Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc29i11
         (229 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT025081-1|ABE73252.1|  721|Drosophila melanogaster IP14890p pro...    27   3.5  
AE014297-4158|AAF56734.3| 3298|Drosophila melanogaster CG18437-P...    27   3.5  
AE013599-2746|AAO41351.1| 1674|Drosophila melanogaster CG15086-P...    27   3.5  
AE013599-2744|AAO41349.1| 2087|Drosophila melanogaster CG15086-P...    27   3.5  
AE013599-2743|AAF57655.1| 1908|Drosophila melanogaster CG15086-P...    27   3.5  
BT029111-1|ABJ17044.1|  935|Drosophila melanogaster IP14884p pro...    26   8.1  
AE014297-2214|AAF55320.1| 1298|Drosophila melanogaster CG14897-P...    26   8.1  

>BT025081-1|ABE73252.1|  721|Drosophila melanogaster IP14890p
           protein.
          Length = 721

 Score = 27.1 bits (57), Expect = 3.5
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = +2

Query: 137 TRSSKPRSRYLRARPRTGRQTLHATTPTKKK 229
           TRSS P  +YL+  P+    T  AT+   +K
Sbjct: 451 TRSSDPLKKYLKPGPQKATSTTSATSKGSRK 481


>AE014297-4158|AAF56734.3| 3298|Drosophila melanogaster CG18437-PA
            protein.
          Length = 3298

 Score = 27.1 bits (57), Expect = 3.5
 Identities = 13/38 (34%), Positives = 23/38 (60%)
 Frame = +2

Query: 116  NVKHCVVTRSSKPRSRYLRARPRTGRQTLHATTPTKKK 229
            NV+  ++T SSKP +   R+  +   Q+   T+P+K+K
Sbjct: 1639 NVEPTIIT-SSKPHTSRARSTRKVSEQSSTQTSPSKRK 1675


>AE013599-2746|AAO41351.1| 1674|Drosophila melanogaster CG15086-PD,
           isoform D protein.
          Length = 1674

 Score = 27.1 bits (57), Expect = 3.5
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = +2

Query: 137 TRSSKPRSRYLRARPRTGRQTLHATTPTKKK 229
           TRSS P  +YL+  P+    T  AT+   +K
Sbjct: 392 TRSSDPLKKYLKPGPQKATSTTSATSKGSRK 422


>AE013599-2744|AAO41349.1| 2087|Drosophila melanogaster CG15086-PB,
           isoform B protein.
          Length = 2087

 Score = 27.1 bits (57), Expect = 3.5
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = +2

Query: 137 TRSSKPRSRYLRARPRTGRQTLHATTPTKKK 229
           TRSS P  +YL+  P+    T  AT+   +K
Sbjct: 392 TRSSDPLKKYLKPGPQKATSTTSATSKGSRK 422


>AE013599-2743|AAF57655.1| 1908|Drosophila melanogaster CG15086-PA,
           isoform A protein.
          Length = 1908

 Score = 27.1 bits (57), Expect = 3.5
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = +2

Query: 137 TRSSKPRSRYLRARPRTGRQTLHATTPTKKK 229
           TRSS P  +YL+  P+    T  AT+   +K
Sbjct: 392 TRSSDPLKKYLKPGPQKATSTTSATSKGSRK 422


>BT029111-1|ABJ17044.1|  935|Drosophila melanogaster IP14884p
           protein.
          Length = 935

 Score = 25.8 bits (54), Expect = 8.1
 Identities = 12/23 (52%), Positives = 17/23 (73%)
 Frame = +1

Query: 121 KTLRRNSLEQAAVSLPARPSSHR 189
           ++LRR+S+EQ AVS   R S+ R
Sbjct: 383 RSLRRHSVEQRAVSTTPRRSTRR 405


>AE014297-2214|AAF55320.1| 1298|Drosophila melanogaster CG14897-PB,
           isoform B protein.
          Length = 1298

 Score = 25.8 bits (54), Expect = 8.1
 Identities = 12/23 (52%), Positives = 17/23 (73%)
 Frame = +1

Query: 121 KTLRRNSLEQAAVSLPARPSSHR 189
           ++LRR+S+EQ AVS   R S+ R
Sbjct: 742 RSLRRHSVEQRAVSTTPRRSTRR 764


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,077,793
Number of Sequences: 53049
Number of extensions: 132639
Number of successful extensions: 306
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 303
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 306
length of database: 24,988,368
effective HSP length: 55
effective length of database: 22,070,673
effective search space used: 441413460
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)