Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc29i14
         (497 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X05279-1|CAA28890.2|  639|Drosophila melanogaster protein kinase...    32   0.50 
X05076-1|CAA28736.1|  639|Drosophila melanogaster protein ( Dros...    32   0.50 
AE013599-2373|AAF57932.1|  670|Drosophila melanogaster CG6622-PA...    32   0.50 
AY095003-1|AAM11331.1|  679|Drosophila melanogaster GH03188p pro...    30   1.5  
AE013599-2372|AAF57933.1|  679|Drosophila melanogaster CG6622-PB...    30   1.5  
AY113652-1|AAM29657.1|  918|Drosophila melanogaster SD14970p pro...    29   3.5  
AE014296-1695|AAF50237.1|  918|Drosophila melanogaster CG3335-PA...    29   3.5  

>X05279-1|CAA28890.2|  639|Drosophila melanogaster protein kinase C
           protein.
          Length = 639

 Score = 31.9 bits (69), Expect = 0.50
 Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
 Frame = -2

Query: 388 FSLGD-CIPSYVHWQLVFGVHCGRKV--FEKYPIRCQIVVFVTHLRCLKFSQFIC 233
           F++ D C  +    Q  F  HC   +  F K   +CQ+  +V H RC ++  FIC
Sbjct: 41  FNVKDHCFIARFFKQPTFCSHCKDFIWGFGKQGFQCQVCSYVVHKRCHEYVTFIC 95


>X05076-1|CAA28736.1|  639|Drosophila melanogaster protein (
           Drosophila melanogastermRNA for protein kinase C (PKC).
           ).
          Length = 639

 Score = 31.9 bits (69), Expect = 0.50
 Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
 Frame = -2

Query: 388 FSLGD-CIPSYVHWQLVFGVHCGRKV--FEKYPIRCQIVVFVTHLRCLKFSQFIC 233
           F++ D C  +    Q  F  HC   +  F K   +CQ+  +V H RC ++  FIC
Sbjct: 41  FNVKDHCFIARFFKQPTFCSHCKDFIWGFGKQGFQCQVCSYVVHKRCHEYVTFIC 95


>AE013599-2373|AAF57932.1|  670|Drosophila melanogaster CG6622-PA,
           isoform A protein.
          Length = 670

 Score = 31.9 bits (69), Expect = 0.50
 Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
 Frame = -2

Query: 388 FSLGD-CIPSYVHWQLVFGVHCGRKV--FEKYPIRCQIVVFVTHLRCLKFSQFIC 233
           F++ D C  +    Q  F  HC   +  F K   +CQ+  +V H RC ++  FIC
Sbjct: 41  FNVKDHCFIARFFKQPTFCSHCKDFIWGFGKQGFQCQVCSYVVHKRCHEYVTFIC 95


>AY095003-1|AAM11331.1|  679|Drosophila melanogaster GH03188p
           protein.
          Length = 679

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = -2

Query: 313 FEKYPIRCQIVVFVTHLRCLKFSQFIC 233
           F K   +CQ+  +V H RC ++  FIC
Sbjct: 78  FGKQGFQCQVCSYVVHKRCHEYVTFIC 104


>AE013599-2372|AAF57933.1|  679|Drosophila melanogaster CG6622-PB,
           isoform B protein.
          Length = 679

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = -2

Query: 313 FEKYPIRCQIVVFVTHLRCLKFSQFIC 233
           F K   +CQ+  +V H RC ++  FIC
Sbjct: 78  FGKQGFQCQVCSYVVHKRCHEYVTFIC 104


>AY113652-1|AAM29657.1|  918|Drosophila melanogaster SD14970p
           protein.
          Length = 918

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 17/53 (32%), Positives = 22/53 (41%)
 Frame = +2

Query: 236 NKLTKFQTAKMGDKDDYLTSYRVFFENFAATVNPEDQLPVNIAGYTITEAELP 394
           N   K Q   +  +DD   S R+FF N A T   ED   +      + E  LP
Sbjct: 344 NAKWKHQQDSLSKEDDISESGRIFFRNLAYTTTEEDLRKLFEQFGPVVEVNLP 396


>AE014296-1695|AAF50237.1|  918|Drosophila melanogaster CG3335-PA
           protein.
          Length = 918

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 17/53 (32%), Positives = 22/53 (41%)
 Frame = +2

Query: 236 NKLTKFQTAKMGDKDDYLTSYRVFFENFAATVNPEDQLPVNIAGYTITEAELP 394
           N   K Q   +  +DD   S R+FF N A T   ED   +      + E  LP
Sbjct: 344 NAKWKHQQDSLSKEDDISESGRIFFRNLAYTTTEEDLRKLFEQFGPVVEVNLP 396


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,846,142
Number of Sequences: 53049
Number of extensions: 378215
Number of successful extensions: 929
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 921
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 929
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1763278080
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)