Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc29j19
(631 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 23 3.2
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 23 3.2
AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex det... 22 5.7
AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 22 5.7
AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 22 5.7
AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 22 5.7
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 22 5.7
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 22 5.7
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 22 5.7
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 22 5.7
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 22 5.7
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 22 5.7
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 22 5.7
AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex det... 22 5.7
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 22 5.7
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 22 5.7
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 22 5.7
AF023619-1|AAC39040.1| 355|Apis mellifera arginine kinase protein. 22 5.7
AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex det... 21 7.5
U70841-1|AAC47455.1| 377|Apis mellifera ultraviolet sensitive o... 21 9.9
AF080430-1|AAC28863.2| 208|Apis mellifera ribosomal protein S8 ... 21 9.9
AF004168-1|AAC13417.1| 377|Apis mellifera blue-sensitive opsin ... 21 9.9
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 21 9.9
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 22.6 bits (46), Expect = 3.2
Identities = 10/35 (28%), Positives = 18/35 (51%)
Frame = +1
Query: 478 PSSSRITIGGLALMHQATLPCDLGYINPIIKSPIP 582
PS++R +G +A + PC + P+ P+P
Sbjct: 450 PSATRYDLGAVATVGTTVAPC---FEEPLPSLPLP 481
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 22.6 bits (46), Expect = 3.2
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +3
Query: 507 SRPYASSHPPLRSRLHQPDH 566
S+ YA+S LRSR H H
Sbjct: 207 SKKYATSSNSLRSRTHDFQH 226
>AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 21.8 bits (44), Expect = 5.7
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +3
Query: 507 SRPYASSHPPLRSRLHQPDH 566
S+ YA+S LRSR H H
Sbjct: 196 SKKYATSSNSLRSRTHGFQH 215
>AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 21.8 bits (44), Expect = 5.7
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +3
Query: 507 SRPYASSHPPLRSRLHQPDH 566
S+ YA+S LRSR H H
Sbjct: 196 SKKYATSSNSLRSRTHGFQH 215
>AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 21.8 bits (44), Expect = 5.7
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +3
Query: 507 SRPYASSHPPLRSRLHQPDH 566
S+ YA+S LRSR H H
Sbjct: 207 SKKYATSSNSLRSRTHGFQH 226
>AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.8 bits (44), Expect = 5.7
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +3
Query: 507 SRPYASSHPPLRSRLHQPDH 566
S+ YA+S LRSR H H
Sbjct: 207 SKKYATSSNSLRSRTHGFQH 226
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.8 bits (44), Expect = 5.7
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +3
Query: 507 SRPYASSHPPLRSRLHQPDH 566
S+ YA+S LRSR H H
Sbjct: 207 SKKYATSSNSLRSRTHGFQH 226
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.8 bits (44), Expect = 5.7
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +3
Query: 507 SRPYASSHPPLRSRLHQPDH 566
S+ YA+S LRSR H H
Sbjct: 207 SKKYATSSNSLRSRTHGFQH 226
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.8 bits (44), Expect = 5.7
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +3
Query: 507 SRPYASSHPPLRSRLHQPDH 566
S+ YA+S LRSR H H
Sbjct: 207 SKKYATSSNSLRSRTHGFQH 226
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.8 bits (44), Expect = 5.7
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +3
Query: 507 SRPYASSHPPLRSRLHQPDH 566
S+ YA+S LRSR H H
Sbjct: 207 SKKYATSSNSLRSRTHGFQH 226
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 21.8 bits (44), Expect = 5.7
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +3
Query: 507 SRPYASSHPPLRSRLHQPDH 566
S+ YA+S LRSR H H
Sbjct: 196 SKKYATSSNSLRSRTHGFQH 215
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 21.8 bits (44), Expect = 5.7
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +3
Query: 507 SRPYASSHPPLRSRLHQPDH 566
S+ YA+S LRSR H H
Sbjct: 207 SKKYATSSNSLRSRTHGFQH 226
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 21.8 bits (44), Expect = 5.7
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +3
Query: 507 SRPYASSHPPLRSRLHQPDH 566
S+ YA+S LRSR H H
Sbjct: 207 SKKYATSSNSLRSRTHGFQH 226
>AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 21.8 bits (44), Expect = 5.7
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +3
Query: 507 SRPYASSHPPLRSRLHQPDH 566
S+ YA+S LRSR H H
Sbjct: 207 SKKYATSSNSLRSRTHGFQH 226
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.8 bits (44), Expect = 5.7
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +3
Query: 507 SRPYASSHPPLRSRLHQPDH 566
S+ YA+S LRSR H H
Sbjct: 207 SKKYATSSNSLRSRTHGFQH 226
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.8 bits (44), Expect = 5.7
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +3
Query: 507 SRPYASSHPPLRSRLHQPDH 566
S+ YA+S LRSR H H
Sbjct: 207 SKKYATSSNSLRSRTHGFQH 226
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 21.8 bits (44), Expect = 5.7
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +3
Query: 507 SRPYASSHPPLRSRLHQPDH 566
S+ YA+S LRSR H H
Sbjct: 207 SKKYATSSNSLRSRTHGFQH 226
>AF023619-1|AAC39040.1| 355|Apis mellifera arginine kinase protein.
Length = 355
Score = 21.8 bits (44), Expect = 5.7
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -1
Query: 628 RGLMEMDVKSGVVWCME 578
RG+ D K+ +VWC E
Sbjct: 207 RGIYHNDDKTFLVWCNE 223
>AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 21.4 bits (43), Expect = 7.5
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = +3
Query: 507 SRPYASSHPPLRSRLHQPDH 566
S+ YA+S LR+R H H
Sbjct: 207 SKKYATSSNSLRNRTHDFQH 226
>U70841-1|AAC47455.1| 377|Apis mellifera ultraviolet sensitive
opsin protein.
Length = 377
Score = 21.0 bits (42), Expect = 9.9
Identities = 8/22 (36%), Positives = 12/22 (54%)
Frame = +2
Query: 536 PAISATSTRSSNPRFHTPNHPR 601
PA+ A + +P + NHPR
Sbjct: 321 PAVFAKTVSCIDPWIYAINHPR 342
>AF080430-1|AAC28863.2| 208|Apis mellifera ribosomal protein S8
protein.
Length = 208
Score = 21.0 bits (42), Expect = 9.9
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = -3
Query: 536 GRVA*CIRARPPIVMRED 483
GRV CI +RP RED
Sbjct: 169 GRVLACISSRPGQCGRED 186
>AF004168-1|AAC13417.1| 377|Apis mellifera blue-sensitive opsin
protein.
Length = 377
Score = 21.0 bits (42), Expect = 9.9
Identities = 8/22 (36%), Positives = 12/22 (54%)
Frame = +2
Query: 536 PAISATSTRSSNPRFHTPNHPR 601
PA+ A + +P + NHPR
Sbjct: 321 PAVFAKTVSCIDPWIYAINHPR 342
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 21.0 bits (42), Expect = 9.9
Identities = 9/31 (29%), Positives = 13/31 (41%)
Frame = +1
Query: 535 PCDLGYINPIIKSPIPYTKPPQT*HPFPSIP 627
P + + ++SP PP P P IP
Sbjct: 391 PVSMSALVSAVRSPAGGQLPPSAGAPMPPIP 421
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,824
Number of Sequences: 438
Number of extensions: 3306
Number of successful extensions: 37
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18826962
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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