Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc29i08
         (506 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T...    25   1.5  
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T...    25   1.5  
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    23   5.9  

>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
           phosphatase protein.
          Length = 1977

 Score = 25.0 bits (52), Expect = 1.5
 Identities = 10/31 (32%), Positives = 21/31 (67%)
 Frame = +2

Query: 281 EKIKSLTKNVNELQNMEKRVMKSRQNFLNYG 373
           EK++SLT+ +N+     ++ +K+++N L  G
Sbjct: 754 EKLQSLTQELNQSDEELEQAIKNQRNLLAAG 784


>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
           phosphatase protein.
          Length = 1978

 Score = 25.0 bits (52), Expect = 1.5
 Identities = 10/31 (32%), Positives = 21/31 (67%)
 Frame = +2

Query: 281 EKIKSLTKNVNELQNMEKRVMKSRQNFLNYG 373
           EK++SLT+ +N+     ++ +K+++N L  G
Sbjct: 754 EKLQSLTQELNQSDEELEQAIKNQRNLLAAG 784


>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
           polyprotein protein.
          Length = 1726

 Score = 23.0 bits (47), Expect = 5.9
 Identities = 10/44 (22%), Positives = 25/44 (56%)
 Frame = +2

Query: 131 IKRCCFTSSVYFFKMFSKNYNASQSQRDLKSKLEEINRHKQKIT 262
           +KR    +++  F+ F+K+++A+     + S+LE++     + T
Sbjct: 13  LKRVEIMNTLQDFEEFTKSFDATIDAYQIPSRLEQLEELVSEFT 56


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 436,307
Number of Sequences: 2352
Number of extensions: 8668
Number of successful extensions: 18
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 45668772
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)