Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc29l01
(650 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z83113-1|CAB05543.1| 733|Caenorhabditis elegans Hypothetical pr... 34 0.10
AF016513-1|AAB69446.1| 733|Caenorhabditis elegans Ce-LEA protein. 34 0.10
AL021466-1|CAA16282.1| 308|Caenorhabditis elegans Hypothetical ... 31 0.94
AF068718-3|AAO21430.1| 82|Caenorhabditis elegans Cystatin-like... 31 0.94
Z81113-2|CAB03279.1| 510|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z70783-1|CAA94852.2| 765|Caenorhabditis elegans Hypothetical pr... 28 5.0
Z22181-5|CAA80183.1| 619|Caenorhabditis elegans Hypothetical pr... 28 5.0
AC024801-9|AAF59653.3| 791|Caenorhabditis elegans Hypothetical ... 28 6.6
Z93391-9|CAB07683.2| 392|Caenorhabditis elegans Hypothetical pr... 27 8.7
Z81498-4|CAL63995.1| 392|Caenorhabditis elegans Hypothetical pr... 27 8.7
>Z83113-1|CAB05543.1| 733|Caenorhabditis elegans Hypothetical
protein K08H10.1 protein.
Length = 733
Score = 33.9 bits (74), Expect = 0.10
Identities = 20/69 (28%), Positives = 33/69 (47%)
Frame = +3
Query: 393 SKDAFFIALKKAGILYGNVQDYVVEKTPVVIKTIEEYAPGLVDNVQSYASTAWSGLKKYS 572
+KD +KAG D V EK + + + ++ DNV++ AS A++ K +
Sbjct: 550 AKDKSKSLTEKAGDAISGAYDSVKEKASDIADSFKAHSTNSKDNVENKASDAYNSAKDKA 609
Query: 573 SDYYQITTD 599
SD + T D
Sbjct: 610 SDAWDKTKD 618
>AF016513-1|AAB69446.1| 733|Caenorhabditis elegans Ce-LEA protein.
Length = 733
Score = 33.9 bits (74), Expect = 0.10
Identities = 20/69 (28%), Positives = 33/69 (47%)
Frame = +3
Query: 393 SKDAFFIALKKAGILYGNVQDYVVEKTPVVIKTIEEYAPGLVDNVQSYASTAWSGLKKYS 572
+KD +KAG D V EK + + + ++ DNV++ AS A++ K +
Sbjct: 550 AKDKSKSLTEKAGDAISGAYDSVKEKASDIADSFKAHSTNSKDNVENKASDAYNSAKDKA 609
Query: 573 SDYYQITTD 599
SD + T D
Sbjct: 610 SDAWDKTKD 618
>AL021466-1|CAA16282.1| 308|Caenorhabditis elegans Hypothetical
protein VF36H2L.1 protein.
Length = 308
Score = 30.7 bits (66), Expect = 0.94
Identities = 16/48 (33%), Positives = 27/48 (56%)
Frame = +3
Query: 285 WQKTLSTSARGYLWLETNAPVYYAQTVEICRPYTQLSKDAFFIALKKA 428
W +L S+ +L L T P + ++ +C +LS+ A+F+ LKKA
Sbjct: 42 WLVSLLFSSLAWLGLSTVLPDTFLLSLTVCIIAQELSRVAYFMLLKKA 89
>AF068718-3|AAO21430.1| 82|Caenorhabditis elegans Cystatin-like
protease inhibitorprotein 1, isoform b protein.
Length = 82
Score = 30.7 bits (66), Expect = 0.94
Identities = 17/62 (27%), Positives = 31/62 (50%)
Frame = +3
Query: 231 TTGKLFKDLGILEHSQQAWQKTLSTSARGYLWLETNAPVYYAQTVEICRPYTQLSKDAFF 410
T G + +D E+S +AW+ + + N P YYA +++C PY + ++D
Sbjct: 23 TGGSVEQDASQKEYSDKAWKAVKGINDQA----SNNGPYYYAP-IKVCDPYERGAEDRTA 77
Query: 411 IA 416
+A
Sbjct: 78 LA 79
>Z81113-2|CAB03279.1| 510|Caenorhabditis elegans Hypothetical
protein T03F6.2 protein.
Length = 510
Score = 29.1 bits (62), Expect = 2.9
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
Frame = +3
Query: 147 WASFVLLVSIAGLVAYDVSRAGGNFPK---STTGKLFKDLGILEHSQQ 281
W+SF S A L YD+++A F K F+D+G E ++Q
Sbjct: 178 WSSFSTTRSFAWLDHYDITQASNRFESRQIDQENKKFRDVGKQERNEQ 225
>Z70783-1|CAA94852.2| 765|Caenorhabditis elegans Hypothetical
protein ZK856.1 protein.
Length = 765
Score = 28.3 bits (60), Expect = 5.0
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +3
Query: 225 KSTTGKLFKDLGILEHSQQAWQKTLSTSARGYLWLETNAP 344
K G L +LG+LE+ A +K R +LE N+P
Sbjct: 200 KKICGNLLNELGVLEYMVYADKKLEEEQQRAKRYLEMNSP 239
>Z22181-5|CAA80183.1| 619|Caenorhabditis elegans Hypothetical
protein ZK632.6 protein.
Length = 619
Score = 28.3 bits (60), Expect = 5.0
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = +3
Query: 96 FKDILDRMTSTRRNPWLWASFVLLVSIAGLVAYDV 200
F+ I+D +T PWLWA ++L V + LVA V
Sbjct: 468 FQQIID---ATNEKPWLWAVYILCV-LLPLVAIGV 498
>AC024801-9|AAF59653.3| 791|Caenorhabditis elegans Hypothetical
protein Y50D7A.1 protein.
Length = 791
Score = 27.9 bits (59), Expect = 6.6
Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Frame = -1
Query: 575 TRVLFESAP--GRRCIALNVVYKTRSILFNGFNNDRR 471
+RV+ SAP C A V + T+ ILF G +N RR
Sbjct: 183 SRVIISSAPYPSAMCYASLVTWGTQLILFGGNDNRRR 219
>Z93391-9|CAB07683.2| 392|Caenorhabditis elegans Hypothetical
protein W04G5.7 protein.
Length = 392
Score = 27.5 bits (58), Expect = 8.7
Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Frame = -1
Query: 647 KYLWGPITNKNFSNQIVSCDLIIVTRVLFESAPGRRCIALNVVYK--TRSILFNGFNND 477
K+LW ITN + + I + I ++ V + S P + N+ + + F GFN D
Sbjct: 334 KWLWQNITNCDLTVVIALYEHIWISYVYYPSVPSEPGWSCNICFDDGEKYFFFAGFNLD 392
>Z81498-4|CAL63995.1| 392|Caenorhabditis elegans Hypothetical
protein W04G5.7 protein.
Length = 392
Score = 27.5 bits (58), Expect = 8.7
Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Frame = -1
Query: 647 KYLWGPITNKNFSNQIVSCDLIIVTRVLFESAPGRRCIALNVVYK--TRSILFNGFNND 477
K+LW ITN + + I + I ++ V + S P + N+ + + F GFN D
Sbjct: 334 KWLWQNITNCDLTVVIALYEHIWISYVYYPSVPSEPGWSCNICFDDGEKYFFFAGFNLD 392
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,902,057
Number of Sequences: 27780
Number of extensions: 349136
Number of successful extensions: 881
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 852
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 881
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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