Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc29k01
         (696 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ205685-1|ABA27099.1|  423|Homo sapiens mitochondrial ribosomal...    37   0.060
BC000041-1|AAH00041.1|  423|Homo sapiens mitochondrial ribosomal...    37   0.060
AL357673-2|CAH73897.1|  423|Homo sapiens mitochondrial ribosomal...    37   0.060
AL161644-8|CAI23564.1|  423|Homo sapiens mitochondrial ribosomal...    37   0.060
AF325707-1|AAG52881.1|  423|Homo sapiens ribosomal protein L2 pr...    37   0.060

>DQ205685-1|ABA27099.1|  423|Homo sapiens mitochondrial ribosomal
           protein L37 protein.
          Length = 423

 Score = 37.1 bits (82), Expect = 0.060
 Identities = 28/73 (38%), Positives = 39/73 (53%)
 Frame = +1

Query: 274 YEQPLPLDKNHPNYKEKPCLTLNQDNVLLEGLSQAQVLTKTIIAQDKLPPKIEELSRLPA 453
           Y  P PL + HP YK++ C   +    LLEG+ QA  LTKT + +  LP K+  LS +  
Sbjct: 88  YRSP-PLHE-HPLYKDQACYIFHHRCRLLEGVKQALWLTKTKLIEG-LPEKV--LSLVDD 142

Query: 454 PAAIHENVKKSIL 492
           P    EN  + +L
Sbjct: 143 PRNHIENQDECVL 155


>BC000041-1|AAH00041.1|  423|Homo sapiens mitochondrial ribosomal
           protein L37 protein.
          Length = 423

 Score = 37.1 bits (82), Expect = 0.060
 Identities = 28/73 (38%), Positives = 39/73 (53%)
 Frame = +1

Query: 274 YEQPLPLDKNHPNYKEKPCLTLNQDNVLLEGLSQAQVLTKTIIAQDKLPPKIEELSRLPA 453
           Y  P PL + HP YK++ C   +    LLEG+ QA  LTKT + +  LP K+  LS +  
Sbjct: 88  YRSP-PLHE-HPLYKDQACYIFHHRCRLLEGVKQALWLTKTKLIEG-LPEKV--LSLVDD 142

Query: 454 PAAIHENVKKSIL 492
           P    EN  + +L
Sbjct: 143 PRNHIENQDECVL 155


>AL357673-2|CAH73897.1|  423|Homo sapiens mitochondrial ribosomal
           protein L37 protein.
          Length = 423

 Score = 37.1 bits (82), Expect = 0.060
 Identities = 28/73 (38%), Positives = 39/73 (53%)
 Frame = +1

Query: 274 YEQPLPLDKNHPNYKEKPCLTLNQDNVLLEGLSQAQVLTKTIIAQDKLPPKIEELSRLPA 453
           Y  P PL + HP YK++ C   +    LLEG+ QA  LTKT + +  LP K+  LS +  
Sbjct: 88  YRSP-PLHE-HPLYKDQACYIFHHRCRLLEGVKQALWLTKTKLIEG-LPEKV--LSLVDD 142

Query: 454 PAAIHENVKKSIL 492
           P    EN  + +L
Sbjct: 143 PRNHIENQDECVL 155


>AL161644-8|CAI23564.1|  423|Homo sapiens mitochondrial ribosomal
           protein L37 protein.
          Length = 423

 Score = 37.1 bits (82), Expect = 0.060
 Identities = 28/73 (38%), Positives = 39/73 (53%)
 Frame = +1

Query: 274 YEQPLPLDKNHPNYKEKPCLTLNQDNVLLEGLSQAQVLTKTIIAQDKLPPKIEELSRLPA 453
           Y  P PL + HP YK++ C   +    LLEG+ QA  LTKT + +  LP K+  LS +  
Sbjct: 88  YRSP-PLHE-HPLYKDQACYIFHHRCRLLEGVKQALWLTKTKLIEG-LPEKV--LSLVDD 142

Query: 454 PAAIHENVKKSIL 492
           P    EN  + +L
Sbjct: 143 PRNHIENQDECVL 155


>AF325707-1|AAG52881.1|  423|Homo sapiens ribosomal protein L2
           protein.
          Length = 423

 Score = 37.1 bits (82), Expect = 0.060
 Identities = 28/73 (38%), Positives = 39/73 (53%)
 Frame = +1

Query: 274 YEQPLPLDKNHPNYKEKPCLTLNQDNVLLEGLSQAQVLTKTIIAQDKLPPKIEELSRLPA 453
           Y  P PL + HP YK++ C   +    LLEG+ QA  LTKT + +  LP K+  LS +  
Sbjct: 88  YRSP-PLHE-HPLYKDQACYIFHHRCRLLEGVKQALWLTKTKLIEG-LPEKV--LSLVDD 142

Query: 454 PAAIHENVKKSIL 492
           P    EN  + +L
Sbjct: 143 PRNHIENQDECVL 155


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,524,433
Number of Sequences: 237096
Number of extensions: 1996861
Number of successful extensions: 3620
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3524
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3618
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8007229802
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)