Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc29k01
(696 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z93393-6|CAB07691.2| 495|Caenorhabditis elegans Hypothetical pr... 40 0.001
Z81581-2|CAD56595.1| 672|Caenorhabditis elegans Hypothetical pr... 29 3.2
U58745-2|AAU05593.1| 569|Caenorhabditis elegans Hypothetical pr... 29 4.2
U58745-1|AAB00620.2| 574|Caenorhabditis elegans Hypothetical pr... 29 4.2
Z78417-12|CAO78731.1| 318|Caenorhabditis elegans Hypothetical p... 28 7.3
Z78417-11|CAE17739.1| 294|Caenorhabditis elegans Hypothetical p... 28 7.3
Z46267-15|CAI79255.1| 1100|Caenorhabditis elegans Hypothetical p... 28 7.3
Z46267-14|CAI79254.1| 1030|Caenorhabditis elegans Hypothetical p... 28 7.3
Z46267-11|CAA86426.1| 611|Caenorhabditis elegans Hypothetical p... 28 7.3
Z46267-10|CAA86425.1| 581|Caenorhabditis elegans Hypothetical p... 28 7.3
Z46267-6|CAA86428.2| 1215|Caenorhabditis elegans Hypothetical pr... 28 7.3
Z50016-10|CAL22699.1| 264|Caenorhabditis elegans Hypothetical p... 27 9.7
Z50016-6|CAC42350.1| 448|Caenorhabditis elegans Hypothetical pr... 27 9.7
Z50016-1|CAA90318.1| 1106|Caenorhabditis elegans Hypothetical pr... 27 9.7
U49795-1|AAB03859.1| 673|Caenorhabditis elegans DNA-binding pro... 27 9.7
U49794-1|AAB03858.1| 673|Caenorhabditis elegans lag-1 protein. 27 9.7
AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase... 27 9.7
AF151645-1|AAD42387.1| 264|Caenorhabditis elegans ionotropic GA... 27 9.7
AF151644-1|AAD42386.1| 448|Caenorhabditis elegans ionotropic GA... 27 9.7
AF100663-8|AAM98006.1| 671|Caenorhabditis elegans Lin-12 and gl... 27 9.7
AF100663-7|AAC68978.3| 673|Caenorhabditis elegans Lin-12 and gl... 27 9.7
AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying de... 27 9.7
AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying de... 27 9.7
>Z93393-6|CAB07691.2| 495|Caenorhabditis elegans Hypothetical
protein Y48E1B.5 protein.
Length = 495
Score = 40.3 bits (90), Expect = 0.001
Identities = 30/101 (29%), Positives = 48/101 (47%), Gaps = 1/101 (0%)
Frame = +1
Query: 247 REHIQIIGPYEQPLPLDKNHPNYKEKPCLTLNQDNVLLEGLSQAQVLTKTIIAQDKLPPK 426
+EH++ + +P + HP K P + +G++QA VLT++++A LP
Sbjct: 69 KEHMENELKFTEP---PQQHPLQKSHPAYIFEAAEPMSDGIAQAAVLTRSVVATGGLPDT 125
Query: 427 IEELSRLPAPAAIHEN-VKKSILTANVFDCEQKKLPKIKDP 546
I L A I E VK +IL ++ +KLP DP
Sbjct: 126 I--LLNSAAKLEIDEEMVKDAILHGERYNPSLEKLPARFDP 164
>Z81581-2|CAD56595.1| 672|Caenorhabditis elegans Hypothetical
protein F08A10.1c protein.
Length = 672
Score = 29.1 bits (62), Expect = 3.2
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = +1
Query: 166 TGVEKKLKDMGIEVQDALEFVKGKREEREHIQIIGPYEQP 285
T +E +L D+ E+ E ++G E+R+ +IG P
Sbjct: 617 TAIEHQLSDISRELSSLAELLRGSNEQRKKSVVIGGESAP 656
>U58745-2|AAU05593.1| 569|Caenorhabditis elegans Hypothetical
protein C10G6.1b protein.
Length = 569
Score = 28.7 bits (61), Expect = 4.2
Identities = 21/78 (26%), Positives = 42/78 (53%), Gaps = 5/78 (6%)
Frame = +1
Query: 130 HWLVQGKRIPIDTGVEKKLKDMGIEVQDA---LEFVKGKREEREHIQIIGPY--EQPLPL 294
+++V+G R+ + E + IE+ D L VK K+ E+++ + +QP+PL
Sbjct: 151 YFVVEGDRVRLKNMPEPD--ENAIEMDDEGRPLAGVKAKQAAVEYLKSVLEQNEDQPIPL 208
Query: 295 DKNHPNYKEKPCLTLNQD 348
D+ + N+ ++ T+ QD
Sbjct: 209 DQFYQNFCQRFSHTIRQD 226
>U58745-1|AAB00620.2| 574|Caenorhabditis elegans Hypothetical
protein C10G6.1a protein.
Length = 574
Score = 28.7 bits (61), Expect = 4.2
Identities = 21/78 (26%), Positives = 42/78 (53%), Gaps = 5/78 (6%)
Frame = +1
Query: 130 HWLVQGKRIPIDTGVEKKLKDMGIEVQDA---LEFVKGKREEREHIQIIGPY--EQPLPL 294
+++V+G R+ + E + IE+ D L VK K+ E+++ + +QP+PL
Sbjct: 151 YFVVEGDRVRLKNMPEPD--ENAIEMDDEGRPLAGVKAKQAAVEYLKSVLEQNEDQPIPL 208
Query: 295 DKNHPNYKEKPCLTLNQD 348
D+ + N+ ++ T+ QD
Sbjct: 209 DQFYQNFCQRFSHTIRQD 226
>Z78417-12|CAO78731.1| 318|Caenorhabditis elegans Hypothetical
protein C35C5.10b protein.
Length = 318
Score = 27.9 bits (59), Expect = 7.3
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = -3
Query: 259 VCVRVLPVFLLRIQEHLEPQYPY 191
V + V+PV+L+ IQ EP+ PY
Sbjct: 183 VAILVVPVYLMYIQGAFEPEKPY 205
>Z78417-11|CAE17739.1| 294|Caenorhabditis elegans Hypothetical
protein C35C5.10a protein.
Length = 294
Score = 27.9 bits (59), Expect = 7.3
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = -3
Query: 259 VCVRVLPVFLLRIQEHLEPQYPY 191
V + V+PV+L+ IQ EP+ PY
Sbjct: 159 VAILVVPVYLMYIQGAFEPEKPY 181
>Z46267-15|CAI79255.1| 1100|Caenorhabditis elegans Hypothetical
protein F49E2.5j protein.
Length = 1100
Score = 27.9 bits (59), Expect = 7.3
Identities = 27/114 (23%), Positives = 50/114 (43%), Gaps = 4/114 (3%)
Frame = +1
Query: 157 PIDTGVEKKLKDMGIEVQDALEFVKGKREEREHIQII--GPYEQPLP-LDKNHPNYKEKP 327
P+ K K + D L+FV K E ++ P E+ + + +N P
Sbjct: 312 PVQAEAPKSKKPTADDNMDFLDFVTAKEEPKDEPAETPAAPVEEVVENVVENVVEKSTTP 371
Query: 328 CLTLNQD-NVLLEGLSQAQVLTKTIIAQDKLPPKIEELSRLPAPAAIHENVKKS 486
T N+ N + S+++ +T+ + PP++E++ PA+ EN KK+
Sbjct: 372 PATENKKKNKKDKKKSESEKVTEQPVESAPAPPQVEQVVETTPPAS--ENKKKN 423
>Z46267-14|CAI79254.1| 1030|Caenorhabditis elegans Hypothetical
protein F49E2.5i protein.
Length = 1030
Score = 27.9 bits (59), Expect = 7.3
Identities = 27/114 (23%), Positives = 50/114 (43%), Gaps = 4/114 (3%)
Frame = +1
Query: 157 PIDTGVEKKLKDMGIEVQDALEFVKGKREEREHIQII--GPYEQPLP-LDKNHPNYKEKP 327
P+ K K + D L+FV K E ++ P E+ + + +N P
Sbjct: 312 PVQAEAPKSKKPTADDNMDFLDFVTAKEEPKDEPAETPAAPVEEVVENVVENVVEKSTTP 371
Query: 328 CLTLNQD-NVLLEGLSQAQVLTKTIIAQDKLPPKIEELSRLPAPAAIHENVKKS 486
T N+ N + S+++ +T+ + PP++E++ PA+ EN KK+
Sbjct: 372 PATENKKKNKKDKKKSESEKVTEQPVESAPAPPQVEQVVETTPPAS--ENKKKN 423
>Z46267-11|CAA86426.1| 611|Caenorhabditis elegans Hypothetical
protein F49E2.5f protein.
Length = 611
Score = 27.9 bits (59), Expect = 7.3
Identities = 27/114 (23%), Positives = 50/114 (43%), Gaps = 4/114 (3%)
Frame = +1
Query: 157 PIDTGVEKKLKDMGIEVQDALEFVKGKREEREHIQII--GPYEQPLP-LDKNHPNYKEKP 327
P+ K K + D L+FV K E ++ P E+ + + +N P
Sbjct: 312 PVQAEAPKSKKPTADDNMDFLDFVTAKEEPKDEPAETPAAPVEEVVENVVENVVEKSTTP 371
Query: 328 CLTLNQD-NVLLEGLSQAQVLTKTIIAQDKLPPKIEELSRLPAPAAIHENVKKS 486
T N+ N + S+++ +T+ + PP++E++ PA+ EN KK+
Sbjct: 372 PATENKKKNKKDKKKSESEKVTEQPVESAPAPPQVEQVVETTPPAS--ENKKKN 423
>Z46267-10|CAA86425.1| 581|Caenorhabditis elegans Hypothetical
protein F49E2.5e protein.
Length = 581
Score = 27.9 bits (59), Expect = 7.3
Identities = 27/114 (23%), Positives = 50/114 (43%), Gaps = 4/114 (3%)
Frame = +1
Query: 157 PIDTGVEKKLKDMGIEVQDALEFVKGKREEREHIQII--GPYEQPLP-LDKNHPNYKEKP 327
P+ K K + D L+FV K E ++ P E+ + + +N P
Sbjct: 312 PVQAEAPKSKKPTADDNMDFLDFVTAKEEPKDEPAETPAAPVEEVVENVVENVVEKSTTP 371
Query: 328 CLTLNQD-NVLLEGLSQAQVLTKTIIAQDKLPPKIEELSRLPAPAAIHENVKKS 486
T N+ N + S+++ +T+ + PP++E++ PA+ EN KK+
Sbjct: 372 PATENKKKNKKDKKKSESEKVTEQPVESAPAPPQVEQVVETTPPAS--ENKKKN 423
>Z46267-6|CAA86428.2| 1215|Caenorhabditis elegans Hypothetical
protein F49E2.5a protein.
Length = 1215
Score = 27.9 bits (59), Expect = 7.3
Identities = 27/114 (23%), Positives = 50/114 (43%), Gaps = 4/114 (3%)
Frame = +1
Query: 157 PIDTGVEKKLKDMGIEVQDALEFVKGKREEREHIQII--GPYEQPLP-LDKNHPNYKEKP 327
P+ K K + D L+FV K E ++ P E+ + + +N P
Sbjct: 312 PVQAEAPKSKKPTADDNMDFLDFVTAKEEPKDEPAETPAAPVEEVVENVVENVVEKSTTP 371
Query: 328 CLTLNQD-NVLLEGLSQAQVLTKTIIAQDKLPPKIEELSRLPAPAAIHENVKKS 486
T N+ N + S+++ +T+ + PP++E++ PA+ EN KK+
Sbjct: 372 PATENKKKNKKDKKKSESEKVTEQPVESAPAPPQVEQVVETTPPAS--ENKKKN 423
>Z50016-10|CAL22699.1| 264|Caenorhabditis elegans Hypothetical
protein T21C12.1h protein.
Length = 264
Score = 27.5 bits (58), Expect = 9.7
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +3
Query: 348 QRPS*RFIASAGPN*NYNSSRQTSSKNRRTITTTSSGCYSRKR 476
+ P+ A N +S + T +RT+ +TSSG YSR R
Sbjct: 19 KEPNCSTAVKADANIELSSYKFTKICQKRTLASTSSGTYSRLR 61
>Z50016-6|CAC42350.1| 448|Caenorhabditis elegans Hypothetical
protein T21C12.1f protein.
Length = 448
Score = 27.5 bits (58), Expect = 9.7
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +3
Query: 348 QRPS*RFIASAGPN*NYNSSRQTSSKNRRTITTTSSGCYSRKR 476
+ P+ A N +S + T +RT+ +TSSG YSR R
Sbjct: 203 KEPNCSTAVKADANIELSSYKFTKICQKRTLASTSSGTYSRLR 245
>Z50016-1|CAA90318.1| 1106|Caenorhabditis elegans Hypothetical
protein T21C12.1a protein.
Length = 1106
Score = 27.5 bits (58), Expect = 9.7
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +3
Query: 348 QRPS*RFIASAGPN*NYNSSRQTSSKNRRTITTTSSGCYSRKR 476
+ P+ A N +S + T +RT+ +TSSG YSR R
Sbjct: 861 KEPNCSTAVKADANIELSSYKFTKICQKRTLASTSSGTYSRLR 903
>U49795-1|AAB03859.1| 673|Caenorhabditis elegans DNA-binding
protein LAG-1 protein.
Length = 673
Score = 27.5 bits (58), Expect = 9.7
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = +1
Query: 358 LEGLSQAQVLTKTIIAQDKLPPKIEELSRLPAPAAIHENVKKSILT 495
+ L Q Q L + Q+ L PKI+ +S+ P P + K+ L+
Sbjct: 64 IAALQQIQALMTFQMQQNNLFPKIDTISKSPTPELASPSAKRMRLS 109
>U49794-1|AAB03858.1| 673|Caenorhabditis elegans lag-1 protein.
Length = 673
Score = 27.5 bits (58), Expect = 9.7
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = +1
Query: 358 LEGLSQAQVLTKTIIAQDKLPPKIEELSRLPAPAAIHENVKKSILT 495
+ L Q Q L + Q+ L PKI+ +S+ P P + K+ L+
Sbjct: 64 IAALQQIQALMTFQMQQNNLFPKIDTISKSPTPELASPSAKRMRLS 109
>AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase C
beta homolog EGL-8 protein.
Length = 1431
Score = 27.5 bits (58), Expect = 9.7
Identities = 19/67 (28%), Positives = 35/67 (52%)
Frame = +3
Query: 261 NYRTLRTTVTFRQESSKL*RETVSHAKPRQRPS*RFIASAGPN*NYNSSRQTSSKNRRTI 440
N+ +LR ++F++ S L + +H + Q S + A P+ + TSS + +I
Sbjct: 620 NFSSLRQKLSFKRRQSPLAGDQRAHPEVEQPVS--SSSPATPSISGPPPCATSSGSTSSI 677
Query: 441 TTTSSGC 461
T T++GC
Sbjct: 678 TITTTGC 684
>AF151645-1|AAD42387.1| 264|Caenorhabditis elegans ionotropic GABA
receptor subunitUNC-49Cshort protein.
Length = 264
Score = 27.5 bits (58), Expect = 9.7
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +3
Query: 348 QRPS*RFIASAGPN*NYNSSRQTSSKNRRTITTTSSGCYSRKR 476
+ P+ A N +S + T +RT+ +TSSG YSR R
Sbjct: 19 KEPNCSTAVKADANIELSSYKFTKICQKRTLASTSSGTYSRLR 61
>AF151644-1|AAD42386.1| 448|Caenorhabditis elegans ionotropic GABA
receptor subunitUNC-49C protein.
Length = 448
Score = 27.5 bits (58), Expect = 9.7
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +3
Query: 348 QRPS*RFIASAGPN*NYNSSRQTSSKNRRTITTTSSGCYSRKR 476
+ P+ A N +S + T +RT+ +TSSG YSR R
Sbjct: 203 KEPNCSTAVKADANIELSSYKFTKICQKRTLASTSSGTYSRLR 245
>AF100663-8|AAM98006.1| 671|Caenorhabditis elegans Lin-12 and glp-1
phenotype protein1, isoform b protein.
Length = 671
Score = 27.5 bits (58), Expect = 9.7
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = +1
Query: 358 LEGLSQAQVLTKTIIAQDKLPPKIEELSRLPAPAAIHENVKKSILT 495
+ L Q Q L + Q+ L PKI+ +S+ P P + K+ L+
Sbjct: 62 IAALQQIQALMTFQMQQNNLFPKIDTISKSPTPELASPSAKRMRLS 107
>AF100663-7|AAC68978.3| 673|Caenorhabditis elegans Lin-12 and glp-1
phenotype protein1, isoform a protein.
Length = 673
Score = 27.5 bits (58), Expect = 9.7
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = +1
Query: 358 LEGLSQAQVLTKTIIAQDKLPPKIEELSRLPAPAAIHENVKKSILT 495
+ L Q Q L + Q+ L PKI+ +S+ P P + K+ L+
Sbjct: 64 IAALQQIQALMTFQMQQNNLFPKIDTISKSPTPELASPSAKRMRLS 109
>AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying
defective protein 8,isoform a protein.
Length = 1419
Score = 27.5 bits (58), Expect = 9.7
Identities = 19/67 (28%), Positives = 35/67 (52%)
Frame = +3
Query: 261 NYRTLRTTVTFRQESSKL*RETVSHAKPRQRPS*RFIASAGPN*NYNSSRQTSSKNRRTI 440
N+ +LR ++F++ S L + +H + Q S + A P+ + TSS + +I
Sbjct: 620 NFSSLRQKLSFKRRQSPLAGDQRAHPEVEQPVS--SSSPATPSISGPPPCATSSGSTSSI 677
Query: 441 TTTSSGC 461
T T++GC
Sbjct: 678 TITTTGC 684
>AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying
defective protein 8,isoform b protein.
Length = 1431
Score = 27.5 bits (58), Expect = 9.7
Identities = 19/67 (28%), Positives = 35/67 (52%)
Frame = +3
Query: 261 NYRTLRTTVTFRQESSKL*RETVSHAKPRQRPS*RFIASAGPN*NYNSSRQTSSKNRRTI 440
N+ +LR ++F++ S L + +H + Q S + A P+ + TSS + +I
Sbjct: 620 NFSSLRQKLSFKRRQSPLAGDQRAHPEVEQPVS--SSSPATPSISGPPPCATSSGSTSSI 677
Query: 441 TTTSSGC 461
T T++GC
Sbjct: 678 TITTTGC 684
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,513,111
Number of Sequences: 27780
Number of extensions: 338256
Number of successful extensions: 849
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 797
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 849
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1602927856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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