Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc29l09
(661 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT011327-1|AAR96119.1| 891|Drosophila melanogaster SD22390p pro... 33 0.34
AE014297-4066|AAF56664.3| 979|Drosophila melanogaster CG6124-PA... 33 0.45
U87613-1|AAC33180.1| 1036|Drosophila melanogaster seven-pass mem... 31 1.8
BT003246-1|AAO25003.1| 1036|Drosophila melanogaster LD34308p pro... 31 1.8
AF030334-1|AAB84275.1| 1036|Drosophila melanogaster smoothened p... 31 1.8
AE014134-73|AAF51518.2| 1036|Drosophila melanogaster CG11561-PA ... 31 1.8
AY118814-1|AAM50674.1| 448|Drosophila melanogaster GH23407p pro... 30 3.2
AE014297-134|AAO41500.1| 1372|Drosophila melanogaster CG31531-PC... 30 3.2
AE014297-133|AAF52105.2| 1372|Drosophila melanogaster CG31531-PB... 30 3.2
AE014297-132|AAF52104.2| 1372|Drosophila melanogaster CG31531-PA... 30 3.2
AE014134-2440|AAF53361.2| 448|Drosophila melanogaster CG33115-P... 30 3.2
AF135118-1|AAD31714.1| 3367|Drosophila melanogaster laminin alph... 29 4.2
AE014134-2477|AAF53381.2| 2731|Drosophila melanogaster CG15288-P... 29 4.2
AE014134-2476|AAN10875.1| 3375|Drosophila melanogaster CG15288-P... 29 4.2
AY094730-1|AAM11083.1| 1372|Drosophila melanogaster GH25780p pro... 28 9.8
>BT011327-1|AAR96119.1| 891|Drosophila melanogaster SD22390p
protein.
Length = 891
Score = 33.1 bits (72), Expect = 0.34
Identities = 26/92 (28%), Positives = 37/92 (40%), Gaps = 2/92 (2%)
Frame = +2
Query: 263 CQDGFCNATNALLNAQAPDLIECDPALGLLHIFSAG--GDFVVSQACVSTYRDLVDDTGT 436
C++GFC+A D E D + S G F V+ S +TG
Sbjct: 317 CENGFCDAPE---KCSCNDGYEMDSENRCSPVCSGGCKNGFCVAPEKCSCDEGYSKETGN 373
Query: 437 PRPYLCNNGRLNMNLDTVQFSPDACECSSGYE 532
+C+NG N D +P+ C C+ GYE
Sbjct: 374 SCKPICSNGCENGFCD----APEKCSCNDGYE 401
Score = 31.1 bits (67), Expect = 1.4
Identities = 25/92 (27%), Positives = 36/92 (39%), Gaps = 2/92 (2%)
Frame = +2
Query: 263 CQDGFCNATNALLNAQAPDLIECDPALGLLHIFSAG--GDFVVSQACVSTYRDLVDDTGT 436
C++GFC+A D E D + S G F V+ S +TG
Sbjct: 383 CENGFCDAPE---KCSCNDGYEMDSENRCSPVCSGGCKNGFCVAPGKCSCDEGYSKETGN 439
Query: 437 PRPYLCNNGRLNMNLDTVQFSPDACECSSGYE 532
+C+ G N D +P+ C C+ GYE
Sbjct: 440 SCKPICSKGCENGFCD----APEKCSCNDGYE 467
Score = 31.1 bits (67), Expect = 1.4
Identities = 25/92 (27%), Positives = 36/92 (39%), Gaps = 2/92 (2%)
Frame = +2
Query: 263 CQDGFCNATNALLNAQAPDLIECDPALGLLHIFSAG--GDFVVSQACVSTYRDLVDDTGT 436
C++GFC+A D E D + S G F V+ S +TG
Sbjct: 581 CENGFCDAPE---KCSCNDGYEMDSENRCSPVCSGGCKNGFCVAPGKCSCDEGYSKETGN 637
Query: 437 PRPYLCNNGRLNMNLDTVQFSPDACECSSGYE 532
+C+ G N D +P+ C C+ GYE
Sbjct: 638 SCKPICSKGCENGFCD----APEKCSCNDGYE 665
Score = 30.7 bits (66), Expect = 1.8
Identities = 25/92 (27%), Positives = 35/92 (38%), Gaps = 2/92 (2%)
Frame = +2
Query: 263 CQDGFCNATNALLNAQAPDLIECDPALGLLHIFSAG--GDFVVSQACVSTYRDLVDDTGT 436
C++GFC A D E D + S G F V+ S +TG
Sbjct: 251 CENGFCEAPE---KCSCNDGYEMDSENRCSPVCSGGCKNGFCVAPGKCSCDEGYSKETGN 307
Query: 437 PRPYLCNNGRLNMNLDTVQFSPDACECSSGYE 532
+C+ G N D +P+ C C+ GYE
Sbjct: 308 SCKPICSKGCENGFCD----APEKCSCNDGYE 335
Score = 30.7 bits (66), Expect = 1.8
Identities = 25/92 (27%), Positives = 35/92 (38%), Gaps = 2/92 (2%)
Frame = +2
Query: 263 CQDGFCNATNALLNAQAPDLIECDPALGLLHIFSAG--GDFVVSQACVSTYRDLVDDTGT 436
C++GFC A D E D + S G F V+ S +TG
Sbjct: 515 CENGFCEAPE---KCSCNDGYEMDSENRCSPVCSGGCKNGFCVAPGKCSCDEGYSKETGN 571
Query: 437 PRPYLCNNGRLNMNLDTVQFSPDACECSSGYE 532
+C+ G N D +P+ C C+ GYE
Sbjct: 572 SCKPICSKGCENGFCD----APEKCSCNDGYE 599
Score = 29.5 bits (63), Expect = 4.2
Identities = 24/92 (26%), Positives = 35/92 (38%), Gaps = 2/92 (2%)
Frame = +2
Query: 263 CQDGFCNATNALLNAQAPDLIECDPALGLLHIFSAG--GDFVVSQACVSTYRDLVDDTGT 436
C++GFC A D E D + S G F V+ S +TG
Sbjct: 185 CENGFCEAPE---KCSCNDGYEMDSENRCSPVCSGGCKNGFCVAPGKCSCNEGYSKETGN 241
Query: 437 PRPYLCNNGRLNMNLDTVQFSPDACECSSGYE 532
+C+ G N + +P+ C C+ GYE
Sbjct: 242 SCKPICSKGCENGFCE----APEKCSCNDGYE 269
Score = 29.5 bits (63), Expect = 4.2
Identities = 24/92 (26%), Positives = 36/92 (39%), Gaps = 2/92 (2%)
Frame = +2
Query: 263 CQDGFCNATNALLNAQAPDLIECDPALGLLHIFSAG--GDFVVSQACVSTYRDLVDDTGT 436
C++GFC+A D E D + S G F V+ S +TG
Sbjct: 449 CENGFCDAPE---KCSCNDGYEMDSENRCSPVCSGGCKNGFCVAPGKCSCDEGYSKETGN 505
Query: 437 PRPYLCNNGRLNMNLDTVQFSPDACECSSGYE 532
+C+ G N + +P+ C C+ GYE
Sbjct: 506 SCKPICSKGCENGFCE----APEKCSCNDGYE 533
>AE014297-4066|AAF56664.3| 979|Drosophila melanogaster CG6124-PA
protein.
Length = 979
Score = 32.7 bits (71), Expect = 0.45
Identities = 26/92 (28%), Positives = 37/92 (40%), Gaps = 2/92 (2%)
Frame = +2
Query: 263 CQDGFCNATNALLNAQAPDLIECDPALGLLHIFSAG--GDFVVSQACVSTYRDLVDDTGT 436
C++GFC+A D E D + S G F V+ S +TG
Sbjct: 500 CENGFCDAPE---KCSCNDGYEMDGENRCSPVCSGGCKNGFCVAPEKCSCDEGYSKETGN 556
Query: 437 PRPYLCNNGRLNMNLDTVQFSPDACECSSGYE 532
+C+NG N D +P+ C C+ GYE
Sbjct: 557 SCKPICSNGCENGFCD----APEKCSCNDGYE 584
Score = 31.5 bits (68), Expect = 1.0
Identities = 27/109 (24%), Positives = 39/109 (35%), Gaps = 2/109 (1%)
Frame = +2
Query: 218 CRDNCVISSAASELTCQDGFCNATNALLNAQAPDLIECDPAL--GLLHIFSAGGDFVVSQ 391
C+DNC +A + C + EC P G + D
Sbjct: 162 CKDNC---AAVNGFCAAPNRCECNPGFIPKPKSKSFECQPKCKNGCSNGVCRAPD---KC 215
Query: 392 ACVSTYRDLVDDTGTPRPYLCNNGRLNMNLDTVQFSPDACECSSGYEKM 538
C Y +D P +C NG +N N +PD C+C +GY K+
Sbjct: 216 ECNKFYEKDIDGNCVP---ICENGCVNGNCT----APDVCQCLTGYTKI 257
Score = 31.1 bits (67), Expect = 1.4
Identities = 25/92 (27%), Positives = 36/92 (39%), Gaps = 2/92 (2%)
Frame = +2
Query: 263 CQDGFCNATNALLNAQAPDLIECDPALGLLHIFSAG--GDFVVSQACVSTYRDLVDDTGT 436
C++GFC+A D E D + S G F V+ S +TG
Sbjct: 434 CENGFCDAPE---KCSCNDGYEMDSENRCSPVCSGGCKNGFCVAPGKCSCDEGYSKETGN 490
Query: 437 PRPYLCNNGRLNMNLDTVQFSPDACECSSGYE 532
+C+ G N D +P+ C C+ GYE
Sbjct: 491 SCKPICSKGCENGFCD----APEKCSCNDGYE 518
Score = 30.7 bits (66), Expect = 1.8
Identities = 25/92 (27%), Positives = 36/92 (39%), Gaps = 2/92 (2%)
Frame = +2
Query: 263 CQDGFCNATNALLNAQAPDLIECDPALGLLHIFSAG--GDFVVSQACVSTYRDLVDDTGT 436
C++GFC+A D E D + S G F V+ S +TG
Sbjct: 368 CENGFCDAPE---KCSCNDGYEMDGENRCSPVCSGGCKNGFCVAPGKCSCDEGYSKETGN 424
Query: 437 PRPYLCNNGRLNMNLDTVQFSPDACECSSGYE 532
+C+ G N D +P+ C C+ GYE
Sbjct: 425 SCKPICSKGCENGFCD----APEKCSCNDGYE 452
Score = 30.7 bits (66), Expect = 1.8
Identities = 25/92 (27%), Positives = 36/92 (39%), Gaps = 2/92 (2%)
Frame = +2
Query: 263 CQDGFCNATNALLNAQAPDLIECDPALGLLHIFSAG--GDFVVSQACVSTYRDLVDDTGT 436
C++GFC+A D E D + S G F V+ S +TG
Sbjct: 566 CENGFCDAPE---KCSCNDGYEMDGENRCSPVCSGGCKNGFCVAPGKCSCDEGYSKETGN 622
Query: 437 PRPYLCNNGRLNMNLDTVQFSPDACECSSGYE 532
+C+ G N D +P+ C C+ GYE
Sbjct: 623 SCKPICSKGCENGFCD----APEKCSCNDGYE 650
Score = 30.7 bits (66), Expect = 1.8
Identities = 24/92 (26%), Positives = 36/92 (39%), Gaps = 2/92 (2%)
Frame = +2
Query: 263 CQDGFCNATNALLNAQAPDLIECDPALGLLHIFSAG--GDFVVSQACVSTYRDLVDDTGT 436
C++GFC+A D E D + S G F ++ S +TG
Sbjct: 632 CENGFCDAPE---KCSCNDGYEMDSENRCSPVCSGGCKNGFCIAPGKCSCDEGYSKETGN 688
Query: 437 PRPYLCNNGRLNMNLDTVQFSPDACECSSGYE 532
+C+ G N D +P+ C C+ GYE
Sbjct: 689 SCKPICSKGCENGFCD----APEKCSCNDGYE 716
Score = 29.9 bits (64), Expect = 3.2
Identities = 30/116 (25%), Positives = 41/116 (35%), Gaps = 5/116 (4%)
Frame = +2
Query: 200 CVTDQQCRDNCVISSAASELT--CQDGFCNATNALLN-AQAPDLIECDPALGLLHIFSAG 370
CV +C N + T C+DG N A D E D + S G
Sbjct: 275 CVAPNECSCNAGYTKLEGVCTPVCKDGCVNGFCASPEKCSCNDGYEMDSENRCSPVCSGG 334
Query: 371 --GDFVVSQACVSTYRDLVDDTGTPRPYLCNNGRLNMNLDTVQFSPDACECSSGYE 532
F V+ S + TG +C+ G N D +P+ C C+ GYE
Sbjct: 335 CKNGFCVAPGKCSCDEGYIKGTGNSCKPICSKGCENGFCD----APEKCSCNDGYE 386
Score = 29.5 bits (63), Expect = 4.2
Identities = 24/92 (26%), Positives = 36/92 (39%), Gaps = 2/92 (2%)
Frame = +2
Query: 263 CQDGFCNATNALLNAQAPDLIECDPALGLLHIFSAG--GDFVVSQACVSTYRDLVDDTGT 436
C++GFC+A D E D + S G F V+ S +TG
Sbjct: 698 CENGFCDAPE---KCSCNDGYEMDSENRCSPVCSGGCKNGFCVAPGKCSCDEGYSKETGN 754
Query: 437 PRPYLCNNGRLNMNLDTVQFSPDACECSSGYE 532
+C+ G N + +P+ C C+ GYE
Sbjct: 755 SCKPICSKGCENGFCE----APEKCSCNDGYE 782
>U87613-1|AAC33180.1| 1036|Drosophila melanogaster seven-pass
membrane protein protein.
Length = 1036
Score = 30.7 bits (66), Expect = 1.8
Identities = 21/83 (25%), Positives = 34/83 (40%)
Frame = -1
Query: 646 VDRISYISVVNASIQIGQAIRNAHGDRASQRRLAK*HFFIAARTFARVRRKLHRVQIHIQ 467
VD + + ++ R HG +S RR + +IAA T RR+ + Q
Sbjct: 688 VDSQVSVKIAEMKTKVASRSRGKHGGSSSNRRTQRRRDYIAAATGKSSRRRESSTSVESQ 747
Query: 466 PTIVA*IRPRRSRIVHQVSVRAH 398
++A + H+V V AH
Sbjct: 748 --VIALKKTTYPNASHKVGVFAH 768
>BT003246-1|AAO25003.1| 1036|Drosophila melanogaster LD34308p
protein.
Length = 1036
Score = 30.7 bits (66), Expect = 1.8
Identities = 21/83 (25%), Positives = 34/83 (40%)
Frame = -1
Query: 646 VDRISYISVVNASIQIGQAIRNAHGDRASQRRLAK*HFFIAARTFARVRRKLHRVQIHIQ 467
VD + + ++ R HG +S RR + +IAA T RR+ + Q
Sbjct: 688 VDSQVSVKIAEMKTKVASRSRGKHGGSSSNRRTQRRRDYIAAATGKSSRRRESSTSVESQ 747
Query: 466 PTIVA*IRPRRSRIVHQVSVRAH 398
++A + H+V V AH
Sbjct: 748 --VIALNKTTYPNASHKVGVFAH 768
>AF030334-1|AAB84275.1| 1036|Drosophila melanogaster smoothened
protein.
Length = 1036
Score = 30.7 bits (66), Expect = 1.8
Identities = 21/83 (25%), Positives = 34/83 (40%)
Frame = -1
Query: 646 VDRISYISVVNASIQIGQAIRNAHGDRASQRRLAK*HFFIAARTFARVRRKLHRVQIHIQ 467
VD + + ++ R HG +S RR + +IAA T RR+ + Q
Sbjct: 688 VDSQVSVKIAEMKTKVASRSRGKHGGSSSNRRTQRRRDYIAAATGKSSRRRESSTSVESQ 747
Query: 466 PTIVA*IRPRRSRIVHQVSVRAH 398
++A + H+V V AH
Sbjct: 748 --VIALKKTTYPNASHKVGVFAH 768
>AE014134-73|AAF51518.2| 1036|Drosophila melanogaster CG11561-PA
protein.
Length = 1036
Score = 30.7 bits (66), Expect = 1.8
Identities = 21/83 (25%), Positives = 34/83 (40%)
Frame = -1
Query: 646 VDRISYISVVNASIQIGQAIRNAHGDRASQRRLAK*HFFIAARTFARVRRKLHRVQIHIQ 467
VD + + ++ R HG +S RR + +IAA T RR+ + Q
Sbjct: 688 VDSQVSVKIAEMKTKVASRSRGKHGGSSSNRRTQRRRDYIAAATGKSSRRRESSTSVESQ 747
Query: 466 PTIVA*IRPRRSRIVHQVSVRAH 398
++A + H+V V AH
Sbjct: 748 --VIALKKTTYPNASHKVGVFAH 768
>AY118814-1|AAM50674.1| 448|Drosophila melanogaster GH23407p
protein.
Length = 448
Score = 29.9 bits (64), Expect = 3.2
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +2
Query: 488 VQFSPDACECSSGYEKMLFRQTALARTIPVCIPN 589
V P C C+ GY + L R++A P+CIP+
Sbjct: 220 VCLEPGKCSCAEGYTRGL-RESAALGCQPICIPD 252
>AE014297-134|AAO41500.1| 1372|Drosophila melanogaster CG31531-PC,
isoform C protein.
Length = 1372
Score = 29.9 bits (64), Expect = 3.2
Identities = 25/78 (32%), Positives = 34/78 (43%), Gaps = 1/78 (1%)
Frame = -3
Query: 554 PFGEIAFFHSRSNIRTRPAKIAPCP-NSYSADHCCIDKASAFPYRPPSLCTCSRMLETRQ 378
P ++ F S +N PAKI+PC N +A + K+ P P S M+ +
Sbjct: 617 PLRDMEFSVSCTNNFIEPAKISPCDVNVVAASAVSVSKSGPTP-NPTS---TPNMVSSSP 672
Query: 377 NLRLRRKCEASPVRDRIL 324
N LRRK V R L
Sbjct: 673 NCNLRRKPSNEMVHHRNL 690
>AE014297-133|AAF52105.2| 1372|Drosophila melanogaster CG31531-PB,
isoform B protein.
Length = 1372
Score = 29.9 bits (64), Expect = 3.2
Identities = 25/78 (32%), Positives = 34/78 (43%), Gaps = 1/78 (1%)
Frame = -3
Query: 554 PFGEIAFFHSRSNIRTRPAKIAPCP-NSYSADHCCIDKASAFPYRPPSLCTCSRMLETRQ 378
P ++ F S +N PAKI+PC N +A + K+ P P S M+ +
Sbjct: 617 PLRDMEFSVSCTNNFIEPAKISPCDVNVVAASAVSVSKSGPTP-NPTS---TPNMVSSSP 672
Query: 377 NLRLRRKCEASPVRDRIL 324
N LRRK V R L
Sbjct: 673 NCNLRRKPSNEMVHHRNL 690
>AE014297-132|AAF52104.2| 1372|Drosophila melanogaster CG31531-PA,
isoform A protein.
Length = 1372
Score = 29.9 bits (64), Expect = 3.2
Identities = 25/78 (32%), Positives = 34/78 (43%), Gaps = 1/78 (1%)
Frame = -3
Query: 554 PFGEIAFFHSRSNIRTRPAKIAPCP-NSYSADHCCIDKASAFPYRPPSLCTCSRMLETRQ 378
P ++ F S +N PAKI+PC N +A + K+ P P S M+ +
Sbjct: 617 PLRDMEFSVSCTNNFIEPAKISPCDVNVVAASAVSVSKSGPTP-NPTS---TPNMVSSSP 672
Query: 377 NLRLRRKCEASPVRDRIL 324
N LRRK V R L
Sbjct: 673 NCNLRRKPSNEMVHHRNL 690
>AE014134-2440|AAF53361.2| 448|Drosophila melanogaster CG33115-PA
protein.
Length = 448
Score = 29.9 bits (64), Expect = 3.2
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +2
Query: 488 VQFSPDACECSSGYEKMLFRQTALARTIPVCIPN 589
V P C C+ GY + L R++A P+CIP+
Sbjct: 220 VCLEPGKCSCAEGYTRGL-RESAALGCQPICIPD 252
>AF135118-1|AAD31714.1| 3367|Drosophila melanogaster laminin alpha1,2
protein.
Length = 3367
Score = 29.5 bits (63), Expect = 4.2
Identities = 20/73 (27%), Positives = 25/73 (34%), Gaps = 2/73 (2%)
Frame = -3
Query: 620 CKRVYTNWPSDSECTRGSCEPAPFGEIAFFHSRSNIRTRPAKIAPCPNSYSADHC--CID 447
CKR DS SC+ + + I CP Y+ DHC C D
Sbjct: 899 CKRCACPLSEDSNNFSPSCQLKSYNYMDLNPQFELIEHAEYICTQCPEGYTGDHCQVCDD 958
Query: 446 KASAFPYRPPSLC 408
P +P S C
Sbjct: 959 GYFGNPRQPGSSC 971
>AE014134-2477|AAF53381.2| 2731|Drosophila melanogaster CG15288-PA,
isoform A protein.
Length = 2731
Score = 29.5 bits (63), Expect = 4.2
Identities = 20/73 (27%), Positives = 25/73 (34%), Gaps = 2/73 (2%)
Frame = -3
Query: 620 CKRVYTNWPSDSECTRGSCEPAPFGEIAFFHSRSNIRTRPAKIAPCPNSYSADHC--CID 447
CKR DS SC+ + + I CP Y+ DHC C D
Sbjct: 899 CKRCACPLSEDSNNFSPSCQLKSYNYMDLNPQFELIEHAEYICTQCPEGYTGDHCQVCDD 958
Query: 446 KASAFPYRPPSLC 408
P +P S C
Sbjct: 959 GYFGNPRQPGSSC 971
>AE014134-2476|AAN10875.1| 3375|Drosophila melanogaster CG15288-PB,
isoform B protein.
Length = 3375
Score = 29.5 bits (63), Expect = 4.2
Identities = 20/73 (27%), Positives = 25/73 (34%), Gaps = 2/73 (2%)
Frame = -3
Query: 620 CKRVYTNWPSDSECTRGSCEPAPFGEIAFFHSRSNIRTRPAKIAPCPNSYSADHC--CID 447
CKR DS SC+ + + I CP Y+ DHC C D
Sbjct: 899 CKRCACPLSEDSNNFSPSCQLKSYNYMDLNPQFELIEHAEYICTQCPEGYTGDHCQVCDD 958
Query: 446 KASAFPYRPPSLC 408
P +P S C
Sbjct: 959 GYFGNPRQPGSSC 971
>AY094730-1|AAM11083.1| 1372|Drosophila melanogaster GH25780p
protein.
Length = 1372
Score = 28.3 bits (60), Expect = 9.8
Identities = 24/78 (30%), Positives = 34/78 (43%), Gaps = 1/78 (1%)
Frame = -3
Query: 554 PFGEIAFFHSRSNIRTRPAKIAPCP-NSYSADHCCIDKASAFPYRPPSLCTCSRMLETRQ 378
P ++ F S +N PAKI+PC N +A + K+ P P S M+ +
Sbjct: 617 PLRDMEFSVSCTNNFIEPAKISPCDVNVVAASAVSVSKSGPTP-NPTS---TPNMVSSSP 672
Query: 377 NLRLRRKCEASPVRDRIL 324
N LRR+ V R L
Sbjct: 673 NCNLRREPSNEMVHHRNL 690
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,446,659
Number of Sequences: 53049
Number of extensions: 721833
Number of successful extensions: 2135
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1960
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2135
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2827453950
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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