BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc29i16
(561 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC050411-1|AAH50411.1| 349|Homo sapiens phosphotriesterase rela... 90 4e-18
BC015092-1|AAH15092.1| 349|Homo sapiens phosphotriesterase rela... 90 4e-18
AL360230-2|CAH73146.1| 349|Homo sapiens phosphotriesterase rela... 90 4e-18
AF212237-1|AAK14923.1| 349|Homo sapiens HPHRP protein. 90 4e-18
AB209629-1|BAD92866.1| 843|Homo sapiens myosin VIIA variant pro... 35 0.23
U55208-1|AAC50927.1| 2175|Homo sapiens myosin VIIa protein. 31 2.1
U39226-1|AAB03679.1| 2215|Homo sapiens myosin VIIA protein. 31 2.1
>BC050411-1|AAH50411.1| 349|Homo sapiens phosphotriesterase related
protein.
Length = 349
Score = 90.2 bits (214), Expect = 4e-18
Identities = 47/113 (41%), Positives = 68/113 (60%)
Frame = +2
Query: 212 LNKMTSKVETVLGPVPISALGRTLTHEHLAMTFTHFYREPPKQIVDVFENPFCLEKSGFL 391
++ ++ KV+TVLG V S LGRTLTHEHLAMTF Y PP + + P ++ ++
Sbjct: 1 MSSLSGKVQTVLGLVEPSKLGRTLTHEHLAMTFDCCYCPPPPCQEAISKEPIVMKNLYWI 60
Query: 392 RQFPYSSKGNLVLNDHAAKEAVVNDVIAYKKFGGGTIVENSTVGLDRDVNFYK 550
++ YS K NL LN EA+ +++ +K GGG +VEN+T G+ RD K
Sbjct: 61 QKNAYSHKENLQLNQET--EAIKEELLYFKANGGGALVENTTTGISRDTQTLK 111
>BC015092-1|AAH15092.1| 349|Homo sapiens phosphotriesterase related
protein.
Length = 349
Score = 90.2 bits (214), Expect = 4e-18
Identities = 47/113 (41%), Positives = 68/113 (60%)
Frame = +2
Query: 212 LNKMTSKVETVLGPVPISALGRTLTHEHLAMTFTHFYREPPKQIVDVFENPFCLEKSGFL 391
++ ++ KV+TVLG V S LGRTLTHEHLAMTF Y PP + + P ++ ++
Sbjct: 1 MSSLSGKVQTVLGLVEPSKLGRTLTHEHLAMTFDCCYCPPPPCQEAISKEPIVMKNLYWI 60
Query: 392 RQFPYSSKGNLVLNDHAAKEAVVNDVIAYKKFGGGTIVENSTVGLDRDVNFYK 550
++ YS K NL LN EA+ +++ +K GGG +VEN+T G+ RD K
Sbjct: 61 QKNAYSHKENLQLNQET--EAIKEELLYFKANGGGALVENTTTGISRDTQTLK 111
>AL360230-2|CAH73146.1| 349|Homo sapiens phosphotriesterase related
protein.
Length = 349
Score = 90.2 bits (214), Expect = 4e-18
Identities = 47/113 (41%), Positives = 68/113 (60%)
Frame = +2
Query: 212 LNKMTSKVETVLGPVPISALGRTLTHEHLAMTFTHFYREPPKQIVDVFENPFCLEKSGFL 391
++ ++ KV+TVLG V S LGRTLTHEHLAMTF Y PP + + P ++ ++
Sbjct: 1 MSSLSGKVQTVLGLVEPSKLGRTLTHEHLAMTFDCCYCPPPPCQEAISKEPIVMKNLYWI 60
Query: 392 RQFPYSSKGNLVLNDHAAKEAVVNDVIAYKKFGGGTIVENSTVGLDRDVNFYK 550
++ YS K NL LN EA+ +++ +K GGG +VEN+T G+ RD K
Sbjct: 61 QKNAYSHKENLQLNQET--EAIKEELLYFKANGGGALVENTTTGISRDTQTLK 111
>AF212237-1|AAK14923.1| 349|Homo sapiens HPHRP protein.
Length = 349
Score = 90.2 bits (214), Expect = 4e-18
Identities = 47/113 (41%), Positives = 68/113 (60%)
Frame = +2
Query: 212 LNKMTSKVETVLGPVPISALGRTLTHEHLAMTFTHFYREPPKQIVDVFENPFCLEKSGFL 391
++ ++ KV+TVLG V S LGRTLTHEHLAMTF Y PP + + P ++ ++
Sbjct: 1 MSSLSGKVQTVLGLVEPSKLGRTLTHEHLAMTFDCCYCPPPPCQEAISKEPIVMKNLYWI 60
Query: 392 RQFPYSSKGNLVLNDHAAKEAVVNDVIAYKKFGGGTIVENSTVGLDRDVNFYK 550
++ YS K NL LN EA+ +++ +K GGG +VEN+T G+ RD K
Sbjct: 61 QKNAYSHKENLQLNQET--EAIKEELLYFKANGGGALVENTTTGISRDTQTLK 111
>AB209629-1|BAD92866.1| 843|Homo sapiens myosin VIIA variant
protein.
Length = 843
Score = 34.7 bits (76), Expect = 0.23
Identities = 21/56 (37%), Positives = 32/56 (57%)
Frame = +2
Query: 296 LAMTFTHFYREPPKQIVDVFENPFCLEKSGFLRQFPYSSKGNLVLNDHAAKEAVVN 463
L +TF R+ K +V + +NP E+SGFL +KG+L++ DH E V+N
Sbjct: 209 LVVTFLEGLRKRSKYVVALQDNPNPGEESGFLS----FAKGDLIILDHDTGEQVMN 260
>U55208-1|AAC50927.1| 2175|Homo sapiens myosin VIIa protein.
Length = 2175
Score = 31.5 bits (68), Expect = 2.1
Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Frame = +2
Query: 296 LAMTFTHFYREPPKQIVDVFENPFCL-EKSGFLRQFPYSSKGNLVLNDHAAKEAVVN 463
L +TF R+ K +V + +NP E+SGFL +KG+L++ DH E V+N
Sbjct: 1555 LVVTFLEGLRKRSKYVVALQDNPNPAGEESGFLS----FAKGDLIILDHDTGEQVMN 1607
>U39226-1|AAB03679.1| 2215|Homo sapiens myosin VIIA protein.
Length = 2215
Score = 31.5 bits (68), Expect = 2.1
Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Frame = +2
Query: 296 LAMTFTHFYREPPKQIVDVFENPFCL-EKSGFLRQFPYSSKGNLVLNDHAAKEAVVN 463
L +TF R+ K +V + +NP E+SGFL +KG+L++ DH E V+N
Sbjct: 1593 LVVTFLEGLRKRSKYVVALQDNPNPAGEESGFLS----FAKGDLIILDHDTGEQVMN 1645
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,545,984
Number of Sequences: 237096
Number of extensions: 1715734
Number of successful extensions: 2700
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2631
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2694
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5646880600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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