Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc29l22
(302 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82083-1|CAB04967.1| 128|Caenorhabditis elegans Hypothetical pr... 119 4e-28
U23172-2|AAM22069.2| 538|Caenorhabditis elegans Ubiquitin prote... 119 4e-28
U23172-1|AAC46525.1| 838|Caenorhabditis elegans Ubiquitin prote... 119 4e-28
M23433-1|AAA28154.1| 838|Caenorhabditis elegans polyubiquitin p... 119 4e-28
L31492-1|AAC37252.1| 128|Caenorhabditis elegans ubiquitin/ribos... 119 4e-28
Z78420-1|CAB01708.1| 77|Caenorhabditis elegans Hypothetical pr... 89 6e-19
AF040645-8|AAB94982.1| 292|Caenorhabditis elegans Hypothetical ... 67 2e-12
L16530-1|AAA28161.1| 163|Caenorhabditis elegans ubiquitin-like:... 58 1e-09
AC006651-4|AAF39865.1| 163|Caenorhabditis elegans Ubiquitin-lik... 58 1e-09
M21321-1|AAA28153.1| 37|Caenorhabditis elegans protein ( C.ele... 50 3e-07
U80452-4|AAB37860.1| 226|Caenorhabditis elegans Hypothetical pr... 49 6e-07
U09415-1|AAA82164.1| 655|Caenorhabditis elegans Ceprp21 protein. 45 1e-05
AF106576-5|AAC78179.1| 655|Caenorhabditis elegans Yeast prp (sp... 45 1e-05
Z32681-5|CAA83606.1| 341|Caenorhabditis elegans Hypothetical pr... 42 9e-05
U80452-8|AAB37855.1| 244|Caenorhabditis elegans Hypothetical pr... 37 0.002
AC006651-5|AAM48542.1| 47|Caenorhabditis elegans Ubiquitin-lik... 37 0.002
U80452-6|AAB37858.1| 592|Caenorhabditis elegans Hypothetical pr... 35 0.010
U80452-10|AAB37853.1| 214|Caenorhabditis elegans Hypothetical p... 34 0.017
U80452-7|AAB37856.1| 233|Caenorhabditis elegans Hypothetical pr... 33 0.039
Z69904-3|CAA93780.1| 372|Caenorhabditis elegans Hypothetical pr... 32 0.069
Z92834-5|CAB07390.1| 402|Caenorhabditis elegans Hypothetical pr... 29 0.85
U80452-5|AAB37859.1| 180|Caenorhabditis elegans Hypothetical pr... 27 3.4
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 26 4.5
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 26 4.5
U97016-4|AAN84886.1| 2692|Caenorhabditis elegans Lethal protein ... 26 6.0
U97016-3|AAN84885.1| 2695|Caenorhabditis elegans Lethal protein ... 26 6.0
Z71185-3|CAA94905.2| 427|Caenorhabditis elegans Hypothetical pr... 25 7.9
AL161712-22|CAO82055.1| 158|Caenorhabditis elegans Hypothetical... 25 7.9
>Z82083-1|CAB04967.1| 128|Caenorhabditis elegans Hypothetical
protein ZK1010.1 protein.
Length = 128
Score = 119 bits (287), Expect = 4e-28
Identities = 54/76 (71%), Positives = 65/76 (85%)
Frame = +3
Query: 21 MXXFIXTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 200
M F+ TLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 201 IQKESTLHMVLRLRGG 248
IQKESTLH+VLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
>U23172-2|AAM22069.2| 538|Caenorhabditis elegans Ubiquitin protein
1, isoform c protein.
Length = 538
Score = 119 bits (287), Expect = 4e-28
Identities = 54/76 (71%), Positives = 65/76 (85%)
Frame = +3
Query: 21 MXXFIXTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 200
M F+ TLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 201 IQKESTLHMVLRLRGG 248
IQKESTLH+VLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 119 bits (287), Expect = 4e-28
Identities = 54/76 (71%), Positives = 65/76 (85%)
Frame = +3
Query: 21 MXXFIXTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 200
M F+ TLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 77 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 201 IQKESTLHMVLRLRGG 248
IQKESTLH+VLRLRGG
Sbjct: 137 IQKESTLHLVLRLRGG 152
Score = 119 bits (287), Expect = 4e-28
Identities = 54/76 (71%), Positives = 65/76 (85%)
Frame = +3
Query: 21 MXXFIXTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 200
M F+ TLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 153 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 201 IQKESTLHMVLRLRGG 248
IQKESTLH+VLRLRGG
Sbjct: 213 IQKESTLHLVLRLRGG 228
Score = 119 bits (287), Expect = 4e-28
Identities = 54/76 (71%), Positives = 65/76 (85%)
Frame = +3
Query: 21 MXXFIXTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 200
M F+ TLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 229 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 201 IQKESTLHMVLRLRGG 248
IQKESTLH+VLRLRGG
Sbjct: 289 IQKESTLHLVLRLRGG 304
Score = 119 bits (287), Expect = 4e-28
Identities = 54/76 (71%), Positives = 65/76 (85%)
Frame = +3
Query: 21 MXXFIXTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 200
M F+ TLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 305 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 201 IQKESTLHMVLRLRGG 248
IQKESTLH+VLRLRGG
Sbjct: 365 IQKESTLHLVLRLRGG 380
Score = 117 bits (281), Expect = 2e-27
Identities = 53/76 (69%), Positives = 64/76 (84%)
Frame = +3
Query: 21 MXXFIXTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 200
M F+ TL GKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 381 MQIFVKTLIGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 440
Query: 201 IQKESTLHMVLRLRGG 248
IQKESTLH+VLRLRGG
Sbjct: 441 IQKESTLHLVLRLRGG 456
Score = 67.3 bits (157), Expect = 2e-12
Identities = 30/47 (63%), Positives = 37/47 (78%)
Frame = +3
Query: 21 MXXFIXTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAG 161
M F+ TLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAG
Sbjct: 457 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAG 503
>U23172-1|AAC46525.1| 838|Caenorhabditis elegans Ubiquitin protein
1, isoform a protein.
Length = 838
Score = 119 bits (287), Expect = 4e-28
Identities = 54/76 (71%), Positives = 65/76 (85%)
Frame = +3
Query: 21 MXXFIXTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 200
M F+ TLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 201 IQKESTLHMVLRLRGG 248
IQKESTLH+VLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 119 bits (287), Expect = 4e-28
Identities = 54/76 (71%), Positives = 65/76 (85%)
Frame = +3
Query: 21 MXXFIXTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 200
M F+ TLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 77 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 201 IQKESTLHMVLRLRGG 248
IQKESTLH+VLRLRGG
Sbjct: 137 IQKESTLHLVLRLRGG 152
Score = 119 bits (287), Expect = 4e-28
Identities = 54/76 (71%), Positives = 65/76 (85%)
Frame = +3
Query: 21 MXXFIXTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 200
M F+ TLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 153 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 201 IQKESTLHMVLRLRGG 248
IQKESTLH+VLRLRGG
Sbjct: 213 IQKESTLHLVLRLRGG 228
Score = 119 bits (287), Expect = 4e-28
Identities = 54/76 (71%), Positives = 65/76 (85%)
Frame = +3
Query: 21 MXXFIXTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 200
M F+ TLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 229 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 201 IQKESTLHMVLRLRGG 248
IQKESTLH+VLRLRGG
Sbjct: 289 IQKESTLHLVLRLRGG 304
Score = 119 bits (287), Expect = 4e-28
Identities = 54/76 (71%), Positives = 65/76 (85%)
Frame = +3
Query: 21 MXXFIXTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 200
M F+ TLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 305 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 201 IQKESTLHMVLRLRGG 248
IQKESTLH+VLRLRGG
Sbjct: 365 IQKESTLHLVLRLRGG 380
Score = 119 bits (287), Expect = 4e-28
Identities = 54/76 (71%), Positives = 65/76 (85%)
Frame = +3
Query: 21 MXXFIXTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 200
M F+ TLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 457 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 516
Query: 201 IQKESTLHMVLRLRGG 248
IQKESTLH+VLRLRGG
Sbjct: 517 IQKESTLHLVLRLRGG 532
Score = 119 bits (287), Expect = 4e-28
Identities = 54/76 (71%), Positives = 65/76 (85%)
Frame = +3
Query: 21 MXXFIXTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 200
M F+ TLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 533 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 592
Query: 201 IQKESTLHMVLRLRGG 248
IQKESTLH+VLRLRGG
Sbjct: 593 IQKESTLHLVLRLRGG 608
Score = 119 bits (287), Expect = 4e-28
Identities = 54/76 (71%), Positives = 65/76 (85%)
Frame = +3
Query: 21 MXXFIXTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 200
M F+ TLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 609 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 668
Query: 201 IQKESTLHMVLRLRGG 248
IQKESTLH+VLRLRGG
Sbjct: 669 IQKESTLHLVLRLRGG 684
Score = 119 bits (287), Expect = 4e-28
Identities = 54/76 (71%), Positives = 65/76 (85%)
Frame = +3
Query: 21 MXXFIXTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 200
M F+ TLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 685 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 744
Query: 201 IQKESTLHMVLRLRGG 248
IQKESTLH+VLRLRGG
Sbjct: 745 IQKESTLHLVLRLRGG 760
Score = 119 bits (287), Expect = 4e-28
Identities = 54/76 (71%), Positives = 65/76 (85%)
Frame = +3
Query: 21 MXXFIXTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 200
M F+ TLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 761 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 820
Query: 201 IQKESTLHMVLRLRGG 248
IQKESTLH+VLRLRGG
Sbjct: 821 IQKESTLHLVLRLRGG 836
Score = 117 bits (281), Expect = 2e-27
Identities = 53/76 (69%), Positives = 64/76 (84%)
Frame = +3
Query: 21 MXXFIXTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 200
M F+ TL GKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 381 MQIFVKTLIGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 440
Query: 201 IQKESTLHMVLRLRGG 248
IQKESTLH+VLRLRGG
Sbjct: 441 IQKESTLHLVLRLRGG 456
>M23433-1|AAA28154.1| 838|Caenorhabditis elegans polyubiquitin
protein.
Length = 838
Score = 119 bits (287), Expect = 4e-28
Identities = 54/76 (71%), Positives = 65/76 (85%)
Frame = +3
Query: 21 MXXFIXTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 200
M F+ TLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 201 IQKESTLHMVLRLRGG 248
IQKESTLH+VLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 119 bits (287), Expect = 4e-28
Identities = 54/76 (71%), Positives = 65/76 (85%)
Frame = +3
Query: 21 MXXFIXTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 200
M F+ TLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 77 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 201 IQKESTLHMVLRLRGG 248
IQKESTLH+VLRLRGG
Sbjct: 137 IQKESTLHLVLRLRGG 152
Score = 119 bits (287), Expect = 4e-28
Identities = 54/76 (71%), Positives = 65/76 (85%)
Frame = +3
Query: 21 MXXFIXTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 200
M F+ TLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 153 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 201 IQKESTLHMVLRLRGG 248
IQKESTLH+VLRLRGG
Sbjct: 213 IQKESTLHLVLRLRGG 228
Score = 119 bits (287), Expect = 4e-28
Identities = 54/76 (71%), Positives = 65/76 (85%)
Frame = +3
Query: 21 MXXFIXTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 200
M F+ TLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 229 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 201 IQKESTLHMVLRLRGG 248
IQKESTLH+VLRLRGG
Sbjct: 289 IQKESTLHLVLRLRGG 304
Score = 119 bits (287), Expect = 4e-28
Identities = 54/76 (71%), Positives = 65/76 (85%)
Frame = +3
Query: 21 MXXFIXTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 200
M F+ TLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 305 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 201 IQKESTLHMVLRLRGG 248
IQKESTLH+VLRLRGG
Sbjct: 365 IQKESTLHLVLRLRGG 380
Score = 119 bits (287), Expect = 4e-28
Identities = 54/76 (71%), Positives = 65/76 (85%)
Frame = +3
Query: 21 MXXFIXTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 200
M F+ TLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 381 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 440
Query: 201 IQKESTLHMVLRLRGG 248
IQKESTLH+VLRLRGG
Sbjct: 441 IQKESTLHLVLRLRGG 456
Score = 119 bits (287), Expect = 4e-28
Identities = 54/76 (71%), Positives = 65/76 (85%)
Frame = +3
Query: 21 MXXFIXTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 200
M F+ TLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 457 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 516
Query: 201 IQKESTLHMVLRLRGG 248
IQKESTLH+VLRLRGG
Sbjct: 517 IQKESTLHLVLRLRGG 532
Score = 119 bits (287), Expect = 4e-28
Identities = 54/76 (71%), Positives = 65/76 (85%)
Frame = +3
Query: 21 MXXFIXTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 200
M F+ TLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 533 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 592
Query: 201 IQKESTLHMVLRLRGG 248
IQKESTLH+VLRLRGG
Sbjct: 593 IQKESTLHLVLRLRGG 608
Score = 119 bits (287), Expect = 4e-28
Identities = 54/76 (71%), Positives = 65/76 (85%)
Frame = +3
Query: 21 MXXFIXTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 200
M F+ TLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 609 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 668
Query: 201 IQKESTLHMVLRLRGG 248
IQKESTLH+VLRLRGG
Sbjct: 669 IQKESTLHLVLRLRGG 684
Score = 119 bits (287), Expect = 4e-28
Identities = 54/76 (71%), Positives = 65/76 (85%)
Frame = +3
Query: 21 MXXFIXTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 200
M F+ TLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 685 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 744
Query: 201 IQKESTLHMVLRLRGG 248
IQKESTLH+VLRLRGG
Sbjct: 745 IQKESTLHLVLRLRGG 760
Score = 118 bits (284), Expect = 8e-28
Identities = 53/76 (69%), Positives = 65/76 (85%)
Frame = +3
Query: 21 MXXFIXTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 200
M F+ TLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 761 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 820
Query: 201 IQKESTLHMVLRLRGG 248
IQK+STLH+VLRLRGG
Sbjct: 821 IQKQSTLHLVLRLRGG 836
>L31492-1|AAC37252.1| 128|Caenorhabditis elegans
ubiquitin/ribosomal fusion protein protein.
Length = 128
Score = 119 bits (287), Expect = 4e-28
Identities = 54/76 (71%), Positives = 65/76 (85%)
Frame = +3
Query: 21 MXXFIXTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 200
M F+ TLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 201 IQKESTLHMVLRLRGG 248
IQKESTLH+VLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
>Z78420-1|CAB01708.1| 77|Caenorhabditis elegans Hypothetical
protein F45H11.2 protein.
Length = 77
Score = 89.0 bits (211), Expect = 6e-19
Identities = 40/73 (54%), Positives = 52/73 (71%)
Frame = +3
Query: 33 IXTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKE 212
+ TLTGK I + EP + V +K+K+ +KEG+P QQRLIFAGKQ+ D KT ADY +
Sbjct: 5 VKTLTGKEIELDIEPNDRVERIKEKVEEKEGIPPPQQRLIFAGKQMNDDKTAADYKVLGG 64
Query: 213 STLHMVLRLRGGY 251
S LH+VL LRGG+
Sbjct: 65 SVLHLVLALRGGF 77
>AF040645-8|AAB94982.1| 292|Caenorhabditis elegans Hypothetical
protein F52C6.4 protein.
Length = 292
Score = 67.3 bits (157), Expect = 2e-12
Identities = 33/70 (47%), Positives = 44/70 (62%)
Frame = +3
Query: 33 IXTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKE 212
+ TL GKTI + +TV LK K+ +K GVP DQQRLIF QLE+ + + YNI+ E
Sbjct: 165 VKTLFGKTIPISIKNTDTVETLKFKVQNKHGVPPDQQRLIFGRAQLENDRALFAYNIRDE 224
Query: 213 STLHMVLRLR 242
+H+V R R
Sbjct: 225 DIIHLVSRHR 234
Score = 35.5 bits (78), Expect = 0.007
Identities = 20/62 (32%), Positives = 33/62 (53%)
Frame = +3
Query: 42 LTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTL 221
+TG IT E A + DL K+A+ + P ++ +D +T++DYNI+ STL
Sbjct: 98 VTGDPITVEASDA--IKDLNFKVAEAQRKPHQPSNIVLC----KDQRTISDYNIKNGSTL 151
Query: 222 HM 227
+
Sbjct: 152 RL 153
>L16530-1|AAA28161.1| 163|Caenorhabditis elegans
ubiquitin-like:ribosomal proteinfusion protein protein.
Length = 163
Score = 58.0 bits (134), Expect = 1e-09
Identities = 32/73 (43%), Positives = 45/73 (61%)
Frame = +3
Query: 30 FIXTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQK 209
F+ TL +T+ E E V +KQKI EG+P ++QRL +AG+QLEDS D I
Sbjct: 3 FVKTLH-RTLFLEVAANEDVLSIKQKIEAAEGIPAEEQRLCYAGRQLEDS----DCGIDS 57
Query: 210 ESTLHMVLRLRGG 248
E+T+++ L L GG
Sbjct: 58 EATIYVNLELLGG 70
>AC006651-4|AAF39865.1| 163|Caenorhabditis elegans Ubiquitin-like
family protein 1,isoform a protein.
Length = 163
Score = 58.0 bits (134), Expect = 1e-09
Identities = 32/73 (43%), Positives = 45/73 (61%)
Frame = +3
Query: 30 FIXTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQK 209
F+ TL +T+ E E V +KQKI EG+P ++QRL +AG+QLEDS D I
Sbjct: 3 FVKTLH-RTLFLEVAANEDVLSIKQKIEAAEGIPAEEQRLCYAGRQLEDS----DCGIDS 57
Query: 210 ESTLHMVLRLRGG 248
E+T+++ L L GG
Sbjct: 58 EATIYVNLELLGG 70
>M21321-1|AAA28153.1| 37|Caenorhabditis elegans protein (
C.elegans ubiquitin A(UbiA) gene, 5' end. ).
Length = 37
Score = 50.0 bits (114), Expect = 3e-07
Identities = 21/37 (56%), Positives = 28/37 (75%)
Frame = +3
Query: 21 MXXFIXTLTGKTITAETEPAETVADLKQKIADKEGVP 131
M F+ TLTGKTIT E E ++T+ ++K KI DKEG+P
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIP 37
>U80452-4|AAB37860.1| 226|Caenorhabditis elegans Hypothetical
protein C16C8.4 protein.
Length = 226
Score = 49.2 bits (112), Expect = 6e-07
Identities = 23/52 (44%), Positives = 32/52 (61%)
Frame = +3
Query: 81 ETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLR 236
+TV D+K I + +P L F+GK+LED ++ DYNIQK ST+ M R
Sbjct: 173 DTVFDIKNDIEHRHDIPQHSYWLSFSGKRLEDHCSIGDYNIQKSSTITMYFR 224
>U09415-1|AAA82164.1| 655|Caenorhabditis elegans Ceprp21 protein.
Length = 655
Score = 44.8 bits (101), Expect = 1e-05
Identities = 19/69 (27%), Positives = 42/69 (60%)
Frame = +3
Query: 42 LTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTL 221
+ G + + +++LKQ+I D+ G+PV +Q+L+ G ++D+ + A YN+ + +
Sbjct: 584 MDGSIVQFTIQVTAPMSELKQQIQDRYGMPVGKQKLMSDGLFVKDNMSSAFYNLADRTAI 643
Query: 222 HMVLRLRGG 248
++ ++ RGG
Sbjct: 644 YLQVKERGG 652
>AF106576-5|AAC78179.1| 655|Caenorhabditis elegans Yeast prp
(splicing factor) relatedprotein 21 protein.
Length = 655
Score = 44.8 bits (101), Expect = 1e-05
Identities = 19/69 (27%), Positives = 42/69 (60%)
Frame = +3
Query: 42 LTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTL 221
+ G + + +++LKQ+I D+ G+PV +Q+L+ G ++D+ + A YN+ + +
Sbjct: 584 MDGSIVQFTIQVTAPMSELKQQIQDRYGMPVGKQKLMSDGLFVKDNMSSAFYNLADRTAI 643
Query: 222 HMVLRLRGG 248
++ ++ RGG
Sbjct: 644 YLQVKERGG 652
>Z32681-5|CAA83606.1| 341|Caenorhabditis elegans Hypothetical
protein F56F3.4 protein.
Length = 341
Score = 41.9 bits (94), Expect = 9e-05
Identities = 23/67 (34%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Frame = +3
Query: 51 KTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLED-SKTMADYNIQKESTLHM 227
K I E + ETV+ LK +I + V ++Q L+F G +L+D +KTM D I ++ + M
Sbjct: 32 KQIVVEMKDKETVSILKNRIEQETEVLTNRQVLLFKGMELKDNNKTMTDCGINSDAKITM 91
Query: 228 VLRLRGG 248
+++ G
Sbjct: 92 NVKMSTG 98
>U80452-8|AAB37855.1| 244|Caenorhabditis elegans Hypothetical
protein C16C8.13 protein.
Length = 244
Score = 37.1 bits (82), Expect = 0.002
Identities = 18/48 (37%), Positives = 27/48 (56%)
Frame = +3
Query: 78 AETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTL 221
++T+ +K I V + R++ K LED T+A YNIQ+ STL
Sbjct: 192 SDTIRQVKLTINSLANVDISSFRMVLRDKVLEDDHTLAYYNIQEGSTL 239
>AC006651-5|AAM48542.1| 47|Caenorhabditis elegans Ubiquitin-like
family protein 1,isoform b protein.
Length = 47
Score = 37.1 bits (82), Expect = 0.002
Identities = 18/45 (40%), Positives = 27/45 (60%)
Frame = +3
Query: 30 FIXTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGK 164
F+ TL +T+ E E V +KQKI EG+P ++QRL +A +
Sbjct: 3 FVKTLH-RTLFLEVAANEDVLSIKQKIEAAEGIPAEEQRLCYAAR 46
>U80452-6|AAB37858.1| 592|Caenorhabditis elegans Hypothetical
protein C16C8.16 protein.
Length = 592
Score = 35.1 bits (77), Expect = 0.010
Identities = 16/55 (29%), Positives = 31/55 (56%)
Frame = +3
Query: 78 AETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLR 242
++T+ +K +I V + R++ GK LED ++A YNIQ+ + + + L+
Sbjct: 215 SDTIRHIKLRINSLAKVDISSFRMVLRGKLLEDHHSLAYYNIQEGALIWLYSHLK 269
>U80452-10|AAB37853.1| 214|Caenorhabditis elegans Hypothetical
protein C16C8.11 protein.
Length = 214
Score = 34.3 bits (75), Expect = 0.017
Identities = 18/53 (33%), Positives = 27/53 (50%)
Frame = +3
Query: 39 TLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADY 197
++ G+ + E+V LK KI + G+P + L GK L D K +ADY
Sbjct: 149 SMPGRLFSIGANKMESVEQLKMKIECQTGIPRTKFWLRLHGKPLYDDKKLADY 201
>U80452-7|AAB37856.1| 233|Caenorhabditis elegans Hypothetical
protein C16C8.14 protein.
Length = 233
Score = 33.1 bits (72), Expect = 0.039
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +3
Query: 78 AETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTL 221
++T+ +K +I G+ R K LED T+A YNI++ ST+
Sbjct: 181 SDTIRQIKPRINSLAGIDTISFRTFCDDKFLEDDHTLAHYNIREGSTI 228
>Z69904-3|CAA93780.1| 372|Caenorhabditis elegans Hypothetical
protein ZK20.3 protein.
Length = 372
Score = 32.3 bits (70), Expect = 0.069
Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
Frame = +3
Query: 39 TLTGKTITAETEPAETVADLKQKIADKEG--VPVDQQRLIFAGKQLEDSKTMADYNIQKE 212
TLT E +T+A++K +A ++G + Q+LI+ GK L+DS + +
Sbjct: 58 TLTQVNFNLELNEDQTIAEVKALVASEKGDDYAPELQKLIYNGKILDDSVKVGEVGFDSS 117
Query: 213 STLHMVLRLR 242
+ ++L R
Sbjct: 118 KFVVVMLSKR 127
>Z92834-5|CAB07390.1| 402|Caenorhabditis elegans Hypothetical
protein F39B2.10 protein.
Length = 402
Score = 28.7 bits (61), Expect = 0.85
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +3
Query: 33 IXTLTGKTITAETEPAETVADLKQKIADKEGVPV 134
I TL G+TI P E +A K+ EG+P+
Sbjct: 279 ISTLDGRTIFYRVLPGEVIAHADVKVIHNEGMPM 312
>U80452-5|AAB37859.1| 180|Caenorhabditis elegans Hypothetical
protein C16C8.5 protein.
Length = 180
Score = 26.6 bits (56), Expect = 3.4
Identities = 8/32 (25%), Positives = 21/32 (65%)
Frame = +3
Query: 132 VDQQRLIFAGKQLEDSKTMADYNIQKESTLHM 227
V+ L + G++L+D++++ YNI + +++
Sbjct: 124 VESFNLYYGGQKLQDNRSIGSYNIDQSREIYL 155
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical
protein F25H5.4 protein.
Length = 852
Score = 26.2 bits (55), Expect = 4.5
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +3
Query: 42 LTGKTITAETEPAETVADLKQKIADKEGVP 131
L G + A T+P + V D +++ KEGVP
Sbjct: 814 LPGDPLEAGTKPNQIVLDTRKRKGLKEGVP 843
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 26.2 bits (55), Expect = 4.5
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +3
Query: 42 LTGKTITAETEPAETVADLKQKIADKEGVP 131
L G + A T+P + V D +++ KEGVP
Sbjct: 814 LPGDPLEAGTKPNQIVLDTRKRKGLKEGVP 843
>U97016-4|AAN84886.1| 2692|Caenorhabditis elegans Lethal protein
363, isoform b protein.
Length = 2692
Score = 25.8 bits (54), Expect = 6.0
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +3
Query: 39 TLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFA 158
TLTG I ++EP A K + E P + QR++ A
Sbjct: 545 TLTGSLIPPKSEPIGRPASPKAILQKAETDPKELQRIVLA 584
>U97016-3|AAN84885.1| 2695|Caenorhabditis elegans Lethal protein
363, isoform a protein.
Length = 2695
Score = 25.8 bits (54), Expect = 6.0
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +3
Query: 39 TLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFA 158
TLTG I ++EP A K + E P + QR++ A
Sbjct: 545 TLTGSLIPPKSEPIGRPASPKAILQKAETDPKELQRIVLA 584
>Z71185-3|CAA94905.2| 427|Caenorhabditis elegans Hypothetical
protein C35A5.4 protein.
Length = 427
Score = 25.4 bits (53), Expect = 7.9
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = +1
Query: 55 PLPPKRNPQRRWPISSKKLPIKKVCP*INKD 147
P PK+N Q + S KLP K P KD
Sbjct: 358 PKSPKKNSQEKSAPPSPKLPPKTTAPTPTKD 388
>AL161712-22|CAO82055.1| 158|Caenorhabditis elegans Hypothetical
protein Y66D12A.16a protein.
Length = 158
Score = 25.4 bits (53), Expect = 7.9
Identities = 15/55 (27%), Positives = 23/55 (41%)
Frame = +2
Query: 50 QNHYRRNGTRRDGGRSQAKNXXXXXXXXXSTKTYLCGQTIGRFQNYGRLQYSKGI 214
+ H+RRN TRRD A S +T C + F+ +Q+ K +
Sbjct: 90 KEHHRRNETRRDYRSISAVETVHETIKIESRRTVACEGNV-YFEETNVIQFPKNL 143
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,130,996
Number of Sequences: 27780
Number of extensions: 111378
Number of successful extensions: 353
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 323
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 353
length of database: 12,740,198
effective HSP length: 70
effective length of database: 10,795,598
effective search space used: 323867940
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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