Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc29k01
         (696 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2 prot...    23   3.2  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   3.2  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    22   5.5  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    22   5.5  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    22   5.5  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    22   5.5  

>AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2
           protein.
          Length = 377

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 12/42 (28%), Positives = 20/42 (47%), Gaps = 5/42 (11%)
 Frame = +2

Query: 548 SDQLIIFVEYWASLIADESEY-----KKTVCFMYNLSLIKVY 658
           +D++I +V  WA    D+ EY        +C   N + + VY
Sbjct: 23  TDKVICYVASWAIYRPDKGEYHPKNIDPNICTHINYAFLGVY 64


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = -1

Query: 525 FFLLTIKDISC*YGFFYVFV 466
           F + T+  + C Y F+Y F+
Sbjct: 89  FIIFTVHFLLCTYYFYYAFI 108


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 9/45 (20%), Positives = 19/45 (42%)
 Frame = +1

Query: 436 LSRLPAPAAIHENVKKSILTANVFDCEQKKLPKIKDPQRPAYNFR 570
           ++ LP+P +   +     +  NV + +    P    P +P Y  +
Sbjct: 406 IANLPSPGSDQRSTPSPRVYGNVNENQDCSTPTENSPTKPYYKLK 450


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +1

Query: 286 LPLDKNHPNYKEKPCLTLNQDNVLL 360
           LP+ K+H   K  PC+ L   +V+L
Sbjct: 20  LPVKKHHRLEKLVPCVYLTSFSVVL 44


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -2

Query: 398 IVLVRTCACDKPSRRTLSW 342
           +V+V   AC   S++T+SW
Sbjct: 293 LVMVTCDACTIASKQTISW 311


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -2

Query: 398 IVLVRTCACDKPSRRTLSW 342
           +V+V   AC   S++T+SW
Sbjct: 293 LVMVTCDACTIASKQTISW 311


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,395
Number of Sequences: 336
Number of extensions: 3820
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18322480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)