Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc29l18
(652 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC021136-1|AAH21136.1| 250|Homo sapiens interferon, gamma-induc... 46 1e-04
AF097362-1|AAF04618.1| 261|Homo sapiens gamma-interferon induci... 46 1e-04
AB049659-1|BAC98466.1| 250|Homo sapiens legumaturain protein. 46 1e-04
BC031020-1|AAH31020.1| 250|Homo sapiens interferon, gamma-induc... 46 2e-04
J03909-1|AAA36105.1| 303|Homo sapiens gamma-interferon-inducibl... 44 6e-04
AL832578-1|CAD89937.1| 641|Homo sapiens hypothetical protein pr... 31 2.7
AY656716-1|AAT73059.1| 778|Homo sapiens MCTP1S protein. 30 6.2
AY656715-1|AAT73058.1| 999|Homo sapiens MCTP1L protein. 30 6.2
AK091330-1|BAC03637.1| 515|Homo sapiens protein ( Homo sapiens ... 30 6.2
AK098373-1|BAC05295.1| 441|Homo sapiens protein ( Homo sapiens ... 30 8.2
>BC021136-1|AAH21136.1| 250|Homo sapiens interferon,
gamma-inducible protein 30 protein.
Length = 250
Score = 46.0 bits (104), Expect = 1e-04
Identities = 21/43 (48%), Positives = 27/43 (62%)
Frame = +1
Query: 514 VKVRVYYEALCPDSKFFFVKNLAPVTEKLSEFLDVTLVPYGKA 642
V V +YYEALC + F ++ L P + E L+VTLVPYG A
Sbjct: 62 VNVTLYYEALCGGCRAFLIRELFPTWLLVMEILNVTLVPYGNA 104
>AF097362-1|AAF04618.1| 261|Homo sapiens gamma-interferon inducible
lysosomal thiol reductase protein.
Length = 261
Score = 46.0 bits (104), Expect = 1e-04
Identities = 21/43 (48%), Positives = 27/43 (62%)
Frame = +1
Query: 514 VKVRVYYEALCPDSKFFFVKNLAPVTEKLSEFLDVTLVPYGKA 642
V V +YYEALC + F ++ L P + E L+VTLVPYG A
Sbjct: 73 VNVTLYYEALCGGCRAFLIRELFPTWLLVMEILNVTLVPYGNA 115
>AB049659-1|BAC98466.1| 250|Homo sapiens legumaturain protein.
Length = 250
Score = 46.0 bits (104), Expect = 1e-04
Identities = 21/43 (48%), Positives = 27/43 (62%)
Frame = +1
Query: 514 VKVRVYYEALCPDSKFFFVKNLAPVTEKLSEFLDVTLVPYGKA 642
V V +YYEALC + F ++ L P + E L+VTLVPYG A
Sbjct: 62 VNVTLYYEALCGGCRAFLIRELFPTWLLVMEILNVTLVPYGNA 104
>BC031020-1|AAH31020.1| 250|Homo sapiens interferon,
gamma-inducible protein 30 protein.
Length = 250
Score = 45.6 bits (103), Expect = 2e-04
Identities = 21/43 (48%), Positives = 27/43 (62%)
Frame = +1
Query: 514 VKVRVYYEALCPDSKFFFVKNLAPVTEKLSEFLDVTLVPYGKA 642
V V +YYEALC + F ++ L P + E L+VTLVPYG A
Sbjct: 62 VNVTLYYEALCGGCQAFLIRELFPTWLLVMEILNVTLVPYGNA 104
>J03909-1|AAA36105.1| 303|Homo sapiens gamma-interferon-inducible
protein precursor protein.
Length = 303
Score = 43.6 bits (98), Expect = 6e-04
Identities = 20/43 (46%), Positives = 26/43 (60%)
Frame = +1
Query: 514 VKVRVYYEALCPDSKFFFVKNLAPVTEKLSEFLDVTLVPYGKA 642
V V +YYEALC + F ++ L P + E L+VT VPYG A
Sbjct: 73 VNVTLYYEALCGGCRAFLIRELFPTWLLVMEILNVTSVPYGNA 115
>AL832578-1|CAD89937.1| 641|Homo sapiens hypothetical protein
protein.
Length = 641
Score = 31.5 bits (68), Expect = 2.7
Identities = 21/69 (30%), Positives = 34/69 (49%)
Frame = -2
Query: 369 YSVSIAVIECHFHSLKSFEHFIKLFLSRSDLSQPLNRSILKKYVIILLIPHNGYLHINKL 190
Y+V I IE F SLK +H + + S+ D+S L K + I + +H+NK
Sbjct: 83 YAVKILEIEDLFSSLKHIQHTLVDYQSQEDISLLLQLVQNKDFQNAFKIHNAITVHMNKA 142
Query: 189 NARLPTIAH 163
+ P I++
Sbjct: 143 SPPFPLISN 151
>AY656716-1|AAT73059.1| 778|Homo sapiens MCTP1S protein.
Length = 778
Score = 30.3 bits (65), Expect = 6.2
Identities = 18/51 (35%), Positives = 30/51 (58%)
Frame = +1
Query: 367 IIVLVLLSLIMWQFFRLIPEKPVALFSESVDTDILELEDDKYNKHKQDKVK 519
+I LVLL L+ W +F +I K ++V D+LE E+++ +K +D K
Sbjct: 604 MIPLVLLLLLTWNYFLIISGKDNRQ-RDTVVEDMLEDEEEEDDKDDKDSEK 653
>AY656715-1|AAT73058.1| 999|Homo sapiens MCTP1L protein.
Length = 999
Score = 30.3 bits (65), Expect = 6.2
Identities = 18/51 (35%), Positives = 30/51 (58%)
Frame = +1
Query: 367 IIVLVLLSLIMWQFFRLIPEKPVALFSESVDTDILELEDDKYNKHKQDKVK 519
+I LVLL L+ W +F +I K ++V D+LE E+++ +K +D K
Sbjct: 825 MIPLVLLLLLTWNYFLIISGKDNRQ-RDTVVEDMLEDEEEEDDKDDKDSEK 874
>AK091330-1|BAC03637.1| 515|Homo sapiens protein ( Homo sapiens
cDNA FLJ34011 fis, clone FCBBF2001868, weakly similar to
RABPHILIN-3A. ).
Length = 515
Score = 30.3 bits (65), Expect = 6.2
Identities = 18/51 (35%), Positives = 30/51 (58%)
Frame = +1
Query: 367 IIVLVLLSLIMWQFFRLIPEKPVALFSESVDTDILELEDDKYNKHKQDKVK 519
+I LVLL L+ W +F +I K ++V D+LE E+++ +K +D K
Sbjct: 341 MIPLVLLLLLTWNYFLIISGKDNRQ-RDTVVEDMLEDEEEEDDKDDKDSEK 390
>AK098373-1|BAC05295.1| 441|Homo sapiens protein ( Homo sapiens
cDNA FLJ25507 fis, clone CBR05244, highly similar to Mus
musculus PALS1 (Pals1) mRNA. ).
Length = 441
Score = 29.9 bits (64), Expect = 8.2
Identities = 21/69 (30%), Positives = 33/69 (47%)
Frame = -2
Query: 369 YSVSIAVIECHFHSLKSFEHFIKLFLSRSDLSQPLNRSILKKYVIILLIPHNGYLHINKL 190
Y+V I IE F SLK +H + S+ D+S L K + I + +H+NK
Sbjct: 117 YAVKILEIEDLFSSLKHIQHTLVDSQSQEDISLLLQLVQNKDFQSAFKIHNAITVHMNKA 176
Query: 189 NARLPTIAH 163
+ P I++
Sbjct: 177 SPPFPLISN 185
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,551,496
Number of Sequences: 237096
Number of extensions: 1560986
Number of successful extensions: 2734
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2640
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2734
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7253890590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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