Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc29j01
         (311 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   0.99 
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    21   4.0  
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    21   4.0  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    21   4.0  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    20   6.9  
AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine recombi...    19   9.2  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.6 bits (46), Expect = 0.99
 Identities = 9/35 (25%), Positives = 18/35 (51%)
 Frame = -1

Query: 311 FFFCFSYLIFLYTYFIPVIGFFA*ANHLLCRFFLI 207
           F++ F  L+ +Y ++   I F      LLC ++ +
Sbjct: 103 FYYAFIILLCVYYFYYAFIIFTVHLLFLLCIYYFV 137



 Score = 19.8 bits (39), Expect = 6.9
 Identities = 8/34 (23%), Positives = 15/34 (44%)
 Frame = -1

Query: 311 FFFCFSYLIFLYTYFIPVIGFFA*ANHLLCRFFL 210
           +F+C S    ++  F+   G+F       C F +
Sbjct: 58  YFYCVSITFNVHLLFLLCSGYFTVHLLFYCPFII 91


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 20.6 bits (41), Expect = 4.0
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -3

Query: 138 FNVHNF*ALYVLILH 94
           + +H F  LYV++LH
Sbjct: 169 YTLHLFCVLYVVLLH 183


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 20.6 bits (41), Expect = 4.0
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -1

Query: 293 YLIFLYTYFIPVI 255
           Y  F YTYF+ VI
Sbjct: 153 YFQFYYTYFLCVI 165


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 20.6 bits (41), Expect = 4.0
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -3

Query: 138 FNVHNF*ALYVLILH 94
           + +H F  LYV++LH
Sbjct: 169 YTLHLFCVLYVVLLH 183


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 19.8 bits (39), Expect = 6.9
 Identities = 8/15 (53%), Positives = 11/15 (73%), Gaps = 1/15 (6%)
 Frame = -1

Query: 305 FCFSYLIFLYT-YFI 264
           F F Y I+L+T Y+I
Sbjct: 145 FVFCYFIYLFTVYYI 159


>AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine
           recombinase protein.
          Length = 340

 Score = 19.4 bits (38), Expect = 9.2
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = -1

Query: 119 KPCMCLFCTLSLFM 78
           KP +C+  TLS ++
Sbjct: 223 KPLLCVVSTLSCYL 236


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 51,876
Number of Sequences: 336
Number of extensions: 816
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  5730534
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)