Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc29j03
(662 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1183.08c |rpl101|rpl1-1, rpl10a-1|60S ribosomal protein L10a... 31 0.11
SPBC30D10.18c |rpl102|rpl1-2, rpl10a-2|60S ribosomal protein L10... 30 0.26
SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein Mam... 30 0.34
SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces pombe... 30 0.34
SPAC1002.03c |gls2||glucosidase II Gls2|Schizosaccharomyces pomb... 29 0.45
SPAC167.01 |ppk4||serine/threonine protein kinase Ppk4 |Schizosa... 29 0.79
SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain |Schizosaccha... 29 0.79
SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1 |Schi... 28 1.4
SPCC1620.14c |snf22|SPCC830.01c|ATP-dependent DNA helicase Snf22... 27 2.4
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 27 2.4
SPCC830.05c |epl1||histone acetyltransferase complex subunit Epl... 27 3.2
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 27 3.2
SPCC1322.10 |||conserved fungal protein|Schizosaccharomyces pomb... 27 3.2
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 27 3.2
SPBP23A10.11c |||conserved fungal protein|Schizosaccharomyces po... 26 4.2
SPAC27D7.11c |||But2 family protein|Schizosaccharomyces pombe|ch... 26 4.2
SPAC5H10.03 |||phosphoglycerate mutase family|Schizosaccharomyce... 26 5.6
SPBC428.10 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 25 7.4
SPCC548.05c |||ubiquitin-protein ligase E3 |Schizosaccharomyces ... 25 7.4
SPAC17H9.10c |ddb1||damaged DNA binding protein Ddb1 |Schizosacc... 25 7.4
SPAC2F7.07c |||histone deacetylase complex subunit Rco1 |Schizos... 25 9.7
SPAC10F6.01c ||SPAC4C5.05c|sulfite reductase beta subunit |Schiz... 25 9.7
>SPCC1183.08c |rpl101|rpl1-1, rpl10a-1|60S ribosomal protein
L10a|Schizosaccharomyces pombe|chr 3|||Manual
Length = 216
Score = 31.5 bits (68), Expect = 0.11
Identities = 16/29 (55%), Positives = 18/29 (62%)
Frame = -2
Query: 532 IRLPSVPHPTPAASCILGIEDPLHRAPHG 446
I+LP+VP P A CILG L RA HG
Sbjct: 52 IKLPNVPRPNMAI-CILGDAHDLDRAKHG 79
>SPBC30D10.18c |rpl102|rpl1-2, rpl10a-2|60S ribosomal protein
L10a|Schizosaccharomyces pombe|chr 2|||Manual
Length = 216
Score = 30.3 bits (65), Expect = 0.26
Identities = 15/29 (51%), Positives = 18/29 (62%)
Frame = -2
Query: 532 IRLPSVPHPTPAASCILGIEDPLHRAPHG 446
I+LP+VP P + CILG L RA HG
Sbjct: 52 IKLPNVPRPNMSI-CILGDAHDLDRAKHG 79
>SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein
Mam3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1082
Score = 29.9 bits (64), Expect = 0.34
Identities = 26/74 (35%), Positives = 34/74 (45%)
Frame = -1
Query: 632 SKNSSFKGSDVMMTLCPCVLTRITFPSSFEISFNPSAFGSPSNASCVLYLGYRGSASSSS 453
S +SS S + + T PSS + F+PSA S AS V Y+ S SSSS
Sbjct: 138 STSSSVINSPTGTAVSSQISTLSMSPSSTPV-FSPSASVSSKVASSVSYVSSEPSDSSSS 196
Query: 452 TRNVPSASADNLKA 411
T V ++ N A
Sbjct: 197 TNTVILTTSVNSPA 210
>SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 317
Score = 29.9 bits (64), Expect = 0.34
Identities = 28/104 (26%), Positives = 51/104 (49%), Gaps = 7/104 (6%)
Frame = -1
Query: 662 LRTTATSPXWSKNSSFKGSDVMMTLCPCVL-TR------ITFPSSFEISFNPSAFGSPSN 504
L+ +T + + S+ G+ ++ P ++ TR IT SS S + S+ SPS+
Sbjct: 108 LQACSTCTISTSSLSYSGTISSTSIAPSMIGTRTSSSYFITSSSSTPSSSSSSSSSSPSS 167
Query: 503 ASCVLYLGYRGSASSSSTRNVPSASADNLKAYFHKTVRFSSAAS 372
+S + S+SSSS+ S+S+ + K+ + S+AS
Sbjct: 168 SSSKSSSSSKSSSSSSSSSKSSSSSSSSSKSSSSSSSSSKSSAS 211
>SPAC1002.03c |gls2||glucosidase II Gls2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 923
Score = 29.5 bits (63), Expect = 0.45
Identities = 26/98 (26%), Positives = 42/98 (42%), Gaps = 6/98 (6%)
Frame = +1
Query: 202 FVIIG-ISAVDKNKFKTCSQSGFCKR---LRPFKPEKSQYS--LNLDSILVHGNVLSAEV 363
F I G +++FKT Q GF +R L F+ E ++ L+SI + V+S
Sbjct: 17 FAIFGSCQGAFRHQFKTAEQDGFARRNRDLAKFQKENLNWNGLFQLNSISYNSGVVSG-- 74
Query: 364 VTIDAADEKRTVLWKYAFKLSALADGTFRVELDEADPL 477
+ E + F +S L + R ++DE L
Sbjct: 75 -VFEQQSENGENQHLFPFSISFLKNDVVRFQMDEKSRL 111
>SPAC167.01 |ppk4||serine/threonine protein kinase Ppk4
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1072
Score = 28.7 bits (61), Expect = 0.79
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +1
Query: 397 VLWKYAFKLSALADGTFRVELDEADPLYP 483
+ W YA KL L D + R E++E DP P
Sbjct: 937 LFWDYAKKLDFLIDVSDRFEVEERDPPSP 965
>SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 4196
Score = 28.7 bits (61), Expect = 0.79
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Frame = -1
Query: 602 VMMTLCPCVLTRITFPSSFEISFNPSAFGSPSNAS-C-VLYLGYRGSASS 459
+ +T+ P L R PS+ + F P GSP N C +L+L + SS
Sbjct: 1984 IFVTMNPGYLGRFKLPSNLKKLFRPIWMGSPDNKKICEILFLSFGFKESS 2033
>SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 374
Score = 27.9 bits (59), Expect = 1.4
Identities = 20/75 (26%), Positives = 38/75 (50%)
Frame = -1
Query: 578 VLTRITFPSSFEISFNPSAFGSPSNASCVLYLGYRGSASSSSTRNVPSASADNLKAYFHK 399
VL SS + + S+ SPS++S S+SSSS+ + S+S+ + +
Sbjct: 122 VLQTTVSSSSVSSTTSSSSSSSPSSSSTTTTTSPSSSSSSSSSSSSSSSSSSSSSSSSSS 181
Query: 398 TVRFSSAASMVTTSA 354
+ SS++S ++S+
Sbjct: 182 SSSSSSSSSSSSSSS 196
Score = 27.9 bits (59), Expect = 1.4
Identities = 28/103 (27%), Positives = 47/103 (45%)
Frame = -1
Query: 662 LRTTATSPXWSKNSSFKGSDVMMTLCPCVLTRITFPSSFEISFNPSAFGSPSNASCVLYL 483
L+TT +S S +S S + T T PSS S + S+ S S++S
Sbjct: 123 LQTTVSSSSVSSTTSSSSSSSPSSSST---TTTTSPSSSSSSSSSSSSSSSSSSSSSSSS 179
Query: 482 GYRGSASSSSTRNVPSASADNLKAYFHKTVRFSSAASMVTTSA 354
S+SSSS+ + S+S+ + + SS +S ++S+
Sbjct: 180 SSSSSSSSSSSSSSSSSSSSSSSSSSSSVPITSSTSSSHSSSS 222
>SPCC1620.14c |snf22|SPCC830.01c|ATP-dependent DNA helicase
Snf22|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1680
Score = 27.1 bits (57), Expect = 2.4
Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 4/61 (6%)
Frame = -1
Query: 542 ISFNPSAFG--SPSNASCVL--YLGYRGSASSSSTRNVPSASADNLKAYFHKTVRFSSAA 375
I NPS F SP + S + Y GY+ A+S + +PS++ N TV +A
Sbjct: 278 IPVNPSTFSASSPPSGSMLASPYNGYQNDAASFAHSKLPSSANPNTPFNSTATVDVGAAG 337
Query: 374 S 372
S
Sbjct: 338 S 338
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 27.1 bits (57), Expect = 2.4
Identities = 24/101 (23%), Positives = 49/101 (48%)
Frame = -1
Query: 656 TTATSPXWSKNSSFKGSDVMMTLCPCVLTRITFPSSFEISFNPSAFGSPSNASCVLYLGY 477
+T++ P S +SS S + + + + SS IS + S+ SP++ S +
Sbjct: 236 STSSIPSTSSSSSSTSSSLSSSSSSSTASSSSSSSSI-ISSSSSSSSSPTSTSSTI---- 290
Query: 476 RGSASSSSTRNVPSASADNLKAYFHKTVRFSSAASMVTTSA 354
+SSSS+ + P++++ + + + FSS S + S+
Sbjct: 291 ---SSSSSSSSSPTSTSSTISSSSSSSSSFSSTLSSSSMSS 328
Score = 26.2 bits (55), Expect = 4.2
Identities = 28/105 (26%), Positives = 49/105 (46%), Gaps = 4/105 (3%)
Frame = -1
Query: 656 TTATSPXWSKNSSFKGSDVM----MTLCPCVLTRITFPSSFEISFNPSAFGSPSNASCVL 489
+T +S S +SSF S ++ + +F S+ S + S+F S ++S
Sbjct: 319 STLSSSSMSSSSSFSSSPTSSSSTISSSSSSPSSSSFSSTTSSSKSSSSFSSTVSSSSST 378
Query: 488 YLGYRGSASSSSTRNVPSASADNLKAYFHKTVRFSSAASMVTTSA 354
S+SSSS+R S+S+ + HK+ S ++S +SA
Sbjct: 379 SSSTLTSSSSSSSRPA-SSSSHSSSLSSHKSSSSSKSSSAPVSSA 422
>SPCC830.05c |epl1||histone acetyltransferase complex subunit Epl1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 557
Score = 26.6 bits (56), Expect = 3.2
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = -2
Query: 352 IERCREPKYCPNSNYTEIFL 293
+E C P+YC + + TE FL
Sbjct: 113 VEECTNPEYCMDEHDTEYFL 132
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 26.6 bits (56), Expect = 3.2
Identities = 28/105 (26%), Positives = 47/105 (44%), Gaps = 2/105 (1%)
Frame = -1
Query: 662 LRTTATSPXWSKNSSFKGSDVMMTLCPCVLTRITFPSSF-EISFNPSAFGSPSNASCVLY 486
L+ TS ++ +S+ S +T + +T SS S N + SP+++S
Sbjct: 56 LKRATTSYNYNTSSASSSS---LTSSSAASSSLTSSSSLASSSTNSTTSASPTSSSLTSS 112
Query: 485 LGYRGSASSSSTRNVPSASAD-NLKAYFHKTVRFSSAASMVTTSA 354
S +SSST + AS+ + ++ SS AS TTS+
Sbjct: 113 SATSSSLASSSTTSSSLASSSITSSSLASSSITSSSLASSSTTSS 157
>SPCC1322.10 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 262
Score = 26.6 bits (56), Expect = 3.2
Identities = 26/93 (27%), Positives = 46/93 (49%)
Frame = -1
Query: 632 SKNSSFKGSDVMMTLCPCVLTRITFPSSFEISFNPSAFGSPSNASCVLYLGYRGSASSSS 453
S+ F+GSD TL ++ + SS S S+ +PS++S S+SSSS
Sbjct: 112 SEQFDFEGSD--STLAASTISGGIY-SSTSASSTSSSTATPSSSSTT-----SSSSSSSS 163
Query: 452 TRNVPSASADNLKAYFHKTVRFSSAASMVTTSA 354
+ + S+ ++ + +V SSA+S + S+
Sbjct: 164 STPISSSITSSISSSASSSVSSSSASSSGSISS 196
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 26.6 bits (56), Expect = 3.2
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = -1
Query: 464 SSSSTRNVPSASADNLKAYFHKTVRFSSAASMVTTS 357
SSSS+R + ++S + FH S+ +S TTS
Sbjct: 797 SSSSSRTISTSSTNEYNTSFHAPTVSSTTSSSSTTS 832
>SPBP23A10.11c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 507
Score = 26.2 bits (55), Expect = 4.2
Identities = 18/40 (45%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = -1
Query: 458 SSTRNVPSASADNLKAYFHKTVRFSSAASMV-TTSADRTL 342
SS ++ SAS DNL A T +S AS V T SA T+
Sbjct: 167 SSLASLSSASTDNLAASVTPTTVAASVASSVDTDSASATI 206
>SPAC27D7.11c |||But2 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 463
Score = 26.2 bits (55), Expect = 4.2
Identities = 27/117 (23%), Positives = 44/117 (37%)
Frame = -1
Query: 518 GSPSNASCVLYLGYRGSASSSSTRNVPSASADNLKAYFHKTVRFSSAASMVTTSADRTLP 339
G+PS + SSSST N ++S N + T+ + A+++ +T A
Sbjct: 153 GNPSCVGIAVLAVLPQPISSSSTYNSTTSSYHNSTSTPPPTITSTKASTVTSTEATTVTT 212
Query: 338 *TKILSKFKLY*DFSGLKGRSLLQKPD*LHVLNLFLSTAEMPIITNAATRTKAQTFI 168
T + + G S + V + ST N AT TK T++
Sbjct: 213 TTAVTVTATETYTVTATNGGSTITSTGASTVTSTQPSTVTSTQRKNTATTTKTTTYV 269
>SPAC5H10.03 |||phosphoglycerate mutase family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 219
Score = 25.8 bits (54), Expect = 5.6
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +1
Query: 451 VELDEADPLYPRYRTQLALDG 513
+ELD+ + LYP+Y Q DG
Sbjct: 107 LELDKLNKLYPKYNFQSCQDG 127
>SPBC428.10 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 751
Score = 25.4 bits (53), Expect = 7.4
Identities = 21/83 (25%), Positives = 33/83 (39%)
Frame = -1
Query: 632 SKNSSFKGSDVMMTLCPCVLTRITFPSSFEISFNPSAFGSPSNASCVLYLGYRGSASSSS 453
SK S + S +L C + R + N S F S + + S SS
Sbjct: 597 SKASYNQDSSPNASLEQCFVQRSPSKMLTTLRNNSSTFPSLRKNAMIARKSTADSLSSPK 656
Query: 452 TRNVPSASADNLKAYFHKTVRFS 384
++VPS +L HK++ +S
Sbjct: 657 RQSVPSTPKASLSPRVHKSMTYS 679
>SPCC548.05c |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 468
Score = 25.4 bits (53), Expect = 7.4
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +2
Query: 482 QDTGRSWRWMGNRRQTD 532
QD+GR W W G ++D
Sbjct: 218 QDSGREWFWDGENAESD 234
>SPAC17H9.10c |ddb1||damaged DNA binding protein Ddb1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1072
Score = 25.4 bits (53), Expect = 7.4
Identities = 10/41 (24%), Positives = 20/41 (48%)
Frame = -2
Query: 184 RPRPSSWVFIAILCRHKPITKCPSGIFNNTSQLDTL*GIIF 62
R +++F++++C + I P G+F+ L IF
Sbjct: 415 RANYDNYIFLSLICETRAIIVSPEGVFSANHDLSCEESTIF 455
>SPAC2F7.07c |||histone deacetylase complex subunit Rco1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 607
Score = 25.0 bits (52), Expect = 9.7
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = +1
Query: 544 SKDDGKVILVNTQGHKVIITSEPLKLEFLD 633
++D+ V + QG ++ S+P KL FL+
Sbjct: 492 NEDEPSVQTIQLQGKIRVVPSKPFKLNFLE 521
>SPAC10F6.01c ||SPAC4C5.05c|sulfite reductase beta subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1473
Score = 25.0 bits (52), Expect = 9.7
Identities = 14/47 (29%), Positives = 21/47 (44%)
Frame = +1
Query: 220 SAVDKNKFKTCSQSGFCKRLRPFKPEKSQYSLNLDSILVHGNVLSAE 360
S D KF+T + SG + P K ++ D+IL V S +
Sbjct: 42 SLKDLKKFETLNVSGKVPHVLPLKSHADPFAHIADAILAEEEVASTQ 88
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,913,696
Number of Sequences: 5004
Number of extensions: 64341
Number of successful extensions: 187
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 163
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 181
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 301829700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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