Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc29i03
(683 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC069229-1|AAH69229.1| 476|Homo sapiens TIGD5 protein protein. 30 6.7
BC032632-1|AAH32632.1| 274|Homo sapiens TIGD5 protein protein. 30 6.7
AK223583-1|BAD97303.1| 593|Homo sapiens tigger transposable ele... 30 6.7
AK027832-1|BAB55398.1| 274|Homo sapiens protein ( Homo sapiens ... 30 6.7
U72342-1|AAC51111.1| 410|Homo sapiens platelet activating facto... 30 8.8
L13387-1|AAA02882.1| 288|Homo sapiens Miller-Dieker lissencepha... 30 8.8
L13386-1|AAA02881.1| 410|Homo sapiens Miller-Dieker lissencepha... 30 8.8
L13385-1|AAA02880.1| 410|Homo sapiens Miller-Dieker lissencepha... 30 8.8
BC064638-1|AAH64638.1| 410|Homo sapiens platelet-activating fac... 30 8.8
AF400434-1|AAK92483.1| 410|Homo sapiens platelet-activating fac... 30 8.8
AF208837-1|AAL34972.1| 410|Homo sapiens Miller-Dieker lissencep... 30 8.8
>BC069229-1|AAH69229.1| 476|Homo sapiens TIGD5 protein protein.
Length = 476
Score = 30.3 bits (65), Expect = 6.7
Identities = 16/50 (32%), Positives = 23/50 (46%)
Frame = +2
Query: 305 ASFEHSDDSGASNTAIRDLNGQAVKPLSGSAPSVRVSALGSVSGNDETKD 454
A + H DD G R+ G A+ P + AP+ SA+G +E D
Sbjct: 364 AEWLHLDDDGGPPEGCREEVGPALPPAAPPAPASLPSAIGGGEDEEEATD 413
>BC032632-1|AAH32632.1| 274|Homo sapiens TIGD5 protein protein.
Length = 274
Score = 30.3 bits (65), Expect = 6.7
Identities = 16/50 (32%), Positives = 23/50 (46%)
Frame = +2
Query: 305 ASFEHSDDSGASNTAIRDLNGQAVKPLSGSAPSVRVSALGSVSGNDETKD 454
A + H DD G R+ G A+ P + AP+ SA+G +E D
Sbjct: 162 AEWLHLDDDGGPPEGCREEVGPALPPAAPPAPASLPSAIGGGEDEEEATD 211
>AK223583-1|BAD97303.1| 593|Homo sapiens tigger transposable
element derived 5 variant protein.
Length = 593
Score = 30.3 bits (65), Expect = 6.7
Identities = 16/50 (32%), Positives = 23/50 (46%)
Frame = +2
Query: 305 ASFEHSDDSGASNTAIRDLNGQAVKPLSGSAPSVRVSALGSVSGNDETKD 454
A + H DD G R+ G A+ P + AP+ SA+G +E D
Sbjct: 481 AEWLHLDDDGGPPEGCREEVGPALPPAAPPAPASLPSAIGGGEDEEEATD 530
>AK027832-1|BAB55398.1| 274|Homo sapiens protein ( Homo sapiens
cDNA FLJ14926 fis, clone PLACE1008947. ).
Length = 274
Score = 30.3 bits (65), Expect = 6.7
Identities = 16/50 (32%), Positives = 23/50 (46%)
Frame = +2
Query: 305 ASFEHSDDSGASNTAIRDLNGQAVKPLSGSAPSVRVSALGSVSGNDETKD 454
A + H DD G R+ G A+ P + AP+ SA+G +E D
Sbjct: 162 AEWLHLDDDGGPPEGCREEVGPALPPAAPPAPASLPSAIGGGEDEEEATD 211
>U72342-1|AAC51111.1| 410|Homo sapiens platelet activating factor
acetylhydrolase, brain isoform, 45 kDa subunit protein.
Length = 410
Score = 29.9 bits (64), Expect = 8.8
Identities = 11/42 (26%), Positives = 20/42 (47%)
Frame = -3
Query: 291 LHFEHDNHILCTCFFDIISNLFDIANLDIFKTQHFNKHRHES 166
+ F+H +L +C D+ L+D + +T H + H S
Sbjct: 156 ISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSS 197
>L13387-1|AAA02882.1| 288|Homo sapiens Miller-Dieker lissencephaly
protein protein.
Length = 288
Score = 29.9 bits (64), Expect = 8.8
Identities = 11/42 (26%), Positives = 20/42 (47%)
Frame = -3
Query: 291 LHFEHDNHILCTCFFDIISNLFDIANLDIFKTQHFNKHRHES 166
+ F+H +L +C D+ L+D + +T H + H S
Sbjct: 34 ISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSS 75
>L13386-1|AAA02881.1| 410|Homo sapiens Miller-Dieker lissencephaly
protein protein.
Length = 410
Score = 29.9 bits (64), Expect = 8.8
Identities = 11/42 (26%), Positives = 20/42 (47%)
Frame = -3
Query: 291 LHFEHDNHILCTCFFDIISNLFDIANLDIFKTQHFNKHRHES 166
+ F+H +L +C D+ L+D + +T H + H S
Sbjct: 156 ISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSS 197
>L13385-1|AAA02880.1| 410|Homo sapiens Miller-Dieker lissencephaly
protein protein.
Length = 410
Score = 29.9 bits (64), Expect = 8.8
Identities = 11/42 (26%), Positives = 20/42 (47%)
Frame = -3
Query: 291 LHFEHDNHILCTCFFDIISNLFDIANLDIFKTQHFNKHRHES 166
+ F+H +L +C D+ L+D + +T H + H S
Sbjct: 156 ISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSS 197
>BC064638-1|AAH64638.1| 410|Homo sapiens platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit 45kDa
protein.
Length = 410
Score = 29.9 bits (64), Expect = 8.8
Identities = 11/42 (26%), Positives = 20/42 (47%)
Frame = -3
Query: 291 LHFEHDNHILCTCFFDIISNLFDIANLDIFKTQHFNKHRHES 166
+ F+H +L +C D+ L+D + +T H + H S
Sbjct: 156 ISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSS 197
>AF400434-1|AAK92483.1| 410|Homo sapiens platelet-activating factor
acetyl hydrolase isoform Ib alpha subunit protein.
Length = 410
Score = 29.9 bits (64), Expect = 8.8
Identities = 11/42 (26%), Positives = 20/42 (47%)
Frame = -3
Query: 291 LHFEHDNHILCTCFFDIISNLFDIANLDIFKTQHFNKHRHES 166
+ F+H +L +C D+ L+D + +T H + H S
Sbjct: 156 ISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSS 197
>AF208837-1|AAL34972.1| 410|Homo sapiens Miller-Dieker
lissencephaly protein protein.
Length = 410
Score = 29.9 bits (64), Expect = 8.8
Identities = 11/42 (26%), Positives = 20/42 (47%)
Frame = -3
Query: 291 LHFEHDNHILCTCFFDIISNLFDIANLDIFKTQHFNKHRHES 166
+ F+H +L +C D+ L+D + +T H + H S
Sbjct: 156 ISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSS 197
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,826,084
Number of Sequences: 237096
Number of extensions: 2099806
Number of successful extensions: 4445
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 4169
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4445
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7783251346
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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