Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc29k08
(688 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X82782-1|CAA58023.1| 271|Drosophila melanogaster ribosomal prot... 237 8e-63
AY089570-1|AAL90308.1| 271|Drosophila melanogaster RE05022p pro... 237 8e-63
AE014298-903|AAF46169.1| 271|Drosophila melanogaster CG3314-PD,... 237 8e-63
AE014298-902|AAN09172.1| 271|Drosophila melanogaster CG3314-PC,... 237 8e-63
AE014298-901|AAN09170.1| 271|Drosophila melanogaster CG3314-PA,... 237 8e-63
AF208396-1|AAF20209.1| 127|Drosophila melanogaster Hoi-polloi p... 56 5e-08
AE014134-1677|AAF52798.2| 127|Drosophila melanogaster CG3949-PA... 56 5e-08
BT023752-1|AAZ41760.1| 160|Drosophila melanogaster RH66170p pro... 41 0.002
AF217228-1|AAF27630.1| 160|Drosophila melanogaster nucleolar pr... 41 0.002
AE014296-2434|AAF49701.1| 160|Drosophila melanogaster CG5258-PA... 41 0.002
M89628-1|AAB00734.1| 661|Drosophila melanogaster retinal degene... 33 0.48
BT015959-1|AAV36844.1| 603|Drosophila melanogaster RH46370p pro... 33 0.48
AE014296-3312|AAF49044.2| 603|Drosophila melanogaster CG6571-PA... 33 0.48
AE014296-3311|AAO41219.1| 661|Drosophila melanogaster CG6571-PD... 33 0.48
AE014296-3310|AAO41218.1| 661|Drosophila melanogaster CG6571-PC... 33 0.48
AE014296-3309|AAO41217.1| 661|Drosophila melanogaster CG6571-PB... 33 0.48
AY058343-1|AAL13572.1| 403|Drosophila melanogaster GH11867p pro... 29 6.0
AE014297-1960|AAN13634.1| 403|Drosophila melanogaster CG31344-P... 29 6.0
>X82782-1|CAA58023.1| 271|Drosophila melanogaster ribosomal protein
L7a protein.
Length = 271
Score = 237 bits (581), Expect = 8e-63
Identities = 112/160 (70%), Positives = 127/160 (79%)
Frame = +3
Query: 189 NPLFEKRPKNFAIGQGIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLD 368
N LFEKRPKNF IGQ +QP RDLSRFVRWPKYIR+QRQKAVLQ+RLKVPPPI+QF+QTLD
Sbjct: 34 NQLFEKRPKNFGIGQNVQPKRDLSRFVRWPKYIRVQRQKAVLQKRLKVPPPIHQFSQTLD 93
Query: 369 KTTAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXXXXXXXXXRPNTIRSGTNTVTKLVE 548
KTTA LFK+LEKYRPE+ +P+ + +GTNTVTKL+E
Sbjct: 94 KTTAVKLFKLLEKYRPESALAKNVRLKKIAEAKAKGKDVEPKKKPSYVSAGTNTVTKLIE 153
Query: 549 KKKAQLVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKS 668
+KKAQLVVIAHDVDP+ELVLFLPALCRKMGVPYCIVKGK+
Sbjct: 154 QKKAQLVVIAHDVDPLELVLFLPALCRKMGVPYCIVKGKA 193
>AY089570-1|AAL90308.1| 271|Drosophila melanogaster RE05022p
protein.
Length = 271
Score = 237 bits (581), Expect = 8e-63
Identities = 112/160 (70%), Positives = 127/160 (79%)
Frame = +3
Query: 189 NPLFEKRPKNFAIGQGIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLD 368
N LFEKRPKNF IGQ +QP RDLSRFVRWPKYIR+QRQKAVLQ+RLKVPPPI+QF+QTLD
Sbjct: 34 NQLFEKRPKNFGIGQNVQPKRDLSRFVRWPKYIRVQRQKAVLQKRLKVPPPIHQFSQTLD 93
Query: 369 KTTAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXXXXXXXXXRPNTIRSGTNTVTKLVE 548
KTTA LFK+LEKYRPE+ +P+ + +GTNTVTKL+E
Sbjct: 94 KTTAVKLFKLLEKYRPESPLAKKLRLKKIAEAKAKGKDVEPKKKPSYVSAGTNTVTKLIE 153
Query: 549 KKKAQLVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKS 668
+KKAQLVVIAHDVDP+ELVLFLPALCRKMGVPYCIVKGK+
Sbjct: 154 QKKAQLVVIAHDVDPLELVLFLPALCRKMGVPYCIVKGKA 193
>AE014298-903|AAF46169.1| 271|Drosophila melanogaster CG3314-PD,
isoform D protein.
Length = 271
Score = 237 bits (581), Expect = 8e-63
Identities = 112/160 (70%), Positives = 127/160 (79%)
Frame = +3
Query: 189 NPLFEKRPKNFAIGQGIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLD 368
N LFEKRPKNF IGQ +QP RDLSRFVRWPKYIR+QRQKAVLQ+RLKVPPPI+QF+QTLD
Sbjct: 34 NQLFEKRPKNFGIGQNVQPKRDLSRFVRWPKYIRVQRQKAVLQKRLKVPPPIHQFSQTLD 93
Query: 369 KTTAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXXXXXXXXXRPNTIRSGTNTVTKLVE 548
KTTA LFK+LEKYRPE+ +P+ + +GTNTVTKL+E
Sbjct: 94 KTTAVKLFKLLEKYRPESPLAKKLRLKKIAEAKAKGKDVEPKKKPSYVSAGTNTVTKLIE 153
Query: 549 KKKAQLVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKS 668
+KKAQLVVIAHDVDP+ELVLFLPALCRKMGVPYCIVKGK+
Sbjct: 154 QKKAQLVVIAHDVDPLELVLFLPALCRKMGVPYCIVKGKA 193
>AE014298-902|AAN09172.1| 271|Drosophila melanogaster CG3314-PC,
isoform C protein.
Length = 271
Score = 237 bits (581), Expect = 8e-63
Identities = 112/160 (70%), Positives = 127/160 (79%)
Frame = +3
Query: 189 NPLFEKRPKNFAIGQGIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLD 368
N LFEKRPKNF IGQ +QP RDLSRFVRWPKYIR+QRQKAVLQ+RLKVPPPI+QF+QTLD
Sbjct: 34 NQLFEKRPKNFGIGQNVQPKRDLSRFVRWPKYIRVQRQKAVLQKRLKVPPPIHQFSQTLD 93
Query: 369 KTTAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXXXXXXXXXRPNTIRSGTNTVTKLVE 548
KTTA LFK+LEKYRPE+ +P+ + +GTNTVTKL+E
Sbjct: 94 KTTAVKLFKLLEKYRPESPLAKKLRLKKIAEAKAKGKDVEPKKKPSYVSAGTNTVTKLIE 153
Query: 549 KKKAQLVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKS 668
+KKAQLVVIAHDVDP+ELVLFLPALCRKMGVPYCIVKGK+
Sbjct: 154 QKKAQLVVIAHDVDPLELVLFLPALCRKMGVPYCIVKGKA 193
>AE014298-901|AAN09170.1| 271|Drosophila melanogaster CG3314-PA,
isoform A protein.
Length = 271
Score = 237 bits (581), Expect = 8e-63
Identities = 112/160 (70%), Positives = 127/160 (79%)
Frame = +3
Query: 189 NPLFEKRPKNFAIGQGIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLD 368
N LFEKRPKNF IGQ +QP RDLSRFVRWPKYIR+QRQKAVLQ+RLKVPPPI+QF+QTLD
Sbjct: 34 NQLFEKRPKNFGIGQNVQPKRDLSRFVRWPKYIRVQRQKAVLQKRLKVPPPIHQFSQTLD 93
Query: 369 KTTAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXXXXXXXXXRPNTIRSGTNTVTKLVE 548
KTTA LFK+LEKYRPE+ +P+ + +GTNTVTKL+E
Sbjct: 94 KTTAVKLFKLLEKYRPESPLAKKLRLKKIAEAKAKGKDVEPKKKPSYVSAGTNTVTKLIE 153
Query: 549 KKKAQLVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKS 668
+KKAQLVVIAHDVDP+ELVLFLPALCRKMGVPYCIVKGK+
Sbjct: 154 QKKAQLVVIAHDVDPLELVLFLPALCRKMGVPYCIVKGKA 193
>AF208396-1|AAF20209.1| 127|Drosophila melanogaster Hoi-polloi
protein.
Length = 127
Score = 56.0 bits (129), Expect = 5e-08
Identities = 25/61 (40%), Positives = 34/61 (55%)
Frame = +3
Query: 504 NTIRSGTNTVTKLVEKKKAQLVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSPPRGT 683
N +R G N TK + + A +VV+A D +PIE++L LP LC VPY V+ K
Sbjct: 32 NQLRKGANEATKTLNRGLADIVVLAGDAEPIEILLHLPLLCEDKNVPYVFVRSKQALGRA 91
Query: 684 C 686
C
Sbjct: 92 C 92
>AE014134-1677|AAF52798.2| 127|Drosophila melanogaster CG3949-PA
protein.
Length = 127
Score = 56.0 bits (129), Expect = 5e-08
Identities = 25/61 (40%), Positives = 34/61 (55%)
Frame = +3
Query: 504 NTIRSGTNTVTKLVEKKKAQLVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSPPRGT 683
N +R G N TK + + A +VV+A D +PIE++L LP LC VPY V+ K
Sbjct: 32 NQLRKGANEATKTLNRGLADIVVLAGDAEPIEILLHLPLLCEDKNVPYVFVRSKQALGRA 91
Query: 684 C 686
C
Sbjct: 92 C 92
>BT023752-1|AAZ41760.1| 160|Drosophila melanogaster RH66170p
protein.
Length = 160
Score = 40.7 bits (91), Expect = 0.002
Identities = 15/46 (32%), Positives = 28/46 (60%)
Frame = +3
Query: 510 IRSGTNTVTKLVEKKKAQLVVIAHDVDPIELVLFLPALCRKMGVPY 647
+R+G V + K + + + A DV P++++ LPA+C + G+PY
Sbjct: 67 LRNGLKDVQTRLRKGETGICIFAGDVTPVDIMCHLPAVCEEKGIPY 112
>AF217228-1|AAF27630.1| 160|Drosophila melanogaster nucleolar
protein NHP2 protein.
Length = 160
Score = 40.7 bits (91), Expect = 0.002
Identities = 15/46 (32%), Positives = 28/46 (60%)
Frame = +3
Query: 510 IRSGTNTVTKLVEKKKAQLVVIAHDVDPIELVLFLPALCRKMGVPY 647
+R+G V + K + + + A DV P++++ LPA+C + G+PY
Sbjct: 67 LRNGLKDVQTRLRKGETGICIFAGDVTPVDIMCHLPAVCEEKGIPY 112
>AE014296-2434|AAF49701.1| 160|Drosophila melanogaster CG5258-PA
protein.
Length = 160
Score = 40.7 bits (91), Expect = 0.002
Identities = 15/46 (32%), Positives = 28/46 (60%)
Frame = +3
Query: 510 IRSGTNTVTKLVEKKKAQLVVIAHDVDPIELVLFLPALCRKMGVPY 647
+R+G V + K + + + A DV P++++ LPA+C + G+PY
Sbjct: 67 LRNGLKDVQTRLRKGETGICIFAGDVTPVDIMCHLPAVCEEKGIPY 112
>M89628-1|AAB00734.1| 661|Drosophila melanogaster retinal
degeneration C protein protein.
Length = 661
Score = 32.7 bits (71), Expect = 0.48
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +3
Query: 498 RPNTIRSGTNTVTKLVEKKKAQLVVIAHDVDPIE 599
RP+ ++ T+ VT L +K +V+ HD+DP +
Sbjct: 617 RPSVAKTATDPVTLLADKISKNTLVVEHDIDPTD 650
>BT015959-1|AAV36844.1| 603|Drosophila melanogaster RH46370p
protein.
Length = 603
Score = 32.7 bits (71), Expect = 0.48
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +3
Query: 498 RPNTIRSGTNTVTKLVEKKKAQLVVIAHDVDPIE 599
RP+ ++ T+ VT L +K +V+ HD+DP +
Sbjct: 559 RPSVAKTATDPVTLLADKISKNTLVVEHDIDPTD 592
>AE014296-3312|AAF49044.2| 603|Drosophila melanogaster CG6571-PA,
isoform A protein.
Length = 603
Score = 32.7 bits (71), Expect = 0.48
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +3
Query: 498 RPNTIRSGTNTVTKLVEKKKAQLVVIAHDVDPIE 599
RP+ ++ T+ VT L +K +V+ HD+DP +
Sbjct: 559 RPSVAKTATDPVTLLADKISKNTLVVEHDIDPTD 592
>AE014296-3311|AAO41219.1| 661|Drosophila melanogaster CG6571-PD,
isoform D protein.
Length = 661
Score = 32.7 bits (71), Expect = 0.48
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +3
Query: 498 RPNTIRSGTNTVTKLVEKKKAQLVVIAHDVDPIE 599
RP+ ++ T+ VT L +K +V+ HD+DP +
Sbjct: 617 RPSVAKTATDPVTLLADKISKNTLVVEHDIDPTD 650
>AE014296-3310|AAO41218.1| 661|Drosophila melanogaster CG6571-PC,
isoform C protein.
Length = 661
Score = 32.7 bits (71), Expect = 0.48
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +3
Query: 498 RPNTIRSGTNTVTKLVEKKKAQLVVIAHDVDPIE 599
RP+ ++ T+ VT L +K +V+ HD+DP +
Sbjct: 617 RPSVAKTATDPVTLLADKISKNTLVVEHDIDPTD 650
>AE014296-3309|AAO41217.1| 661|Drosophila melanogaster CG6571-PB,
isoform B protein.
Length = 661
Score = 32.7 bits (71), Expect = 0.48
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +3
Query: 498 RPNTIRSGTNTVTKLVEKKKAQLVVIAHDVDPIE 599
RP+ ++ T+ VT L +K +V+ HD+DP +
Sbjct: 617 RPSVAKTATDPVTLLADKISKNTLVVEHDIDPTD 650
>AY058343-1|AAL13572.1| 403|Drosophila melanogaster GH11867p
protein.
Length = 403
Score = 29.1 bits (62), Expect = 6.0
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = -2
Query: 267 QIWTSHELAECPDQWQSSLASSRREDSRSSWA 172
Q W +H +A+ ++ +S+A+ RR SRSS A
Sbjct: 143 QAWYNHNIADRGSRFWTSIAAVRRAHSRSSHA 174
>AE014297-1960|AAN13634.1| 403|Drosophila melanogaster CG31344-PA
protein.
Length = 403
Score = 29.1 bits (62), Expect = 6.0
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = -2
Query: 267 QIWTSHELAECPDQWQSSLASSRREDSRSSWA 172
Q W +H +A+ ++ +S+A+ RR SRSS A
Sbjct: 143 QAWYNHNIADRGSRFWTSIAAVRRAHSRSSHA 174
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,409,326
Number of Sequences: 53049
Number of extensions: 561036
Number of successful extensions: 2014
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1867
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2001
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 3013199100
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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