Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc29l07
         (156 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY070671-1|AAL48142.1|  148|Drosophila melanogaster RH07540p pro...    59   9e-10
AE013599-3413|AAF46862.1|  148|Drosophila melanogaster CG4046-PA...    59   9e-10
AY089671-1|AAL90409.1|  395|Drosophila melanogaster RH44312p pro...    26   6.2  
AE014297-663|AAF54157.3|  395|Drosophila melanogaster CG2957-PA ...    26   6.2  

>AY070671-1|AAL48142.1|  148|Drosophila melanogaster RH07540p
           protein.
          Length = 148

 Score = 58.8 bits (136), Expect = 9e-10
 Identities = 24/24 (100%), Positives = 24/24 (100%)
 Frame = +3

Query: 6   DPRRCEPKKFGGPGARARYQKSYR 77
           DPRRCEPKKFGGPGARARYQKSYR
Sbjct: 125 DPRRCEPKKFGGPGARARYQKSYR 148


>AE013599-3413|AAF46862.1|  148|Drosophila melanogaster CG4046-PA
           protein.
          Length = 148

 Score = 58.8 bits (136), Expect = 9e-10
 Identities = 24/24 (100%), Positives = 24/24 (100%)
 Frame = +3

Query: 6   DPRRCEPKKFGGPGARARYQKSYR 77
           DPRRCEPKKFGGPGARARYQKSYR
Sbjct: 125 DPRRCEPKKFGGPGARARYQKSYR 148


>AY089671-1|AAL90409.1|  395|Drosophila melanogaster RH44312p
           protein.
          Length = 395

 Score = 26.2 bits (55), Expect = 6.2
 Identities = 12/19 (63%), Positives = 13/19 (68%)
 Frame = +3

Query: 6   DPRRCEPKKFGGPGARARY 62
           D RR E KKFG  GAR +Y
Sbjct: 372 DYRRRERKKFGQEGARRKY 390


>AE014297-663|AAF54157.3|  395|Drosophila melanogaster CG2957-PA
           protein.
          Length = 395

 Score = 26.2 bits (55), Expect = 6.2
 Identities = 12/19 (63%), Positives = 13/19 (68%)
 Frame = +3

Query: 6   DPRRCEPKKFGGPGARARY 62
           D RR E KKFG  GAR +Y
Sbjct: 372 DYRRRERKKFGQEGARRKY 390


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,726,703
Number of Sequences: 53049
Number of extensions: 105456
Number of successful extensions: 217
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 217
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 217
length of database: 24,988,368
effective HSP length: 32
effective length of database: 23,290,800
effective search space used: 442525200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)