Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc29k22
         (386 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X67681-1|CAA47913.1|  339|Drosophila melanogaster ORF protein.         29   1.6  
U33463-1|AAC47095.1|  345|Drosophila melanogaster transposase pr...    29   2.1  
AE013599-3664|AAF47046.2| 1324|Drosophila melanogaster CG30183-P...    29   2.1  
BT003642-1|AAO39646.1| 1324|Drosophila melanogaster AT15782p pro...    27   6.4  

>X67681-1|CAA47913.1|  339|Drosophila melanogaster ORF protein.
          Length = 339

 Score = 29.5 bits (63), Expect = 1.6
 Identities = 13/44 (29%), Positives = 24/44 (54%), Gaps = 4/44 (9%)
 Frame = +2

Query: 32  WPSSSPDVNPLDLKLWSVLEDMAC----SKGRGDILSLKNLWSK 151
           WP  SPD+N ++  +W+ +++        K  G I+ +  +WSK
Sbjct: 267 WPPQSPDLNIIE-NVWAFIKNQRTIDKNRKREGAIIEIAEIWSK 309


>U33463-1|AAC47095.1|  345|Drosophila melanogaster transposase
           protein.
          Length = 345

 Score = 29.1 bits (62), Expect = 2.1
 Identities = 13/45 (28%), Positives = 21/45 (46%)
 Frame = +2

Query: 35  PSSSPDVNPLDLKLWSVLEDMACSKGRGDILSLKNLWSKQWRNFP 169
           P  SPD+NP++  LW+ L+     +G      L     ++W   P
Sbjct: 273 PPQSPDLNPIE-NLWAYLKKKVAKRGPKTRQQLMAAIIEEWEKIP 316


>AE013599-3664|AAF47046.2| 1324|Drosophila melanogaster CG30183-PA
           protein.
          Length = 1324

 Score = 29.1 bits (62), Expect = 2.1
 Identities = 12/21 (57%), Positives = 14/21 (66%), Gaps = 1/21 (4%)
 Frame = +2

Query: 116 GDILSLKNLWSKQWRNF-PWK 175
           G   S K +WS+QWRN  PWK
Sbjct: 280 GGQASQKFIWSEQWRNLSPWK 300


>BT003642-1|AAO39646.1| 1324|Drosophila melanogaster AT15782p
           protein.
          Length = 1324

 Score = 27.5 bits (58), Expect = 6.4
 Identities = 11/21 (52%), Positives = 13/21 (61%), Gaps = 1/21 (4%)
 Frame = +2

Query: 116 GDILSLKNLWSKQWRNF-PWK 175
           G   S K +W +QWRN  PWK
Sbjct: 280 GGQASQKFIWGEQWRNLSPWK 300


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,418,861
Number of Sequences: 53049
Number of extensions: 245946
Number of successful extensions: 941
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 936
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 941
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1066083345
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)