Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc29j03
(662 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D42041-1|BAA07642.1| 943|Homo sapiens KIAA0088 protein. 86 1e-16
AJ000332-1|CAA04006.1| 944|Homo sapiens Glucosidase II protein. 86 1e-16
AF144074-1|AAF66685.1| 966|Homo sapiens glucosidase II alpha su... 86 1e-16
BC112051-1|AAI12052.1| 914|Homo sapiens glucosidase, alpha; neu... 56 1e-07
AF545046-1|AAN74757.1| 914|Homo sapiens neutral alpha-glucosida... 56 1e-07
AF545045-1|AAN74756.1| 914|Homo sapiens neutral alpha glucosida... 56 1e-07
BC093833-1|AAH93833.1| 914|Homo sapiens glucosidase, alpha; neu... 56 1e-07
BC059406-1|AAH59406.1| 914|Homo sapiens glucosidase, alpha; neu... 56 1e-07
AK074037-1|BAB84863.1| 925|Homo sapiens FLJ00088 protein protein. 56 1e-07
BC065266-1|AAH65266.1| 847|Homo sapiens GANAB protein protein. 44 4e-04
AB210034-1|BAE06116.1| 1537|Homo sapiens C6orf21 variant protein... 33 0.69
AK092426-1|BAC03887.1| 258|Homo sapiens protein ( Homo sapiens ... 33 1.2
BC117319-1|AAI17320.1| 257|Homo sapiens TPRXL protein protein. 31 4.9
>D42041-1|BAA07642.1| 943|Homo sapiens KIAA0088 protein.
Length = 943
Score = 85.8 bits (203), Expect = 1e-16
Identities = 55/159 (34%), Positives = 82/159 (51%), Gaps = 3/159 (1%)
Frame = +1
Query: 166 KMKVWA-LVLVAAFVIIGIS-AVDKNKFKTCSQSGFCKRLRPFKPEKSQYSLNLDSILVH 339
+ + WA LVL V +GI+ AVD++ FKTC +S FCKR R +P S Y LDS+
Sbjct: 10 RRRSWASLVLAFLGVCLGITLAVDRSNFKTCEESSFCKRQRSIRPGLSPYRALLDSL--- 66
Query: 340 GNVLSAEVVTIDAADEKRTVLWKYAFKLSALADGTFRVELDEADPLYPRYRTQLALDGEP 519
L + +T+ E VL +L L R +DE +P PRYR L +P
Sbjct: 67 --QLGPDSLTVHLIHEVTKVL--LVLELQGLQKNMTRFRIDELEPRRPRYRVPDVLVADP 122
Query: 520 KADGLKLISKDDGKVILVNTQG-HKVIITSEPLKLEFLD 633
L + +D+ V L +G +K+I+T+ P +L+ L+
Sbjct: 123 PIARLSVSGRDENSVELTMAEGPYKIILTARPFRLDLLE 161
>AJ000332-1|CAA04006.1| 944|Homo sapiens Glucosidase II protein.
Length = 944
Score = 85.8 bits (203), Expect = 1e-16
Identities = 55/159 (34%), Positives = 82/159 (51%), Gaps = 3/159 (1%)
Frame = +1
Query: 166 KMKVWA-LVLVAAFVIIGIS-AVDKNKFKTCSQSGFCKRLRPFKPEKSQYSLNLDSILVH 339
+ + WA LVL V +GI+ AVD++ FKTC +S FCKR R +P S Y LDS+
Sbjct: 11 RRRSWASLVLAFLGVCLGITLAVDRSNFKTCEESSFCKRQRSIRPGLSPYRALLDSL--- 67
Query: 340 GNVLSAEVVTIDAADEKRTVLWKYAFKLSALADGTFRVELDEADPLYPRYRTQLALDGEP 519
L + +T+ E VL +L L R +DE +P PRYR L +P
Sbjct: 68 --QLGPDSLTVHLIHEVTKVL--LVLELQGLQKNMTRFRIDELEPRRPRYRVPDVLVADP 123
Query: 520 KADGLKLISKDDGKVILVNTQG-HKVIITSEPLKLEFLD 633
L + +D+ V L +G +K+I+T+ P +L+ L+
Sbjct: 124 PIARLSVSGRDENSVELTMAEGPYKIILTARPFRLDLLE 162
>AF144074-1|AAF66685.1| 966|Homo sapiens glucosidase II alpha
subunit protein.
Length = 966
Score = 85.8 bits (203), Expect = 1e-16
Identities = 55/159 (34%), Positives = 82/159 (51%), Gaps = 3/159 (1%)
Frame = +1
Query: 166 KMKVWA-LVLVAAFVIIGIS-AVDKNKFKTCSQSGFCKRLRPFKPEKSQYSLNLDSILVH 339
+ + WA LVL V +GI+ AVD++ FKTC +S FCKR R +P S Y LDS+
Sbjct: 11 RRRSWASLVLAFLGVCLGITLAVDRSNFKTCEESSFCKRQRSIRPGLSPYRALLDSL--- 67
Query: 340 GNVLSAEVVTIDAADEKRTVLWKYAFKLSALADGTFRVELDEADPLYPRYRTQLALDGEP 519
L + +T+ E VL +L L R +DE +P PRYR L +P
Sbjct: 68 --QLGPDSLTVHLIHEVTKVL--LVLELQGLQKNMTRFRIDELEPRRPRYRVPDVLVADP 123
Query: 520 KADGLKLISKDDGKVILVNTQG-HKVIITSEPLKLEFLD 633
L + +D+ V L +G +K+I+T+ P +L+ L+
Sbjct: 124 PIARLSVSGRDENSVELTMAEGPYKIILTARPFRLDLLE 162
>BC112051-1|AAI12052.1| 914|Homo sapiens glucosidase, alpha;
neutral C protein.
Length = 914
Score = 56.0 bits (129), Expect = 1e-07
Identities = 38/137 (27%), Positives = 67/137 (48%), Gaps = 1/137 (0%)
Frame = +1
Query: 223 AVDKNKFKTCSQSGFCKRLRPFKPEKSQYSLNLDSILVHGNVLSAEVVTIDAADEKRTVL 402
AVDKN F+ C++ F +R + + +KS Y LDS+ + +++ +E V
Sbjct: 15 AVDKNIFRDCNKIAFYRRQKQWLSKKSTYQALLDSVTTDEDSTRFQII-----NEASKV- 68
Query: 403 WKYAFKLSALADGTFRVELDEADPLYPRYRTQLALDGEPKADGLKLISKDDGKVILVNTQ 582
++ + FR++++E PL PR+ L +P L S D G +IL + +
Sbjct: 69 -PLLAEIYGIEGNIFRLKINEETPLKPRFEVPDVLTSKPSTVRLISCSGDTGSLILADGK 127
Query: 583 GH-KVIITSEPLKLEFL 630
G K IT+ P K++ +
Sbjct: 128 GDLKCHITANPFKVDLV 144
>AF545046-1|AAN74757.1| 914|Homo sapiens neutral alpha-glucosidase
C type 3 protein.
Length = 914
Score = 56.0 bits (129), Expect = 1e-07
Identities = 38/137 (27%), Positives = 67/137 (48%), Gaps = 1/137 (0%)
Frame = +1
Query: 223 AVDKNKFKTCSQSGFCKRLRPFKPEKSQYSLNLDSILVHGNVLSAEVVTIDAADEKRTVL 402
AVDKN F+ C++ F +R + + +KS Y LDS+ + +++ +E V
Sbjct: 15 AVDKNIFRDCNKIAFYRRQKQWLSKKSTYQALLDSVTTDEDSTRFQII-----NEASKV- 68
Query: 403 WKYAFKLSALADGTFRVELDEADPLYPRYRTQLALDGEPKADGLKLISKDDGKVILVNTQ 582
++ + FR++++E PL PR+ L +P L S D G +IL + +
Sbjct: 69 -PLLAEIYGIEGNIFRLKINEETPLKPRFEVPDVLTSKPSTVRLISCSGDTGSLILADGK 127
Query: 583 GH-KVIITSEPLKLEFL 630
G K IT+ P K++ +
Sbjct: 128 GDLKCHITANPFKVDLV 144
>AF545045-1|AAN74756.1| 914|Homo sapiens neutral alpha glucosidase
C type 2 protein.
Length = 914
Score = 56.0 bits (129), Expect = 1e-07
Identities = 38/137 (27%), Positives = 67/137 (48%), Gaps = 1/137 (0%)
Frame = +1
Query: 223 AVDKNKFKTCSQSGFCKRLRPFKPEKSQYSLNLDSILVHGNVLSAEVVTIDAADEKRTVL 402
AVDKN F+ C++ F +R + + +KS Y LDS+ + +++ +E V
Sbjct: 15 AVDKNIFRDCNKIAFYRRQKQWLSKKSTYQALLDSVTTDEDSTRFQII-----NEASKV- 68
Query: 403 WKYAFKLSALADGTFRVELDEADPLYPRYRTQLALDGEPKADGLKLISKDDGKVILVNTQ 582
++ + FR++++E PL PR+ L +P L S D G +IL + +
Sbjct: 69 -PLLAEIYGIEGNIFRLKINEETPLKPRFEVPDVLTSKPSTVRLISCSGDTGSLILADGK 127
Query: 583 GH-KVIITSEPLKLEFL 630
G K IT+ P K++ +
Sbjct: 128 GDLKCHITANPFKVDLV 144
>BC093833-1|AAH93833.1| 914|Homo sapiens glucosidase, alpha;
neutral C protein.
Length = 914
Score = 55.6 bits (128), Expect = 1e-07
Identities = 38/137 (27%), Positives = 67/137 (48%), Gaps = 1/137 (0%)
Frame = +1
Query: 223 AVDKNKFKTCSQSGFCKRLRPFKPEKSQYSLNLDSILVHGNVLSAEVVTIDAADEKRTVL 402
AVDKN F+ C++ F +R + + +KS Y LDS+ + +++ +E V
Sbjct: 15 AVDKNIFRDCNKIAFYRRQKQWLSKKSTYRALLDSVTTDEDSTRFQII-----NEASKV- 68
Query: 403 WKYAFKLSALADGTFRVELDEADPLYPRYRTQLALDGEPKADGLKLISKDDGKVILVNTQ 582
++ + FR++++E PL PR+ L +P L S D G +IL + +
Sbjct: 69 -PLLAEIYGIEGNIFRLKINEETPLKPRFEVPDVLTSKPSTVRLISCSGDTGSLILADGK 127
Query: 583 GH-KVIITSEPLKLEFL 630
G K IT+ P K++ +
Sbjct: 128 GDLKCHITANPFKVDLV 144
>BC059406-1|AAH59406.1| 914|Homo sapiens glucosidase, alpha;
neutral C protein.
Length = 914
Score = 55.6 bits (128), Expect = 1e-07
Identities = 38/137 (27%), Positives = 67/137 (48%), Gaps = 1/137 (0%)
Frame = +1
Query: 223 AVDKNKFKTCSQSGFCKRLRPFKPEKSQYSLNLDSILVHGNVLSAEVVTIDAADEKRTVL 402
AVDKN F+ C++ F +R + + +KS Y LDS+ + +++ +E V
Sbjct: 15 AVDKNIFRDCNKIAFYRRQKQWLSKKSTYRALLDSVTTDEDSTRFQII-----NEASKV- 68
Query: 403 WKYAFKLSALADGTFRVELDEADPLYPRYRTQLALDGEPKADGLKLISKDDGKVILVNTQ 582
++ + FR++++E PL PR+ L +P L S D G +IL + +
Sbjct: 69 -PLLAEIYGIEGNIFRLKINEETPLKPRFEVPDVLTSKPSTVRLISCSGDTGSLILADGK 127
Query: 583 GH-KVIITSEPLKLEFL 630
G K IT+ P K++ +
Sbjct: 128 GDLKCHITANPFKVDLV 144
>AK074037-1|BAB84863.1| 925|Homo sapiens FLJ00088 protein protein.
Length = 925
Score = 55.6 bits (128), Expect = 1e-07
Identities = 38/137 (27%), Positives = 67/137 (48%), Gaps = 1/137 (0%)
Frame = +1
Query: 223 AVDKNKFKTCSQSGFCKRLRPFKPEKSQYSLNLDSILVHGNVLSAEVVTIDAADEKRTVL 402
AVDKN F+ C++ F +R + + +KS Y LDS+ + +++ +E V
Sbjct: 26 AVDKNIFRDCNKIAFYRRQKQWLSKKSTYRALLDSVTTDEDSTRFQII-----NEASKV- 79
Query: 403 WKYAFKLSALADGTFRVELDEADPLYPRYRTQLALDGEPKADGLKLISKDDGKVILVNTQ 582
++ + FR++++E PL PR+ L +P L S D G +IL + +
Sbjct: 80 -PLLAEIYGIEGNIFRLKINEETPLKPRFEVPDVLTSKPSTVRLISCSGDTGSLILADGK 138
Query: 583 GH-KVIITSEPLKLEFL 630
G K IT+ P K++ +
Sbjct: 139 GDLKCHITANPFKVDLV 155
>BC065266-1|AAH65266.1| 847|Homo sapiens GANAB protein protein.
Length = 847
Score = 44.4 bits (100), Expect = 4e-04
Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Frame = +1
Query: 448 RVELDEADPLYPRYRTQLALDGEPKADGLKLISKDDGKVILVNTQG-HKVIITSEPLKLE 624
R +DE +P PRYR L +P L + +D+ V L +G +K+I+T+ P +L+
Sbjct: 3 RFRIDELEPRRPRYRVPDVLVADPPIARLSVSGRDENSVELTMAEGPYKIILTARPFRLD 62
Query: 625 FLD 633
L+
Sbjct: 63 LLE 65
>AB210034-1|BAE06116.1| 1537|Homo sapiens C6orf21 variant protein
protein.
Length = 1537
Score = 33.5 bits (73), Expect = 0.69
Identities = 18/63 (28%), Positives = 29/63 (46%)
Frame = -2
Query: 544 KSVLIRLPSVPHPTPAASCILGIEDPLHRAPHGTCHRPALIT*RHISTKLFAFHPQRQW* 365
K + P VP P P++S + ++ +H P G A ++ R S HP+ +
Sbjct: 823 KGMRSETPPVPPPPPSSSAVFRLDQVIHSNPAGIQQALAQLSSRQGSVTAPGGHPRHKPG 882
Query: 364 PPQ 356
PPQ
Sbjct: 883 PPQ 885
>AK092426-1|BAC03887.1| 258|Homo sapiens protein ( Homo sapiens
cDNA FLJ35107 fis, clone PLACE6006871, moderately
similar to SUPPRESSOR PROTEIN SRP40. ).
Length = 258
Score = 32.7 bits (71), Expect = 1.2
Identities = 25/93 (26%), Positives = 44/93 (47%)
Frame = -1
Query: 632 SKNSSFKGSDVMMTLCPCVLTRITFPSSFEISFNPSAFGSPSNASCVLYLGYRGSASSSS 453
S + S S ++ + P + + PSS S +PS+ S S+ S S+SSSS
Sbjct: 40 SSSRSILSSSILSSSIPSSSSSSSSPSSSHSSSSPSSSHSSSSPSSSSSTSSPSSSSSSS 99
Query: 452 TRNVPSASADNLKAYFHKTVRFSSAASMVTTSA 354
+ + PS+S + + SS++S +S+
Sbjct: 100 SSSSPSSSNSSSSSSSSSPSSSSSSSSSSPSSS 132
>BC117319-1|AAI17320.1| 257|Homo sapiens TPRXL protein protein.
Length = 257
Score = 30.7 bits (66), Expect = 4.9
Identities = 23/93 (24%), Positives = 46/93 (49%)
Frame = -1
Query: 632 SKNSSFKGSDVMMTLCPCVLTRITFPSSFEISFNPSAFGSPSNASCVLYLGYRGSASSSS 453
S + S S ++ + P + + PSS S +PS+ S S+ S S+SSSS
Sbjct: 40 SSSRSILSSSILSSSIPSSSSSSSSPSSSHSSSSPSSSHSSSSPSSSSSTSSPSSSSSSS 99
Query: 452 TRNVPSASADNLKAYFHKTVRFSSAASMVTTSA 354
+ + S+++ + + + SS++S ++S+
Sbjct: 100 SSSPSSSNSSSSSSSSSPSSSSSSSSSSPSSSS 132
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,271,886
Number of Sequences: 237096
Number of extensions: 2269634
Number of successful extensions: 8650
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 8451
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8628
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7478817430
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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