Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc29j03
(662 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF145625-1|AAD38600.1| 924|Drosophila melanogaster BcDNA.GH0496... 93 4e-19
AE014298-3155|AAN08997.1| 924|Drosophila melanogaster CG14476-P... 93 4e-19
AE014298-3154|AAN08996.1| 924|Drosophila melanogaster CG14476-P... 93 4e-19
AE014298-3153|AAN08995.1| 924|Drosophila melanogaster CG14476-P... 93 4e-19
AE014298-3152|AAF45432.1| 924|Drosophila melanogaster CG14476-P... 93 4e-19
AE014298-3151|AAG22460.1| 924|Drosophila melanogaster CG14476-P... 93 4e-19
AE014134-1552|AAF52701.1| 219|Drosophila melanogaster CG9298-PA... 32 0.61
AE014298-2500|AAF48681.2| 212|Drosophila melanogaster CG13002-P... 29 5.6
AE014134-11|AAF51568.2| 2833|Drosophila melanogaster CG31973-PB,... 29 5.6
>AF145625-1|AAD38600.1| 924|Drosophila melanogaster BcDNA.GH04962
protein.
Length = 924
Score = 92.7 bits (220), Expect = 4e-19
Identities = 49/153 (32%), Positives = 88/153 (57%)
Frame = +1
Query: 175 VWALVLVAAFVIIGISAVDKNKFKTCSQSGFCKRLRPFKPEKSQYSLNLDSILVHGNVLS 354
+WAL ++A VD FKTC QS FC+R R + S+Y+L ++ + + L+
Sbjct: 11 IWALFVLA-------DGVDPGNFKTCEQSSFCRRSRKIQGSGSKYALIPGTLNTYADSLT 63
Query: 355 AEVVTIDAADEKRTVLWKYAFKLSALADGTFRVELDEADPLYPRYRTQLALDGEPKADGL 534
A++V + + +AFKL AL TFR+++DE PL PRYR + AL G +A +
Sbjct: 64 ADLVNKENHHQ-------FAFKLEALVGSTFRLQIDEKQPLRPRYRVEHALKGPTQAGRI 116
Query: 535 KLISKDDGKVILVNTQGHKVIITSEPLKLEFLD 633
++ + DG+++ + ++ +K +I +P +++F +
Sbjct: 117 RVQRETDGEIV-ITSEKNKAVIHGDPFRIDFFE 148
>AE014298-3155|AAN08997.1| 924|Drosophila melanogaster CG14476-PE,
isoform E protein.
Length = 924
Score = 92.7 bits (220), Expect = 4e-19
Identities = 49/153 (32%), Positives = 88/153 (57%)
Frame = +1
Query: 175 VWALVLVAAFVIIGISAVDKNKFKTCSQSGFCKRLRPFKPEKSQYSLNLDSILVHGNVLS 354
+WAL ++A VD FKTC QS FC+R R + S+Y+L ++ + + L+
Sbjct: 11 IWALFVLA-------DGVDPGNFKTCEQSSFCRRSRKIQGSGSKYALIPGTLNTYADSLT 63
Query: 355 AEVVTIDAADEKRTVLWKYAFKLSALADGTFRVELDEADPLYPRYRTQLALDGEPKADGL 534
A++V + + +AFKL AL TFR+++DE PL PRYR + AL G +A +
Sbjct: 64 ADLVNKENHHQ-------FAFKLEALVGSTFRLQIDEKQPLRPRYRVEHALKGPTQAGRI 116
Query: 535 KLISKDDGKVILVNTQGHKVIITSEPLKLEFLD 633
++ + DG+++ + ++ +K +I +P +++F +
Sbjct: 117 RVQRETDGEIV-ITSEKNKAVIHGDPFRIDFFE 148
>AE014298-3154|AAN08996.1| 924|Drosophila melanogaster CG14476-PD,
isoform D protein.
Length = 924
Score = 92.7 bits (220), Expect = 4e-19
Identities = 49/153 (32%), Positives = 88/153 (57%)
Frame = +1
Query: 175 VWALVLVAAFVIIGISAVDKNKFKTCSQSGFCKRLRPFKPEKSQYSLNLDSILVHGNVLS 354
+WAL ++A VD FKTC QS FC+R R + S+Y+L ++ + + L+
Sbjct: 11 IWALFVLA-------DGVDPGNFKTCEQSSFCRRSRKIQGSGSKYALIPGTLNTYADSLT 63
Query: 355 AEVVTIDAADEKRTVLWKYAFKLSALADGTFRVELDEADPLYPRYRTQLALDGEPKADGL 534
A++V + + +AFKL AL TFR+++DE PL PRYR + AL G +A +
Sbjct: 64 ADLVNKENHHQ-------FAFKLEALVGSTFRLQIDEKQPLRPRYRVEHALKGPTQAGRI 116
Query: 535 KLISKDDGKVILVNTQGHKVIITSEPLKLEFLD 633
++ + DG+++ + ++ +K +I +P +++F +
Sbjct: 117 RVQRETDGEIV-ITSEKNKAVIHGDPFRIDFFE 148
>AE014298-3153|AAN08995.1| 924|Drosophila melanogaster CG14476-PC,
isoform C protein.
Length = 924
Score = 92.7 bits (220), Expect = 4e-19
Identities = 49/153 (32%), Positives = 88/153 (57%)
Frame = +1
Query: 175 VWALVLVAAFVIIGISAVDKNKFKTCSQSGFCKRLRPFKPEKSQYSLNLDSILVHGNVLS 354
+WAL ++A VD FKTC QS FC+R R + S+Y+L ++ + + L+
Sbjct: 11 IWALFVLA-------DGVDPGNFKTCEQSSFCRRSRKIQGSGSKYALIPGTLNTYADSLT 63
Query: 355 AEVVTIDAADEKRTVLWKYAFKLSALADGTFRVELDEADPLYPRYRTQLALDGEPKADGL 534
A++V + + +AFKL AL TFR+++DE PL PRYR + AL G +A +
Sbjct: 64 ADLVNKENHHQ-------FAFKLEALVGSTFRLQIDEKQPLRPRYRVEHALKGPTQAGRI 116
Query: 535 KLISKDDGKVILVNTQGHKVIITSEPLKLEFLD 633
++ + DG+++ + ++ +K +I +P +++F +
Sbjct: 117 RVQRETDGEIV-ITSEKNKAVIHGDPFRIDFFE 148
>AE014298-3152|AAF45432.1| 924|Drosophila melanogaster CG14476-PB,
isoform B protein.
Length = 924
Score = 92.7 bits (220), Expect = 4e-19
Identities = 49/153 (32%), Positives = 88/153 (57%)
Frame = +1
Query: 175 VWALVLVAAFVIIGISAVDKNKFKTCSQSGFCKRLRPFKPEKSQYSLNLDSILVHGNVLS 354
+WAL ++A VD FKTC QS FC+R R + S+Y+L ++ + + L+
Sbjct: 11 IWALFVLA-------DGVDPGNFKTCEQSSFCRRSRKIQGSGSKYALIPGTLNTYADSLT 63
Query: 355 AEVVTIDAADEKRTVLWKYAFKLSALADGTFRVELDEADPLYPRYRTQLALDGEPKADGL 534
A++V + + +AFKL AL TFR+++DE PL PRYR + AL G +A +
Sbjct: 64 ADLVNKENHHQ-------FAFKLEALVGSTFRLQIDEKQPLRPRYRVEHALKGPTQAGRI 116
Query: 535 KLISKDDGKVILVNTQGHKVIITSEPLKLEFLD 633
++ + DG+++ + ++ +K +I +P +++F +
Sbjct: 117 RVQRETDGEIV-ITSEKNKAVIHGDPFRIDFFE 148
>AE014298-3151|AAG22460.1| 924|Drosophila melanogaster CG14476-PA,
isoform A protein.
Length = 924
Score = 92.7 bits (220), Expect = 4e-19
Identities = 49/153 (32%), Positives = 88/153 (57%)
Frame = +1
Query: 175 VWALVLVAAFVIIGISAVDKNKFKTCSQSGFCKRLRPFKPEKSQYSLNLDSILVHGNVLS 354
+WAL ++A VD FKTC QS FC+R R + S+Y+L ++ + + L+
Sbjct: 11 IWALFVLA-------DGVDPGNFKTCEQSSFCRRSRKIQGSGSKYALIPGTLNTYADSLT 63
Query: 355 AEVVTIDAADEKRTVLWKYAFKLSALADGTFRVELDEADPLYPRYRTQLALDGEPKADGL 534
A++V + + +AFKL AL TFR+++DE PL PRYR + AL G +A +
Sbjct: 64 ADLVNKENHHQ-------FAFKLEALVGSTFRLQIDEKQPLRPRYRVEHALKGPTQAGRI 116
Query: 535 KLISKDDGKVILVNTQGHKVIITSEPLKLEFLD 633
++ + DG+++ + ++ +K +I +P +++F +
Sbjct: 117 RVQRETDGEIV-ITSEKNKAVIHGDPFRIDFFE 148
>AE014134-1552|AAF52701.1| 219|Drosophila melanogaster CG9298-PA
protein.
Length = 219
Score = 32.3 bits (70), Expect = 0.61
Identities = 29/104 (27%), Positives = 45/104 (43%), Gaps = 5/104 (4%)
Frame = +1
Query: 313 LNLDSILVHGNVLSAEVVTIDAADEKRTVL---WKYAFKLS-ALADGTFRVELDEADPLY 480
+N+ +LV N + VT+D + RT L Y L + T ++ A Y
Sbjct: 57 INVGHVLVAVNGMPVNGVTLDDGRDVRTTLDAPENYPINLKFSRPKMTTNEKIFLASMFY 116
Query: 481 PRYRTQLALDGEPKADGLKLISKDDGKVILVNT-QGHKVIITSE 609
P + L EPK+ G++++ D + T G K II SE
Sbjct: 117 PLFAIASQLSPEPKSSGIEILEADTFTLHCFQTLTGIKFIIISE 160
>AE014298-2500|AAF48681.2| 212|Drosophila melanogaster CG13002-PA
protein.
Length = 212
Score = 29.1 bits (62), Expect = 5.6
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = +2
Query: 362 WLPLTLRMKSEQFCGNMPSSYQRW 433
W+P TL MK + FC ++ + + W
Sbjct: 118 WIPTTLAMKRDSFCMSLSNPMELW 141
>AE014134-11|AAF51568.2| 2833|Drosophila melanogaster CG31973-PB,
isoform B protein.
Length = 2833
Score = 29.1 bits (62), Expect = 5.6
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = -1
Query: 659 RTTATSPXWSKNSSFKGSDVMMTLCPCVLTRITFPSSF 546
RTT+++P +S + K V +T P + T PSSF
Sbjct: 2272 RTTSSTPDFSTPRTLKTPPVSLTTVPTIPTGTATPSSF 2309
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,013,740
Number of Sequences: 53049
Number of extensions: 703023
Number of successful extensions: 1824
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1737
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1823
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2848092300
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -