Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc29k19
         (682 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT004494-1|AAO42658.1| 1113|Drosophila melanogaster GH24302p pro...    33   0.36 
AE014296-2185|AAN11856.1| 1047|Drosophila melanogaster CG32106-P...    33   0.36 
AY052127-1|AAK93551.1| 1062|Drosophila melanogaster SD07741p pro...    29   4.5  
BT025818-1|ABF85718.1| 1416|Drosophila melanogaster IP03271p pro...    29   7.8  
BT010019-1|AAQ22488.1| 1506|Drosophila melanogaster RE10624p pro...    29   7.8  
AY058638-1|AAL13867.1|  492|Drosophila melanogaster LD33732p pro...    29   7.8  
AY051935-1|AAK93359.1|  721|Drosophila melanogaster LD41558p pro...    29   7.8  
AE014298-952|AAF46200.2| 1571|Drosophila melanogaster CG3126-PA,...    29   7.8  
AE014298-951|AAO41635.1| 1520|Drosophila melanogaster CG3126-PB,...    29   7.8  
AE014296-326|AAF47543.2| 1062|Drosophila melanogaster CG7971-PA,...    29   7.8  
AE014296-325|AAZ66051.1|  849|Drosophila melanogaster CG7971-PD,...    29   7.8  
AE014296-324|AAF47542.2| 1107|Drosophila melanogaster CG7971-PC,...    29   7.8  
AE014134-2486|AAF53389.1|  721|Drosophila melanogaster CG7516-PA...    29   7.8  

>BT004494-1|AAO42658.1| 1113|Drosophila melanogaster GH24302p
           protein.
          Length = 1113

 Score = 33.1 bits (72), Expect = 0.36
 Identities = 17/48 (35%), Positives = 26/48 (54%)
 Frame = +1

Query: 4   SHVPVPFTSRPYKNPSRMQRPLIVNHIHQK*RPANMQRNREPKRHDNR 147
           SH  + F+S+  K+P R +   I+N I     P N  RN+  +R+ NR
Sbjct: 386 SHSSLKFSSKTNKSPQRNKVKQIINKIQD--MPRNQTRNKRKQRNKNR 431


>AE014296-2185|AAN11856.1| 1047|Drosophila melanogaster CG32106-PA
           protein.
          Length = 1047

 Score = 33.1 bits (72), Expect = 0.36
 Identities = 17/48 (35%), Positives = 26/48 (54%)
 Frame = +1

Query: 4   SHVPVPFTSRPYKNPSRMQRPLIVNHIHQK*RPANMQRNREPKRHDNR 147
           SH  + F+S+  K+P R +   I+N I     P N  RN+  +R+ NR
Sbjct: 268 SHSSLKFSSKTNKSPQRNKVKQIINKIQD--MPRNQTRNKRKQRNKNR 313


>AY052127-1|AAK93551.1| 1062|Drosophila melanogaster SD07741p
           protein.
          Length = 1062

 Score = 29.5 bits (63), Expect = 4.5
 Identities = 26/98 (26%), Positives = 45/98 (45%), Gaps = 3/98 (3%)
 Frame = +1

Query: 25  TSRPYKNPSRMQRPLIVNHIHQK*RPANMQRNREPKRHDNRPLRVQKIRKIVKSAQII-V 201
           T R  +N    +R         K R  +  R R  +R  ++  ++ K R+ +K  Q    
Sbjct: 526 TDRSKENQRSNERQRSKERQRSKERERSKDRQRSRERRRSKERQLSKDRQGLKERQRSNE 585

Query: 202 KVVSKEAEGDEE--RSRENRVTRRPLGQKLLQKNPKNR 309
           +  SKE +  +E  RSRE + +R PL  K  Q++ + +
Sbjct: 586 RKRSKERQPSKEKQRSRERQRSREPLQSKDRQRSKERQ 623


>BT025818-1|ABF85718.1| 1416|Drosophila melanogaster IP03271p protein.
          Length = 1416

 Score = 28.7 bits (61), Expect = 7.8
 Identities = 17/75 (22%), Positives = 37/75 (49%)
 Frame = +1

Query: 10   VPVPFTSRPYKNPSRMQRPLIVNHIHQK*RPANMQRNREPKRHDNRPLRVQKIRKIVKSA 189
            +  P      + P+   RPL+   +H+  +PAN+  + E +R D   + +  + ++  + 
Sbjct: 951  ITTPQVLEEQEEPTAESRPLVA--VHESVKPANVDEDEEAERAD---MLINMLEEVNITR 1005

Query: 190  QIIVKVVSKEAEGDE 234
             +I+K   +E +G E
Sbjct: 1006 YLILK--KREEDGPE 1018


>BT010019-1|AAQ22488.1| 1506|Drosophila melanogaster RE10624p protein.
          Length = 1506

 Score = 28.7 bits (61), Expect = 7.8
 Identities = 17/75 (22%), Positives = 37/75 (49%)
 Frame = +1

Query: 10   VPVPFTSRPYKNPSRMQRPLIVNHIHQK*RPANMQRNREPKRHDNRPLRVQKIRKIVKSA 189
            +  P      + P+   RPL+   +H+  +PAN+  + E +R D   + +  + ++  + 
Sbjct: 1106 ITTPQVLEEQEEPTAESRPLVA--VHESVKPANVDEDEEAERAD---MLINMLEEVNITR 1160

Query: 190  QIIVKVVSKEAEGDE 234
             +I+K   +E +G E
Sbjct: 1161 YLILK--KREEDGPE 1173


>AY058638-1|AAL13867.1|  492|Drosophila melanogaster LD33732p
           protein.
          Length = 492

 Score = 28.7 bits (61), Expect = 7.8
 Identities = 26/98 (26%), Positives = 45/98 (45%), Gaps = 3/98 (3%)
 Frame = +1

Query: 25  TSRPYKNPSRMQRPLIVNHIHQK*RPANMQRNREPKRHDNRPLRVQKIRKIVKSAQII-V 201
           T R  +N    +R         K R  +  R R  +R  ++  ++ K R+ +K  Q    
Sbjct: 169 TDRSKENQRSNERQRSKERQRSKERERSKDRQRSRERRRSKEGQLSKDRQGLKERQRSNE 228

Query: 202 KVVSKEAEGDEE--RSRENRVTRRPLGQKLLQKNPKNR 309
           +  SKE +  +E  RSRE + +R PL  K  Q++ + +
Sbjct: 229 RKRSKERQPSKEKQRSRERQRSREPLQSKDRQRSKERQ 266


>AY051935-1|AAK93359.1|  721|Drosophila melanogaster LD41558p
           protein.
          Length = 721

 Score = 28.7 bits (61), Expect = 7.8
 Identities = 11/34 (32%), Positives = 22/34 (64%)
 Frame = +1

Query: 76  NHIHQK*RPANMQRNREPKRHDNRPLRVQKIRKI 177
           +  H K R A M+++RE +R   RP++  +++K+
Sbjct: 685 SQFHAKKREAEMKKHREERRSIVRPIKSLRLKKV 718


>AE014298-952|AAF46200.2| 1571|Drosophila melanogaster CG3126-PA,
            isoform A protein.
          Length = 1571

 Score = 28.7 bits (61), Expect = 7.8
 Identities = 17/75 (22%), Positives = 37/75 (49%)
 Frame = +1

Query: 10   VPVPFTSRPYKNPSRMQRPLIVNHIHQK*RPANMQRNREPKRHDNRPLRVQKIRKIVKSA 189
            +  P      + P+   RPL+   +H+  +PAN+  + E +R D   + +  + ++  + 
Sbjct: 1106 ITTPQVLEEQEEPTAESRPLVA--VHESVKPANVDEDEEAERAD---MLINMLEEVNITR 1160

Query: 190  QIIVKVVSKEAEGDE 234
             +I+K   +E +G E
Sbjct: 1161 YLILK--KREEDGPE 1173


>AE014298-951|AAO41635.1| 1520|Drosophila melanogaster CG3126-PB,
            isoform B protein.
          Length = 1520

 Score = 28.7 bits (61), Expect = 7.8
 Identities = 17/75 (22%), Positives = 37/75 (49%)
 Frame = +1

Query: 10   VPVPFTSRPYKNPSRMQRPLIVNHIHQK*RPANMQRNREPKRHDNRPLRVQKIRKIVKSA 189
            +  P      + P+   RPL+   +H+  +PAN+  + E +R D   + +  + ++  + 
Sbjct: 1055 ITTPQVLEEQEEPTAESRPLVA--VHESVKPANVDEDEEAERAD---MLINMLEEVNITR 1109

Query: 190  QIIVKVVSKEAEGDE 234
             +I+K   +E +G E
Sbjct: 1110 YLILK--KREEDGPE 1122


>AE014296-326|AAF47543.2| 1062|Drosophila melanogaster CG7971-PA,
           isoform A protein.
          Length = 1062

 Score = 28.7 bits (61), Expect = 7.8
 Identities = 26/98 (26%), Positives = 45/98 (45%), Gaps = 3/98 (3%)
 Frame = +1

Query: 25  TSRPYKNPSRMQRPLIVNHIHQK*RPANMQRNREPKRHDNRPLRVQKIRKIVKSAQII-V 201
           T R  +N    +R         K R  +  R R  +R  ++  ++ K R+ +K  Q    
Sbjct: 526 TDRSKENQRSNERQRSKERQRSKERERSKDRQRSRERRRSKEGQLSKDRQGLKERQRSNE 585

Query: 202 KVVSKEAEGDEE--RSRENRVTRRPLGQKLLQKNPKNR 309
           +  SKE +  +E  RSRE + +R PL  K  Q++ + +
Sbjct: 586 RKRSKERQPSKEKQRSRERQRSREPLQSKDRQRSKERQ 623


>AE014296-325|AAZ66051.1|  849|Drosophila melanogaster CG7971-PD,
           isoform D protein.
          Length = 849

 Score = 28.7 bits (61), Expect = 7.8
 Identities = 26/98 (26%), Positives = 45/98 (45%), Gaps = 3/98 (3%)
 Frame = +1

Query: 25  TSRPYKNPSRMQRPLIVNHIHQK*RPANMQRNREPKRHDNRPLRVQKIRKIVKSAQII-V 201
           T R  +N    +R         K R  +  R R  +R  ++  ++ K R+ +K  Q    
Sbjct: 526 TDRSKENQRSNERQRSKERQRSKERERSKDRQRSRERRRSKEGQLSKDRQGLKERQRSNE 585

Query: 202 KVVSKEAEGDEE--RSRENRVTRRPLGQKLLQKNPKNR 309
           +  SKE +  +E  RSRE + +R PL  K  Q++ + +
Sbjct: 586 RKRSKERQPSKEKQRSRERQRSREPLQSKDRQRSKERQ 623


>AE014296-324|AAF47542.2| 1107|Drosophila melanogaster CG7971-PC,
           isoform C protein.
          Length = 1107

 Score = 28.7 bits (61), Expect = 7.8
 Identities = 26/98 (26%), Positives = 45/98 (45%), Gaps = 3/98 (3%)
 Frame = +1

Query: 25  TSRPYKNPSRMQRPLIVNHIHQK*RPANMQRNREPKRHDNRPLRVQKIRKIVKSAQII-V 201
           T R  +N    +R         K R  +  R R  +R  ++  ++ K R+ +K  Q    
Sbjct: 526 TDRSKENQRSNERQRSKERQRSKERERSKDRQRSRERRRSKEGQLSKDRQGLKERQRSNE 585

Query: 202 KVVSKEAEGDEE--RSRENRVTRRPLGQKLLQKNPKNR 309
           +  SKE +  +E  RSRE + +R PL  K  Q++ + +
Sbjct: 586 RKRSKERQPSKEKQRSRERQRSREPLQSKDRQRSKERQ 623


>AE014134-2486|AAF53389.1|  721|Drosophila melanogaster CG7516-PA
           protein.
          Length = 721

 Score = 28.7 bits (61), Expect = 7.8
 Identities = 11/34 (32%), Positives = 22/34 (64%)
 Frame = +1

Query: 76  NHIHQK*RPANMQRNREPKRHDNRPLRVQKIRKI 177
           +  H K R A M+++RE +R   RP++  +++K+
Sbjct: 685 SQFHAKKREAEMKKHREERRSIVRPIKSLRLKKV 718


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,176,302
Number of Sequences: 53049
Number of extensions: 687431
Number of successful extensions: 1634
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1569
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1630
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2971922400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)