLSLTLPAIILLLFHFLTEPRPSRLQNINITSVCLSPFFPIFFSLL 224
>Z83116-12|CAB60294.2| 346|Caenorhabditis elegans Hypothetical
protein C41G6.2 protein.
Length = 346
Score = 28.3 bits (60), Expect = 5.8
Identities = 17/69 (24%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Frame = -3
Query: 269 KSLKVISILIV*HTSLIRRLHFHHYKLKEMVSMYSFMLIKIMVCILLPIHYRAMIENNQ- 93
K +K I++ + S I + + Y+L + + S +L+ + CIL + +++EN++
Sbjct: 193 KFIKQINVYAI--PSSINSISTYIYELSPKLKIASVVLLVTLTCILFRVRKLSVLENDES 250
Query: 92 TQNMLLIYY 66
+ N LI +
Sbjct: 251 SDNTRLILF 259
>Z81047-15|CAB02826.2| 346|Caenorhabditis elegans Hypothetical
protein C41G6.2 protein.
Length = 346
Score = 28.3 bits (60), Expect = 5.8
Identities = 17/69 (24%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Frame = -3
Query: 269 KSLKVISILIV*HTSLIRRLHFHHYKLKEMVSMYSFMLIKIMVCILLPIHYRAMIENNQ- 93
K +K I++ + S I + + Y+L + + S +L+ + CIL + +++EN++
Sbjct: 193 KFIKQINVYAI--PSSINSISTYIYELSPKLKIASVVLLVTLTCILFRVRKLSVLENDES 250
Query: 92 TQNMLLIYY 66
+ N LI +
Sbjct: 251 SDNTRLILF 259
>Z69663-2|CAA93509.2| 819|Caenorhabditis elegans Hypothetical
protein K02B9.2 protein.
Length = 819
Score = 28.3 bits (60), Expect = 5.8
Identities = 17/68 (25%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
Frame = +3
Query: 504 EYIATLNSFQATQRLVAQKTKEDVKKAKAQSINIGDPFAMGNSN--KDLVEMTETDVRKQ 677
EY + NSFQ R V +++ + K Q +IGD N++ + +++ T R +
Sbjct: 173 EYSFSDNSFQGESRTVQRRSSRATHRVKNQFGSIGDGRTSNNTSLQEPVIQDTRNRNRSE 232
Query: 678 EQMNMQAE 701
M ++
Sbjct: 233 SSSTMSSQ 240
>U80452-10|AAB37853.1| 214|Caenorhabditis elegans Hypothetical
protein C16C8.11 protein.
Length = 214
Score = 27.9 bits (59), Expect = 7.6
Identities = 20/78 (25%), Positives = 41/78 (52%)
Frame = +3
Query: 258 FQRLSQTIASNIKKISQNVSSMSKMVNQLQTPQDSQELRAQLRQIQNYTQKLAKDTSSLL 437
FQ+L Q + ++++ S S +++ + Q +QEL +L + QK+ DT +LL
Sbjct: 11 FQKLQQETSKIQSHLTKDFLSSSAKLSENRVLQATQELCGKLTE----KQKVQDDTINLL 66
Query: 438 MELMRMPKDNAANKLTRE 491
+ + ++N NK+ +
Sbjct: 67 LSALGQIQEN-QNKILNQ 83
>AL034393-9|CAA22314.1| 248|Caenorhabditis elegans Hypothetical
protein Y18D10A.11 protein.
Length = 248
Score = 27.9 bits (59), Expect = 7.6
Identities = 20/67 (29%), Positives = 33/67 (49%)
Frame = +3
Query: 372 RAQLRQIQNYTQKLAKDTSSLLMELMRMPKDNAANKLTRERLSDEYIATLNSFQATQRLV 551
RAQ Q+ +L K+ LL+ L+R ANK E+L++ A + S + V
Sbjct: 85 RAQNEQLSEEKSQLQKENEELLLVLLRTEGIVDANKSLSEQLANAQDAEV-SMTTLKETV 143
Query: 552 AQKTKED 572
A+ +E+
Sbjct: 144 AKLEEEN 150
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,398,108
Number of Sequences: 27780
Number of extensions: 321499
Number of successful extensions: 1070
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1028
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1067
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1666201324
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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