Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc29j12
(641 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L28957-1|AAA72127.1| 367|Homo sapiens CTP:phosphocholine cytidy... 93 8e-19
BC046355-1|AAH46355.1| 367|Homo sapiens phosphate cytidylyltran... 93 8e-19
AF148464-1|AAD35088.1| 369|Homo sapiens CTP:phosphocholine cyti... 91 4e-18
AF052510-1|AAC39754.1| 330|Homo sapiens CTP:phosphocholine cyti... 91 4e-18
BC045634-1|AAH45634.2| 351|Homo sapiens PCYT1B protein protein. 89 9e-18
D84307-1|BAA12311.1| 389|Homo sapiens phosphoethanolamine cytid... 49 2e-05
CR456779-1|CAG33060.1| 389|Homo sapiens PCYT2 protein. 49 2e-05
BC010075-1|AAH10075.1| 389|Homo sapiens phosphate cytidylyltran... 49 2e-05
BC000351-1|AAH00351.1| 389|Homo sapiens phosphate cytidylyltran... 49 2e-05
BC126261-1|AAI26262.1| 593|Homo sapiens FLJ20273 protein protein. 30 8.0
AK000280-1|BAA91049.1| 524|Homo sapiens protein ( Homo sapiens ... 30 8.0
AF262323-1|AAM21973.1| 593|Homo sapiens RNA-binding protein pro... 30 8.0
>L28957-1|AAA72127.1| 367|Homo sapiens CTP:phosphocholine
cytidylyltransferase protein.
Length = 367
Score = 93.1 bits (221), Expect = 8e-19
Identities = 52/93 (55%), Positives = 61/93 (65%), Gaps = 2/93 (2%)
Frame = +1
Query: 367 SVSLRHAAPFSTDPMALAERD-SCHYGRIPRAAALAGT-AGRKVRVYSDGIYDMFHQGHA 540
+V LR APFS + E D S Y R+ A GT R VRVY+DGI+D+FH GHA
Sbjct: 38 AVGLRQPAPFSDE----IEVDFSKPYVRVTMEEASRGTPCERPVRVYADGIFDLFHSGHA 93
Query: 541 RQLQQAKTVFPNVYLIVXVCSDQLTHSRKGRTV 639
R L QAK +FPN YLIV VCSD+LTH+ KG TV
Sbjct: 94 RALMQAKNLFPNTYLIVGVCSDELTHNFKGFTV 126
>BC046355-1|AAH46355.1| 367|Homo sapiens phosphate
cytidylyltransferase 1, choline, alpha protein.
Length = 367
Score = 93.1 bits (221), Expect = 8e-19
Identities = 52/93 (55%), Positives = 61/93 (65%), Gaps = 2/93 (2%)
Frame = +1
Query: 367 SVSLRHAAPFSTDPMALAERD-SCHYGRIPRAAALAGT-AGRKVRVYSDGIYDMFHQGHA 540
+V LR APFS + E D S Y R+ A GT R VRVY+DGI+D+FH GHA
Sbjct: 38 AVGLRQPAPFSDE----IEVDFSKPYVRVTMEEASRGTPCERPVRVYADGIFDLFHSGHA 93
Query: 541 RQLQQAKTVFPNVYLIVXVCSDQLTHSRKGRTV 639
R L QAK +FPN YLIV VCSD+LTH+ KG TV
Sbjct: 94 RALMQAKNLFPNTYLIVGVCSDELTHNFKGFTV 126
>AF148464-1|AAD35088.1| 369|Homo sapiens CTP:phosphocholine
cytidylyltransferase CCTB2 isoform protein.
Length = 369
Score = 90.6 bits (215), Expect = 4e-18
Identities = 48/100 (48%), Positives = 63/100 (63%), Gaps = 2/100 (2%)
Frame = +1
Query: 346 VNHECTES-VSLRHAAPFSTDPMALAERDSCHYGRIPRAAALAGT-AGRKVRVYSDGIYD 519
+ H C + ++L APF+ + + + ++ A A GT A R VRVY+DGI+D
Sbjct: 30 IEHTCPQPRLTLTAPAPFADETNCQCQAP---HEKLTIAQARLGTPADRPVRVYADGIFD 86
Query: 520 MFHQGHARQLQQAKTVFPNVYLIVXVCSDQLTHSRKGRTV 639
+FH GHAR L QAKT+FPN YL+V VCSD LTH KG TV
Sbjct: 87 LFHSGHARALMQAKTLFPNSYLLVGVCSDDLTHKFKGFTV 126
>AF052510-1|AAC39754.1| 330|Homo sapiens CTP:phosphocholine
cytidylyltransferase b protein.
Length = 330
Score = 90.6 bits (215), Expect = 4e-18
Identities = 48/100 (48%), Positives = 63/100 (63%), Gaps = 2/100 (2%)
Frame = +1
Query: 346 VNHECTES-VSLRHAAPFSTDPMALAERDSCHYGRIPRAAALAGT-AGRKVRVYSDGIYD 519
+ H C + ++L APF+ + + + ++ A A GT A R VRVY+DGI+D
Sbjct: 30 IEHTCPQPRLTLTAPAPFADETNCQCQAP---HEKLTIAQARLGTPADRPVRVYADGIFD 86
Query: 520 MFHQGHARQLQQAKTVFPNVYLIVXVCSDQLTHSRKGRTV 639
+FH GHAR L QAKT+FPN YL+V VCSD LTH KG TV
Sbjct: 87 LFHSGHARALMQAKTLFPNSYLLVGVCSDDLTHKFKGFTV 126
>BC045634-1|AAH45634.2| 351|Homo sapiens PCYT1B protein protein.
Length = 351
Score = 89.4 bits (212), Expect = 9e-18
Identities = 46/85 (54%), Positives = 56/85 (65%), Gaps = 5/85 (5%)
Frame = +1
Query: 400 TDPMALAERDSCH----YGRIPRAAALAGT-AGRKVRVYSDGIYDMFHQGHARQLQQAKT 564
T P A+ +C + ++ A A GT A R VRVY+DGI+D+FH GHAR L QAKT
Sbjct: 24 TAPAPFADETNCQCQAPHEKLTIAQARLGTPADRPVRVYADGIFDLFHSGHARALMQAKT 83
Query: 565 VFPNVYLIVXVCSDQLTHSRKGRTV 639
+FPN YL+V VCSD LTH KG TV
Sbjct: 84 LFPNSYLLVGVCSDDLTHKFKGFTV 108
>D84307-1|BAA12311.1| 389|Homo sapiens phosphoethanolamine
cytidylyltransferase protein.
Length = 389
Score = 48.8 bits (111), Expect = 2e-05
Identities = 27/57 (47%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Frame = +1
Query: 472 GTAGRK-VRVYSDGIYDMFHQGHARQLQQAKTVFPNVYLIVXVCSDQLTHSRKGRTV 639
G GR+ VRV+ DG YDM H GH+ QL+QA+ + YLIV V +D+ KG V
Sbjct: 16 GPGGRRAVRVWCDGCYDMVHYGHSNQLRQARAM--GDYLIVGVHTDEEIAKHKGPPV 70
Score = 32.3 bits (70), Expect = 1.5
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = +1
Query: 496 VYSDGIYDMFHQGHARQLQQAKTVFPNVYLIVXVCSDQLTHSRKGR 633
+Y G +D+FH GH L++ + Y+I + DQ + KG+
Sbjct: 216 IYVAGAFDLFHIGHVDFLEKVHRLAERPYIIAGLHFDQEVNHYKGK 261
>CR456779-1|CAG33060.1| 389|Homo sapiens PCYT2 protein.
Length = 389
Score = 48.8 bits (111), Expect = 2e-05
Identities = 27/57 (47%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Frame = +1
Query: 472 GTAGRK-VRVYSDGIYDMFHQGHARQLQQAKTVFPNVYLIVXVCSDQLTHSRKGRTV 639
G GR+ VRV+ DG YDM H GH+ QL+QA+ + YLIV V +D+ KG V
Sbjct: 16 GPGGRRAVRVWCDGCYDMVHYGHSNQLRQARAM--GDYLIVGVHTDEEIAKHKGPPV 70
Score = 32.3 bits (70), Expect = 1.5
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = +1
Query: 496 VYSDGIYDMFHQGHARQLQQAKTVFPNVYLIVXVCSDQLTHSRKGR 633
+Y G +D+FH GH L++ + Y+I + DQ + KG+
Sbjct: 216 IYVAGAFDLFHIGHVDFLEKVHRLAERPYIIAGLHFDQEVNHYKGK 261
>BC010075-1|AAH10075.1| 389|Homo sapiens phosphate
cytidylyltransferase 2, ethanolamine protein.
Length = 389
Score = 48.8 bits (111), Expect = 2e-05
Identities = 27/57 (47%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Frame = +1
Query: 472 GTAGRK-VRVYSDGIYDMFHQGHARQLQQAKTVFPNVYLIVXVCSDQLTHSRKGRTV 639
G GR+ VRV+ DG YDM H GH+ QL+QA+ + YLIV V +D+ KG V
Sbjct: 16 GPGGRRAVRVWCDGCYDMVHYGHSNQLRQARAM--GDYLIVGVHTDEEIAKHKGPPV 70
Score = 30.3 bits (65), Expect = 6.1
Identities = 13/46 (28%), Positives = 24/46 (52%)
Frame = +1
Query: 496 VYSDGIYDMFHQGHARQLQQAKTVFPNVYLIVXVCSDQLTHSRKGR 633
+Y G +D+FH GH L++ + ++I + DQ + KG+
Sbjct: 216 IYVAGAFDLFHIGHVDFLEKVHRLAERPHIIAGLHFDQEVNHYKGK 261
>BC000351-1|AAH00351.1| 389|Homo sapiens phosphate
cytidylyltransferase 2, ethanolamine protein.
Length = 389
Score = 48.8 bits (111), Expect = 2e-05
Identities = 27/57 (47%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Frame = +1
Query: 472 GTAGRK-VRVYSDGIYDMFHQGHARQLQQAKTVFPNVYLIVXVCSDQLTHSRKGRTV 639
G GR+ VRV+ DG YDM H GH+ QL+QA+ + YLIV V +D+ KG V
Sbjct: 16 GPGGRRAVRVWCDGCYDMVHYGHSNQLRQARAM--GDYLIVGVHTDEEIAKHKGPPV 70
Score = 32.3 bits (70), Expect = 1.5
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = +1
Query: 496 VYSDGIYDMFHQGHARQLQQAKTVFPNVYLIVXVCSDQLTHSRKGR 633
+Y G +D+FH GH L++ + Y+I + DQ + KG+
Sbjct: 216 IYVAGAFDLFHIGHVDFLEKVHRLAERPYIIAGLHFDQEVNHYKGK 261
>BC126261-1|AAI26262.1| 593|Homo sapiens FLJ20273 protein protein.
Length = 593
Score = 29.9 bits (64), Expect = 8.0
Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 5/54 (9%)
Frame = -3
Query: 558 RLLQLPRVPLVEHVVDPVRVDPD-----LAARGAGQCRGAWYPPVVTRIPFSQR 412
++++ ++ VEH++ P+ V PD AA A A P V T PF R
Sbjct: 463 KMIEDGKIHTVEHMISPIAVQPDPASAAAAAAAAAAAAAAVIPTVSTPPPFQGR 516
>AK000280-1|BAA91049.1| 524|Homo sapiens protein ( Homo sapiens
cDNA FLJ20273 fis, clone HEP01750. ).
Length = 524
Score = 29.9 bits (64), Expect = 8.0
Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 5/54 (9%)
Frame = -3
Query: 558 RLLQLPRVPLVEHVVDPVRVDPD-----LAARGAGQCRGAWYPPVVTRIPFSQR 412
++++ ++ VEH++ P+ V PD AA A A P V T PF R
Sbjct: 394 KMIEDGKIHTVEHMISPIAVQPDPASAAAAAAAAAAAAAAVIPTVSTPPPFQGR 447
>AF262323-1|AAM21973.1| 593|Homo sapiens RNA-binding protein
protein.
Length = 593
Score = 29.9 bits (64), Expect = 8.0
Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 5/54 (9%)
Frame = -3
Query: 558 RLLQLPRVPLVEHVVDPVRVDPD-----LAARGAGQCRGAWYPPVVTRIPFSQR 412
++++ ++ VEH++ P+ V PD AA A A P V T PF R
Sbjct: 463 KMIEDGKIHTVEHMISPIAVQPDPASAAAAAAAAAAAAAAVIPTVSTPPPFQGR 516
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,149,318
Number of Sequences: 237096
Number of extensions: 1512924
Number of successful extensions: 2939
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 2848
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2939
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7085195460
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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