Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc29i02
(742 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q14240 Cluster: Eukaryotic initiation factor 4A-II; n=3... 321 1e-86
UniRef50_P38919 Cluster: Eukaryotic initiation factor 4A-III; n=... 282 7e-75
UniRef50_A2AAP7 Cluster: DEAD (Asp-Glu-Ala-Asp) box polypeptide ... 228 1e-58
UniRef50_A0D232 Cluster: Chromosome undetermined scaffold_35, wh... 226 4e-58
UniRef50_P39517 Cluster: ATP-dependent RNA helicase DHH1; n=103;... 185 9e-46
UniRef50_Q4T4A9 Cluster: Chromosome undetermined SCAF9757, whole... 179 8e-44
UniRef50_Q8XKJ8 Cluster: ATP-dependent RNA helicase; n=12; Clost... 175 1e-42
UniRef50_A0BEU9 Cluster: Chromosome undetermined scaffold_102, w... 175 1e-42
UniRef50_A4FZ46 Cluster: DEAD/DEAH box helicase domain protein; ... 173 4e-42
UniRef50_Q725W5 Cluster: ATP-dependent RNA helicase, DEAD/DEAH f... 172 7e-42
UniRef50_Q5KJI2 Cluster: ATP-dependent RNA helicase DHH1; n=4; D... 172 7e-42
UniRef50_Q67NW1 Cluster: ATP-dependent RNA helicase; n=5; Firmic... 170 3e-41
UniRef50_Q8SQM5 Cluster: ATP-dependent RNA helicase eIF4A; n=1; ... 170 4e-41
UniRef50_Q4SP80 Cluster: Chromosome 15 SCAF14542, whole genome s... 166 4e-40
UniRef50_A2SQE1 Cluster: DEAD/DEAH box helicase domain protein; ... 163 3e-39
UniRef50_Q81VG0 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 160 4e-38
UniRef50_A7HDE9 Cluster: DEAD/DEAH box helicase domain protein; ... 159 5e-38
UniRef50_Q9KLE2 Cluster: ATP-dependent RNA helicase DeaD; n=35; ... 158 1e-37
UniRef50_Q8YXJ0 Cluster: ATP-dependent RNA helicase; n=11; Cyano... 158 1e-37
UniRef50_Q9KAA6 Cluster: ATP-dependent RNA helicase; n=5; Firmic... 157 3e-37
UniRef50_A2DVG1 Cluster: DEAD/DEAH box helicase family protein; ... 156 5e-37
UniRef50_P96614 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 156 5e-37
UniRef50_Q9S531 Cluster: DEAD-box protein; n=4; Cystobacterineae... 156 6e-37
UniRef50_Q0E2Q3 Cluster: Putative eukaryotic initiation factor 4... 155 8e-37
UniRef50_A6NQG8 Cluster: Putative uncharacterized protein; n=2; ... 155 1e-36
UniRef50_Q5L3G9 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 155 1e-36
UniRef50_Q7UNV7 Cluster: ATP-dependent RNA helicase; n=2; Planct... 154 2e-36
UniRef50_Q6AMK6 Cluster: Probable ATP-dependent RNA helicase; n=... 153 3e-36
UniRef50_A2TP65 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 153 3e-36
UniRef50_Q1QYG3 Cluster: DEAD/DEAH box helicase-like protein; n=... 153 4e-36
UniRef50_A2EPG4 Cluster: DEAD/DEAH box helicase family protein; ... 151 2e-35
UniRef50_Q3AFI3 Cluster: ATP-dependent RNA helicase, DEAD box fa... 151 2e-35
UniRef50_Q1MY97 Cluster: DEAD/DEAH box helicase-like protein; n=... 151 2e-35
UniRef50_Q2NEZ7 Cluster: Predicted helicase; n=6; cellular organ... 150 3e-35
UniRef50_Q98RE0 Cluster: ATP-DEPENDENT RNA HELICASE; n=1; Mycopl... 150 4e-35
UniRef50_Q484Q1 Cluster: RNA helicase DeaD; n=1; Colwellia psych... 150 4e-35
UniRef50_Q11UP8 Cluster: ATP-dependent RNA helicase; n=1; Cytoph... 149 5e-35
UniRef50_A6TUK6 Cluster: DEAD/DEAH box helicase domain protein; ... 149 5e-35
UniRef50_Q5NZY2 Cluster: ATP-dependent RNA helicase DeaD; n=18; ... 149 7e-35
UniRef50_Q3AX69 Cluster: DEAD/DEAH box helicase-like; n=15; Cyan... 149 7e-35
UniRef50_O83749 Cluster: ATP-dependent RNA helicase; n=2; Trepon... 149 7e-35
UniRef50_A0Z0M4 Cluster: ATP-dependent RNA helicase; n=1; marine... 149 7e-35
UniRef50_A7HKQ8 Cluster: DEAD/DEAH box helicase domain protein; ... 149 9e-35
UniRef50_Q6MN67 Cluster: ATP-dependent RNA helicase; n=3; Deltap... 148 1e-34
UniRef50_UPI0000566899 Cluster: UPI0000566899 related cluster; n... 148 2e-34
UniRef50_Q8EZ11 Cluster: ATP-dependent RNA helicase; n=4; Leptos... 148 2e-34
UniRef50_Q26CN9 Cluster: ATP-dependent RNA helicase; n=1; Flavob... 147 2e-34
UniRef50_Q5ZT20 Cluster: ATP-dependent RNA helicase; n=4; Legion... 147 3e-34
UniRef50_Q6F0U0 Cluster: ATP-dependent RNA helicase; n=1; Mesopl... 146 4e-34
UniRef50_A5BYF4 Cluster: Putative uncharacterized protein; n=1; ... 146 4e-34
UniRef50_Q7VFA9 Cluster: ATP-dependent RNA helicase DeaD; n=6; H... 146 5e-34
UniRef50_P0A9P8 Cluster: Cold-shock DEAD box protein A; n=54; Ga... 146 5e-34
UniRef50_P44586 Cluster: Cold-shock DEAD box protein A homolog; ... 146 5e-34
UniRef50_Q11QF9 Cluster: Inducible ATP-independent RNA helicase;... 146 7e-34
UniRef50_A7JLA3 Cluster: ATP-dependent RNA helicase; n=20; Franc... 146 7e-34
UniRef50_Q893G8 Cluster: ATP-dependent RNA helicase; n=4; Clostr... 145 9e-34
UniRef50_Q0RTL3 Cluster: Cold-shock DeaD box ATP-dependent RNA h... 145 9e-34
UniRef50_Q0AVQ9 Cluster: ATP-dependent RNA helicase; n=1; Syntro... 145 1e-33
UniRef50_A5CVQ6 Cluster: ATP-dependent RNA helicase DeaD; n=2; s... 144 2e-33
UniRef50_A4BET4 Cluster: DEAD/DEAH box helicase-like protein; n=... 144 2e-33
UniRef50_A6T3R2 Cluster: ATP-dependent RNA helicase; n=52; cellu... 144 2e-33
UniRef50_Q185X0 Cluster: ATP-dependent RNA helicase; n=3; Clostr... 144 3e-33
UniRef50_UPI00015B4D43 Cluster: PREDICTED: hypothetical protein;... 143 4e-33
UniRef50_Q9PGP6 Cluster: ATP-dependent RNA helicase; n=10; cellu... 143 4e-33
UniRef50_Q8A2K2 Cluster: ATP-dependent RNA helicase; n=10; cellu... 143 4e-33
UniRef50_A2U1Q9 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 143 4e-33
UniRef50_Q64VR8 Cluster: ATP-dependent RNA helicase DeaD; n=14; ... 143 5e-33
UniRef50_A6H0L1 Cluster: Probable ATP-dependent RNA helicase, DE... 143 5e-33
UniRef50_P25888 Cluster: Putative ATP-dependent RNA helicase rhl... 142 6e-33
UniRef50_Q8R4Z5 Cluster: DEAD-box corepressor DP103 beta; n=5; T... 142 8e-33
UniRef50_A3ZWP8 Cluster: ATP-dependent RNA helicase; n=1; Blasto... 142 8e-33
UniRef50_A3WD13 Cluster: DNA and RNA helicase; n=2; Alphaproteob... 142 8e-33
UniRef50_Q978T9 Cluster: ATP-dependent RNA helicase; n=3; Thermo... 142 8e-33
UniRef50_Q2FKY7 Cluster: DEAD/DEAH box helicase-like; n=1; Metha... 142 8e-33
UniRef50_Q9UHI6 Cluster: Probable ATP-dependent RNA helicase DDX... 142 8e-33
UniRef50_Q4T821 Cluster: Chromosome undetermined SCAF7914, whole... 141 1e-32
UniRef50_A4M6V6 Cluster: DEAD/DEAH box helicase domain protein; ... 141 1e-32
UniRef50_P0C218 Cluster: Probable ATP-dependent RNA helicase DDX... 141 1e-32
UniRef50_A5FST0 Cluster: DEAD/DEAH box helicase domain protein; ... 141 2e-32
UniRef50_Q0W8H7 Cluster: ATP-dependent RNA helicase; n=1; uncult... 141 2e-32
UniRef50_A0V009 Cluster: DEAD/DEAH box helicase-like; n=1; Clost... 140 2e-32
UniRef50_Q3LWE1 Cluster: Translation initiation factor 4A2; n=1;... 140 2e-32
UniRef50_Q14NT1 Cluster: Putative atp-dependent rna helicase pro... 140 3e-32
UniRef50_Q08Q14 Cluster: HeliCase, c-terminal:dead/deah box heli... 140 3e-32
UniRef50_Q01PH0 Cluster: DEAD/DEAH box helicase domain protein; ... 140 3e-32
UniRef50_A7BCL2 Cluster: Putative uncharacterized protein; n=1; ... 140 3e-32
UniRef50_UPI0000D55AB0 Cluster: PREDICTED: similar to Probable A... 140 4e-32
UniRef50_Q5GZA1 Cluster: ATP-dependent RNA helicase; n=6; Xantho... 140 4e-32
UniRef50_Q1IMK6 Cluster: DEAD/DEAH box helicase-like; n=1; Acido... 140 4e-32
UniRef50_Q5QY63 Cluster: ATP-dependent RNA helicase; n=3; Altero... 139 6e-32
UniRef50_Q4IZ16 Cluster: DEAD/DEAH box helicase:Helicase, C-term... 139 6e-32
UniRef50_Q58083 Cluster: Probable ATP-dependent RNA helicase MJ0... 139 6e-32
UniRef50_Q4N4B1 Cluster: ATP-dependent RNA helicase, putative; n... 139 8e-32
UniRef50_Q5KBP5 Cluster: ATP-dependent RNA helicase DBP5; n=3; F... 139 8e-32
UniRef50_Q81JK1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 138 1e-31
UniRef50_Q9LKL6 Cluster: DEAD box protein P68; n=5; Viridiplanta... 138 1e-31
UniRef50_Q5NML9 Cluster: DNA and RNA helicase; n=28; Alphaproteo... 138 1e-31
UniRef50_Q31AC4 Cluster: DEAD/DEAH box helicase-like protein; n=... 138 1e-31
UniRef50_Q11039 Cluster: Cold-shock DEAD box protein A homolog; ... 138 1e-31
UniRef50_P20449 Cluster: ATP-dependent RNA helicase DBP5; n=23; ... 138 1e-31
UniRef50_Q39MK8 Cluster: DEAD/DEAH box helicase; n=10; Proteobac... 138 2e-31
UniRef50_A6DL95 Cluster: Probable ATP-dependent RNA helicase; n=... 138 2e-31
UniRef50_O26305 Cluster: ATP-dependent RNA helicase, eIF-4A fami... 138 2e-31
UniRef50_UPI0000499A01 Cluster: DEAD/DEAH box helicase; n=1; Ent... 137 2e-31
UniRef50_A5UZK3 Cluster: DEAD/DEAH box helicase domain protein; ... 137 2e-31
UniRef50_A4B5L7 Cluster: ATP-dependent RNA helicase DbpA; n=3; P... 137 2e-31
UniRef50_A0VLH7 Cluster: DEAD/DEAH box helicase domain protein; ... 137 3e-31
UniRef50_A0M3C7 Cluster: RhlE-like DEAD box family ATP-dependent... 136 4e-31
UniRef50_P42305 Cluster: ATP-dependent RNA helicase dbpA; n=9; F... 136 5e-31
UniRef50_Q2LY23 Cluster: Superfamily II DNA and RNA helicases; n... 136 7e-31
UniRef50_A6TTG0 Cluster: DEAD/DEAH box helicase domain protein; ... 136 7e-31
UniRef50_A6DK15 Cluster: ATP-dependent RNA helicase, specific fo... 136 7e-31
UniRef50_A4J5M3 Cluster: DEAD/DEAH box helicase domain protein; ... 136 7e-31
UniRef50_Q56XG6 Cluster: DEAD-box ATP-dependent RNA helicase 15;... 136 7e-31
UniRef50_Q6A841 Cluster: Putative ATP-dependent RNA helicase; n=... 135 9e-31
UniRef50_Q0FAJ4 Cluster: Dead-box ATP-dependent RNA helicase; n=... 135 1e-30
UniRef50_A5G1U8 Cluster: DEAD/DEAH box helicase domain protein; ... 135 1e-30
UniRef50_A0KTC9 Cluster: DEAD/DEAH box helicase domain protein; ... 135 1e-30
UniRef50_A4RIF1 Cluster: ATP-dependent RNA helicase DBP5; n=7; A... 135 1e-30
UniRef50_Q82T78 Cluster: RhlE; ATP-dependent RNA helicase RhlE; ... 134 2e-30
UniRef50_Q6MR64 Cluster: ATP-dependent RNA helicase; n=5; cellul... 134 2e-30
UniRef50_Q15T34 Cluster: DEAD/DEAH box helicase-like; n=1; Pseud... 134 2e-30
UniRef50_A6G4U7 Cluster: DEAD/DEAH box helicase; n=2; Plesiocyst... 134 2e-30
UniRef50_A6DIU5 Cluster: Probable ATP dependent RNA helicase; n=... 134 2e-30
UniRef50_Q0TQ86 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 134 2e-30
UniRef50_A1U3D6 Cluster: DEAD/DEAH box helicase domain protein; ... 134 2e-30
UniRef50_Q8D7D0 Cluster: Superfamily II DNA and RNA helicase; n=... 134 3e-30
UniRef50_Q89UH0 Cluster: Dead-box ATP-dependent RNA helicase; n=... 134 3e-30
UniRef50_Q6MN50 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 134 3e-30
UniRef50_Q0HKH0 Cluster: DEAD/DEAH box helicase domain protein; ... 134 3e-30
UniRef50_A0RUV7 Cluster: Superfamily II helicase; n=3; Thermopro... 134 3e-30
UniRef50_Q62IF8 Cluster: ATP-dependent RNA helicase RhlE; n=59; ... 133 4e-30
UniRef50_Q0HYG8 Cluster: DEAD/DEAH box helicase domain protein; ... 133 4e-30
UniRef50_UPI000065E01D Cluster: Homolog of Brachydanio rerio "Eu... 133 5e-30
UniRef50_Q087U7 Cluster: DEAD/DEAH box helicase domain protein; ... 133 5e-30
UniRef50_Q54TF8 Cluster: DEAD-box RNA helicase; n=2; Dictyosteli... 133 5e-30
UniRef50_Q7A4G0 Cluster: Probable DEAD-box ATP-dependent RNA hel... 133 5e-30
UniRef50_P38712 Cluster: ATP-dependent rRNA helicase RRP3; n=6; ... 133 5e-30
UniRef50_A6VTY7 Cluster: DEAD/DEAH box helicase domain protein; ... 132 7e-30
UniRef50_Q9P9G7 Cluster: DEAD-box RNA helicase; n=3; Methanosarc... 132 7e-30
UniRef50_Q81QF0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 132 1e-29
UniRef50_Q6D2K3 Cluster: ATP-independent RNA helicase; n=6; Prot... 132 1e-29
UniRef50_Q4FSS4 Cluster: Possible ATP-dependent DEAD/DEAH box RN... 132 1e-29
UniRef50_Q13838 Cluster: Spliceosome RNA helicase BAT1; n=55; Eu... 132 1e-29
UniRef50_Q96GQ7 Cluster: Probable ATP-dependent RNA helicase DDX... 132 1e-29
UniRef50_Q6MBR0 Cluster: Putative ATP-dependent RNA helicase; n=... 131 2e-29
UniRef50_Q28T45 Cluster: DEAD/DEAH box helicase-like protein; n=... 131 2e-29
UniRef50_Q11TW3 Cluster: Possible ATP-dependent RNA helicase; n=... 131 2e-29
UniRef50_Q54TJ4 Cluster: Putative uncharacterized protein; n=1; ... 131 2e-29
UniRef50_Q27268 Cluster: ATP-dependent RNA helicase WM6; n=82; E... 131 2e-29
UniRef50_O00148 Cluster: ATP-dependent RNA helicase DDX39; n=27;... 131 2e-29
UniRef50_UPI0001509D93 Cluster: DEAD/DEAH box helicase family pr... 131 2e-29
UniRef50_Q0LVA0 Cluster: Helicase-like:DEAD/DEAH box helicase-li... 131 2e-29
UniRef50_Q0C4R1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 131 2e-29
UniRef50_A6Q8Y9 Cluster: ATP-dependent RNA helicase, DEAD-box fa... 131 2e-29
UniRef50_A0RP33 Cluster: Putative ATP-dependent RNA helicase Rhl... 131 2e-29
UniRef50_UPI00015BD198 Cluster: UPI00015BD198 related cluster; n... 130 3e-29
UniRef50_Q7MT81 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 130 3e-29
UniRef50_Q3AZR1 Cluster: DEAD/DEAH box helicase-like; n=2; Synec... 130 3e-29
UniRef50_Q1VL45 Cluster: DEAD/DEAH box helicase-like protein; n=... 130 3e-29
UniRef50_Q4Q2Z6 Cluster: ATP-dependent RNA helicase, putative; n... 130 3e-29
UniRef50_Q9LUW5 Cluster: DEAD-box ATP-dependent RNA helicase 53;... 130 3e-29
UniRef50_Q3EBD3 Cluster: DEAD-box ATP-dependent RNA helicase 41;... 130 3e-29
UniRef50_Q17BP5 Cluster: DEAD box ATP-dependent RNA helicase; n=... 130 4e-29
UniRef50_UPI0000DB7226 Cluster: PREDICTED: similar to Probable A... 130 5e-29
UniRef50_Q2BP56 Cluster: Putative ATP-dependent RNA helicase; n=... 130 5e-29
UniRef50_P0C2N8 Cluster: ATP-dependent RNA helicase drs-1; n=16;... 130 5e-29
UniRef50_Q2BMZ1 Cluster: ATP-dependent RNA helicase; n=1; Neptun... 129 6e-29
UniRef50_A1G315 Cluster: DEAD/DEAH box helicase-like; n=2; Salin... 129 6e-29
UniRef50_Q44NG9 Cluster: Helicase, C-terminal:DEAD/DEAH box heli... 128 1e-28
UniRef50_Q019E9 Cluster: ATP-dependent RNA helicase; n=2; Ostreo... 128 1e-28
UniRef50_Q0G0P8 Cluster: Superfamily II DNA and RNA helicase; n=... 128 1e-28
UniRef50_Q8MZI3 Cluster: GH10652p; n=2; Drosophila melanogaster|... 128 1e-28
UniRef50_Q17JB5 Cluster: DEAD box ATP-dependent RNA helicase; n=... 128 1e-28
UniRef50_Q5FS73 Cluster: ATP-dependent RNA helicase; n=2; Glucon... 128 2e-28
UniRef50_Q480Z7 Cluster: ATP-dependent RNA helicase, DEAD box fa... 128 2e-28
UniRef50_UPI00015B5D7B Cluster: PREDICTED: similar to LD28101p; ... 127 2e-28
UniRef50_Q6YPL1 Cluster: Superfamily II DNA and RNA helicase; n=... 127 2e-28
UniRef50_Q5FUQ9 Cluster: ATP-dependent RNA helicase; n=11; cellu... 127 2e-28
UniRef50_O66866 Cluster: ATP-dependent RNA helicase DeaD; n=1; A... 127 2e-28
UniRef50_Q11U28 Cluster: ATP-dependent RNA helicase protein; n=4... 127 2e-28
UniRef50_O07897 Cluster: Heat resistant RNA dependent ATPase; n=... 127 2e-28
UniRef50_Q89IS2 Cluster: Cold-shock dead-box protein A; n=28; Al... 126 4e-28
UniRef50_Q41FS1 Cluster: IMP dehydrogenase/GMP reductase:Helicas... 126 4e-28
UniRef50_A6QC93 Cluster: ATP-independent RNA helicase DbpA; n=1;... 126 4e-28
UniRef50_UPI0000DAE40A Cluster: hypothetical protein Rgryl_01000... 126 6e-28
UniRef50_UPI00006CDDA3 Cluster: CLN3 protein; n=1; Tetrahymena t... 126 6e-28
UniRef50_Q4V836 Cluster: MGC114699 protein; n=9; Deuterostomia|R... 126 6e-28
UniRef50_O34750 Cluster: YfmL protein; n=5; Bacillus|Rep: YfmL p... 126 6e-28
UniRef50_Q2YZZ9 Cluster: Putative uncharacterized protein; n=1; ... 126 6e-28
UniRef50_UPI0000585111 Cluster: PREDICTED: hypothetical protein;... 126 8e-28
UniRef50_Q5NN72 Cluster: DNA and RNA helicase; n=3; Sphingomonad... 126 8e-28
UniRef50_A0KZD5 Cluster: DEAD/DEAH box helicase domain protein; ... 126 8e-28
UniRef50_P54475 Cluster: Probable ATP-dependent RNA helicase yqf... 126 8e-28
UniRef50_P32892 Cluster: ATP-dependent RNA helicase DRS1; n=13; ... 126 8e-28
UniRef50_P0C2N7 Cluster: ATP-dependent RNA helicase DRS1; n=2; C... 126 8e-28
UniRef50_A6CFZ8 Cluster: ATP-dependent RNA helicase; n=1; Planct... 125 1e-27
UniRef50_Q1FMF9 Cluster: Helicase-like:DbpA, RNA-binding:DEAD/DE... 125 1e-27
UniRef50_A4V6K5 Cluster: DEAD box polypeptide 19 protein; n=3; P... 125 1e-27
UniRef50_A5E6W6 Cluster: ATP-dependent rRNA helicase RRP3; n=4; ... 125 1e-27
UniRef50_Q9VHP0 Cluster: ATP-dependent RNA helicase bel; n=4; Pr... 125 1e-27
UniRef50_Q5QWG1 Cluster: ATP-dependent RNA helicase; n=1; Idioma... 124 2e-27
UniRef50_Q30SZ2 Cluster: DEAD/DEAH box helicase-like; n=1; Thiom... 124 2e-27
UniRef50_A0KXT6 Cluster: DEAD/DEAH box helicase domain protein; ... 124 2e-27
UniRef50_Q49K88 Cluster: DEAD box RNA helicase; n=1; Toxoplasma ... 124 2e-27
UniRef50_A5E058 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 124 2e-27
UniRef50_Q2S6I0 Cluster: ATP-dependent RNA helicase; n=1; Salini... 124 2e-27
UniRef50_Q188H5 Cluster: Putative ATP-dependent RNA helicase; n=... 124 2e-27
UniRef50_A7HG33 Cluster: DEAD/DEAH box helicase domain protein; ... 124 2e-27
UniRef50_A3I1F5 Cluster: DEAD/DEAH box helicase-like protein; n=... 124 2e-27
UniRef50_A0UX17 Cluster: DEAD/DEAH box helicase-like; n=5; Clost... 124 2e-27
UniRef50_A0BPV0 Cluster: Chromosome undetermined scaffold_12, wh... 124 2e-27
UniRef50_Q5BF42 Cluster: Putative uncharacterized protein; n=1; ... 124 2e-27
UniRef50_Q09903 Cluster: ATP-dependent RNA helicase drs1; n=1; S... 124 2e-27
UniRef50_A3ZXX1 Cluster: ATP-dependent RNA helicase; n=2; Planct... 124 3e-27
UniRef50_Q8SY39 Cluster: LD28101p; n=3; Diptera|Rep: LD28101p - ... 124 3e-27
UniRef50_Q9ZRZ8 Cluster: DEAD-box ATP-dependent RNA helicase 28;... 124 3e-27
UniRef50_Q09719 Cluster: ATP-dependent RNA helicase dbp10; n=2; ... 124 3e-27
UniRef50_Q8YH70 Cluster: ATP-DEPENDENT RNA HELICASE RHLE; n=10; ... 123 4e-27
UniRef50_Q2WF63 Cluster: Putative uncharacterized protein; n=4; ... 123 4e-27
UniRef50_Q9LYJ9 Cluster: DEAD-box ATP-dependent RNA helicase 46;... 123 4e-27
UniRef50_P21693 Cluster: ATP-independent RNA helicase dbpA; n=19... 123 4e-27
UniRef50_UPI00003C8469 Cluster: hypothetical protein Faci_030017... 123 5e-27
UniRef50_A4C0F9 Cluster: ATP-dependent RNA helicase; n=6; Bacter... 123 5e-27
UniRef50_A4RYJ1 Cluster: Predicted protein; n=3; Ostreococcus|Re... 123 5e-27
UniRef50_Q23U16 Cluster: DEAD/DEAH box helicase family protein; ... 123 5e-27
UniRef50_Q88NB7 Cluster: ATP-dependent RNA helicase rhlB; n=18; ... 123 5e-27
UniRef50_Q9HXE5 Cluster: ATP-dependent RNA helicase rhlB; n=22; ... 123 5e-27
UniRef50_O49289 Cluster: Putative DEAD-box ATP-dependent RNA hel... 123 5e-27
UniRef50_O22907 Cluster: DEAD-box ATP-dependent RNA helicase 24;... 123 5e-27
UniRef50_Q9UHL0 Cluster: ATP-dependent RNA helicase DDX25; n=111... 123 5e-27
UniRef50_Q6MQY6 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 122 7e-27
UniRef50_Q1Q4V2 Cluster: Similar to ATP-independent RNA helicase... 122 7e-27
UniRef50_Q1I3W1 Cluster: ATP-dependent RNA helicase RhlE, DEAD b... 122 7e-27
UniRef50_Q12QV2 Cluster: DEAD/DEAH box helicase-like protein; n=... 122 7e-27
UniRef50_A5FH33 Cluster: DEAD/DEAH box helicase domain protein; ... 122 7e-27
UniRef50_Q54Y81 Cluster: Putative RNA helicase; n=2; Dictyosteli... 122 7e-27
UniRef50_Q92GV2 Cluster: ATP-dependent RNA helicase RhlE; n=10; ... 122 9e-27
UniRef50_Q5GRS8 Cluster: Superfamily II DNA/RNA helicase; n=4; W... 122 9e-27
UniRef50_Q0BSI7 Cluster: ATP-dependent RNA helicase; n=12; Alpha... 122 9e-27
UniRef50_Q8GY84 Cluster: DEAD-box ATP-dependent RNA helicase 10;... 122 9e-27
UniRef50_Q5T1V6 Cluster: Probable ATP-dependent RNA helicase DDX... 122 9e-27
UniRef50_UPI0000DB7667 Cluster: PREDICTED: similar to CG32344-PA... 122 1e-26
UniRef50_Q9RKJ0 Cluster: ATP-dependent RNA helicase; n=2; Strept... 122 1e-26
UniRef50_Q12B10 Cluster: DEAD/DEAH box helicase-like; n=13; Prot... 122 1e-26
UniRef50_Q11WD3 Cluster: Possible ATP-dependent RNA helicase; n=... 122 1e-26
UniRef50_Q0AR94 Cluster: DEAD/DEAH box helicase domain protein; ... 122 1e-26
UniRef50_A6QHA1 Cluster: ATP-dependent RNA helicase DEAD/DEAH bo... 122 1e-26
UniRef50_A5BNE7 Cluster: Putative uncharacterized protein; n=1; ... 122 1e-26
UniRef50_Q9N5K1 Cluster: Putative uncharacterized protein; n=2; ... 122 1e-26
UniRef50_Q7QTB2 Cluster: GLP_15_13424_14974; n=2; Giardia intest... 122 1e-26
UniRef50_Q4N9Q9 Cluster: DEAD box RNA helicase, putative; n=3; P... 122 1e-26
UniRef50_Q8L7S8 Cluster: DEAD-box ATP-dependent RNA helicase 3; ... 122 1e-26
UniRef50_Q8SQK9 Cluster: ATP-dependent RNA helicase DHH1; n=1; E... 122 1e-26
UniRef50_Q8D6Y8 Cluster: Superfamily II DNA and RNA helicase; n=... 121 2e-26
UniRef50_Q87HW1 Cluster: ATP-dependent RNA helicase, DEAD box fa... 121 2e-26
UniRef50_Q688Z4 Cluster: Putative uncharacterized protein; n=3; ... 121 2e-26
UniRef50_UPI0000E48294 Cluster: PREDICTED: similar to DEAD (Asp-... 121 2e-26
UniRef50_Q4SJI2 Cluster: Chromosome 4 SCAF14575, whole genome sh... 121 2e-26
UniRef50_A6NSW7 Cluster: Putative uncharacterized protein; n=1; ... 121 2e-26
UniRef50_A1KUM8 Cluster: Putative ATP-dependent RNA helicase; n=... 121 2e-26
UniRef50_Q16XX4 Cluster: DEAD box ATP-dependent RNA helicase; n=... 121 2e-26
UniRef50_Q4P3U9 Cluster: ATP-dependent rRNA helicase RRP3; n=20;... 121 2e-26
UniRef50_A3BT52 Cluster: DEAD-box ATP-dependent RNA helicase 29;... 121 2e-26
UniRef50_Q5KIK3 Cluster: ATP-dependent RNA helicase DRS1; n=1; F... 121 2e-26
UniRef50_Q9H0S4 Cluster: Probable ATP-dependent RNA helicase DDX... 121 2e-26
UniRef50_Q18W60 Cluster: DEAD/DEAH box helicase-like; n=2; Desul... 120 3e-26
UniRef50_Q11UI8 Cluster: DEAD box-related helicase; n=3; Sphingo... 120 3e-26
UniRef50_A7U5W7 Cluster: DEAD-box helicase 2; n=6; Plasmodium|Re... 120 3e-26
UniRef50_P75172 Cluster: Probable ATP-dependent RNA helicase MG4... 120 3e-26
UniRef50_Q81LV0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 120 4e-26
UniRef50_Q0BUS0 Cluster: ATP-dependent RNA helicase; n=3; Rhodos... 120 4e-26
UniRef50_A3PFY9 Cluster: DEAD/DEAH box helicase domain protein; ... 120 4e-26
UniRef50_A3EUK2 Cluster: Superfamily II DNA and RNA helicase; n=... 120 4e-26
UniRef50_Q8TDD1 Cluster: ATP-dependent RNA helicase DDX54; n=45;... 120 4e-26
UniRef50_Q8EPZ1 Cluster: ATP-dependent RNA helicase; n=2; Bacill... 120 5e-26
UniRef50_Q1N6E2 Cluster: ATP-dependent RNA helicase; n=1; Oceano... 120 5e-26
UniRef50_A4LYS0 Cluster: DEAD/DEAH box helicase domain protein; ... 120 5e-26
UniRef50_A7APE7 Cluster: DEAD/DEAH box helicase domain containin... 120 5e-26
UniRef50_Q9SQV1 Cluster: Probable DEAD-box ATP-dependent RNA hel... 120 5e-26
UniRef50_A4RW46 Cluster: Predicted protein; n=2; Ostreococcus|Re... 119 7e-26
UniRef50_Q2LZJ8 Cluster: GA19670-PA; n=1; Drosophila pseudoobscu... 119 7e-26
UniRef50_Q238V7 Cluster: Type III restriction enzyme, res subuni... 119 7e-26
UniRef50_Q22MC1 Cluster: Type III restriction enzyme, res subuni... 119 7e-26
UniRef50_A3WBM2 Cluster: Cold-shock dead-box protein A; n=1; Ery... 119 9e-26
UniRef50_A0JYP4 Cluster: DEAD/DEAH box helicase domain protein; ... 119 9e-26
UniRef50_Q7QQ49 Cluster: GLP_139_12217_14094; n=1; Giardia lambl... 119 9e-26
UniRef50_Q2H0R2 Cluster: ATP-dependent RNA helicase DBP10; n=1; ... 119 9e-26
UniRef50_Q30P62 Cluster: DEAD/DEAH box helicase-like; n=1; Thiom... 118 1e-25
UniRef50_A6DHU9 Cluster: DEAD/DEAH box helicase-like protein; n=... 118 1e-25
UniRef50_Q4QC38 Cluster: RNA helicase, putative; n=7; Trypanosom... 118 1e-25
UniRef50_Q6BML1 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 118 1e-25
UniRef50_Q7VQL9 Cluster: Cold-shock DEAD-box protein A, inducibl... 118 2e-25
UniRef50_A6VWX2 Cluster: DEAD/DEAH box helicase domain protein; ... 118 2e-25
UniRef50_A6GPV2 Cluster: Helicase; n=1; Limnobacter sp. MED105|R... 118 2e-25
UniRef50_Q5CIF9 Cluster: DEAD-box RNA helicase; n=2; Cryptospori... 118 2e-25
UniRef50_A0BDD2 Cluster: Chromosome undetermined scaffold_100, w... 118 2e-25
UniRef50_Q8L4E9 Cluster: DEAD-box ATP-dependent RNA helicase 36;... 118 2e-25
UniRef50_Q5KPU1 Cluster: ATP-dependent RNA helicase DBP8; n=2; F... 118 2e-25
UniRef50_Q4IF76 Cluster: ATP-dependent RNA helicase DBP2; n=4; F... 118 2e-25
UniRef50_Q835K0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 118 2e-25
UniRef50_A6W6A7 Cluster: DEAD/DEAH box helicase domain protein; ... 118 2e-25
UniRef50_O97032 Cluster: DjVLGB; n=2; Dugesia|Rep: DjVLGB - Duge... 118 2e-25
UniRef50_Q3SF48 Cluster: DEAD/DEAH box helicase; n=6; cellular o... 117 3e-25
UniRef50_A7CUH7 Cluster: DEAD/DEAH box helicase domain protein; ... 117 3e-25
UniRef50_Q9V3C4 Cluster: CG6539-PA; n=1; Drosophila melanogaster... 117 3e-25
UniRef50_A2DB16 Cluster: DEAD/DEAH box helicase family protein; ... 117 3e-25
UniRef50_P20448 Cluster: ATP-dependent RNA helicase DBP4; n=13; ... 117 3e-25
UniRef50_Q89M45 Cluster: ATP-dependent RNA helicase; n=29; cellu... 116 5e-25
UniRef50_Q31EF0 Cluster: ATP-dependent RNA helicase; n=1; Thiomi... 116 5e-25
UniRef50_Q4PNH7 Cluster: Putative cold-shock dead-box protein A;... 116 5e-25
UniRef50_A2U4F0 Cluster: Putative ATP-dependent RNA helicase; n=... 116 5e-25
UniRef50_Q5CHB7 Cluster: Putative uncharacterized protein; n=2; ... 116 5e-25
UniRef50_Q4MYL1 Cluster: ATP-dependent RNA helicase, putative; n... 116 5e-25
UniRef50_Q4P9P3 Cluster: ATP-dependent RNA helicase DRS1; n=1; U... 116 5e-25
UniRef50_Q8F0Q7 Cluster: ATP-dependent RNA helicase; n=4; Leptos... 116 6e-25
UniRef50_Q30YG9 Cluster: DEAD/DEAH box helicase-like; n=3; Delta... 116 6e-25
UniRef50_A1UCR5 Cluster: DEAD/DEAH box helicase domain protein; ... 116 6e-25
UniRef50_Q2PZC2 Cluster: Vasa protein; n=3; Apidae|Rep: Vasa pro... 116 6e-25
UniRef50_A2DES1 Cluster: DEAD/DEAH box helicase family protein; ... 116 6e-25
UniRef50_P93008 Cluster: DEAD-box ATP-dependent RNA helicase 21;... 116 6e-25
UniRef50_Q8SRB2 Cluster: ATP-dependent RNA helicase DBP2; n=103;... 116 6e-25
UniRef50_Q0UMB6 Cluster: ATP-dependent RNA helicase DBP10; n=1; ... 116 6e-25
UniRef50_Q5BFU7 Cluster: ATP-dependent RNA helicase dbp10; n=14;... 116 6e-25
UniRef50_Q1GJ43 Cluster: DEAD/DEAH box helicase-like protein; n=... 116 8e-25
UniRef50_A7CSF3 Cluster: DEAD/DEAH box helicase domain protein; ... 116 8e-25
UniRef50_UPI00015B61D8 Cluster: PREDICTED: similar to vasa-like ... 115 1e-24
UniRef50_UPI0000498D8E Cluster: ATP-dependent RNA helicase; n=1;... 115 1e-24
UniRef50_Q81RE0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 115 1e-24
UniRef50_Q1AG34 Cluster: Ded1-like DEAD-box RNA helicase; n=1; C... 115 1e-24
UniRef50_A3QMD4 Cluster: Putative uncharacterized protein mel-46... 115 1e-24
UniRef50_Q9M2F9 Cluster: DEAD-box ATP-dependent RNA helicase 52;... 115 1e-24
UniRef50_Q0M1B5 Cluster: Helicase-like:DEAD/DEAH box helicase-li... 115 1e-24
UniRef50_A4EAF2 Cluster: Putative uncharacterized protein; n=1; ... 115 1e-24
UniRef50_A4BHZ9 Cluster: ATP-dependent RNA helicase; n=1; Reinek... 115 1e-24
UniRef50_A1USG3 Cluster: DEAD/DEAH box helicase domain/helicase ... 115 1e-24
UniRef50_Q9GV13 Cluster: Vasa-related protein CnVAS1; n=3; Eumet... 115 1e-24
UniRef50_A6QYH1 Cluster: 2-isopropylmalate synthase; n=4; Ascomy... 115 1e-24
UniRef50_Q6KI10 Cluster: DEAD-box ATP-dependent RNA helicase; n=... 114 2e-24
UniRef50_Q6A6U7 Cluster: ATP-dependent RNA helicase; n=3; Actino... 114 2e-24
UniRef50_Q5FNK0 Cluster: ATP-dependent RNA helicase; n=1; Glucon... 114 2e-24
UniRef50_A6VX62 Cluster: DEAD/DEAH box helicase domain protein; ... 114 2e-24
UniRef50_Q54CD8 Cluster: Putative RNA helicase; n=2; Dictyosteli... 114 2e-24
UniRef50_A7U5W6 Cluster: DEAD-box helicase 1; n=8; Aconoidasida|... 114 2e-24
UniRef50_A7RGX3 Cluster: Predicted protein; n=3; Eukaryota|Rep: ... 114 2e-24
UniRef50_A5K9H3 Cluster: Pre-mRNA splicing factor RNA helicase P... 114 2e-24
UniRef50_A0EIJ0 Cluster: Chromosome undetermined scaffold_99, wh... 114 2e-24
UniRef50_Q8SSD2 Cluster: ATP-DEPENDENT RNA HELICASE INVOLVED IN ... 114 2e-24
UniRef50_Q5N7W4 Cluster: DEAD-box ATP-dependent RNA helicase 30;... 114 2e-24
UniRef50_Q5KME7 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 114 2e-24
UniRef50_A1VA48 Cluster: DEAD/DEAH box helicase domain protein; ... 114 2e-24
UniRef50_Q55BR9 Cluster: Putative uncharacterized protein; n=1; ... 114 2e-24
UniRef50_Q4JG17 Cluster: Vasa-like protein; n=1; Litopenaeus van... 114 2e-24
UniRef50_Q388E8 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 114 2e-24
UniRef50_Q16JA8 Cluster: DEAD box ATP-dependent RNA helicase; n=... 114 2e-24
UniRef50_Q9Y7T7 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 114 2e-24
UniRef50_Q03532 Cluster: ATP-dependent RNA helicase HAS1; n=70; ... 114 2e-24
UniRef50_Q4S6B9 Cluster: Chromosome 9 SCAF14729, whole genome sh... 113 3e-24
UniRef50_A4B385 Cluster: ATP-dependent RNA helicase, DEAD box fa... 113 3e-24
UniRef50_Q8I0W7 Cluster: Snrnp protein, putative; n=6; Plasmodiu... 113 3e-24
UniRef50_Q7QQX6 Cluster: GLP_383_7421_6129; n=1; Giardia lamblia... 113 3e-24
UniRef50_Q4IP34 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 113 3e-24
UniRef50_A4R5B8 Cluster: ATP-dependent RNA helicase DBP10; n=2; ... 113 3e-24
UniRef50_Q9V3C0 Cluster: ATP-dependent RNA helicase abstrakt; n=... 113 3e-24
UniRef50_Q32LU9 Cluster: LOC562123 protein; n=3; Danio rerio|Rep... 113 4e-24
UniRef50_A6PQ62 Cluster: DEAD/DEAH box helicase domain protein; ... 113 4e-24
UniRef50_A4C6L9 Cluster: ATP-dependent RNA helicase, DEAD box fa... 113 4e-24
UniRef50_Q17II7 Cluster: DEAD box ATP-dependent RNA helicase; n=... 113 4e-24
UniRef50_Q16T16 Cluster: DEAD box ATP-dependent RNA helicase; n=... 113 4e-24
UniRef50_Q6KZC2 Cluster: ATP-dependent RNA helicase; n=1; Picrop... 113 4e-24
UniRef50_A2EVI2 Cluster: DEAD/DEAH box helicase family protein; ... 113 6e-24
UniRef50_A2ED04 Cluster: DEAD/DEAH box helicase family protein; ... 113 6e-24
UniRef50_A2DSJ0 Cluster: DEAD/DEAH box helicase family protein; ... 113 6e-24
UniRef50_A2DH37 Cluster: DEAD/DEAH box helicase family protein; ... 113 6e-24
UniRef50_Q6C7X8 Cluster: ATP-dependent RNA helicase DBP10; n=3; ... 113 6e-24
UniRef50_Q9KKW0 Cluster: ATP-dependent RNA helicase, DEAD box fa... 112 8e-24
UniRef50_A3JG19 Cluster: ATP-dependent RNA helicase; n=1; Marino... 112 8e-24
UniRef50_A5KB15 Cluster: ATP-dependent RNA helicase, putative; n... 112 8e-24
UniRef50_Q53FI9 Cluster: Nucleolar protein GU2 variant; n=3; Eut... 112 8e-24
UniRef50_Q4P7Y2 Cluster: Putative uncharacterized protein; n=1; ... 112 8e-24
UniRef50_A7TJK8 Cluster: Putative uncharacterized protein; n=1; ... 112 8e-24
UniRef50_Q9BUQ8 Cluster: Probable ATP-dependent RNA helicase DDX... 112 8e-24
UniRef50_UPI00004988F8 Cluster: DEAD/DEAH box helicase; n=1; Ent... 112 1e-23
UniRef50_A5EYB1 Cluster: ATP-dependent rna helicase Rhl; n=2; Ga... 112 1e-23
UniRef50_Q9SEV5 Cluster: RNA helicase; n=1; Guillardia theta|Rep... 112 1e-23
UniRef50_Q014T4 Cluster: Chromosome 07 contig 1, DNA sequence; n... 112 1e-23
UniRef50_Q9C551 Cluster: DEAD-box ATP-dependent RNA helicase 5; ... 112 1e-23
UniRef50_UPI0000D5571E Cluster: PREDICTED: similar to CG5800-PA;... 111 1e-23
UniRef50_Q4Q1N9 Cluster: DEAD box RNA helicase, putative; n=5; T... 111 1e-23
UniRef50_A7RHS2 Cluster: Predicted protein; n=1; Nematostella ve... 111 1e-23
UniRef50_A2EQ41 Cluster: DEAD/DEAH box helicase family protein; ... 111 1e-23
UniRef50_A0C321 Cluster: Chromosome undetermined scaffold_146, w... 111 1e-23
UniRef50_A4RHM4 Cluster: Putative uncharacterized protein; n=1; ... 111 1e-23
UniRef50_Q8EJQ5 Cluster: ATP-dependent RNA helicase rhlB; n=62; ... 111 1e-23
UniRef50_A1FEC3 Cluster: DEAD/DEAH box helicase-like; n=21; Gamm... 111 2e-23
UniRef50_Q9VXW2 Cluster: CG6227-PA; n=11; Coelomata|Rep: CG6227-... 111 2e-23
UniRef50_Q965K2 Cluster: Putative uncharacterized protein; n=2; ... 111 2e-23
UniRef50_Q7K4L8 Cluster: LD33749p; n=1; Drosophila melanogaster|... 111 2e-23
UniRef50_Q4W7T7 Cluster: VASA RNA helicase; n=3; Daphniidae|Rep:... 111 2e-23
UniRef50_Q22T03 Cluster: DEAD/DEAH box helicase family protein; ... 111 2e-23
UniRef50_A2DP01 Cluster: DEAD/DEAH box helicase family protein; ... 111 2e-23
UniRef50_Q2J6D3 Cluster: DEAD/DEAH box helicase-like; n=2; Frank... 111 2e-23
UniRef50_Q95QN2 Cluster: Putative uncharacterized protein; n=2; ... 111 2e-23
UniRef50_Q4Z5Q6 Cluster: ATP-dependent RNA helicase, putative; n... 111 2e-23
UniRef50_Q4N215 Cluster: RNA helicase, putative; n=3; Aconoidasi... 111 2e-23
UniRef50_Q3ZDP1 Cluster: Vasa-like protein; n=7; Neoptera|Rep: V... 111 2e-23
UniRef50_Q16W98 Cluster: DEAD box ATP-dependent RNA helicase; n=... 111 2e-23
UniRef50_UPI00015B6038 Cluster: PREDICTED: similar to DEAD box A... 110 3e-23
UniRef50_Q5FLW7 Cluster: RNA helicase; n=9; Lactobacillus|Rep: R... 110 3e-23
UniRef50_Q8I416 Cluster: ATP-dependent RNA helicase, putative; n... 110 3e-23
UniRef50_Q6BFH3 Cluster: Nucleolar RNA helicase II, putative; n=... 110 3e-23
UniRef50_Q24I45 Cluster: DEAD/DEAH box helicase family protein; ... 110 3e-23
UniRef50_A4UCU0 Cluster: DEAD box polypeptide 47 isoform 1 varia... 110 3e-23
UniRef50_P21507 Cluster: ATP-dependent RNA helicase srmB; n=82; ... 110 3e-23
UniRef50_Q8SR63 Cluster: ATP-dependent rRNA helicase RRP3; n=1; ... 110 3e-23
UniRef50_Q93ZG7 Cluster: DEAD-box ATP-dependent RNA helicase 38;... 110 3e-23
UniRef50_Q0E3X4 Cluster: DEAD-box ATP-dependent RNA helicase 35A... 110 3e-23
UniRef50_Q9NR30 Cluster: Nucleolar RNA helicase 2; n=51; Euteleo... 110 3e-23
UniRef50_UPI00015B4D1B Cluster: PREDICTED: similar to DEAD box A... 110 4e-23
UniRef50_UPI0000499D6F Cluster: DEAD/DEAH box helicase; n=1; Ent... 110 4e-23
UniRef50_UPI00004994C0 Cluster: DEAD/DEAH box helicase; n=2; Ent... 110 4e-23
UniRef50_O54116 Cluster: Probable DEAD-box RNA helicase; n=10; S... 110 4e-23
UniRef50_A6TX49 Cluster: DEAD/DEAH box helicase domain protein; ... 110 4e-23
UniRef50_A4AFV6 Cluster: ATP-dependent RNA helicase; n=3; Actino... 110 4e-23
UniRef50_Q17KA8 Cluster: DEAD box ATP-dependent RNA helicase; n=... 110 4e-23
UniRef50_A7SE71 Cluster: Predicted protein; n=1; Nematostella ve... 110 4e-23
UniRef50_Q0HLM7 Cluster: DEAD/DEAH box helicase domain protein; ... 109 5e-23
UniRef50_P19109 Cluster: ATP-dependent RNA helicase p62; n=9; Eu... 109 5e-23
UniRef50_P20447 Cluster: ATP-dependent RNA helicase DBP3; n=20; ... 109 5e-23
UniRef50_UPI0000E87E35 Cluster: putative ATP-dependent RNA helic... 109 7e-23
UniRef50_Q6MHS8 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 109 7e-23
UniRef50_Q1JSQ3 Cluster: Dead-box helicase, putative; n=1; Toxop... 109 7e-23
UniRef50_A2D7F9 Cluster: DEAD/DEAH box helicase family protein; ... 109 7e-23
UniRef50_Q97WT0 Cluster: ATP-dependent RNA helicase; n=4; Sulfol... 109 7e-23
UniRef50_Q4WRP2 Cluster: ATP-dependent RNA helicase mss116, mito... 109 7e-23
UniRef50_UPI00015609AE Cluster: PREDICTED: similar to DEAD (Asp-... 109 9e-23
UniRef50_UPI00004987FF Cluster: DEAD/DEAH box helicase; n=5; Ent... 109 9e-23
UniRef50_Q41F45 Cluster: Helicase, C-terminal:DEAD/DEAH box heli... 109 9e-23
UniRef50_Q1J0S9 Cluster: DEAD/DEAH box helicase-like protein; n=... 109 9e-23
UniRef50_A5BHG9 Cluster: Putative uncharacterized protein; n=1; ... 109 9e-23
UniRef50_A4S3A0 Cluster: Predicted protein; n=2; Ostreococcus|Re... 109 9e-23
UniRef50_Q9N478 Cluster: Putative uncharacterized protein; n=2; ... 109 9e-23
UniRef50_A7RY08 Cluster: Predicted protein; n=2; Eukaryota|Rep: ... 109 9e-23
UniRef50_A2DFG9 Cluster: DEAD/DEAH box helicase family protein; ... 109 9e-23
UniRef50_Q9KNA4 Cluster: ATP-dependent RNA helicase, DEAD box fa... 108 1e-22
UniRef50_Q03YT1 Cluster: Superfamily II DNA and RNA helicase; n=... 108 1e-22
UniRef50_Q55RL6 Cluster: Putative uncharacterized protein; n=2; ... 108 1e-22
UniRef50_Q5JKF2 Cluster: DEAD-box ATP-dependent RNA helicase 40;... 108 1e-22
UniRef50_A5DU73 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 108 1e-22
UniRef50_UPI0000499ECF Cluster: DEAD/DEAH box helicase; n=1; Ent... 108 2e-22
UniRef50_Q9K7L3 Cluster: RNA helicase; n=2; Bacillus|Rep: RNA he... 108 2e-22
UniRef50_Q869K2 Cluster: Similar to Dictyostelium discoideum (Sl... 108 2e-22
UniRef50_Q22308 Cluster: Putative uncharacterized protein; n=7; ... 108 2e-22
UniRef50_Q9LU46 Cluster: DEAD-box ATP-dependent RNA helicase 35;... 108 2e-22
UniRef50_Q4W7T8 Cluster: VASA RNA helicase; n=1; Artemia francis... 107 2e-22
UniRef50_Q6BLU9 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 107 2e-22
UniRef50_Q9P7C7 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 107 2e-22
UniRef50_Q8D563 Cluster: Superfamily II DNA and RNA helicase; n=... 107 3e-22
UniRef50_Q6NHC6 Cluster: Putative RNA helicase; n=2; Corynebacte... 107 3e-22
UniRef50_Q2Z064 Cluster: Probable ATP-dependent RNA helicase; n=... 107 3e-22
UniRef50_P09052 Cluster: ATP-dependent RNA helicase vasa; n=5; E... 107 3e-22
UniRef50_A4RK80 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 107 3e-22
UniRef50_Q0UZ59 Cluster: ATP-dependent RNA helicase DBP9; n=1; P... 107 3e-22
UniRef50_Q4RK69 Cluster: Chromosome 2 SCAF15032, whole genome sh... 107 4e-22
UniRef50_A6N5Z1 Cluster: Helicase; n=7; Plasmodium|Rep: Helicase... 107 4e-22
UniRef50_Q1E273 Cluster: Putative uncharacterized protein; n=2; ... 107 4e-22
UniRef50_A6RW79 Cluster: Putative uncharacterized protein; n=1; ... 107 4e-22
UniRef50_Q9GNP1 Cluster: Vasa homolog; n=18; Eumetazoa|Rep: Vasa... 106 5e-22
UniRef50_Q7QNT5 Cluster: GLP_88_2286_3572; n=1; Giardia lamblia ... 106 5e-22
UniRef50_Q7QA96 Cluster: ENSANGP00000013118; n=5; Eumetazoa|Rep:... 106 5e-22
UniRef50_Q5BYH3 Cluster: SJCHGC05414 protein; n=1; Schistosoma j... 106 5e-22
UniRef50_A7S2R2 Cluster: Predicted protein; n=5; Eumetazoa|Rep: ... 106 5e-22
UniRef50_A7ARY5 Cluster: DEAD/DEAH box helicase protein family; ... 106 5e-22
UniRef50_A0CZH3 Cluster: Chromosome undetermined scaffold_32, wh... 106 5e-22
UniRef50_A0C369 Cluster: Chromosome undetermined scaffold_146, w... 106 5e-22
UniRef50_Q5VQL1-2 Cluster: Isoform 2 of Q5VQL1 ; n=2; Magnolioph... 106 7e-22
UniRef50_Q6APU7 Cluster: Related to ATP-dependent RNA helicase; ... 106 7e-22
UniRef50_A4S6M9 Cluster: Predicted protein; n=3; Ostreococcus|Re... 106 7e-22
UniRef50_Q8H0U8 Cluster: DEAD-box ATP-dependent RNA helicase 42;... 106 7e-22
UniRef50_A0LLL9 Cluster: DEAD/DEAH box helicase domain protein; ... 105 9e-22
UniRef50_A4S107 Cluster: Predicted protein; n=1; Ostreococcus lu... 105 9e-22
UniRef50_Q4UA43 Cluster: DEAD-family helicase, putative; n=3; Pi... 105 9e-22
UniRef50_O17157 Cluster: Putative uncharacterized protein; n=3; ... 105 9e-22
UniRef50_A0EA02 Cluster: Chromosome undetermined scaffold_85, wh... 105 9e-22
UniRef50_Q8SR49 Cluster: ATP-dependent rRNA helicase SPB4; n=1; ... 105 9e-22
UniRef50_P21372 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 105 9e-22
UniRef50_Q5KNF8 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 105 9e-22
UniRef50_O00571 Cluster: ATP-dependent RNA helicase DDX3X; n=74;... 105 9e-22
UniRef50_Q4UBP8 Cluster: RNA helicase, putative; n=4; Eukaryota|... 105 1e-21
UniRef50_A2EAD4 Cluster: DEAD/DEAH box helicase family protein; ... 105 1e-21
UniRef50_Q9SF41 Cluster: DEAD-box ATP-dependent RNA helicase 45;... 105 1e-21
UniRef50_Q1MYS3 Cluster: Probable ATP-dependent RNA helicase; n=... 105 2e-21
UniRef50_Q2GSC7 Cluster: Putative uncharacterized protein; n=6; ... 105 2e-21
UniRef50_Q6CZD9 Cluster: ATP-dependent RNA helicase rhlB; n=2; G... 105 2e-21
UniRef50_Q6K7R9 Cluster: DEAD-box ATP-dependent RNA helicase 48;... 105 2e-21
UniRef50_UPI0000498D2C Cluster: DEAD/DEAH box helicase; n=3; Ent... 104 2e-21
UniRef50_Q2BIX8 Cluster: Probable ATP-dependent RNA helicase; n=... 104 2e-21
UniRef50_A3I404 Cluster: Putative uncharacterized protein; n=1; ... 104 2e-21
UniRef50_Q4UE18 Cluster: RNA helicase, putative; n=2; Theileria|... 104 2e-21
UniRef50_Q4QIQ9 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 104 2e-21
>UniRef50_Q14240 Cluster: Eukaryotic initiation factor 4A-II; n=37;
Bilateria|Rep: Eukaryotic initiation factor 4A-II - Homo
sapiens (Human)
Length = 407
Score = 321 bits (789), Expect = 1e-86
Identities = 151/223 (67%), Positives = 189/223 (84%), Gaps = 3/223 (1%)
Frame = +1
Query: 82 NGPSKDQG-SYDGPPGMDP-GTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQ 255
+G S D + GP GMDP G ++++W+++V+ FDDMNLKE LLRGIYAYGFEKPSAIQQ
Sbjct: 2 SGGSADYNREHGGPEGMDPDGVIESNWNEIVDNFDDMNLKESLLRGIYAYGFEKPSAIQQ 61
Query: 256 RAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVV 435
RAI+PCI+G DVIAQAQSGTGKTATF+ISILQQ++ +E QAL+LAPTRELAQQIQKV+
Sbjct: 62 RAIIPCIKGYDVIAQAQSGTGKTATFAISILQQLEIEFKETQALVLAPTRELAQQIQKVI 121
Query: 436 IALGDHLNAKCHACIGGTNVREDIRQLES-GVHVVVGTPGRVYDMITRRALHANTIKLFV 612
+ALGD++ A CHACIGGTNVR ++++L++ H+VVGTPGRV+DM+ RR L IK+FV
Sbjct: 122 LALGDYMGATCHACIGGTNVRNEMQKLQAEAPHIVVGTPGRVFDMLNRRYLSPKWIKMFV 181
Query: 613 LDEADEMLSRGFKDQIHDVFKMLSADVXVILLSATMPDDVLEV 741
LDEADEMLSRGFKDQI+++F+ L+ + V+LLSATMP DVLEV
Sbjct: 182 LDEADEMLSRGFKDQIYEIFQKLNTSIQVVLLSATMPTDVLEV 224
>UniRef50_P38919 Cluster: Eukaryotic initiation factor 4A-III;
n=366; root|Rep: Eukaryotic initiation factor 4A-III -
Homo sapiens (Human)
Length = 411
Score = 282 bits (691), Expect = 7e-75
Identities = 133/193 (68%), Positives = 162/193 (83%)
Frame = +1
Query: 163 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSIS 342
V TFD M L+E+LLRGIYAYGFEKPSAIQQRAI I+GRDVIAQ+QSGTGKTATFSIS
Sbjct: 36 VTPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSIS 95
Query: 343 ILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLES 522
+LQ +D +RE QALILAPTRELA QIQK ++ALGD++N +CHACIGGTNV EDIR+L+
Sbjct: 96 VLQCLDIQVRETQALILAPTRELAVQIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDY 155
Query: 523 GVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVXVI 702
G HVV GTPGRV+DMI RR+L IK+ VLDEADEML++GFK+QI+DV++ L V+
Sbjct: 156 GQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVV 215
Query: 703 LLSATMPDDVLEV 741
L+SAT+P ++LE+
Sbjct: 216 LISATLPHEILEM 228
>UniRef50_A2AAP7 Cluster: DEAD (Asp-Glu-Ala-Asp) box polypeptide 48;
n=5; Fungi/Metazoa group|Rep: DEAD (Asp-Glu-Ala-Asp) box
polypeptide 48 - Mus musculus (Mouse)
Length = 299
Score = 228 bits (557), Expect = 1e-58
Identities = 116/193 (60%), Positives = 144/193 (74%)
Frame = +1
Query: 163 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSIS 342
V TFD M L+E+LLRGIYAYGFEKPSAIQQRAI I+GRDVIAQ+QSGTGKTATFS+S
Sbjct: 36 VTPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSVS 95
Query: 343 ILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLES 522
+LQ +D Q L+ ALGD++N +CHACIGGTNV EDIR+L+
Sbjct: 96 VLQCLDI-----QGLL----------------ALGDYMNVQCHACIGGTNVGEDIRKLDY 134
Query: 523 GVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVXVI 702
G HVV GTPGRV+DMI RR+L IK+ VLDEADEML++GFK+QI+DV++ L V+
Sbjct: 135 GQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVV 194
Query: 703 LLSATMPDDVLEV 741
L+SAT+P ++LE+
Sbjct: 195 LISATLPHEILEM 207
>UniRef50_A0D232 Cluster: Chromosome undetermined scaffold_35, whole
genome shotgun sequence; n=5; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_35,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 434
Score = 226 bits (553), Expect = 4e-58
Identities = 101/200 (50%), Positives = 146/200 (73%)
Frame = +1
Query: 142 LDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 321
L +W + VETF+D+ L ++LLRGI++YGFE+PSAIQQ+AI P I G+DV+AQAQSGTGK
Sbjct: 47 LQENWIEQVETFEDLTLSKDLLRGIFSYGFERPSAIQQKAIKPIILGKDVLAQAQSGTGK 106
Query: 322 TATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVRE 501
T TF+I LQ+ID + R+ Q +ILAP RELA+QI VV +G +LN + CIGGT+ +E
Sbjct: 107 TGTFTIGALQRIDPNQRKTQVIILAPVRELAKQIYDVVKGIGQYLNIEAFCCIGGTSTQE 166
Query: 502 DIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKML 681
+ + GVH+++ TPGR+ DM+ + L A ++L V+DEAD+ML +GF D ++ KM+
Sbjct: 167 TREKCKQGVHIIIATPGRLIDMMKNKYLDATFMRLLVVDEADQMLDQGFSDNFAEILKMV 226
Query: 682 SADVXVILLSATMPDDVLEV 741
D+ + L SAT P +++E+
Sbjct: 227 PGDIQIALFSATFPQEIIEL 246
>UniRef50_P39517 Cluster: ATP-dependent RNA helicase DHH1; n=103;
Eukaryota|Rep: ATP-dependent RNA helicase DHH1 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 506
Score = 185 bits (451), Expect = 9e-46
Identities = 92/189 (48%), Positives = 121/189 (64%)
Frame = +1
Query: 172 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 351
TF+D LK ELL GI+ GFEKPS IQ+ AI I GRD++A+A++GTGKTA F I L+
Sbjct: 47 TFEDFYLKRELLMGIFEAGFEKPSPIQEEAIPVAITGRDILARAKNGTGKTAAFVIPTLE 106
Query: 352 QIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVH 531
++ + + QALI+ PTRELA Q +VV LG H C GGTN+R+DI +L VH
Sbjct: 107 KVKPKLNKIQALIMVPTRELALQTSQVVRTLGKHCGISCMVTTGGTNLRDDILRLNETVH 166
Query: 532 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVXVILLS 711
++VGTPGRV D+ +R+ + LF++DEAD+MLSR FK I + L +L S
Sbjct: 167 ILVGTPGRVLDLASRKVADLSDCSLFIMDEADKMLSRDFKTIIEQILSFLPPTHQSLLFS 226
Query: 712 ATMPDDVLE 738
AT P V E
Sbjct: 227 ATFPLTVKE 235
>UniRef50_Q4T4A9 Cluster: Chromosome undetermined SCAF9757, whole
genome shotgun sequence; n=2; Euteleostomi|Rep:
Chromosome undetermined SCAF9757, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 215
Score = 179 bits (435), Expect = 8e-44
Identities = 85/108 (78%), Positives = 97/108 (89%), Gaps = 1/108 (0%)
Frame = +1
Query: 112 DGPPGMDP-GTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRD 288
+GP GMDP G ++T+WD VV+ FDDMNLKE LLRG+YAYGFEKPSAIQQRAI+PCI+G D
Sbjct: 10 NGPEGMDPDGVIETNWDTVVDNFDDMNLKESLLRGVYAYGFEKPSAIQQRAILPCIKGHD 69
Query: 289 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKV 432
VIAQAQSGTGKTATF ISILQ+IDTS++E QALILAPTRELAQQ K+
Sbjct: 70 VIAQAQSGTGKTATFVISILQRIDTSLKETQALILAPTRELAQQEWKL 117
>UniRef50_Q8XKJ8 Cluster: ATP-dependent RNA helicase; n=12;
Clostridium|Rep: ATP-dependent RNA helicase -
Clostridium perfringens
Length = 528
Score = 175 bits (425), Expect = 1e-42
Identities = 90/188 (47%), Positives = 120/188 (63%), Gaps = 2/188 (1%)
Frame = +1
Query: 175 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 354
FDD+ LKE LL+ I GFE+PS IQ +I ++G D+I QAQ+GTGKTA F +I+
Sbjct: 6 FDDLGLKESLLKAIKDMGFEEPSQIQAESIPVALEGHDIIGQAQTGTGKTAAFGCAIINN 65
Query: 355 IDTSIREC--QALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGV 528
D S ++ +ALILAPTRELA Q+ + ++ LG H GG + IR L++GV
Sbjct: 66 ADFSGKKKSPKALILAPTRELAIQVNEELVRLGKHEKLSVLPIYGGQPIDRQIRALKNGV 125
Query: 529 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVXVILL 708
+VVGTPGRV D+I R++L N I VLDEADEML+ GF D + ++ K L D +L
Sbjct: 126 DIVVGTPGRVLDLIRRKSLPLNDIGFLVLDEADEMLNMGFIDDLEEIVKSLKTDRQTLLF 185
Query: 709 SATMPDDV 732
SATMP +
Sbjct: 186 SATMPPQI 193
>UniRef50_A0BEU9 Cluster: Chromosome undetermined scaffold_102,
whole genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_102,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 395
Score = 175 bits (425), Expect = 1e-42
Identities = 80/192 (41%), Positives = 127/192 (66%)
Frame = +1
Query: 163 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSIS 342
+ TF+ M L++ELLRGI A+GF +P +QQRA++P IQGRDV+ Q TGKT S+S
Sbjct: 20 IQSTFESMKLRKELLRGINAFGFIRPLEVQQRALVPLIQGRDVVIQNFRSTGKTTVMSLS 79
Query: 343 ILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLES 522
+L D S+++ Q LIL TR+L ++ +++ALG LN HAC G ++++DI ++
Sbjct: 80 VLSIFDLSVKKIQVLILQKTRKLTEENAGLIMALGKFLNVSIHACSEGNSIQDDISVVQQ 139
Query: 523 GVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVXVI 702
GV +V+GTP RV++++ R+ + +K+ +LDEADEML K ++ +FK L +
Sbjct: 140 GVQIVLGTPDRVFELVQRKEISFAHLKMIILDEADEMLIDESKSLVYCIFKYLPPKPQYV 199
Query: 703 LLSATMPDDVLE 738
L++AT+ D+L+
Sbjct: 200 LVTATLSQDILD 211
>UniRef50_A4FZ46 Cluster: DEAD/DEAH box helicase domain protein;
n=4; Euryarchaeota|Rep: DEAD/DEAH box helicase domain
protein - Methanococcus maripaludis
Length = 541
Score = 173 bits (421), Expect = 4e-42
Identities = 84/193 (43%), Positives = 125/193 (64%), Gaps = 1/193 (0%)
Frame = +1
Query: 166 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQG-RDVIAQAQSGTGKTATFSIS 342
+E+F ++ L +E+L + GF P+ IQ++AI I+G RD++ QAQ+GTGKTA F I
Sbjct: 1 MESFKNLGLSDEILEALEKKGFTTPTPIQEQAIPILIEGKRDIVGQAQTGTGKTAAFGIP 60
Query: 343 ILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLES 522
IL+ ID S R QALILAPTRELA Q+ + + ++ GG ++ IR+L
Sbjct: 61 ILETIDESSRNTQALILAPTRELAIQVAEEIDSIKGSKRLNVFPVYGGQSIDRQIRELRR 120
Query: 523 GVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVXVI 702
GV +VVGTPGR+ D I+RR + + VLDEADEML+ GF D + ++ K +S + ++
Sbjct: 121 GVQIVVGTPGRILDHISRRTIKLENVSYVVLDEADEMLNMGFIDDVEEILKSVSTEKRML 180
Query: 703 LLSATMPDDVLEV 741
L SAT+PD ++++
Sbjct: 181 LFSATLPDSIMKL 193
>UniRef50_Q725W5 Cluster: ATP-dependent RNA helicase, DEAD/DEAH
family; n=2; Desulfovibrio vulgaris subsp. vulgaris|Rep:
ATP-dependent RNA helicase, DEAD/DEAH family -
Desulfovibrio vulgaris (strain Hildenborough / ATCC
29579 / NCIMB8303)
Length = 532
Score = 172 bits (419), Expect = 7e-42
Identities = 90/193 (46%), Positives = 118/193 (61%), Gaps = 1/193 (0%)
Frame = +1
Query: 166 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 345
VE+F D+ L+EELL+ I GF +PS IQ AI ++GRDVI QAQ+GTGKTA F + +
Sbjct: 4 VESFKDLPLEEELLKAIEELGFTEPSPIQSIAIPRLLEGRDVIGQAQTGTGKTAAFGLPL 63
Query: 346 LQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNVREDIRQLES 522
LQ+ID + R QAL+L PTRELA Q+ + AL HL + + GG + L
Sbjct: 64 LQRIDAADRSVQALVLCPTRELALQVANGLTALAKHLRGVRILSVYGGQPIEPQASALRR 123
Query: 523 GVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVXVI 702
G VVVGTPGR+ D I R L +++ VLDEADEML GF++ I + + V
Sbjct: 124 GAQVVVGTPGRILDHINRGTLQLGVVRMTVLDEADEMLDMGFREDIERILSEMPEWVQSA 183
Query: 703 LLSATMPDDVLEV 741
SATMPD +LE+
Sbjct: 184 FFSATMPDGILEL 196
>UniRef50_Q5KJI2 Cluster: ATP-dependent RNA helicase DHH1; n=4;
Dikarya|Rep: ATP-dependent RNA helicase DHH1 -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 625
Score = 172 bits (419), Expect = 7e-42
Identities = 94/214 (43%), Positives = 130/214 (60%), Gaps = 1/214 (0%)
Frame = +1
Query: 100 QGSYDGPPGMDPGTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQ 279
QG P + P T D Q F+D L+ ELL GIY GFE+PS IQ++AI +
Sbjct: 14 QGLAAPPKDLRPQTEDVTATQG-SRFEDFGLRRELLMGIYTAGFERPSPIQEQAIPMALT 72
Query: 280 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL- 456
GRD++A+A++GTGKTA+F I L +I+TS+ QALIL PTRELA Q +V LG H+
Sbjct: 73 GRDILARAKNGTGKTASFIIPTLNRINTSLSHIQALILVPTRELALQTSQVCKTLGAHIP 132
Query: 457 NAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEML 636
N + GGT +R+DI +L+ VH++VGTPGR+ D+ ++ N +FV+DEAD++L
Sbjct: 133 NLQVMITTGGTTLRDDILRLQQPVHILVGTPGRILDLGSKGIASLNKCGVFVMDEADKLL 192
Query: 637 SRGFKDQIHDVFKMLSADVXVILLSATMPDDVLE 738
S F I + + V+L SAT P V E
Sbjct: 193 SEDFMPVIEQTLALCPQERQVMLFSATFPWTVKE 226
>UniRef50_Q67NW1 Cluster: ATP-dependent RNA helicase; n=5;
Firmicutes|Rep: ATP-dependent RNA helicase -
Symbiobacterium thermophilum
Length = 526
Score = 170 bits (414), Expect = 3e-41
Identities = 83/187 (44%), Positives = 119/187 (63%)
Frame = +1
Query: 172 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 351
TF D+ L E++L+ + GFE+PS IQ +AI +QG+DVI QAQ+GTGKTA F + I++
Sbjct: 7 TFRDLALSEKVLKALDDMGFEEPSPIQAQAIPALLQGKDVIGQAQTGTGKTAAFGVPIVE 66
Query: 352 QIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVH 531
++ R QAL+L PTRELA Q+ + + +G H K A GG ++ IR L GV
Sbjct: 67 RLVPGQRAVQALVLTPTRELAIQVAEEITKIGRHARVKTIAIYGGQSIERQIRSLRFGVD 126
Query: 532 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVXVILLS 711
VV+GTPGR+ D + R L + +++ VLDEADEML GF + I + + A+ +L S
Sbjct: 127 VVIGTPGRILDHLGRSTLDLSQVRMVVLDEADEMLDMGFIEDIEKILQNTPAERQTLLFS 186
Query: 712 ATMPDDV 732
ATMP ++
Sbjct: 187 ATMPPEI 193
>UniRef50_Q8SQM5 Cluster: ATP-dependent RNA helicase eIF4A; n=1;
Encephalitozoon cuniculi|Rep: ATP-dependent RNA helicase
eIF4A - Encephalitozoon cuniculi
Length = 425
Score = 170 bits (413), Expect = 4e-41
Identities = 91/201 (45%), Positives = 126/201 (62%), Gaps = 2/201 (0%)
Frame = +1
Query: 145 DTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKT 324
D+ ++ +T++D LKE+LL+GIY+ GFE PS IQ+ AI P I GRD+ AQAQSGTGKT
Sbjct: 30 DSSQIRMFDTWEDYGLKEDLLKGIYSIGFETPSFIQKAAIQPIIDGRDIRAQAQSGTGKT 89
Query: 325 ATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVRED 504
F+++ LQ D S Q L+LA TRE+A Q LG + A+ GG+ + D
Sbjct: 90 GAFAVAALQICDMSQDVTQILVLASTREIAAQNAARFEDLGCFMGARVALLSGGSPIAAD 149
Query: 505 IRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLS 684
LE H+VVGTPGRV MI L + IKLFV+DEADEML GF++Q+ +F+ ++
Sbjct: 150 KVALEKKPHIVVGTPGRVEHMININELSMDNIKLFVIDEADEMLKAGFQEQVKSIFRRIT 209
Query: 685 --ADVXVILLSATMPDDVLEV 741
+V + + SAT ++ L V
Sbjct: 210 NKDEVQIAMFSATYDEEELRV 230
>UniRef50_Q4SP80 Cluster: Chromosome 15 SCAF14542, whole genome
shotgun sequence; n=5; Euteleostomi|Rep: Chromosome 15
SCAF14542, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 366
Score = 166 bits (404), Expect = 4e-40
Identities = 80/111 (72%), Positives = 95/111 (85%), Gaps = 1/111 (0%)
Frame = +1
Query: 91 SKDQGSYDGPPGMDP-GTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIM 267
SKD G GP GM+P G ++++W ++ + FDDMNLKE LLRGIYAYGFEKPSAIQQRAI+
Sbjct: 11 SKDHG---GPDGMEPDGIIESNWTEITDNFDDMNLKESLLRGIYAYGFEKPSAIQQRAII 67
Query: 268 PCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQ 420
PCI+G DVIAQAQSGTGKTATF+ISILQQ++ +E QAL+LAPTRELAQQ
Sbjct: 68 PCIKGYDVIAQAQSGTGKTATFAISILQQLEIDQKETQALVLAPTRELAQQ 118
Score = 33.9 bits (74), Expect = 4.2
Identities = 15/24 (62%), Positives = 20/24 (83%)
Frame = +1
Query: 670 FKMLSADVXVILLSATMPDDVLEV 741
F+ LS ++ V+LLSATMP +VLEV
Sbjct: 160 FQKLSTNIQVVLLSATMPAEVLEV 183
>UniRef50_A2SQE1 Cluster: DEAD/DEAH box helicase domain protein;
n=6; cellular organisms|Rep: DEAD/DEAH box helicase
domain protein - Methanocorpusculum labreanum (strain
ATCC 43576 / DSM 4855 / Z)
Length = 656
Score = 163 bits (397), Expect = 3e-39
Identities = 84/192 (43%), Positives = 119/192 (61%), Gaps = 1/192 (0%)
Frame = +1
Query: 169 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISIL 348
+TF + + EELL+ I GFE+P+ IQ AI + G+DV QAQ+GTGKTA F I I+
Sbjct: 5 KTFAEFAISEELLQAIGDMGFEEPTPIQAMAIPQILDGKDVTGQAQTGTGKTAAFGIPII 64
Query: 349 QQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACI-GGTNVREDIRQLESG 525
+++D + QAL+L+PTRELA Q + L + I GG + +R L+
Sbjct: 65 ERLDPDNKNVQALVLSPTRELAIQTAEEFSRLMKYKKGLNVVPIYGGQPIERQLRALKGT 124
Query: 526 VHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVXVIL 705
V VV+GTPGRV D I R LH +++ +F+LDEAD+ML GF++ I D+F+ D IL
Sbjct: 125 VQVVIGTPGRVIDHIKRGTLHLDSVTMFILDEADQMLDMGFREDIEDIFRDTPKDRQTIL 184
Query: 706 LSATMPDDVLEV 741
SATMP +L++
Sbjct: 185 FSATMPQPILDI 196
>UniRef50_Q81VG0 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=16; cellular organisms|Rep: DEAD-box ATP-dependent RNA
helicase ydbR - Bacillus anthracis
Length = 528
Score = 160 bits (388), Expect = 4e-38
Identities = 74/190 (38%), Positives = 114/190 (60%)
Frame = +1
Query: 172 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 351
TF ++ L + LL+ + + GFE+ + IQ I +QG+D+I QAQ+GTGKTA F + +L
Sbjct: 3 TFRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLD 62
Query: 352 QIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVH 531
++DT Q +++APTRELA Q+ + + +G H + GG ++ IR L+ H
Sbjct: 63 KVDTHKESVQGIVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRALKKHPH 122
Query: 532 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVXVILLS 711
++VGTPGR+ D I R+ L ++ VLDEADEML+ GF + I + + +L S
Sbjct: 123 IIVGTPGRILDHINRKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPETHQTLLFS 182
Query: 712 ATMPDDVLEV 741
ATMPD + +
Sbjct: 183 ATMPDPIRRI 192
>UniRef50_A7HDE9 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Anaeromyxobacter sp. Fw109-5|Rep: DEAD/DEAH box
helicase domain protein - Anaeromyxobacter sp. Fw109-5
Length = 680
Score = 159 bits (387), Expect = 5e-38
Identities = 76/190 (40%), Positives = 119/190 (62%)
Frame = +1
Query: 172 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 351
+FD++ L E + R I +G+E+P+ +Q P G+DVI ++++GTGKTA F+I IL+
Sbjct: 21 SFDELGLSEPVRRAIAEHGYERPTPVQVSTFRPVRDGKDVIVRSKTGTGKTAAFAIPILE 80
Query: 352 QIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVH 531
+I R AL++ PTRELA Q+ + AL H + A GG ++ E +++LE+G
Sbjct: 81 RIADGRRRPSALVMCPTRELAIQVAQEFTALAKHRDLSVVAVYGGASMGEQLQKLEAGAE 140
Query: 532 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVXVILLS 711
++VGTPGR+YD I RR L + + LDEADEML+ GF +++ + L D +L S
Sbjct: 141 IIVGTPGRIYDHIRRRTLKLDETMVCCLDEADEMLNMGFFEEVTRILDNLPKDCQQLLFS 200
Query: 712 ATMPDDVLEV 741
AT+P D+ ++
Sbjct: 201 ATVPADIEQI 210
>UniRef50_Q9KLE2 Cluster: ATP-dependent RNA helicase DeaD; n=35;
Vibrionales|Rep: ATP-dependent RNA helicase DeaD -
Vibrio cholerae
Length = 663
Score = 158 bits (384), Expect = 1e-37
Identities = 80/190 (42%), Positives = 116/190 (61%), Gaps = 1/190 (0%)
Frame = +1
Query: 175 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 354
F D+ L +L + GF P+ IQ AI ++GRD + +AQ+GTGKTA FS+ +L +
Sbjct: 28 FSDLALNSAILSALTEMGFVSPTPIQAAAIPVLLEGRDALGKAQTGTGKTAAFSLPLLNK 87
Query: 355 IDTSIRECQALILAPTRELAQQIQKVVIALGDHLNA-KCHACIGGTNVREDIRQLESGVH 531
++ S + QA+++APTRELA Q+ + LG ++ K GG ++ + +R L+SG H
Sbjct: 88 LNLSQYKPQAIVMAPTRELAIQVAAEIKNLGQNIKGLKVLEIYGGASILDQMRALKSGAH 147
Query: 532 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVXVILLS 711
+VVGTPGRV D+ITR LH + F+LDEADEML GF D + + + +L S
Sbjct: 148 IVVGTPGRVKDLITRDRLHLDECHTFILDEADEMLKMGFVDDVTWIMEQAPESAQRVLFS 207
Query: 712 ATMPDDVLEV 741
ATMP V E+
Sbjct: 208 ATMPPMVKEI 217
>UniRef50_Q8YXJ0 Cluster: ATP-dependent RNA helicase; n=11;
Cyanobacteria|Rep: ATP-dependent RNA helicase - Anabaena
sp. (strain PCC 7120)
Length = 513
Score = 158 bits (384), Expect = 1e-37
Identities = 77/187 (41%), Positives = 113/187 (60%)
Frame = +1
Query: 172 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 351
+F ++ + +E + + GF P+ IQ +AI + GRDV+ Q+Q+GTGKTA FS+ IL+
Sbjct: 4 SFPELGISQERVEHLEKLGFTAPTNIQAQAIPQLLSGRDVVGQSQTGTGKTAAFSLPILE 63
Query: 352 QIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVH 531
++D + QA++L PTRELA Q+ + + + A GG ++ + QL+ GVH
Sbjct: 64 RLDPQQKAVQAIVLTPTRELAIQVHDAMAQFVGNSGLRTLAIYGGQSIDRQMLQLKRGVH 123
Query: 532 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVXVILLS 711
+VVGTPGRV D++ R L + +K FVLDEADEMLS GF D + + D L S
Sbjct: 124 IVVGTPGRVIDLLERGNLKLDQVKWFVLDEADEMLSMGFIDDVEKILSQAPQDRQTALFS 183
Query: 712 ATMPDDV 732
ATMP +
Sbjct: 184 ATMPPSI 190
>UniRef50_Q9KAA6 Cluster: ATP-dependent RNA helicase; n=5;
Firmicutes|Rep: ATP-dependent RNA helicase - Bacillus
halodurans
Length = 539
Score = 157 bits (381), Expect = 3e-37
Identities = 78/183 (42%), Positives = 112/183 (61%)
Frame = +1
Query: 175 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 354
F+++ + EE+ + I GFE+PS IQ +AI + G DVI QAQ+GTGKTA F I ++++
Sbjct: 8 FNELQIGEEIKKAIIEMGFEEPSPIQAKAIPAILAGGDVIGQAQTGTGKTAAFGIPVVEK 67
Query: 355 IDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHV 534
+ T R QALIL PTRELA Q+ + L H + GG ++ I+ L+ GV V
Sbjct: 68 VSTG-RHVQALILTPTRELAIQVSGEIQKLSKHKKIRTLPIYGGQSIVHQIKALKQGVQV 126
Query: 535 VVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVXVILLSA 714
V+GTPGR+ D + R+ L + + +LDEADEML GF D I + + + + +L SA
Sbjct: 127 VIGTPGRIIDHLRRKTLILDHVNTVILDEADEMLDMGFIDDIESILRQVKNERQTLLFSA 186
Query: 715 TMP 723
TMP
Sbjct: 187 TMP 189
>UniRef50_A2DVG1 Cluster: DEAD/DEAH box helicase family protein;
n=3; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 478
Score = 156 bits (379), Expect = 5e-37
Identities = 91/217 (41%), Positives = 122/217 (56%), Gaps = 5/217 (2%)
Frame = +1
Query: 106 SYDG-PPGMDPGTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI--MPCI 276
SY+ P D +W V+ FD M+L LL+G+Y+YGF PS IQ AI +
Sbjct: 69 SYEAMTPAQDDPNFIPNWTTRVDDFDQMDLPPALLQGVYSYGFRAPSEIQAIAIGAIRDP 128
Query: 277 QGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL 456
R VIAQAQSGTGKT FSI +L +ID S + QAL+LAPTRELA QI V +G +
Sbjct: 129 SNRHVIAQAQSGTGKTGAFSIGVLSKIDVSQKTTQALVLAPTRELATQIFNVFKEIGSRI 188
Query: 457 NAKCHAC-IGGTNVREDIR-QLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADE 630
A IGG D + + S H+ + TPGR D+I L K+ VLDEAD+
Sbjct: 189 PGLDIAIFIGGAQRVVDAQARAASHPHICICTPGRALDLIVSGHLRVQNFKMAVLDEADQ 248
Query: 631 MLSRGFKDQIHDVFKMLSADVXVILLSATMPDDVLEV 741
MLS F +Q++D+ + DV ++L SAT+ + +
Sbjct: 249 MLSDNFIEQVNDIMEYFPEDVQILLFSATISQSIFHI 285
>UniRef50_P96614 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=90; Bacilli|Rep: DEAD-box ATP-dependent RNA helicase
ydbR - Bacillus subtilis
Length = 494
Score = 156 bits (379), Expect = 5e-37
Identities = 75/190 (39%), Positives = 114/190 (60%)
Frame = +1
Query: 172 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 351
TF D NL +L++ I GFE+ + IQ + I + +DVI QAQ+GTGKTA F I +++
Sbjct: 4 TFQDFNLSSDLMKAINRMGFEEATPIQAQTIPLGLSNKDVIGQAQTGTGKTAAFGIPLVE 63
Query: 352 QIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVH 531
+I+ QA+++APTRELA Q+ + + +G AK GG ++ IR L+ +
Sbjct: 64 KINPESPNIQAIVIAPTRELAIQVSEELYKIGQDKRAKVLPIYGGQDIGRQIRALKKNPN 123
Query: 532 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVXVILLS 711
++VGTPGR+ D I RR + N + V+DEADEML+ GF D I + + ++ +L S
Sbjct: 124 IIVGTPGRLLDHINRRTIRLNNVNTVVMDEADEMLNMGFIDDIESILSNVPSEHQTLLFS 183
Query: 712 ATMPDDVLEV 741
ATMP + +
Sbjct: 184 ATMPAPIKRI 193
>UniRef50_Q9S531 Cluster: DEAD-box protein; n=4;
Cystobacterineae|Rep: DEAD-box protein - Myxococcus
xanthus
Length = 808
Score = 156 bits (378), Expect = 6e-37
Identities = 77/186 (41%), Positives = 113/186 (60%)
Frame = +1
Query: 175 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 354
FDDMNL E + + G+ P+ +Q RA P I+G+D+I ++++GTGKTA F + +L++
Sbjct: 31 FDDMNLSEPIRLALAERGYTNPTPVQARAFRPAIEGKDLIVRSKTGTGKTAAFGLPLLEK 90
Query: 355 IDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHV 534
I R +ALIL PTRELA Q+ + L H K A GG ++++ LE G +
Sbjct: 91 IPADERRVRALILCPTRELALQVADELKMLAKHKGLKIAAIYGGASMKQQEDALEEGTPI 150
Query: 535 VVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVXVILLSA 714
+VGTPGRV+D I R L + VLDEADEML++GF +++ + L V+L SA
Sbjct: 151 IVGTPGRVFDHINRGNLKLDACDHAVLDEADEMLNQGFYEEVTRILDRLPKTRQVLLFSA 210
Query: 715 TMPDDV 732
T+P D+
Sbjct: 211 TVPTDI 216
>UniRef50_Q0E2Q3 Cluster: Putative eukaryotic initiation factor
4A-2; n=5; Oryza sativa|Rep: Putative eukaryotic
initiation factor 4A-2 - Oryza sativa subsp. japonica
(Rice)
Length = 416
Score = 155 bits (377), Expect = 8e-37
Identities = 94/232 (40%), Positives = 130/232 (56%), Gaps = 1/232 (0%)
Frame = +1
Query: 49 RRSEDWPEDSKNGPSKDQGSY-DGPPGMDPGTLDTDWDQVVETFDDMNLKEELLRGIYAY 225
++S+D E +G +KD S ++ T D +V T + E L+
Sbjct: 10 QKSDD--ESGGDGNNKDSNSIAPSAIAINSKKKQTTKD-IVTTQGAQFISESLIGETQTK 66
Query: 226 GFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTR 405
+KPSA+ QR I+P G D+I Q+ GT T T ILQ++D + ECQAL+L PT
Sbjct: 67 DLDKPSAVHQRGIVPLCNGLDIIQQSLFGT--TVTLCCGILQRLDYASTECQALVLVPTH 124
Query: 406 ELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRAL 585
+LA + Q V+ LG L+AK HA GGT+ ED + L +GV V VGTP V M+ RAL
Sbjct: 125 DLAHETQNVIGVLGQFLSAKAHAFCGGTSAHEDQQILSTGVQVAVGTPCHVLGMLQGRAL 184
Query: 586 HANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVXVILLSATMPDDVLEV 741
+ I++FVLDEADE+L RGFKDQIH + + L SA+M + LE+
Sbjct: 185 CPDHIRMFVLDEADEVL-RGFKDQIHGIIQFLPTKTQFGFFSASMSHEALEM 235
>UniRef50_A6NQG8 Cluster: Putative uncharacterized protein; n=2;
Bacteroidales|Rep: Putative uncharacterized protein -
Bacteroides capillosus ATCC 29799
Length = 636
Score = 155 bits (376), Expect = 1e-36
Identities = 79/193 (40%), Positives = 119/193 (61%), Gaps = 3/193 (1%)
Frame = +1
Query: 172 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 351
TF ++ L + +L+ + G+EKPS IQ++AI P + GRDV+ AQ+GTGKT F+ ILQ
Sbjct: 2 TFRELGLTQSILKALAELGYEKPSPIQEKAIPPALAGRDVLGCAQTGTGKTCAFAAPILQ 61
Query: 352 QIDTSI---RECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLES 522
++ I R ++LIL PTRELA QIQ+ A G HL + GG + + +L+
Sbjct: 62 RLGGDIPAGRPIRSLILTPTRELALQIQESFEAYGKHLPLRSAVIFGGVGQQPQVDKLKK 121
Query: 523 GVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVXVI 702
GV ++V TPGR+ D+ + + + +++FVLDEAD ML GF + V K+L A +
Sbjct: 122 GVDILVATPGRLLDLQGQGFVDLSRLEIFVLDEADRMLDMGFLHDVRRVLKLLPAVKQTL 181
Query: 703 LLSATMPDDVLEV 741
SATMP +V+++
Sbjct: 182 FFSATMPPEVMDL 194
>UniRef50_Q5L3G9 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=7; Bacteria|Rep: DEAD-box ATP-dependent RNA helicase
ydbR - Geobacillus kaustophilus
Length = 467
Score = 155 bits (375), Expect = 1e-36
Identities = 76/190 (40%), Positives = 114/190 (60%)
Frame = +1
Query: 172 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 351
TF ++ L +E+++ I GFE+ + IQ + I +Q +DVI QAQ+GTGKTA F I I++
Sbjct: 3 TFQELGLSQEVMKAIERMGFEETTPIQAKTIPLSLQNKDVIGQAQTGTGKTAAFGIPIVE 62
Query: 352 QIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVH 531
+++ QAL++APTRELA Q+ + + +G + GG ++ IR L+ H
Sbjct: 63 KVNVKNSAVQALVVAPTRELAIQVSEELYKIGAVKRVRVLPIYGGQDIERQIRALKKHPH 122
Query: 532 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVXVILLS 711
V+VGTPGR+ D I R L + VLDEADEML+ GF + I + + A+ +L S
Sbjct: 123 VIVGTPGRIIDHINRGTLRLEHVHTVVLDEADEMLNMGFIEDIEAILSHVPAERQTLLFS 182
Query: 712 ATMPDDVLEV 741
ATMPD + +
Sbjct: 183 ATMPDPIRRI 192
>UniRef50_Q7UNV7 Cluster: ATP-dependent RNA helicase; n=2;
Planctomycetaceae|Rep: ATP-dependent RNA helicase -
Rhodopirellula baltica
Length = 452
Score = 154 bits (373), Expect = 2e-36
Identities = 79/188 (42%), Positives = 114/188 (60%), Gaps = 2/188 (1%)
Frame = +1
Query: 166 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 345
+++FD+++L + R + GF PS IQ I + G+DVI QA++GTGKTA FSI I
Sbjct: 43 MDSFDELDLSPIMRRAVKDAGFTTPSPIQAALIPHALNGKDVIGQARTGTGKTAAFSIPI 102
Query: 346 LQQIDT--SIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLE 519
L+Q+D+ R+ QA+++ PTRELA Q+ L + + GG N+ +RQLE
Sbjct: 103 LEQLDSLEDCRDPQAIVIVPTRELADQVAAEAERLARGVPTEIAVLSGGKNMNRQLRQLE 162
Query: 520 SGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVXV 699
+G +VVGTPGRV+D + R L N + VLDEAD ML GF+ QI + + +
Sbjct: 163 NGTQLVVGTPGRVHDHLQRGTLRTNNVWCVVLDEADRMLDIGFRPQIERIMRKCPRNRQT 222
Query: 700 ILLSATMP 723
+LLSAT+P
Sbjct: 223 LLLSATLP 230
>UniRef50_Q6AMK6 Cluster: Probable ATP-dependent RNA helicase; n=1;
Desulfotalea psychrophila|Rep: Probable ATP-dependent
RNA helicase - Desulfotalea psychrophila
Length = 632
Score = 153 bits (372), Expect = 3e-36
Identities = 79/190 (41%), Positives = 111/190 (58%)
Frame = +1
Query: 172 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 351
+F D NLK +L+ + GF +P+ IQ++AI + G D+I QAQ+GTGKTA F + +L
Sbjct: 56 SFTDFNLKSDLVANLVKLGFSQPTPIQEKAIPLLLAGSDLIGQAQTGTGKTAAFGLPLLN 115
Query: 352 QIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVH 531
ID S + QAL+LAPTRELAQQ+ + GG++ + + L G
Sbjct: 116 NIDFSKKCVQALVLAPTRELAQQVGDALATYSGDDGRNVLVVYGGSSYQAQVGGLRRGAR 175
Query: 532 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVXVILLS 711
VVVGTPGR+ D+I + +L + +K VLDEADEMLS GF D I + D +L S
Sbjct: 176 VVVGTPGRLLDLIRQGSLKLDQLKTLVLDEADEMLSMGFIDDIETILSQTPKDRQTMLFS 235
Query: 712 ATMPDDVLEV 741
AT+ V+ +
Sbjct: 236 ATLSSRVMSI 245
>UniRef50_A2TP65 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family protein; n=13; Bacteroidetes|Rep: ATP-dependent
RNA helicase, DEAD/DEAH box family protein - Dokdonia
donghaensis MED134
Length = 638
Score = 153 bits (372), Expect = 3e-36
Identities = 82/192 (42%), Positives = 112/192 (58%), Gaps = 2/192 (1%)
Frame = +1
Query: 172 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCI-QGRDVIAQAQSGTGKTATFSISIL 348
TFD + L LL+ I GFE PS IQ+ AI + + RD++A AQ+GTGKTA F +L
Sbjct: 2 TFDQLGLNAPLLQAIADMGFETPSKIQEEAIPQLLAEDRDMVALAQTGTGKTAAFGFPLL 61
Query: 349 QQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNA-KCHACIGGTNVREDIRQLESG 525
Q ID S + Q LI+APTREL QI + H+ + A GG+N++E R++ G
Sbjct: 62 QNIDASSKTTQGLIIAPTRELCLQITNEMKLYAKHIKGVRVVAVYGGSNIQEQAREISRG 121
Query: 526 VHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVXVIL 705
+VV TPGR+ DM+ RR + + VLDEADEML+ GF + I ++ D L
Sbjct: 122 AQIVVATPGRMQDMMRRRMVDITKLSYCVLDEADEMLNMGFYEDITNILADTPEDKLTWL 181
Query: 706 LSATMPDDVLEV 741
SATMP +V +
Sbjct: 182 FSATMPREVARI 193
>UniRef50_Q1QYG3 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Chromohalobacter salexigens DSM 3043|Rep: DEAD/DEAH box
helicase-like protein - Chromohalobacter salexigens
(strain DSM 3043 / ATCC BAA-138 / NCIMB13768)
Length = 568
Score = 153 bits (371), Expect = 4e-36
Identities = 78/191 (40%), Positives = 112/191 (58%), Gaps = 1/191 (0%)
Frame = +1
Query: 172 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 351
TF +++L +L + G+E PS IQ + I ++GRDV+ QAQ+GTGKTA F++ +L
Sbjct: 10 TFAELSLPSTILSTLETLGYETPSLIQAKTIPALLEGRDVLGQAQTGTGKTAAFALPLLS 69
Query: 352 QIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNA-KCHACIGGTNVREDIRQLESGV 528
++D RE Q L+LAPTRELAQQ+ + G + + + GG RE + L G
Sbjct: 70 RLDLQRREPQVLVLAPTRELAQQVAASFVQYGRGVKGLEVLSLCGGQEYREQLSGLRRGA 129
Query: 529 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVXVILL 708
V+VGTPGRV D + R +L + + VLDEADEML GF D + V D +
Sbjct: 130 QVIVGTPGRVIDHLDRGSLKLDGLNALVLDEADEMLRMGFIDDVKRVVSDTPKDAQRVFF 189
Query: 709 SATMPDDVLEV 741
SAT+PD++ +
Sbjct: 190 SATLPDEISRI 200
>UniRef50_A2EPG4 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 389
Score = 151 bits (366), Expect = 2e-35
Identities = 78/194 (40%), Positives = 124/194 (63%)
Frame = +1
Query: 160 QVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSI 339
+V T++ M LK EL+ I G+EKPS IQQRAI QG++++ Q+Q+G+GKTATFSI
Sbjct: 17 EVYPTWESMKLKPELIEAIKKNGWEKPSPIQQRAIYIISQGKNIMFQSQNGSGKTATFSI 76
Query: 340 SILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLE 519
L ++ + + + +I++PTRELA Q + + +LG A AC+GG ++ D++ L+
Sbjct: 77 GTLARLRLTSKTTELIIVSPTRELAIQTENTLKSLG----ANTRACVGGNSLGADVKALQ 132
Query: 520 SGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVXV 699
G+H V GTPGR+ ++ + A ++ VLDEADEML+ FK I D+ + L
Sbjct: 133 KGIHCVSGTPGRILQLLKEHNIQAEKVQSVVLDEADEMLT-SFKSTIMDILQKL-PHAQK 190
Query: 700 ILLSATMPDDVLEV 741
++++AT+ DV+E+
Sbjct: 191 VIVTATVSADVVEL 204
>UniRef50_Q3AFI3 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=1; Carboxydothermus hydrogenoformans
Z-2901|Rep: ATP-dependent RNA helicase, DEAD box family
- Carboxydothermus hydrogenoformans (strain Z-2901 / DSM
6008)
Length = 430
Score = 151 bits (365), Expect = 2e-35
Identities = 78/186 (41%), Positives = 110/186 (59%)
Frame = +1
Query: 166 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 345
+E F + L LL+ + GFE P+ IQ+ AI ++G +++ QA +GTGKTA + + +
Sbjct: 1 MEEFKKLGLITPLLKAVNDLGFEMPTPIQKEAIPLILEGHNLVGQAPTGTGKTAAYLLPV 60
Query: 346 LQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESG 525
LQ+I ++ Q LI+ PTRELA Q+ V LG +L + A GG + IR L G
Sbjct: 61 LQRIQRG-KKAQVLIVTPTRELALQVADEVAKLGKYLKVRALAVYGGQAIERQIRGLRQG 119
Query: 526 VHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVXVIL 705
V V+VGTPGR+ D I R+ A IK+ +LDEADEML GF D I + L+ +L
Sbjct: 120 VEVIVGTPGRILDHIGRKTFPAAEIKIVILDEADEMLDMGFIDDIEAILNTLTNRQQTLL 179
Query: 706 LSATMP 723
SAT+P
Sbjct: 180 FSATLP 185
>UniRef50_Q1MY97 Cluster: DEAD/DEAH box helicase-like protein; n=2;
Gammaproteobacteria|Rep: DEAD/DEAH box helicase-like
protein - Oceanobacter sp. RED65
Length = 614
Score = 151 bits (365), Expect = 2e-35
Identities = 82/190 (43%), Positives = 110/190 (57%), Gaps = 1/190 (0%)
Frame = +1
Query: 175 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 354
F + L LLR I G+E+PS IQ+++I ++G+DV+ AQ+GTGKTA F++ +L +
Sbjct: 8 FASLGLPFNLLRAIEEQGYEQPSPIQEQSIPHLLEGKDVLGLAQTGTGKTAAFTLPLLAR 67
Query: 355 IDTSIRECQALILAPTRELAQQIQKVVIALGDH-LNAKCHACIGGTNVREDIRQLESGVH 531
+RE Q L+LAPTRELAQQ+ V + H N K + GG++ R L+ G
Sbjct: 68 TQNEVREPQVLVLAPTRELAQQVAMAVESYSKHESNVKVASIYGGSDFGSQFRALKQGPQ 127
Query: 532 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVXVILLS 711
VVGTPGRV D I R L I+ VLDEADEML GF D + V + + L S
Sbjct: 128 WVVGTPGRVMDHIRRGTLKLEGIRAVVLDEADEMLRMGFIDDVDWVLDQVPEKRQIALFS 187
Query: 712 ATMPDDVLEV 741
ATMP + V
Sbjct: 188 ATMPKQIKAV 197
>UniRef50_Q2NEZ7 Cluster: Predicted helicase; n=6; cellular
organisms|Rep: Predicted helicase - Methanosphaera
stadtmanae (strain DSM 3091)
Length = 583
Score = 150 bits (364), Expect = 3e-35
Identities = 77/190 (40%), Positives = 113/190 (59%), Gaps = 1/190 (0%)
Frame = +1
Query: 175 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 354
F D+N+ E+ + + GFE+ S IQ AI + +DV QAQ+GTGKTA F I +L+
Sbjct: 6 FKDLNISPEIQKAVADMGFEEASPIQSLAIPQILAHKDVTGQAQTGTGKTAAFGIPLLEN 65
Query: 355 IDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNVREDIRQLESGVH 531
ID+ QA+IL PTRELA Q+ + + L +L GG + I+ L+ GV
Sbjct: 66 IDSEDNNLQAIILCPTRELAIQVAEELRKLSVYLPKIDVLPVYGGQPIDRQIKALQKGVQ 125
Query: 532 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVXVILLS 711
+++GTPGRV D I R L N IK +LDEADEML GF++ I + + + + +L S
Sbjct: 126 IIIGTPGRVMDHIDRGTLSLNNIKTVILDEADEMLDMGFREDIEYILEDIPYERQFLLFS 185
Query: 712 ATMPDDVLEV 741
AT+P ++L++
Sbjct: 186 ATLPQEILQL 195
>UniRef50_Q98RE0 Cluster: ATP-DEPENDENT RNA HELICASE; n=1;
Mycoplasma pulmonis|Rep: ATP-DEPENDENT RNA HELICASE -
Mycoplasma pulmonis
Length = 480
Score = 150 bits (363), Expect = 4e-35
Identities = 75/184 (40%), Positives = 110/184 (59%)
Frame = +1
Query: 175 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 354
F MN+K E+L+ + GFEKP+ IQ+ + +G+D+I QAQ+GTGKTA F+I IL
Sbjct: 3 FTQMNIKSEILKSLDEIGFEKPTKIQEAVLPFAFEGKDIIGQAQTGTGKTAAFAIPILSN 62
Query: 355 IDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHV 534
+D SI Q L++APTRELA QI + LG + +K +GG + + L SGV++
Sbjct: 63 LDCSINRIQHLVIAPTRELANQIYDQLNILGKYTCSKIALILGGVSYEKQKAALNSGVNI 122
Query: 535 VVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVXVILLSA 714
VV TPGR+ D++ + + + IK F LDEADE+L GF ++I + L +A
Sbjct: 123 VVATPGRLEDLLAQNKIDLSHIKTFTLDEADELLKIGFYNEIIKIMNKLPKKRQNFFFTA 182
Query: 715 TMPD 726
T +
Sbjct: 183 TFDE 186
>UniRef50_Q484Q1 Cluster: RNA helicase DeaD; n=1; Colwellia
psychrerythraea 34H|Rep: RNA helicase DeaD - Colwellia
psychrerythraea (strain 34H / ATCC BAA-681)
(Vibriopsychroerythus)
Length = 611
Score = 150 bits (363), Expect = 4e-35
Identities = 76/190 (40%), Positives = 114/190 (60%), Gaps = 1/190 (0%)
Frame = +1
Query: 175 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 354
F + L E LL + + GF + IQ I P + G+DV+ +AQ+GTGKTA F + L +
Sbjct: 17 FASLGLPENLLSAVLSIGFTSATDIQALTIPPLLAGKDVLGEAQTGTGKTAAFGLPALAK 76
Query: 355 IDTSIRECQALILAPTRELAQQIQKVVIALG-DHLNAKCHACIGGTNVREDIRQLESGVH 531
IDTSI++ Q ++LAPTRELA Q+ + + + G D + GG + +QLE G
Sbjct: 77 IDTSIKKPQLMVLAPTRELAMQVAEAIESFGKDMKGLRVATLYGGQSYGPQFQQLERGAQ 136
Query: 532 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVXVILLS 711
VVVGTPGR+ D + R++L + +++ VLDEADEML+ GF + I + + + L S
Sbjct: 137 VVVGTPGRLMDHLRRKSLKLDELRVCVLDEADEMLNMGFLEDIQWILDHIPKTAQMCLFS 196
Query: 712 ATMPDDVLEV 741
ATMP + ++
Sbjct: 197 ATMPPAIRKI 206
>UniRef50_Q11UP8 Cluster: ATP-dependent RNA helicase; n=1; Cytophaga
hutchinsonii ATCC 33406|Rep: ATP-dependent RNA helicase
- Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB
9469)
Length = 580
Score = 149 bits (362), Expect = 5e-35
Identities = 74/188 (39%), Positives = 114/188 (60%), Gaps = 1/188 (0%)
Frame = +1
Query: 175 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 354
F D+ L E++ I + G+ + + IQ++ I + G+D+ QAQ+GTGKTA F I ++
Sbjct: 3 FKDLGLSPEVVEAIESIGYSEATPIQEKTIPILMTGKDLTGQAQTGTGKTAAFGIPAIEH 62
Query: 355 IDTSIRECQALILAPTRELAQQIQKVVIALGDHLNA-KCHACIGGTNVREDIRQLESGVH 531
+D SI + Q+LIL PTRELA Q+ + L + A GG ++ IR L++G H
Sbjct: 63 VDISINQTQSLILCPTRELALQVCTELKKLSKFKKGLRVLAVYGGESIERQIRDLKAGAH 122
Query: 532 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVXVILLS 711
+VVGTPGR+ D + RR L+A+ + +LDEADEML+ GF++ I + L + +L S
Sbjct: 123 IVVGTPGRIIDHLDRRTLNASHLSQIILDEADEMLNMGFREDIELILTRLPEERQTVLFS 182
Query: 712 ATMPDDVL 735
AT+ +L
Sbjct: 183 ATLAPPIL 190
>UniRef50_A6TUK6 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Firmicutes|Rep: DEAD/DEAH box helicase domain
protein - Alkaliphilus metalliredigens QYMF
Length = 484
Score = 149 bits (362), Expect = 5e-35
Identities = 76/190 (40%), Positives = 111/190 (58%)
Frame = +1
Query: 163 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSIS 342
+ F D L +ELL+ I FE P+ +QQ+ I ++ +D+I ++Q+G+GKTA F+I
Sbjct: 2 IKSNFSDYQLSDELLKSISMLNFESPTKVQQQVIPAILEHKDIIVKSQTGSGKTAAFAIP 61
Query: 343 ILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLES 522
I Q +D + QAL+L PTRELA Q+++ + +G K A G ++L+
Sbjct: 62 ICQLVDWDENKPQALVLVPTRELAIQVKEDMFNIGRFKRLKVAAVYGKAPFYHQEKELKQ 121
Query: 523 GVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVXVI 702
HVVVGTPGR+ D + + + IK V+DEADEM + GF DQI + K LS +
Sbjct: 122 KTHVVVGTPGRIIDHMEKGTFDTSQIKYLVIDEADEMFNMGFVDQIETIIKDLSKKRVTM 181
Query: 703 LLSATMPDDV 732
LLSATMP +
Sbjct: 182 LLSATMPSAI 191
>UniRef50_Q5NZY2 Cluster: ATP-dependent RNA helicase DeaD; n=18;
Bacteria|Rep: ATP-dependent RNA helicase DeaD - Azoarcus
sp. (strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 658
Score = 149 bits (361), Expect = 7e-35
Identities = 77/193 (39%), Positives = 116/193 (60%), Gaps = 1/193 (0%)
Frame = +1
Query: 166 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 345
+E+F ++L+ LL + G+E PS IQ I + G D++ +AQ+GTGKTA F++ +
Sbjct: 43 IESFAQLDLRAPLLDALSEIGYETPSPIQAICIPHLLAGHDLLGEAQTGTGKTAAFALPL 102
Query: 346 LQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNA-KCHACIGGTNVREDIRQLES 522
L ++D +++ Q L+LAPTRELA Q+ + +L GG ++ +RQL
Sbjct: 103 LDRLDLAVKNPQVLVLAPTRELAIQVAEAFQRYAKNLPGFHVLPVYGGQSMVVQLRQLAR 162
Query: 523 GVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVXVI 702
G HV+VGTPGRV D I R++L+ +++ VLDEADEML GF D + + + A+
Sbjct: 163 GAHVIVGTPGRVMDHIERKSLNLDSLTTLVLDEADEMLRMGFIDDVEWILQHTPAERQTA 222
Query: 703 LLSATMPDDVLEV 741
L SATMPD + V
Sbjct: 223 LFSATMPDAIRRV 235
>UniRef50_Q3AX69 Cluster: DEAD/DEAH box helicase-like; n=15;
Cyanobacteria|Rep: DEAD/DEAH box helicase-like -
Synechococcus sp. (strain CC9902)
Length = 624
Score = 149 bits (361), Expect = 7e-35
Identities = 79/187 (42%), Positives = 111/187 (59%), Gaps = 1/187 (0%)
Frame = +1
Query: 175 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 354
FD E LL+ + G+ PS IQ+ A + GRD++ QAQ+GTGKTA F++ +L++
Sbjct: 73 FDGFGFSEALLKTLADKGYSDPSPIQKAAFPELMLGRDLVGQAQTGTGKTAAFALPLLER 132
Query: 355 IDTSIRECQALILAPTRELAQQIQKVVIALG-DHLNAKCHACIGGTNVREDIRQLESGVH 531
+++ + Q L+LAPTRELA Q+ A H + K A GGT+ R I L GV
Sbjct: 133 LESGQKTPQVLVLAPTRELAMQVADSFKAYAAGHPHLKVLAVYGGTDFRSQISTLRRGVD 192
Query: 532 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVXVILLS 711
VVVGTPGRV D + + L + + VLDEADEML GF D + + + L + V+L S
Sbjct: 193 VVVGTPGRVMDHMRQGTLDTSGLTSLVLDEADEMLRMGFIDDVEWILEQLPKERQVVLFS 252
Query: 712 ATMPDDV 732
ATMP ++
Sbjct: 253 ATMPPEI 259
>UniRef50_O83749 Cluster: ATP-dependent RNA helicase; n=2;
Treponema|Rep: ATP-dependent RNA helicase - Treponema
pallidum
Length = 649
Score = 149 bits (361), Expect = 7e-35
Identities = 73/191 (38%), Positives = 115/191 (60%), Gaps = 1/191 (0%)
Frame = +1
Query: 172 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQG-RDVIAQAQSGTGKTATFSISIL 348
+F+++ L E+ L + GF P+ IQ AI + G ++IA+A++GTGKTA F + ++
Sbjct: 47 SFEELGLNEQSLAAVRLKGFRCPTPIQAAAIPRLLAGDANIIAKARTGTGKTAAFGLPLI 106
Query: 349 QQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGV 528
Q++ + AL+L PTRELA Q+ + +L + H GG ++ E +R LE G
Sbjct: 107 QELGSPCEHPGALVLVPTRELAAQVASELSSLRIQKIPRIHTVYGGVSIAEQLRNLEQGG 166
Query: 529 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVXVILL 708
++VGT GRV D I R +L + ++ F+LDEADEML+ GF + I +F + D V++
Sbjct: 167 EIIVGTTGRVIDHIERGSLELSYLRYFILDEADEMLNMGFVEDIESIFSHANKDARVLMF 226
Query: 709 SATMPDDVLEV 741
SATMP +L +
Sbjct: 227 SATMPRQILSI 237
>UniRef50_A0Z0M4 Cluster: ATP-dependent RNA helicase; n=1; marine
gamma proteobacterium HTCC2080|Rep: ATP-dependent RNA
helicase - marine gamma proteobacterium HTCC2080
Length = 582
Score = 149 bits (361), Expect = 7e-35
Identities = 76/190 (40%), Positives = 111/190 (58%), Gaps = 1/190 (0%)
Frame = +1
Query: 175 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 354
F+ + L + L + + G+E + IQ I ++GRDV+ AQ+GTGKTA F++ IL
Sbjct: 11 FNSLGLPDFLQENLQSLGYETATPIQAGTIPLLLEGRDVVGLAQTGTGKTAAFALPILAN 70
Query: 355 IDTSIRECQALILAPTRELAQQIQKVVIALGDHLNA-KCHACIGGTNVREDIRQLESGVH 531
ID +R QAL+L PTRELAQQ+ + + G + + + GG ++R+ ++ L G H
Sbjct: 71 IDVKVRSPQALVLCPTRELAQQVAEAFRSYGRGMGGLRILSIFGGADMRQQLKSLREGTH 130
Query: 532 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVXVILLS 711
+VV TPGR+ D I RR++ I VLDEADEML GF D + + + V L S
Sbjct: 131 IVVATPGRLLDHIERRSIDLTGINAVVLDEADEMLRMGFIDDVDTILAKTPKERKVALFS 190
Query: 712 ATMPDDVLEV 741
ATMP V ++
Sbjct: 191 ATMPKRVRDI 200
>UniRef50_A7HKQ8 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Fervidobacterium nodosum Rt17-B1|Rep: DEAD/DEAH box
helicase domain protein - Fervidobacterium nodosum
Rt17-B1
Length = 571
Score = 149 bits (360), Expect = 9e-35
Identities = 77/193 (39%), Positives = 116/193 (60%), Gaps = 2/193 (1%)
Frame = +1
Query: 169 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQ-GRDVIAQAQSGTGKTATFSISI 345
E F+D L EE+L I G+EKP+ IQ+ + + +D+IAQAQ+GTGKTA F I +
Sbjct: 18 ERFEDFGLSEEILLAIQKKGYEKPTEIQKIVLPYALSTDKDLIAQAQTGTGKTAAFGIPL 77
Query: 346 LQQIDTSIRE-CQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLES 522
L++ID + +A+I+ PTRELA QI + + +L K GG ++ + + LE
Sbjct: 78 LERIDFKANKFVKAIIVTPTRELALQIFEELKSLKGTKRVKITTLYGGQSLEKQFKDLEK 137
Query: 523 GVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVXVI 702
GV +VVGTPGR+ D + R L + ++ VLDEAD ML GF D + ++ K +
Sbjct: 138 GVDIVVGTPGRIIDHLNRDTLDLSHVEYLVLDEADRMLDMGFLDDVLEIIKRTGENKRTF 197
Query: 703 LLSATMPDDVLEV 741
L SATMP +++++
Sbjct: 198 LFSATMPKEIVDI 210
>UniRef50_Q6MN67 Cluster: ATP-dependent RNA helicase; n=3;
Deltaproteobacteria|Rep: ATP-dependent RNA helicase -
Bdellovibrio bacteriovorus
Length = 505
Score = 148 bits (359), Expect = 1e-34
Identities = 81/187 (43%), Positives = 110/187 (58%), Gaps = 1/187 (0%)
Frame = +1
Query: 175 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 354
F + L ELL + GFE + IQQ +I + G+D+I QA++G+GKTA FS+ IL +
Sbjct: 49 FSTLPLSPELLTVVQELGFETLTPIQQESIPLLLAGKDIIGQAKTGSGKTAAFSLPILNK 108
Query: 355 IDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNVREDIRQLESGVH 531
I+ QALIL PTRELA Q+ + LG L K A GG + RE LE+GV
Sbjct: 109 INLDQPLLQALILCPTRELASQVVTEIRKLGRRLPGLKVLAMTGGQSGREQADALENGVQ 168
Query: 532 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVXVILLS 711
+VVGTPGR+ D + R + + +K VLDEAD+ML GF D+I V + L +L S
Sbjct: 169 IVVGTPGRLADFVGRNRIDLSAVKTVVLDEADKMLDMGFADEIKTVMRDLPGSRQTVLFS 228
Query: 712 ATMPDDV 732
AT P+ +
Sbjct: 229 ATFPESI 235
>UniRef50_UPI0000566899 Cluster: UPI0000566899 related cluster; n=1;
Mus musculus|Rep: UPI0000566899 UniRef100 entry - Mus
musculus
Length = 449
Score = 148 bits (358), Expect = 2e-34
Identities = 73/184 (39%), Positives = 119/184 (64%), Gaps = 1/184 (0%)
Frame = +1
Query: 175 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 354
F+D LK ELL GI+ G+E PS+IQ+ +I + GRD++A+A++GTGK+ + I +L++
Sbjct: 84 FEDYCLKRELLIGIFEMGWE-PSSIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLER 142
Query: 355 IDTSIRECQALILAPTRELAQQIQKVVIALGDHLN-AKCHACIGGTNVREDIRQLESGVH 531
+D QA+++ PTRELA Q+ ++ I + H+ AK A GGTN+R+D+ +L+ H
Sbjct: 143 LDLKKDNIQAMVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRDDVMRLDDTGH 202
Query: 532 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVXVILLS 711
VV+ TPGR+ D+I + + +++ VLDEAD++LS+ F + L + ++L S
Sbjct: 203 VVIATPGRILDLIKKCLEKVDHVQMVVLDEADKLLSQDFVQIMEAFILTLPKNRQILLYS 262
Query: 712 ATMP 723
AT P
Sbjct: 263 ATFP 266
>UniRef50_Q8EZ11 Cluster: ATP-dependent RNA helicase; n=4;
Leptospira|Rep: ATP-dependent RNA helicase - Leptospira
interrogans
Length = 521
Score = 148 bits (358), Expect = 2e-34
Identities = 76/188 (40%), Positives = 110/188 (58%), Gaps = 1/188 (0%)
Frame = +1
Query: 175 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 354
F ++NL E+ I GFE+ S IQ AI ++G+D+I AQ+GTGKTA F+I ++
Sbjct: 11 FSELNLSAEIQNAILEMGFEEASPIQSEAIPVILKGKDIIGHAQTGTGKTAAFAIPTIEL 70
Query: 355 IDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNVREDIRQLESGVH 531
++ + QALIL PTREL Q+ + L + N + GG + +R L
Sbjct: 71 LEVESKHLQALILCPTRELVIQVSEQFRKLIKYKGNFEVVPIYGGQEIERQLRALRKNPQ 130
Query: 532 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVXVILLS 711
+V+ TPGR+ D + R ++H + IK+ VLDEADEML GF++ + + K AD I+ S
Sbjct: 131 IVIATPGRMMDHMRRGSIHLDEIKIVVLDEADEMLDMGFREDMEFILKDTPADRQTIMFS 190
Query: 712 ATMPDDVL 735
ATM DDVL
Sbjct: 191 ATMTDDVL 198
>UniRef50_Q26CN9 Cluster: ATP-dependent RNA helicase; n=1;
Flavobacteria bacterium BBFL7|Rep: ATP-dependent RNA
helicase - Flavobacteria bacterium BBFL7
Length = 644
Score = 147 bits (357), Expect = 2e-34
Identities = 79/194 (40%), Positives = 113/194 (58%), Gaps = 2/194 (1%)
Frame = +1
Query: 166 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQ-GRDVIAQAQSGTGKTATFSIS 342
++ F+ + L + LL G+ GFE P+ IQQ++I ++ D I AQ+GTGKTA F +
Sbjct: 12 LKNFEVLGLSQPLLNGLADMGFENPTEIQQQSIPILLKHDGDFIGLAQTGTGKTAAFGLP 71
Query: 343 ILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNA-KCHACIGGTNVREDIRQLE 519
+L ID + RE QALILAPTRELAQQI + + HL GG N+ IR +
Sbjct: 72 LLDLIDVNSREVQALILAPTRELAQQICGQMEQMSKHLGKLNVVPVFGGANIMNQIRDIR 131
Query: 520 SGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVXV 699
G ++V TPGR+ D++ RR + + +K VLDEADEML+ GFK+ I + +
Sbjct: 132 RGAQIIVATPGRLMDLMKRREVKLDALKYMVLDEADEMLNMGFKEDIDFILSKSDTGRNI 191
Query: 700 ILLSATMPDDVLEV 741
L SATM ++ +
Sbjct: 192 WLFSATMAREIKRI 205
>UniRef50_Q5ZT20 Cluster: ATP-dependent RNA helicase; n=4;
Legionella pneumophila|Rep: ATP-dependent RNA helicase -
Legionella pneumophila subsp. pneumophila (strain
Philadelphia 1 /ATCC 33152 / DSM 7513)
Length = 589
Score = 147 bits (356), Expect = 3e-34
Identities = 81/196 (41%), Positives = 108/196 (55%), Gaps = 1/196 (0%)
Frame = +1
Query: 157 DQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFS 336
+Q + F N L + + F PS IQ + I +QGRD IA AQ+GTGKTA F+
Sbjct: 2 NQEISNFSTFNFSNALNKALEDMKFITPSPIQAQTIPLILQGRDAIALAQTGTGKTAAFA 61
Query: 337 ISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDH-LNAKCHACIGGTNVREDIRQ 513
+ ILQ + I QALILAPTRELA Q+ + L + N GG ++Q
Sbjct: 62 LPILQNLSPEISTTQALILAPTRELAIQVAEQFELLSKYQRNVTIAVLCGGQEYGRQLKQ 121
Query: 514 LESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADV 693
L SG VVVGTPGR+ D I + L N +K F+LDEADEML GF + + + + L
Sbjct: 122 LRSGAQVVVGTPGRILDHIDKGTLLLNNLKTFILDEADEMLRMGFIEDVETILEKLPEKK 181
Query: 694 XVILLSATMPDDVLEV 741
+ L SATMP + ++
Sbjct: 182 QMALFSATMPYRIRQI 197
>UniRef50_Q6F0U0 Cluster: ATP-dependent RNA helicase; n=1;
Mesoplasma florum|Rep: ATP-dependent RNA helicase -
Mesoplasma florum (Acholeplasma florum)
Length = 666
Score = 147 bits (355), Expect = 4e-34
Identities = 74/191 (38%), Positives = 122/191 (63%), Gaps = 1/191 (0%)
Frame = +1
Query: 172 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 351
TF ++ L +++L + F + + IQ RAI ++G+++ ++ +GTGKTA+F + IL+
Sbjct: 2 TFKELQLSDKVLVALEKANFNEATEIQARAIPLFLEGKNIFGKSSTGTGKTASFVLPILE 61
Query: 352 QIDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNVREDIRQLESGV 528
+I+ + R QA+I+APTRELA QI + G + N IGG ++R+ I++L+
Sbjct: 62 KIEPNKRRVQAVIMAPTRELAMQIVNQIRIFGSRIENLVIAPLIGGADMRDQIKRLKDS- 120
Query: 529 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVXVILL 708
+VVGTPGRV D + R+ L + ++ +LDEADEML GFK++I +F+ +S DV + L
Sbjct: 121 QIVVGTPGRVNDHLNRKTLKLDDVRTIILDEADEMLKMGFKNEIDALFERVSPDVQIGLF 180
Query: 709 SATMPDDVLEV 741
SAT V+++
Sbjct: 181 SATTSPKVMQI 191
>UniRef50_A5BYF4 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 377
Score = 147 bits (355), Expect = 4e-34
Identities = 65/108 (60%), Positives = 88/108 (81%)
Frame = +1
Query: 148 TDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTA 327
T+ +++ +FD M +K +LLRGIYAY FEKPSA+QQRA++P IQG DVIAQAQSGTGKT+
Sbjct: 269 TEGVELIMSFDQMGIKNDLLRGIYAYSFEKPSAVQQRAVLPIIQGHDVIAQAQSGTGKTS 328
Query: 328 TFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCH 471
F++++ Q +DTS RE QALI +PTRELA Q +KV++A+GD +N + H
Sbjct: 329 MFALTVYQMVDTSNREVQALISSPTRELASQTEKVILAIGDSVNIQAH 376
>UniRef50_Q7VFA9 Cluster: ATP-dependent RNA helicase DeaD; n=6;
Helicobacteraceae|Rep: ATP-dependent RNA helicase DeaD -
Helicobacter hepaticus
Length = 530
Score = 146 bits (354), Expect = 5e-34
Identities = 80/211 (37%), Positives = 121/211 (57%)
Frame = +1
Query: 100 QGSYDGPPGMDPGTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQ 279
Q S + P L + Q + FD LK+ +L+GI GF PS +Q ++I +Q
Sbjct: 22 QQSEESPSVTIKQGLKSKHKQDTQGFDVFGLKDFVLKGIREAGFSTPSPVQSQSIPIILQ 81
Query: 280 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLN 459
G+D+IAQAQ+GTGKTA F+I IL ++ + ++ +ALI+ PTRELA QI + ++ LG
Sbjct: 82 GKDLIAQAQTGTGKTAAFAIPILNTLNRN-KDIEALIITPTRELAMQISEEILKLGRFGR 140
Query: 460 AKCHACIGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLS 639
K GG +++ LE ++ TPGR+ D + + + ++ VLDE+DEML
Sbjct: 141 IKTICMYGGQSIKRQCDLLEKKPKAMIATPGRLLDHLQNGRIAHFSPQIVVLDESDEMLD 200
Query: 640 RGFKDQIHDVFKMLSADVXVILLSATMPDDV 732
GF D I ++FK L +L SATMP+ +
Sbjct: 201 MGFLDDIEEIFKFLPNTRQTLLFSATMPEPI 231
>UniRef50_P0A9P8 Cluster: Cold-shock DEAD box protein A; n=54;
Gammaproteobacteria|Rep: Cold-shock DEAD box protein A -
Shigella flexneri
Length = 629
Score = 146 bits (354), Expect = 5e-34
Identities = 75/191 (39%), Positives = 106/191 (55%), Gaps = 1/191 (0%)
Frame = +1
Query: 172 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 351
TF D+ LK +L + G+EKPS IQ I + GRDV+ AQ+G+GKTA FS+ +LQ
Sbjct: 7 TFADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAFSLPLLQ 66
Query: 352 QIDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNVREDIRQLESGV 528
+D ++ Q L+LAPTRELA Q+ + + H+ A GG +R L G
Sbjct: 67 NLDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLRALRQGP 126
Query: 529 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVXVILL 708
+VVGTPGR+ D + R L + + VLDEADEML GF + + + + L
Sbjct: 127 QIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLRMGFIEDVETIMAQIPEGHQTALF 186
Query: 709 SATMPDDVLEV 741
SATMP+ + +
Sbjct: 187 SATMPEAIRRI 197
>UniRef50_P44586 Cluster: Cold-shock DEAD box protein A homolog;
n=20; Pasteurellaceae|Rep: Cold-shock DEAD box protein A
homolog - Haemophilus influenzae
Length = 613
Score = 146 bits (354), Expect = 5e-34
Identities = 78/191 (40%), Positives = 108/191 (56%), Gaps = 1/191 (0%)
Frame = +1
Query: 172 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 351
TF+D+ L E +L+ + GFE PS IQQ I + G DV+ AQ+G+GKTA F++ +L
Sbjct: 6 TFNDLGLPEFILKAVSDLGFETPSPIQQSCIPHLLNGNDVLGMAQTGSGKTAAFALPLLA 65
Query: 352 QIDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNVREDIRQLESGV 528
QID S + Q L++APTRELA Q+ + + GG +R L+ G
Sbjct: 66 QIDPSEKHPQMLVMAPTRELAIQVADACELFVKYAQGTRIVTLYGGQRYDIQLRALKQGA 125
Query: 529 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVXVILL 708
VVVGTPGR+ D I R L+ + ++ VLDEADEML GF D + V L + L
Sbjct: 126 QVVVGTPGRILDHIRRGTLNLSELRFIVLDEADEMLRMGFIDDVETVMAELPENHQTALF 185
Query: 709 SATMPDDVLEV 741
SATMP+ + +
Sbjct: 186 SATMPEPIRRI 196
>UniRef50_Q11QF9 Cluster: Inducible ATP-independent RNA helicase;
n=1; Cytophaga hutchinsonii ATCC 33406|Rep: Inducible
ATP-independent RNA helicase - Cytophaga hutchinsonii
(strain ATCC 33406 / NCIMB 9469)
Length = 457
Score = 146 bits (353), Expect = 7e-34
Identities = 71/189 (37%), Positives = 114/189 (60%), Gaps = 2/189 (1%)
Frame = +1
Query: 172 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQG-RDVIAQAQSGTGKTATFSISIL 348
TF D+ L LL+ + PS IQQ+AI + ++V+ AQ+GTGKTA F + +L
Sbjct: 2 TFSDLGLNAALLQSLSENNISSPSEIQQKAIPVILNSTKNVVGVAQTGTGKTAAFGLPVL 61
Query: 349 QQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNVREDIRQLESG 525
QQI+ S+++ Q L+L PTREL QQ+ K + ++ A GG + E I++LE+
Sbjct: 62 QQINPSLQQTQVLVLVPTRELGQQVAKDLFVFSRYIVRIHTEAVYGGKKIEEQIKKLETP 121
Query: 526 VHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVXVIL 705
H++V TPGR+ D+I R+A++ + +K +LDEADEML+ GF I + K+ +L
Sbjct: 122 KHILVATPGRLLDLIARKAVNLSNLKYLILDEADEMLNMGFLPDIDKIMKIAKPTARKLL 181
Query: 706 LSATMPDDV 732
++T+ ++
Sbjct: 182 FTSTLGSEL 190
>UniRef50_A7JLA3 Cluster: ATP-dependent RNA helicase; n=20;
Francisella|Rep: ATP-dependent RNA helicase -
Francisella tularensis subsp. novicida GA99-3548
Length = 569
Score = 146 bits (353), Expect = 7e-34
Identities = 79/192 (41%), Positives = 115/192 (59%), Gaps = 3/192 (1%)
Frame = +1
Query: 175 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 354
F + L ++++ + G+E P+ IQQ AI + GRDV+ QAQ+GTGKTA F++ ++
Sbjct: 9 FSQLGLNQDIVDTVIKLGYENPTPIQQYAIPYILSGRDVLGQAQTGTGKTAAFALPLINN 68
Query: 355 IDTSIREC--QALILAPTRELAQQIQKVVIALGDHLNAKCHACI-GGTNVREDIRQLESG 525
+D + R+ Q L+LAPTRELA Q+ + A ++ ACI GG IR L+ G
Sbjct: 69 MDLASRDRAPQVLVLAPTRELAIQVAEQFEAFAKNVPNLDVACIYGGQEYGSQIRALKQG 128
Query: 526 VHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVXVIL 705
V VVVGT GRV D I + L + ++ VLDEADEML GF D + V +S + +L
Sbjct: 129 VKVVVGTTGRVMDHIEKGTLQLDNLRALVLDEADEMLRMGFIDDVKFVLSHVSDECQRLL 188
Query: 706 LSATMPDDVLEV 741
SAT+P D+ ++
Sbjct: 189 FSATIPTDIADI 200
>UniRef50_Q893G8 Cluster: ATP-dependent RNA helicase; n=4;
Clostridiales|Rep: ATP-dependent RNA helicase -
Clostridium tetani
Length = 386
Score = 145 bits (352), Expect = 9e-34
Identities = 74/195 (37%), Positives = 117/195 (60%), Gaps = 2/195 (1%)
Frame = +1
Query: 163 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSIS 342
++E+FD + L + L+ G+ G KP+ IQ + I ++ +DVI Q+ +G+GKT + +
Sbjct: 1 MIESFDKLGLNQNLIEGLKQEGINKPTDIQIKTIPLALENKDVIGQSPTGSGKTLAYLLP 60
Query: 343 ILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDH--LNAKCHACIGGTNVREDIRQL 516
I Q+IDTS RE QA+ILAPT ELA QI K + L + ++ IG NV+ I +L
Sbjct: 61 IFQKIDTSKREMQAIILAPTHELAMQINKEIQLLSGNSKVSVTSTPIIGNANVKRQIEKL 120
Query: 517 ESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVX 696
+ HV+VG+ GR+ ++I ++ + A+TIK V+DE D++L I DV K D
Sbjct: 121 KEKPHVIVGSSGRILELIKKKKISAHTIKTIVVDEGDKLLDHSNLSSIKDVIKTTMRDRQ 180
Query: 697 VILLSATMPDDVLEV 741
+++ SAT+ + L V
Sbjct: 181 LMVFSATINEKTLNV 195
>UniRef50_Q0RTL3 Cluster: Cold-shock DeaD box ATP-dependent RNA
helicase; n=2; Bacteria|Rep: Cold-shock DeaD box
ATP-dependent RNA helicase - Frankia alni (strain
ACN14a)
Length = 608
Score = 145 bits (352), Expect = 9e-34
Identities = 78/196 (39%), Positives = 112/196 (57%), Gaps = 3/196 (1%)
Frame = +1
Query: 145 DTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKT 324
D D + V F ++ L+ ELLR + A G+E+P+ IQ+ A+ P + GRD++ QA +GTGKT
Sbjct: 49 DIDPAEDVAGFAELALRPELLRSLAALGYEEPTPIQREAVPPLVAGRDLLGQAATGTGKT 108
Query: 325 ATFSISILQQID---TSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNV 495
A F++ +L ++ T QAL+L PTRELA Q+ + + G L A+ GG +
Sbjct: 109 AAFALPLLHRLTDDRTGDHGPQALVLVPTRELAVQVSEAIHRYGRDLGARVLPVYGGAPI 168
Query: 496 REDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFK 675
+R L GV VVV TPGR D + R L + + VLDEADEML GF + I + +
Sbjct: 169 GRQVRALVQGVDVVVATPGRALDHMGRGTLRLDGLHTVVLDEADEMLDMGFAEDIDAILE 228
Query: 676 MLSADVXVILLSATMP 723
+L SAT+P
Sbjct: 229 QAPQKRQTVLFSATLP 244
>UniRef50_Q0AVQ9 Cluster: ATP-dependent RNA helicase; n=1;
Syntrophomonas wolfei subsp. wolfei str. Goettingen|Rep:
ATP-dependent RNA helicase - Syntrophomonas wolfei
subsp. wolfei (strain Goettingen)
Length = 530
Score = 145 bits (351), Expect = 1e-33
Identities = 77/191 (40%), Positives = 111/191 (58%)
Frame = +1
Query: 169 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISIL 348
E F M LK +LL+ I GFEKP+ IQ ++I + G D++ QAQ+GTGKTA+F I IL
Sbjct: 4 ENFYSMGLKTDLLQMIDEKGFEKPTPIQVKSIPIAMAGLDLMGQAQTGTGKTASFGIPIL 63
Query: 349 QQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGV 528
++ QAL+L PTRELA Q+ + + +L + + A GG ++ +R L
Sbjct: 64 NRVIKG-EGLQALVLCPTRELAVQVTEEISSLSRRMRIQVLAIYGGQSIELQLRSLRRNP 122
Query: 529 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVXVILL 708
++VGTPGR+ D + R + + +K VLDEADEML GF I + + L
Sbjct: 123 EIIVGTPGRLMDHMNRGTISLSPLKYVVLDEADEMLDMGFLPDIQKILSQCPRERQTFLF 182
Query: 709 SATMPDDVLEV 741
SAT+PD+V E+
Sbjct: 183 SATLPDEVREL 193
>UniRef50_A5CVQ6 Cluster: ATP-dependent RNA helicase DeaD; n=2;
sulfur-oxidizing symbionts|Rep: ATP-dependent RNA
helicase DeaD - Vesicomyosocius okutanii subsp.
Calyptogena okutanii (strain HA)
Length = 608
Score = 144 bits (350), Expect = 2e-33
Identities = 76/190 (40%), Positives = 112/190 (58%), Gaps = 1/190 (0%)
Frame = +1
Query: 175 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 354
F+ + L +L + + G+E PS IQ++ I + +D+I QAQ+GTGKTA F + +L +
Sbjct: 14 FERLGLSNTILNVLDSIGYETPSPIQEQCITHLLNNKDIIGQAQTGTGKTAAFVLPLLDK 73
Query: 355 IDTSIRECQALILAPTRELAQQIQKVVIALGDHLNA-KCHACIGGTNVREDIRQLESGVH 531
I+ +I Q LILAPTRELA Q+ + V + GG + +R L+ GVH
Sbjct: 74 INLNINAPQLLILAPTRELAIQVSEAVQTYARGMKGFHVLPIYGGQSYDIQLRPLKRGVH 133
Query: 532 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVXVILLS 711
+VGTPGRV D I ++ L + +K FVLDEADEML GF D I + + + + L S
Sbjct: 134 AIVGTPGRVMDHIEKKTLKLDNLKSFVLDEADEMLKMGFIDDIKWIMQRIPEQRQIALFS 193
Query: 712 ATMPDDVLEV 741
ATMP+ + ++
Sbjct: 194 ATMPNVIKKI 203
>UniRef50_A4BET4 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Reinekea sp. MED297|Rep: DEAD/DEAH box helicase-like
protein - Reinekea sp. MED297
Length = 579
Score = 144 bits (350), Expect = 2e-33
Identities = 78/191 (40%), Positives = 111/191 (58%), Gaps = 1/191 (0%)
Frame = +1
Query: 172 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 351
TF D+ L LL+ + + G+E P+ IQ +AI+ + G DV+ AQ+GTGKTA FS+ +L
Sbjct: 6 TFADLGLAPVLLKTLDSLGYETPTPIQSQAIVQLLDGNDVLGLAQTGTGKTAAFSLPLLS 65
Query: 352 QIDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNVREDIRQLESGV 528
+IDT+ + QAL+L PTRELA Q+ + + N GG ++R +R L+
Sbjct: 66 RIDTTKNKPQALVLCPTRELAIQVAEAFQTYARGVDNFHVLPIYGGADMRNQLRALKQNP 125
Query: 529 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVXVILL 708
V+VGTPGRV D + R L + +K VLDEADEML GF + I + + D L
Sbjct: 126 QVIVGTPGRVMDHLRRGTLDLSDLKHLVLDEADEMLRMGFIEDIDWILEHTPKDKQTALF 185
Query: 709 SATMPDDVLEV 741
SATMP + +
Sbjct: 186 SATMPHQIKRI 196
>UniRef50_A6T3R2 Cluster: ATP-dependent RNA helicase; n=52; cellular
organisms|Rep: ATP-dependent RNA helicase -
Janthinobacterium sp. (strain Marseille) (Minibacterium
massiliensis)
Length = 778
Score = 144 bits (349), Expect = 2e-33
Identities = 80/190 (42%), Positives = 106/190 (55%), Gaps = 1/190 (0%)
Frame = +1
Query: 175 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 354
F D+ L E LLR + G+E PS IQ I + RDV+ QAQ+GTGKTA+F++ IL +
Sbjct: 9 FADLKLSEPLLRVLQELGYESPSPIQAATIPLLLNNRDVLGQAQTGTGKTASFALPILAR 68
Query: 355 IDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNVREDIRQLESGVH 531
ID QAL+LAPTRELA Q+ + ++ GG + + L GVH
Sbjct: 69 IDIKQTTPQALVLAPTRELAIQVAEAFQRYATYIPGFHVLPIYGGQSYGAQLSALRRGVH 128
Query: 532 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVXVILLS 711
VVVGTPGRV D + + +L + IK VLDEADEML GF D + + + L S
Sbjct: 129 VVVGTPGRVIDHLEKGSLDLSRIKTMVLDEADEMLRMGFIDDVETILQKTPESRQTALFS 188
Query: 712 ATMPDDVLEV 741
ATMP + +
Sbjct: 189 ATMPSAIKRI 198
>UniRef50_Q185X0 Cluster: ATP-dependent RNA helicase; n=3;
Clostridium difficile|Rep: ATP-dependent RNA helicase -
Clostridium difficile (strain 630)
Length = 497
Score = 144 bits (348), Expect = 3e-33
Identities = 63/187 (33%), Positives = 117/187 (62%)
Frame = +1
Query: 172 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 351
TF+ L E++L+ + + G+ PS +Q+ I ++G++++ ++++G+GKTA+F+I + +
Sbjct: 4 TFEKFKLNEKILKSLKSLGYNIPSRVQREVIPKLLKGQNLVVRSKTGSGKTASFAIPLCE 63
Query: 352 QIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVH 531
I+ QALI+ PTRELA Q++ + +G +C A G ++++ I +L+ VH
Sbjct: 64 NINVDYNNIQALIVVPTRELALQVKDEISDIGRLKKVRCSAIFGKQSIKDQIAELKQRVH 123
Query: 532 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVXVILLS 711
+VV TPGR+ D I R ++ +K V+DEAD+M ++GF +Q+ + L + V L S
Sbjct: 124 IVVATPGRILDHINRGSIKLENVKYLVIDEADKMFNKGFVEQMEKILLNLPKEKIVSLFS 183
Query: 712 ATMPDDV 732
AT+ +++
Sbjct: 184 ATIDEEI 190
>UniRef50_UPI00015B4D43 Cluster: PREDICTED: hypothetical protein;
n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical
protein - Nasonia vitripennis
Length = 990
Score = 143 bits (347), Expect = 4e-33
Identities = 78/188 (41%), Positives = 115/188 (61%), Gaps = 1/188 (0%)
Frame = +1
Query: 172 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 351
TF M L +++L G+ GF KPS IQ ++I G D+I +A+SGTGKTA F I L+
Sbjct: 25 TFSQMGLSQQVLNGLLNCGFHKPSPIQHKSIPLGRCGFDLIVRAKSGTGKTAVFGIIALE 84
Query: 352 QIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNA-KCHACIGGTNVREDIRQLESGV 528
ID I Q +ILAPTRE+A QI++V+ +LG + K + IGG + D ++L S
Sbjct: 85 MIDIKISSVQVIILAPTREIAIQIKEVIASLGCEIKGLKVESFIGGVAMDIDRKKL-SNC 143
Query: 529 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVXVILL 708
H+ +G PGRV +I + L + ++LFVLDEAD+++ F+ I+ ++ L + VI
Sbjct: 144 HIAIGAPGRVKHLIDKGYLKMDHVRLFVLDEADKLMEESFQKDINYIYAKLPPNRQVISS 203
Query: 709 SATMPDDV 732
SAT P D+
Sbjct: 204 SATYPGDL 211
>UniRef50_Q9PGP6 Cluster: ATP-dependent RNA helicase; n=10; cellular
organisms|Rep: ATP-dependent RNA helicase - Xylella
fastidiosa
Length = 614
Score = 143 bits (347), Expect = 4e-33
Identities = 75/190 (39%), Positives = 111/190 (58%), Gaps = 1/190 (0%)
Frame = +1
Query: 175 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 354
F D+ L + +++ + G+E PS IQ I + GRDV+ QAQ+GTGKTA F++ +L +
Sbjct: 17 FADLGLSDAVMQAVTKIGYETPSPIQAATIPALLAGRDVLGQAQTGTGKTAAFALPLLTR 76
Query: 355 IDTSIRECQALILAPTRELAQQIQKVVIALGDHLNA-KCHACIGGTNVREDIRQLESGVH 531
+ + Q L+LAPTRELA Q+ + ++ + GG + + + L+ GVH
Sbjct: 77 TVLNQVKPQVLVLAPTRELAIQVAEAFQRYAASISGFRVLPVYGGQSYGQQLAALKRGVH 136
Query: 532 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVXVILLS 711
V+VGTPGRV D + R L + +K VLDEADEML GF + + +V + L A V L S
Sbjct: 137 VIVGTPGRVIDHLERGTLDLSELKTLVLDEADEMLRMGFIEDVEEVLRKLPASRQVALFS 196
Query: 712 ATMPDDVLEV 741
ATMP + +
Sbjct: 197 ATMPPQIRRI 206
>UniRef50_Q8A2K2 Cluster: ATP-dependent RNA helicase; n=10; cellular
organisms|Rep: ATP-dependent RNA helicase - Bacteroides
thetaiotaomicron
Length = 647
Score = 143 bits (347), Expect = 4e-33
Identities = 72/194 (37%), Positives = 117/194 (60%), Gaps = 2/194 (1%)
Frame = +1
Query: 166 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCI-QGRDVIAQAQSGTGKTATFSIS 342
++TF+++ + E+ + I G+E P +Q+ I + + DV+A AQ+GTGKTA F +
Sbjct: 1 MKTFEELGVSPEIRKAIEEMGYENPMPVQEEVIPYLLGENNDVVALAQTGTGKTAAFGLP 60
Query: 343 ILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNA-KCHACIGGTNVREDIRQLE 519
+LQQID R Q+LIL PTREL QI + +++ K GG+++ IR L+
Sbjct: 61 LLQQIDVKNRVPQSLILCPTRELCLQIAGDLNDYSKYIDGLKVLPVYGGSSIDSQIRSLK 120
Query: 520 SGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVXV 699
GVH++V TPGR+ D++ R+ + +T+ V+DEADEML+ GF D I+ + + +
Sbjct: 121 RGVHIIVATPGRLLDLMERKTVSLSTVHNIVMDEADEMLNMGFTDSINAILADVPKERNT 180
Query: 700 ILLSATMPDDVLEV 741
+L SATM ++ +
Sbjct: 181 LLFSATMSPEIARI 194
>UniRef50_A2U1Q9 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family protein; n=4; Flavobacteriaceae|Rep:
ATP-dependent RNA helicase, DEAD/DEAH box family protein
- Polaribacter dokdonensis MED152
Length = 373
Score = 143 bits (347), Expect = 4e-33
Identities = 74/196 (37%), Positives = 117/196 (59%), Gaps = 4/196 (2%)
Frame = +1
Query: 166 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQG-RDVIAQAQSGTGKTATFSIS 342
+ TF + ++++ ++ I G KP+ IQ++AI ++ D I AQ+GTGKTA F +
Sbjct: 1 MSTFAGLGIRKDYIKSIKEIGITKPTDIQEKAIPVLLKSPTDFIGLAQTGTGKTAAFGLP 60
Query: 343 ILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKC--HACIGGTNVREDIRQL 516
+L ID + QALIL+PTREL QQI+K + +++ + A GG + + L
Sbjct: 61 VLHHIDANSDHIQALILSPTRELVQQIKKQLFKFTKYVDDRIFLEAVFGGEKIDRQMNNL 120
Query: 517 ESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLS-ADV 693
+ H+V+ TPGR+ D+I R A+ + +K +LDEADEMLS GFK ++ + K + +D
Sbjct: 121 KRTTHIVIATPGRLIDLIERGAVDISHVKTVILDEADEMLSMGFKQDLNRILKFTTKSDR 180
Query: 694 XVILLSATMPDDVLEV 741
L SATMPD++ +
Sbjct: 181 KTWLFSATMPDEIKRI 196
>UniRef50_Q64VR8 Cluster: ATP-dependent RNA helicase DeaD; n=14;
Bacteria|Rep: ATP-dependent RNA helicase DeaD -
Bacteroides fragilis
Length = 427
Score = 143 bits (346), Expect = 5e-33
Identities = 76/189 (40%), Positives = 116/189 (61%), Gaps = 2/189 (1%)
Frame = +1
Query: 172 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 351
TF+++NL E +L+ + G+ P+ IQ+++I +QG+D++ AQ+GTGKTA FSI ILQ
Sbjct: 2 TFENLNLIEPILKALRQEGYTSPTPIQEQSIPILLQGKDLLGCAQTGTGKTAAFSIPILQ 61
Query: 352 QI-DTSIRE-CQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESG 525
++ T R+ +AL+L PTRELA QI + A G + K GG + L SG
Sbjct: 62 KLYKTDHRKGIKALVLTPTRELAIQIGESFEAYGRYTGLKHAVIFGGVGQKPQTDALRSG 121
Query: 526 VHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVXVIL 705
+ ++V TPGR+ D+I++ + +++ FVLDEAD ML GF I + K+L A +
Sbjct: 122 IQILVATPGRLLDLISQGFISLSSLDFFVLDEADRMLDMGFIHDIKRILKLLPARRQTLF 181
Query: 706 LSATMPDDV 732
SATMP ++
Sbjct: 182 FSATMPPEI 190
>UniRef50_A6H0L1 Cluster: Probable ATP-dependent RNA helicase,
DEAD/DEAH box family; n=1; Flavobacterium psychrophilum
JIP02/86|Rep: Probable ATP-dependent RNA helicase,
DEAD/DEAH box family - Flavobacterium psychrophilum
(strain JIP02/86 / ATCC 49511)
Length = 644
Score = 143 bits (346), Expect = 5e-33
Identities = 76/191 (39%), Positives = 111/191 (58%), Gaps = 2/191 (1%)
Frame = +1
Query: 175 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGR-DVIAQAQSGTGKTATFSISILQ 351
F+ + L E LLR I GFE P+ +Q++AI ++ D++A AQ+GTGKTA F ++Q
Sbjct: 4 FEQLGLTESLLRAIIDLGFENPTEVQEKAIPMLLEKDIDLVALAQTGTGKTAAFGFPVIQ 63
Query: 352 QIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNA-KCHACIGGTNVREDIRQLESGV 528
+ID + R QALIL+PTREL QI + + A GG ++ E R ++ G
Sbjct: 64 KIDANNRNTQALILSPTRELCLQITNELKNYSKYEKGINVVAVYGGASITEQARDIKRGA 123
Query: 529 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVXVILL 708
++V TPGR+ DMI RR + + I +LDEADEML+ GF + I ++ + L
Sbjct: 124 QIIVATPGRMQDMINRRLVDISQINYCILDEADEMLNMGFYEDIVNILSTTPDEKNTWLF 183
Query: 709 SATMPDDVLEV 741
SATMP +V +
Sbjct: 184 SATMPAEVARI 194
>UniRef50_P25888 Cluster: Putative ATP-dependent RNA helicase rhlE;
n=122; cellular organisms|Rep: Putative ATP-dependent
RNA helicase rhlE - Escherichia coli (strain K12)
Length = 454
Score = 142 bits (345), Expect = 6e-33
Identities = 77/193 (39%), Positives = 114/193 (59%), Gaps = 6/193 (3%)
Frame = +1
Query: 172 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 351
+FD + L ++LR + G+ +P+ IQQ+AI ++GRD++A AQ+GTGKTA F++ +LQ
Sbjct: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61
Query: 352 QIDT------SIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQ 513
+ T R +ALIL PTRELA QI + V +LN + GG ++ + +
Sbjct: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMK 121
Query: 514 LESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADV 693
L GV V+V TPGR+ D+ + A+ + +++ VLDEAD ML GF I V L A
Sbjct: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181
Query: 694 XVILLSATMPDDV 732
+L SAT DD+
Sbjct: 182 QNLLFSATFSDDI 194
>UniRef50_Q8R4Z5 Cluster: DEAD-box corepressor DP103 beta; n=5;
Tetrapoda|Rep: DEAD-box corepressor DP103 beta - Mus
musculus (Mouse)
Length = 505
Score = 142 bits (344), Expect = 8e-33
Identities = 77/186 (41%), Positives = 115/186 (61%), Gaps = 2/186 (1%)
Frame = +1
Query: 175 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 354
F+ + L +L G+ A GFE+PS +Q +AI G D+I QA+SGTGKT FS L
Sbjct: 65 FESLLLSRPVLEGLRAAGFERPSPVQLKAIPLGRCGLDLIVQAKSGTGKTCVFSTIALDS 124
Query: 355 IDTSIRECQALILAPTRELAQQIQKVVIALGDHLNA-KCHACIGGTNVREDIRQLESGVH 531
+ Q LILAPTRE+A QI V+ A+G + +CH IGGT + +D +L+ H
Sbjct: 125 LILENYSTQILILAPTREIAVQIHSVITAIGIKMEGLECHVFIGGTPLSQDKTRLKK-CH 183
Query: 532 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRG-FKDQIHDVFKMLSADVXVILL 708
+ VG+PGR+ +I L+ +I+LF+LDEAD++L G F++QI+ ++ L A ++ +
Sbjct: 184 IAVGSPGRIKQLIELDYLNPGSIRLFILDEADKLLEEGSFQEQINWIYSSLPASKQMLAV 243
Query: 709 SATMPD 726
SAT P+
Sbjct: 244 SATYPE 249
>UniRef50_A3ZWP8 Cluster: ATP-dependent RNA helicase; n=1;
Blastopirellula marina DSM 3645|Rep: ATP-dependent RNA
helicase - Blastopirellula marina DSM 3645
Length = 428
Score = 142 bits (344), Expect = 8e-33
Identities = 76/188 (40%), Positives = 111/188 (59%), Gaps = 2/188 (1%)
Frame = +1
Query: 175 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 354
+ DM L E+ + A + +PS IQ I ++GRDV+ QA++GTGKTA F I I+++
Sbjct: 6 YADMALSVEMKAALEAARYIQPSPIQAAIIPLALEGRDVLGQARTGTGKTAAFGIPIIER 65
Query: 355 ID--TSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGV 528
++ + R QALIL PTRELA Q++ + L A GG +R + +L+
Sbjct: 66 LEHGPNSRNPQALILTPTRELAVQVRDEIAKLTHGQRINVVAVYGGKPLRSQMEKLKRAP 125
Query: 529 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVXVILL 708
H+VVGTPGRV D++TRRAL ++ VLDEAD ML GF+ I + + + +LL
Sbjct: 126 HIVVGTPGRVIDLMTRRALQLEMLRTVVLDEADRMLDIGFRPDIEKILRRCPEERQTLLL 185
Query: 709 SATMPDDV 732
SAT+P +
Sbjct: 186 SATVPPTI 193
>UniRef50_A3WD13 Cluster: DNA and RNA helicase; n=2;
Alphaproteobacteria|Rep: DNA and RNA helicase -
Erythrobacter sp. NAP1
Length = 484
Score = 142 bits (344), Expect = 8e-33
Identities = 71/194 (36%), Positives = 117/194 (60%), Gaps = 5/194 (2%)
Frame = +1
Query: 175 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATF---SISI 345
F D+ L + +L+ + G+ P+ IQ++AI P ++GRD++ AQ+GTGKTA F SI
Sbjct: 4 FSDLGLSQPVLQALDLKGYSTPTPIQEQAIPPVLEGRDLLGIAQTGTGKTAAFMLPSIDR 63
Query: 346 LQQIDTSI--RECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLE 519
L++ D I + C+ L+LAPTREL QI G K + +GGT+V +D +L
Sbjct: 64 LREADNRIPFKSCRMLVLAPTRELVSQIAASAKDYGALAGLKVQSIVGGTSVNKDRNKLH 123
Query: 520 SGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVXV 699
G +++ TPGR+ D+I ++A + ++++ VLDEAD+ML GF + + +++ +
Sbjct: 124 RGTDILIATPGRLLDLIDQKAFNLGSVEVLVLDEADQMLDLGFVHALRRISQLVPKERQT 183
Query: 700 ILLSATMPDDVLEV 741
+ SATMP + E+
Sbjct: 184 LFFSATMPKAIKEL 197
>UniRef50_Q978T9 Cluster: ATP-dependent RNA helicase; n=3;
Thermoplasma|Rep: ATP-dependent RNA helicase -
Thermoplasma volcanium
Length = 373
Score = 142 bits (344), Expect = 8e-33
Identities = 70/189 (37%), Positives = 112/189 (59%)
Frame = +1
Query: 175 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 354
F++ NL+ EL+ I G+ +P+ +Q AI + G D++ ++++G+GKTA + I I+
Sbjct: 4 FEEFNLRNELIESIRGTGYSEPTEVQSMAIPIALAGSDLVVRSKTGSGKTAAYLIPIINN 63
Query: 355 IDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHV 534
+ +ALIL PTRELA Q+ KV ALG + GG ++ + I + G ++
Sbjct: 64 TAKE-KGIRALILLPTRELAVQVAKVSEALGKRSGIRTVVVYGGVSINKQIELILRGANI 122
Query: 535 VVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVXVILLSA 714
+VGTPGR D+I R L+ + + FVLDEADEML GF + I + +L + L SA
Sbjct: 123 IVGTPGRTLDLIDRGILNFDKVSYFVLDEADEMLDMGFIEDIKKIINVLPVERQSFLFSA 182
Query: 715 TMPDDVLEV 741
T+P +++E+
Sbjct: 183 TIPSEIIEL 191
>UniRef50_Q2FKY7 Cluster: DEAD/DEAH box helicase-like; n=1;
Methanospirillum hungatei JF-1|Rep: DEAD/DEAH box
helicase-like - Methanospirillum hungatei (strain JF-1 /
DSM 864)
Length = 531
Score = 142 bits (344), Expect = 8e-33
Identities = 69/193 (35%), Positives = 109/193 (56%), Gaps = 1/193 (0%)
Frame = +1
Query: 166 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 345
+ +F D+ L +++ I G+E+P+ IQQ I + G DV QA +GTGKTA F I
Sbjct: 3 IPSFSDLQLSPGIIKAIRDIGYEEPTPIQQEVIPLILAGNDVAGQAYTGTGKTAAFGIPA 62
Query: 346 LQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNA-KCHACIGGTNVREDIRQLES 522
++ + R Q ++L P+RELA Q+ + L H GG + I+ L
Sbjct: 63 IELCQPANRNVQTIVLCPSRELAVQVGTELNKLAMHKKGISILPVYGGQPIERQIKALSR 122
Query: 523 GVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVXVI 702
GV +++GTPGRV D I R+ L + + L VLDEAD+ML GF++ I ++ + + +
Sbjct: 123 GVQIIIGTPGRVIDHIKRKTLLLDAVSLVVLDEADQMLDMGFREDIEEILSHIPKERQTV 182
Query: 703 LLSATMPDDVLEV 741
+LSAT P ++L++
Sbjct: 183 ILSATFPPEILDI 195
>UniRef50_Q9UHI6 Cluster: Probable ATP-dependent RNA helicase DDX20;
n=24; Eumetazoa|Rep: Probable ATP-dependent RNA helicase
DDX20 - Homo sapiens (Human)
Length = 824
Score = 142 bits (344), Expect = 8e-33
Identities = 77/186 (41%), Positives = 115/186 (61%), Gaps = 2/186 (1%)
Frame = +1
Query: 175 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 354
F+ + L +L G+ A GFE+PS +Q +AI G D+I QA+SGTGKT FS L
Sbjct: 64 FESLLLSRPVLEGLRAAGFERPSPVQLKAIPLGRCGLDLIVQAKSGTGKTCVFSTIALDS 123
Query: 355 IDTSIRECQALILAPTRELAQQIQKVVIALGDHLNA-KCHACIGGTNVREDIRQLESGVH 531
+ Q LILAPTRE+A QI V+ A+G + +CH IGGT + +D +L+ H
Sbjct: 124 LVLENLSTQILILAPTREIAVQIHSVITAIGIKMEGLECHVFIGGTPLSQDKTRLKK-CH 182
Query: 532 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRG-FKDQIHDVFKMLSADVXVILL 708
+ VG+PGR+ +I L+ +I+LF+LDEAD++L G F++QI+ ++ L A ++ +
Sbjct: 183 IAVGSPGRIKQLIELDYLNPGSIRLFILDEADKLLEEGSFQEQINWIYSSLPASKQMLAV 242
Query: 709 SATMPD 726
SAT P+
Sbjct: 243 SATYPE 248
>UniRef50_Q4T821 Cluster: Chromosome undetermined SCAF7914, whole
genome shotgun sequence; n=3; Tetraodontidae|Rep:
Chromosome undetermined SCAF7914, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 502
Score = 141 bits (342), Expect = 1e-32
Identities = 66/150 (44%), Positives = 101/150 (67%), Gaps = 1/150 (0%)
Frame = +1
Query: 175 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 354
F+D LK ELL GI+ G+EKPS IQ+ +I + GRD++A+A++GTGK+ + I +L++
Sbjct: 91 FEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPMLER 150
Query: 355 IDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNVREDIRQLESGVH 531
ID QAL+L PTRELA Q+ ++ I + HL K A GGTN+R+DI +L+ VH
Sbjct: 151 IDLKKDHIQALVLVPTRELALQVSQISIQIAKHLGGVKVMATTGGTNLRDDIMRLDETVH 210
Query: 532 VVVGTPGRVYDMITRRALHANTIKLFVLDE 621
VV+ TPGR+ D++ + + +++ V+DE
Sbjct: 211 VVIATPGRILDLMKKGVAKVDKVQIMVMDE 240
>UniRef50_A4M6V6 Cluster: DEAD/DEAH box helicase domain protein;
n=2; cellular organisms|Rep: DEAD/DEAH box helicase
domain protein - Petrotoga mobilis SJ95
Length = 530
Score = 141 bits (342), Expect = 1e-32
Identities = 71/188 (37%), Positives = 109/188 (57%), Gaps = 1/188 (0%)
Frame = +1
Query: 175 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRD-VIAQAQSGTGKTATFSISILQ 351
F M L + +L I G+E P+ IQ++ I + G++ VI QAQ+GTGKTA F I +++
Sbjct: 4 FQQMGLSDNILSAIDRKGYEAPTPIQEKVIPLLLSGKNNVIGQAQTGTGKTAAFGIPLIE 63
Query: 352 QIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVH 531
++D + QAL+L PTRELA Q+ + +L + GG ++ IR L+ V
Sbjct: 64 RLDEKANDVQALVLTPTRELALQVCNEIDSLKGNKRLNLLPVYGGVSIGNQIRALKRRVD 123
Query: 532 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVXVILLS 711
+VVGTPGR+ D + R L IK V+DEADEML GF + + + + + +++ S
Sbjct: 124 LVVGTPGRIIDHLNRGTLDITKIKYLVIDEADEMLDMGFIEDVEMILSKTNKEKQILMFS 183
Query: 712 ATMPDDVL 735
ATMP ++
Sbjct: 184 ATMPQRIV 191
>UniRef50_P0C218 Cluster: Probable ATP-dependent RNA helicase DDX20;
n=9; Euteleostomi|Rep: Probable ATP-dependent RNA
helicase DDX20 - Danio rerio (Zebrafish) (Brachydanio
rerio)
Length = 761
Score = 141 bits (342), Expect = 1e-32
Identities = 77/193 (39%), Positives = 119/193 (61%), Gaps = 5/193 (2%)
Frame = +1
Query: 175 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 354
F + L + +L G+ A GF++PS IQ +AI G D+I QA+SGTGKT F+ L
Sbjct: 28 FSSLLLSKPVLEGLSASGFQRPSPIQLKAIPLGRCGLDLIVQAKSGTGKTCVFTTIALDS 87
Query: 355 IDTSIRECQALILAPTRELAQQIQKVVIALGDHLNA-KCHACIGGTNVREDIRQLESGVH 531
+ Q L+LAPTRE+A QI VV+A+G + +CH IGG + +D + L+ H
Sbjct: 88 LILENATTQVLVLAPTREIAVQIHAVVMAIGSAMEGLECHVFIGGRPISQDKQHLKK-CH 146
Query: 532 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEML----SRGFKDQIHDVFKMLSADVXV 699
+ +G+PGR+ +I AL ++I+LFVLDEAD++L S F++QI+ ++ L A+ +
Sbjct: 147 IAIGSPGRIKQLIEMGALMVSSIRLFVLDEADKLLEDDSSSSFQEQINWIYSSLPANKQM 206
Query: 700 ILLSATMPDDVLE 738
+ LSAT P+ + +
Sbjct: 207 LALSATYPESLAQ 219
>UniRef50_A5FST0 Cluster: DEAD/DEAH box helicase domain protein;
n=8; Bacteria|Rep: DEAD/DEAH box helicase domain protein
- Dehalococcoides sp. BAV1
Length = 561
Score = 141 bits (341), Expect = 2e-32
Identities = 73/188 (38%), Positives = 112/188 (59%), Gaps = 1/188 (0%)
Frame = +1
Query: 172 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 351
+F+ N ++ G+ A G+++P+ IQ +AI P + G DVI AQ+GTGKTA +++ I+Q
Sbjct: 2 SFESFNFDPAVMAGVRACGYKEPTPIQAQAIPPIMAGHDVIGLAQTGTGKTAAYALPIIQ 61
Query: 352 QIDTSIR-ECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGV 528
++ ++ R + L++APTRELA QI +LG + + GG N+ + IR+L SGV
Sbjct: 62 KMLSTPRGRVRTLVIAPTRELACQISDSFRSLGQRARIRECSIYGGVNMDQQIRRLRSGV 121
Query: 529 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVXVILL 708
VVV PGR+ D I R + ++ ++DEAD M GF+ I + K L +L
Sbjct: 122 DVVVACPGRLLDHIWRGTIDVCGVETLIIDEADRMFDMGFQPDIQSILKCLVQPHQTLLF 181
Query: 709 SATMPDDV 732
SATMP +V
Sbjct: 182 SATMPPEV 189
>UniRef50_Q0W8H7 Cluster: ATP-dependent RNA helicase; n=1;
uncultured methanogenic archaeon RC-I|Rep: ATP-dependent
RNA helicase - Uncultured methanogenic archaeon RC-I
Length = 497
Score = 141 bits (341), Expect = 2e-32
Identities = 69/186 (37%), Positives = 113/186 (60%)
Frame = +1
Query: 175 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 354
F ++NL ++R ++ GFE+ + IQ++AI ++G+D+I QA++GTGKTA F I +++
Sbjct: 4 FTELNLTPSIVRAVHEMGFEEATPIQEQAIPLAMEGKDLIGQARTGTGKTAAFGIPMVEA 63
Query: 355 IDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHV 534
I + + Q L++ PTRELA Q+ + + +G + A GG + R ++ LE H+
Sbjct: 64 IRPTSKGVQGLVVVPTRELAVQVAEELTRIGKVRGIRSVAIYGGQDFRSQVKALEELPHI 123
Query: 535 VVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVXVILLSA 714
VVGTPGR+ + + R + + I++ VLDEAD+ML GF D+ + K L +L SA
Sbjct: 124 VVGTPGRLLEHMRREYVRTSDIRIAVLDEADKMLDMGFIDEAEKILKKLPERRQTLLFSA 183
Query: 715 TMPDDV 732
T+ V
Sbjct: 184 TLSPPV 189
>UniRef50_A0V009 Cluster: DEAD/DEAH box helicase-like; n=1;
Clostridium cellulolyticum H10|Rep: DEAD/DEAH box
helicase-like - Clostridium cellulolyticum H10
Length = 542
Score = 140 bits (340), Expect = 2e-32
Identities = 71/187 (37%), Positives = 106/187 (56%)
Frame = +1
Query: 172 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 351
TF+++ + +L+ I GF+ P+ +Q +AI + D+I +++G+GKTA F +SILQ
Sbjct: 4 TFNELGISAPILKAIDDMGFKTPTEVQSKAIPHILNNEDLIVMSKTGSGKTAVFGVSILQ 63
Query: 352 QIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVH 531
+ Q LIL P RELA Q+ + + +L K A G N+ + + L GV
Sbjct: 64 LTNPEEAGPQGLILTPARELAVQVDNDIRKMAKYLKHKTTAIYGQHNINLETQILNKGVS 123
Query: 532 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVXVILLS 711
+V GTPGRV+D I+ L I+ VLDEAD ML GF DQ+ + K L + +L S
Sbjct: 124 IVTGTPGRVFDHISHGTLSTKNIRFLVLDEADRMLDMGFLDQVVRIVKTLPKERITLLFS 183
Query: 712 ATMPDDV 732
ATMP ++
Sbjct: 184 ATMPPEI 190
>UniRef50_Q3LWE1 Cluster: Translation initiation factor 4A2; n=1;
Bigelowiella natans|Rep: Translation initiation factor
4A2 - Bigelowiella natans (Pedinomonas minutissima)
(Chlorarachnion sp.(strain CCMP 621))
Length = 378
Score = 140 bits (340), Expect = 2e-32
Identities = 71/186 (38%), Positives = 112/186 (60%)
Frame = +1
Query: 166 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 345
V++F D+ LK + +G++ S IQ ++P ++GRD+I Q+ SGTGKT + I
Sbjct: 9 VKSFFDLKLKNSIKKGVFINAMYYCSKIQSITLIPLLKGRDIIYQSPSGTGKTTCYIIGT 68
Query: 346 LQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESG 525
Q+ SI Q LIL PTREL+ QI+ V L + +C GG + ED++ L+
Sbjct: 69 SNQLCQSINSPQCLILVPTRELSIQIRNVFNVLNIYTKNSITSCHGGRWLGEDLKNLKKN 128
Query: 526 VHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVXVIL 705
H +VGTPGRV ++ +L I+ FVLDEAD ++++ FK I ++++ L++ V +I+
Sbjct: 129 FHGIVGTPGRVLHLLQIGSLAITKIRTFVLDEADILMNKNFKIDIFNIYRYLNSKVQIII 188
Query: 706 LSATMP 723
SAT+P
Sbjct: 189 CSATIP 194
>UniRef50_Q14NT1 Cluster: Putative atp-dependent rna helicase
protein; n=1; Spiroplasma citri|Rep: Putative
atp-dependent rna helicase protein - Spiroplasma citri
Length = 443
Score = 140 bits (339), Expect = 3e-32
Identities = 76/190 (40%), Positives = 111/190 (58%), Gaps = 1/190 (0%)
Frame = +1
Query: 175 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 354
F+ +NL L R I G+ + IQ++AI + +D+I ++ +GTGKT F + ILQ
Sbjct: 3 FNTLNLYPALQRMIAKMGYTNLTEIQEKAIPVALNSQDIIGKSHTGTGKTVAFIVPILQN 62
Query: 355 IDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACI-GGTNVREDIRQLESGVH 531
++T +++ QA+IL PT ELA QI + V +L I GG++++ I L +
Sbjct: 63 LNTHLKQPQAIILCPTHELASQIIEQVRKFATYLEGVNATLICGGSHIQRQIYALRKS-N 121
Query: 532 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVXVILLS 711
++VGTPGR+ D I R+ L + IK VLDEADEML GFK + VF+ +L S
Sbjct: 122 IIVGTPGRIADHINRKTLRLDKIKTIVLDEADEMLKMGFKTDLDKVFQNAPNKYQTLLFS 181
Query: 712 ATMPDDVLEV 741
ATMP VLE+
Sbjct: 182 ATMPKQVLEI 191
>UniRef50_Q08Q14 Cluster: HeliCase, c-terminal:dead/deah box
helicase, n-terminal; n=3; Bacteria|Rep: HeliCase,
c-terminal:dead/deah box helicase, n-terminal -
Stigmatella aurantiaca DW4/3-1
Length = 608
Score = 140 bits (339), Expect = 3e-32
Identities = 77/220 (35%), Positives = 117/220 (53%), Gaps = 7/220 (3%)
Frame = +1
Query: 103 GSYDGPPG-MDPGTLDT---DWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMP 270
G D PPG +D T + + TF+ + L L+ + A G+E+P+ IQ+ A+ P
Sbjct: 10 GRCDFPPGGIDGATSPSTVKETSAADNTFESLGLLPPLVEALSALGYEEPTPIQRAALPP 69
Query: 271 CIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRE---CQALILAPTRELAQQIQKVVIA 441
++G+D++ A +GTGKTA FS+ +LQ+I AL+L PTRELA Q+ + +
Sbjct: 70 LLEGKDLLGIAATGTGKTAAFSLPLLQRITPGAHAPFTASALVLVPTRELAMQVAEAIHR 129
Query: 442 LGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDE 621
G L GG + + +R L+ GV VVV TPGR D + R+ L +++ VLDE
Sbjct: 130 YGQKLGISVVPLYGGQVISQQLRVLKRGVDVVVATPGRALDHLQRKTLKLEQVRVVVLDE 189
Query: 622 ADEMLSRGFKDQIHDVFKMLSADVXVILLSATMPDDVLEV 741
ADEML GF + + + L SAT+P + +
Sbjct: 190 ADEMLDMGFAEDLEAILSSTPEKRQTALFSATLPPRIASI 229
>UniRef50_Q01PH0 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Solibacter usitatus Ellin6076|Rep: DEAD/DEAH box
helicase domain protein - Solibacter usitatus (strain
Ellin6076)
Length = 422
Score = 140 bits (339), Expect = 3e-32
Identities = 67/191 (35%), Positives = 110/191 (57%), Gaps = 2/191 (1%)
Frame = +1
Query: 175 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 354
F ++ L +L + F +P+ IQ AI P + G+D++A AQ+GTGKT F + +Q
Sbjct: 4 FSELPLSAQLKSNLAKNNFTEPTPIQSLAIEPALAGKDIVATAQTGTGKTLAFLLPTIQL 63
Query: 355 IDTSIRE--CQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGV 528
+ T R+ +ALIL PTRELA QI + ++ + + +GG N R +R + G
Sbjct: 64 LSTEPRQPGVRALILTPTRELALQINEALLQIARGTGIRAAVAVGGLNERSQLRDIRGGA 123
Query: 529 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVXVILL 708
++VV TPGR+YD ++R ++ T+++ +LDE+D ML GF I + + A+ +L
Sbjct: 124 NIVVATPGRLYDFMSRGLINLTTVRMLILDESDRMLDMGFLPTIKRIIAAMPAERQTLLF 183
Query: 709 SATMPDDVLEV 741
SAT+ V ++
Sbjct: 184 SATLESSVKQL 194
>UniRef50_A7BCL2 Cluster: Putative uncharacterized protein; n=1;
Actinomyces odontolyticus ATCC 17982|Rep: Putative
uncharacterized protein - Actinomyces odontolyticus ATCC
17982
Length = 722
Score = 140 bits (339), Expect = 3e-32
Identities = 82/200 (41%), Positives = 109/200 (54%), Gaps = 1/200 (0%)
Frame = +1
Query: 145 DTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKT 324
+ D D V TF + L EE+L + GF P+ IQ AI P ++ RDV+ AQ+GTGKT
Sbjct: 39 EEDTDTV--TFASLGLPEEILAAVTDMGFRVPTPIQAAAIPPLLELRDVVGIAQTGTGKT 96
Query: 325 ATFSISILQQIDTSIRECQALILAPTRELA-QQIQKVVIALGDHLNAKCHACIGGTNVRE 501
A F + +L +D R QAL+LAPTRELA Q Q + GG+
Sbjct: 97 AAFGLPLLAIVDADERNVQALVLAPTRELAMQSAQAIEDFAARTARLDVVPVYGGSPYGP 156
Query: 502 DIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKML 681
I L+ G VVVGTPGRV D+I + AL + +++ VLDEADEML GF + + +
Sbjct: 157 QIGALKRGAQVVVGTPGRVIDLIEKGALDLSHVRMLVLDEADEMLRMGFAEDVETIASSA 216
Query: 682 SADVXVILLSATMPDDVLEV 741
D L SATMP + +V
Sbjct: 217 PDDRLTALFSATMPAAIEKV 236
>UniRef50_UPI0000D55AB0 Cluster: PREDICTED: similar to Probable
ATP-dependent RNA helicase DDX20 (DEAD box protein 20)
(DEAD box protein DP 103) (Component of gems 3)
(Gemin-3) (Regulator of steroidogenic factor 1)
(ROSF-1); n=1; Tribolium castaneum|Rep: PREDICTED:
similar to Probable ATP-dependent RNA helicase DDX20
(DEAD box protein 20) (DEAD box protein DP 103)
(Component of gems 3) (Gemin-3) (Regulator of
steroidogenic factor 1) (ROSF-1) - Tribolium castaneum
Length = 688
Score = 140 bits (338), Expect = 4e-32
Identities = 76/199 (38%), Positives = 123/199 (61%), Gaps = 1/199 (0%)
Frame = +1
Query: 139 TLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTG 318
T D D+ + +F + L +++ +G+ GF+KPS IQ +AI G D+I +++SGTG
Sbjct: 15 TKDVILDENI-SFASLLLPDDIKQGLSVSGFKKPSPIQFKAIPLGRCGFDLIVKSKSGTG 73
Query: 319 KTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNA-KCHACIGGTNV 495
KT FS L+ ++T+ Q LIL PTRE+A QI+ V+ ++G H+N K + IGG +
Sbjct: 74 KTLVFSTIALETVNTAKDHLQVLILVPTREIAVQIEDVLRSVGCHVNGLKIESFIGGRPL 133
Query: 496 REDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFK 675
+D+++ S H+ VG PGRV ++ AL N +KLFVLDEAD+++ F+ I++++
Sbjct: 134 EDDLKK-SSKCHIAVGAPGRVKHLLKMGALTTNLVKLFVLDEADKLMEESFQSDINEIYN 192
Query: 676 MLSADVXVILLSATMPDDV 732
L +I+ SAT P ++
Sbjct: 193 SLPPRKQMIVSSATYPQEL 211
>UniRef50_Q5GZA1 Cluster: ATP-dependent RNA helicase; n=6;
Xanthomonas|Rep: ATP-dependent RNA helicase -
Xanthomonas oryzae pv. oryzae
Length = 482
Score = 140 bits (338), Expect = 4e-32
Identities = 74/186 (39%), Positives = 109/186 (58%), Gaps = 2/186 (1%)
Frame = +1
Query: 175 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 354
F + L L GI A G+ + +Q +++ P ++G DVIAQA +G+GKTA F + +LQ+
Sbjct: 28 FSALPLSPALAPGIDALGYTVLTPVQAQSLPPILRGLDVIAQAPTGSGKTAAFGLGLLQK 87
Query: 355 IDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNVREDIRQLES-GV 528
+D ++ QAL+L PTRELA Q+ K + L + N K GG + + LE+
Sbjct: 88 LDPALTRAQALVLCPTRELADQVGKQLRKLATGIPNMKLVVLTGGMPLGPQLASLEAHDP 147
Query: 529 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVXVILL 708
HVVVGTPGR+ ++ +RALH ++ VLDEAD ML GF++ I ++ +L
Sbjct: 148 HVVVGTPGRIQELARKRALHLGGVRTLVLDEADRMLDMGFEEPIREIASRCDKHRQSLLF 207
Query: 709 SATMPD 726
SAT PD
Sbjct: 208 SATFPD 213
>UniRef50_Q1IMK6 Cluster: DEAD/DEAH box helicase-like; n=1;
Acidobacteria bacterium Ellin345|Rep: DEAD/DEAH box
helicase-like - Acidobacteria bacterium (strain
Ellin345)
Length = 423
Score = 140 bits (338), Expect = 4e-32
Identities = 77/193 (39%), Positives = 109/193 (56%), Gaps = 1/193 (0%)
Frame = +1
Query: 145 DTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKT 324
D + Q + TF+DM L + L + + A F P+ +Q++AI P + GRD++A AQ+GTGKT
Sbjct: 19 DPERRQRLTTFNDMPLSDVLKQRLEAAQFINPTPVQEKAIPPALDGRDILATAQTGTGKT 78
Query: 325 ATFSISILQQI-DTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVRE 501
F I L+ + DT Q LIL PTRELA Q+ V L +GGT+ R
Sbjct: 79 LAFIIPALEMLRDTEPCGVQVLILVPTRELAMQVHGVYEQLKGKKLKSAALVMGGTSERN 138
Query: 502 DIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKML 681
I+ + SG VVV TPGR+ D + RR + + +++ VLDEAD M+ GF I + + L
Sbjct: 139 QIQSIRSGARVVVATPGRLEDYMGRRLVDLSQVEMLVLDEADRMMDMGFLPAIKRILRAL 198
Query: 682 SADVXVILLSATM 720
D + SATM
Sbjct: 199 PRDKQTLCFSATM 211
>UniRef50_Q5QY63 Cluster: ATP-dependent RNA helicase; n=3;
Alteromonadales|Rep: ATP-dependent RNA helicase -
Idiomarina loihiensis
Length = 594
Score = 139 bits (337), Expect = 6e-32
Identities = 71/188 (37%), Positives = 112/188 (59%), Gaps = 1/188 (0%)
Frame = +1
Query: 172 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 351
+F+DM L +L + A F P+ IQ +AI ++G+DV+ +AQ+GTGKTA F + L
Sbjct: 9 SFNDMALPSAVLEQLNAMQFLTPTPIQLQAIPALLEGQDVLGEAQTGTGKTAAFGLPALA 68
Query: 352 QIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACI-GGTNVREDIRQLESGV 528
+ID S+++ Q L++ PTRELA Q+ + + + A + GG ++ L+ G
Sbjct: 69 KIDASVKQTQVLVVTPTRELAIQVAEALEGFAAKMRGVGVATVYGGAPFGPQVKALKQGT 128
Query: 529 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVXVILL 708
+VVGTPGR+ D++ + L + +K+ VLDEADEML+ GF + I + K + L
Sbjct: 129 AIVVGTPGRLIDLLNKNVLQLDGLKVGVLDEADEMLNMGFIEDIETILKAVPNTAQRALF 188
Query: 709 SATMPDDV 732
SATMP+ +
Sbjct: 189 SATMPNAI 196
>UniRef50_Q4IZ16 Cluster: DEAD/DEAH box helicase:Helicase,
C-terminal:DbpA RNA binding domain; n=18;
Pseudomonadaceae|Rep: DEAD/DEAH box helicase:Helicase,
C-terminal:DbpA RNA binding domain - Azotobacter
vinelandii AvOP
Length = 575
Score = 139 bits (337), Expect = 6e-32
Identities = 76/190 (40%), Positives = 107/190 (56%), Gaps = 1/190 (0%)
Frame = +1
Query: 175 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 354
F + + +L I A G+E+PS IQ +AI + G D+I QAQ+GTGKTA F++ +L +
Sbjct: 25 FAALGIHPAVLAAITAVGYEEPSPIQAQAIPVILAGHDMIGQAQTGTGKTAAFALPMLSR 84
Query: 355 IDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNVREDIRQLESGVH 531
ID + RE Q LILAPTRELA Q+ L A GG + ++ L G
Sbjct: 85 IDPARREPQLLILAPTRELALQVATAFETYASQLPGVGVVAVYGGAPMGPQLKALRQGAQ 144
Query: 532 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVXVILLS 711
++V TPGR+ D + R +T+K VLDEADEML GF + + +F L +L S
Sbjct: 145 ILVATPGRLCDHLRRDEQLLSTVKHLVLDEADEMLKLGFMEDLEVIFAALPESRQTVLFS 204
Query: 712 ATMPDDVLEV 741
AT+P + E+
Sbjct: 205 ATLPHSIREI 214
>UniRef50_Q58083 Cluster: Probable ATP-dependent RNA helicase
MJ0669; n=11; cellular organisms|Rep: Probable
ATP-dependent RNA helicase MJ0669 - Methanococcus
jannaschii
Length = 367
Score = 139 bits (337), Expect = 6e-32
Identities = 71/190 (37%), Positives = 118/190 (62%), Gaps = 1/190 (0%)
Frame = +1
Query: 175 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGR-DVIAQAQSGTGKTATFSISILQ 351
F+++NL + +L I GFEKP+ IQ + I + +++AQA++G+GKTA+F+I +++
Sbjct: 8 FNELNLSDNILNAIRNKGFEKPTDIQMKVIPLFLNDEYNIVAQARTGSGKTASFAIPLIE 67
Query: 352 QIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVH 531
++ + +A+IL PTRELA Q+ + +L + N K GG + I+ L++ +
Sbjct: 68 LVNEN-NGIEAIILTPTRELAIQVADEIESLKGNKNLKIAKIYGGKAIYPQIKALKNA-N 125
Query: 532 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVXVILLS 711
+VVGTPGR+ D I R L+ +K F+LDEADEML+ GF + + + D ++L S
Sbjct: 126 IVVGTPGRILDHINRGTLNLKNVKYFILDEADEMLNMGFIKDVEKILNACNKDKRILLFS 185
Query: 712 ATMPDDVLEV 741
ATMP ++L +
Sbjct: 186 ATMPREILNL 195
>UniRef50_Q4N4B1 Cluster: ATP-dependent RNA helicase, putative; n=4;
Eukaryota|Rep: ATP-dependent RNA helicase, putative -
Theileria parva
Length = 470
Score = 139 bits (336), Expect = 8e-32
Identities = 74/200 (37%), Positives = 115/200 (57%), Gaps = 1/200 (0%)
Frame = +1
Query: 145 DTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKT 324
D D D TF+D+ + EL R G+++P+ IQ AI + G+D+I A++G+GKT
Sbjct: 33 DDDKDDDTPTFEDLGVCVELCRACKELGWKRPTKIQIEAIPIALSGKDIIGLAETGSGKT 92
Query: 325 ATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVRED 504
A F+I ILQ++ + +LILAPTREL+ QI++ +I+LG + +GG ++
Sbjct: 93 AAFTIPILQKLLEKPQRLFSLILAPTRELSLQIKEQLISLGSEIGLDVCLILGGLDMVSQ 152
Query: 505 IRQLESGVHVVVGTPGRVYDMI-TRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKML 681
QL H++VG+PGR+ D + + TIK VLDEAD++LS F D ++ + L
Sbjct: 153 ALQLSKKPHIIVGSPGRIADHLQNTKGFSLETIKYLVLDEADKLLSTDFDDSLNKIITSL 212
Query: 682 SADVXVILLSATMPDDVLEV 741
D L SATM + ++
Sbjct: 213 PKDKVTYLYSATMTSKITKL 232
>UniRef50_Q5KBP5 Cluster: ATP-dependent RNA helicase DBP5; n=3;
Filobasidiella neoformans|Rep: ATP-dependent RNA
helicase DBP5 - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 546
Score = 139 bits (336), Expect = 8e-32
Identities = 77/196 (39%), Positives = 127/196 (64%), Gaps = 5/196 (2%)
Frame = +1
Query: 166 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQG--RDVIAQAQSGTGKTATFSI 339
V++F ++NL E+L++GI A GF+KPS IQ++A+ + R++I Q+QSGTGKTA F++
Sbjct: 147 VQSFKELNLHEDLMKGIIAAGFQKPSKIQEKALPLLLSNPPRNLIGQSQSGTGKTAAFTL 206
Query: 340 SILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLE 519
++L ++D +I QA+ +AP+RELA+QIQ+V+ +G I G+ R +++
Sbjct: 207 NMLSRVDPTIPTPQAICIAPSRELARQIQEVIDQIGQFTQVGTFLAIPGSWSRNS--RID 264
Query: 520 SGVHVVVGTPGRVYDMITR--RALHANTIKLFVLDEADEMLS-RGFKDQIHDVFKMLSAD 690
+++GTPG + DM+ R R L I++ VLDEADE+++ +G +Q + ++L +
Sbjct: 265 K--QILIGTPGTLVDMLMRGSRILDPRMIRVLVLDEADELIAQQGLGEQTFRIKQLLPPN 322
Query: 691 VXVILLSATMPDDVLE 738
V +L SAT DDV E
Sbjct: 323 VQNVLFSATFNDDVQE 338
>UniRef50_Q81JK1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=30; Firmicutes|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Bacillus anthracis
Length = 481
Score = 138 bits (335), Expect = 1e-31
Identities = 68/188 (36%), Positives = 110/188 (58%)
Frame = +1
Query: 169 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISIL 348
++F + L +E+ R + G+E P+ +Q I +Q +D++ ++Q+G+GKTA+F I +
Sbjct: 4 KSFSNYALSKEVRRALTGLGYEHPTEVQGEVIPVALQKKDLVVKSQTGSGKTASFGIPLC 63
Query: 349 QQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGV 528
+ ++ + QAL+L PTRELA Q+++ + +G K A G + +L+
Sbjct: 64 EMVEWEENKPQALVLTPTRELAVQVKEDITNIGRFKRIKAAAIYGKSPFARQKLELKQKT 123
Query: 529 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVXVILL 708
H+VVGTPGRV D I + L +K V+DEADEML+ GF DQ+ + L +L
Sbjct: 124 HIVVGTPGRVLDHIEKGTLSLERLKYLVIDEADEMLNMGFIDQVEAIIDELPTKRMTMLF 183
Query: 709 SATMPDDV 732
SAT+P+DV
Sbjct: 184 SATLPEDV 191
>UniRef50_Q9LKL6 Cluster: DEAD box protein P68; n=5;
Viridiplantae|Rep: DEAD box protein P68 - Pisum sativum
(Garden pea)
Length = 622
Score = 138 bits (335), Expect = 1e-31
Identities = 77/195 (39%), Positives = 117/195 (60%), Gaps = 6/195 (3%)
Frame = +1
Query: 166 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 345
+E+F+DM L +++ I + + +PS+IQ +A+ + GRD++ A++G+GKTA F+I +
Sbjct: 117 IESFNDMCLHPSIMKDIAYHEYTRPSSIQAQAMPIALSGRDLLGCAETGSGKTAAFTIPM 176
Query: 346 LQQ--IDTSIRECQ---ALILAPTRELAQQIQKVVIALGDHLNA-KCHACIGGTNVREDI 507
LQ + IR AL+LAPTRELAQQI+K V A L + K +GGTN+ +
Sbjct: 177 LQHCLVQPPIRRGDGPLALVLAPTRELAQQIEKEVQAFSRSLESLKNCIVVGGTNIEKQR 236
Query: 508 RQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSA 687
+L +GV + V TPGR D + + + I VLDEAD ML GF+ QI ++ + L
Sbjct: 237 SELRAGVEIAVATPGRFIDHLQQGNTSLSRISYVVLDEADRMLDMGFEPQIREIMRSLPE 296
Query: 688 DVXVILLSATMPDDV 732
+L SATMP ++
Sbjct: 297 KHQTLLFSATMPVEI 311
>UniRef50_Q5NML9 Cluster: DNA and RNA helicase; n=28;
Alphaproteobacteria|Rep: DNA and RNA helicase -
Zymomonas mobilis
Length = 458
Score = 138 bits (334), Expect = 1e-31
Identities = 72/195 (36%), Positives = 113/195 (57%), Gaps = 5/195 (2%)
Frame = +1
Query: 172 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 351
+F + L L++ + G+ KP+ IQ +AI ++G+D+ AQ+GTGKTA F++ +
Sbjct: 7 SFKTLGLDSSLVQALDGLGYSKPTPIQAQAIPHLLEGKDLCGIAQTGTGKTAAFALPSIH 66
Query: 352 QIDTSI-----RECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQL 516
+ T+ R C+ LIL+PTRELA QI + HL +A GG + +R L
Sbjct: 67 YLATNPQARPQRGCRMLILSPTRELASQIARACNDYTRHLRMSVNAVFGGVPIGRQMRML 126
Query: 517 ESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVX 696
+ G ++V TPGR+ D+I +RAL +++FVLDEAD+ML GF + + K+L +
Sbjct: 127 DRGTDILVATPGRLLDLIDQRALVLKDVEVFVLDEADQMLDLGFIHALRRIDKLLPKNRQ 186
Query: 697 VILLSATMPDDVLEV 741
+ SATMP + E+
Sbjct: 187 TLFFSATMPKTIQEL 201
>UniRef50_Q31AC4 Cluster: DEAD/DEAH box helicase-like protein; n=7;
Prochlorococcus marinus|Rep: DEAD/DEAH box helicase-like
protein - Prochlorococcus marinus (strain MIT 9312)
Length = 593
Score = 138 bits (334), Expect = 1e-31
Identities = 72/191 (37%), Positives = 112/191 (58%), Gaps = 2/191 (1%)
Frame = +1
Query: 175 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 354
F D + +L + G++ P+ IQ+ AI + GRD++ QAQ+GTGKTA F++ ++++
Sbjct: 53 FLDFGFNQSILNSLSNKGYKNPTPIQKAAIPELMLGRDLLGQAQTGTGKTAAFALPLIEK 112
Query: 355 I-DTSIRECQALILAPTRELAQQIQKVVIALG-DHLNAKCHACIGGTNVREDIRQLESGV 528
+ D + L++ PTRELA Q+ + + + N K A GGT+ R I L+ V
Sbjct: 113 LADNKELNAKVLVMTPTRELATQVAESFKSYSSESTNFKTIAIYGGTDYRNQIYALKRKV 172
Query: 529 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVXVILL 708
VVVGTPGR+ D I + N+I VLDEADEML+ GF + I + L + ++L
Sbjct: 173 DVVVGTPGRIMDHIRQGTFKVNSINCLVLDEADEMLNMGFLEDIEWIIDQLPKNKQMVLF 232
Query: 709 SATMPDDVLEV 741
SATMP+++ +
Sbjct: 233 SATMPNEIRNI 243
>UniRef50_Q11039 Cluster: Cold-shock DEAD box protein A homolog;
n=31; Bacteria|Rep: Cold-shock DEAD box protein A
homolog - Mycobacterium tuberculosis
Length = 563
Score = 138 bits (334), Expect = 1e-31
Identities = 76/185 (41%), Positives = 104/185 (56%), Gaps = 1/185 (0%)
Frame = +1
Query: 172 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 351
TF D+ + +LR I G+E P+AIQ I + G DV+ AQ+GTGKTA F+I +L
Sbjct: 14 TFADLQIHPRVLRAIGDVGYESPTAIQAATIPALMAGSDVVGLAQTGTGKTAAFAIPMLS 73
Query: 352 QIDTSIRECQALILAPTRELAQQIQKVVIALGDHLN-AKCHACIGGTNVREDIRQLESGV 528
+ID + + QAL+L PTRELA Q+ + G +L+ GG++ + L G
Sbjct: 74 KIDITSKVPQALVLVPTRELALQVAEAFGRYGAYLSQLNVLPIYGGSSYAVQLAGLRRGA 133
Query: 529 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVXVILL 708
VVVGTPGR+ D + R L + + VLDEADEML+ GF D + + V L
Sbjct: 134 QVVVGTPGRMIDHLERATLDLSRVDFLVLDEADEMLTMGFADDVERILSETPEYKQVALF 193
Query: 709 SATMP 723
SATMP
Sbjct: 194 SATMP 198
>UniRef50_P20449 Cluster: ATP-dependent RNA helicase DBP5; n=23;
Dikarya|Rep: ATP-dependent RNA helicase DBP5 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 482
Score = 138 bits (334), Expect = 1e-31
Identities = 80/191 (41%), Positives = 118/191 (61%), Gaps = 3/191 (1%)
Frame = +1
Query: 169 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQG--RDVIAQAQSGTGKTATFSIS 342
++FD++ L ELL+GIYA F+KPS IQ+RA+ + R++IAQ+QSGTGKTA FS++
Sbjct: 92 KSFDELGLAPELLKGIYAMKFQKPSKIQERALPLLLHNPPRNMIAQSQSGTGKTAAFSLT 151
Query: 343 ILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLES 522
+L +++ QA+ LAP+RELA+Q +VV +G + + E +Q+ +
Sbjct: 152 MLTRVNPEDASPQAICLAPSRELARQTLEVVQEMGKFTKITSQLIV--PDSFEKNKQINA 209
Query: 523 GVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEML-SRGFKDQIHDVFKMLSADVXV 699
V+VGTPG V D++ R+ + IK+FVLDEAD ML +G DQ V + L D +
Sbjct: 210 --QVIVGTPGTVLDLMRRKLMQLQKIKIFVLDEADNMLDQQGLGDQCIRVKRFLPKDTQL 267
Query: 700 ILLSATMPDDV 732
+L SAT D V
Sbjct: 268 VLFSATFADAV 278
>UniRef50_Q39MK8 Cluster: DEAD/DEAH box helicase; n=10;
Proteobacteria|Rep: DEAD/DEAH box helicase -
Burkholderia sp. (strain 383) (Burkholderia cepacia
(strain ATCC 17760/ NCIB 9086 / R18194))
Length = 481
Score = 138 bits (333), Expect = 2e-31
Identities = 72/192 (37%), Positives = 114/192 (59%), Gaps = 5/192 (2%)
Frame = +1
Query: 172 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 351
+F + L + LLR + ++ P+ +Q +AI + G+DV+A AQ+GTGKTA F++ +LQ
Sbjct: 2 SFASLGLIDPLLRNLQDLNYQAPTPVQAKAIPAVLGGKDVMAGAQTGTGKTAGFALPLLQ 61
Query: 352 QI-----DTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQL 516
++ S + L+L PTRELA+Q+ + IA G L+ + A GG ++ + +L
Sbjct: 62 RLVQHGPAVSSNRARVLVLVPTRELAEQVLQSFIAYGKGLDLRFLAAYGGVSINPQMMKL 121
Query: 517 ESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVX 696
GV V+V TPGR+ D+ + A+ + ++ VLDEAD ML GF +++ VF L A
Sbjct: 122 RKGVDVLVATPGRLLDLNRQNAVQFDQVQTLVLDEADRMLDLGFARELNAVFAALPAQRQ 181
Query: 697 VILLSATMPDDV 732
+L SAT DD+
Sbjct: 182 TLLFSATFSDDI 193
>UniRef50_A6DL95 Cluster: Probable ATP-dependent RNA helicase; n=1;
Lentisphaera araneosa HTCC2155|Rep: Probable
ATP-dependent RNA helicase - Lentisphaera araneosa
HTCC2155
Length = 482
Score = 138 bits (333), Expect = 2e-31
Identities = 68/186 (36%), Positives = 108/186 (58%)
Frame = +1
Query: 175 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 354
F D+ LK+ +L IY G++KP+ IQ +++ +QG+D + +A++GTGKTA F+I LQ
Sbjct: 7 FQDLGLKKTILSAIYTAGYKKPTPIQNKSLKIILQGQDALVRAKTGTGKTAAFAIPALQH 66
Query: 355 IDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHV 534
+ ++ Q LIL P REL +QI + I LG L A + G +++ G V
Sbjct: 67 LRAEVQHPQVLILTPGRELCKQISQEFIKLGKGLENFRVAEVTGGGKLSGVKKSLHGAQV 126
Query: 535 VVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVXVILLSA 714
+ TPGR+ D+ + L++N I + V+DEAD + GF++ + + K L V +L SA
Sbjct: 127 ISATPGRLIDIKEQGLLNSNCINMLVIDEADRLFDMGFREAVTSILKDLPKSVQTVLCSA 186
Query: 715 TMPDDV 732
T DD+
Sbjct: 187 TFTDDI 192
>UniRef50_O26305 Cluster: ATP-dependent RNA helicase, eIF-4A family;
n=1; Methanothermobacter thermautotrophicus str. Delta
H|Rep: ATP-dependent RNA helicase, eIF-4A family -
Methanobacterium thermoautotrophicum
Length = 425
Score = 138 bits (333), Expect = 2e-31
Identities = 71/189 (37%), Positives = 107/189 (56%)
Frame = +1
Query: 175 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 354
F + ++ ++ R + GFE + IQ + + G DV+ +AQ+GTGKTA F+I +L+
Sbjct: 6 FSEFDISGDINRALDDMGFESTTPIQALTLPVTLDGMDVVGEAQTGTGKTAAFAIPVLEN 65
Query: 355 IDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHV 534
++ R QALI+ PTREL Q+ + + +G ++ K A GG ++ I QL GVHV
Sbjct: 66 LEAE-RVPQALIICPTRELCLQVSEEIKRIGKYMKVKVLAVYGGQSIGNQIAQLRRGVHV 124
Query: 535 VVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVXVILLSA 714
+V TPGR+ D I R + I VLDEADEML+ GF D I + + +L SA
Sbjct: 125 IVATPGRLIDHIERGTVDLGGISTVVLDEADEMLNMGFIDDIERILSHVPERRQTMLFSA 184
Query: 715 TMPDDVLEV 741
T+ +L +
Sbjct: 185 TVSKPILRI 193
>UniRef50_UPI0000499A01 Cluster: DEAD/DEAH box helicase; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 684
Score = 137 bits (332), Expect = 2e-31
Identities = 68/189 (35%), Positives = 111/189 (58%), Gaps = 1/189 (0%)
Frame = +1
Query: 175 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 354
F M L ++ L G+ G+ P+ IQ++AI ++G D+IA A++G+GKTA + + I+ +
Sbjct: 15 FQSMGLNKQTLLGVLKKGYRVPTPIQRKAIPAILRGNDIIAMARTGSGKTAAYLVPIINR 74
Query: 355 IDTSIRE-CQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVH 531
++T E ++LI+ PTRELA Q KV LG N K IGG+ + + L SG
Sbjct: 75 LETHSTEGVRSLIICPTRELALQTIKVFNELGKLTNLKASLIIGGSKLSDQFDNLSSGPD 134
Query: 532 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVXVILLS 711
++V TPGR+ ++ + N +++ DEAD M GF +Q+ D+ +ML ++L S
Sbjct: 135 IIVATPGRLTFILEGANISLNRVEMVCFDEADLMFESGFSEQVSDIMRMLPPTRQILLFS 194
Query: 712 ATMPDDVLE 738
AT+P ++ E
Sbjct: 195 ATLPRNLAE 203
>UniRef50_A5UZK3 Cluster: DEAD/DEAH box helicase domain protein;
n=12; Bacteria|Rep: DEAD/DEAH box helicase domain
protein - Roseiflexus sp. RS-1
Length = 467
Score = 137 bits (332), Expect = 2e-31
Identities = 71/188 (37%), Positives = 106/188 (56%), Gaps = 1/188 (0%)
Frame = +1
Query: 172 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 351
+FD ++ GI G+ P+ IQ++ I + GRDVI AQ+GTGKTA F + ILQ
Sbjct: 2 SFDSFRFHPQITAGIRDLGYHTPTPIQEQVIPHALDGRDVIGIAQTGTGKTAAFVLPILQ 61
Query: 352 QIDTSIR-ECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGV 528
++ R +A+I+ PTRELA+QIQ V+ ALG + + GG + I++L GV
Sbjct: 62 RLMRGPRGRVRAMIVTPTRELAEQIQGVIEALGKYTGLRSVTLYGGVGYQGQIQRLRRGV 121
Query: 529 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVXVILL 708
+ V PGR+ D + R L + + +LDEAD+M GF + + ++ A +L
Sbjct: 122 EIAVVCPGRLLDHLERGTLTLEHLDMLILDEADQMFDMGFLPDVRRILRLAPAQRQTMLF 181
Query: 709 SATMPDDV 732
SATMPD +
Sbjct: 182 SATMPDAI 189
>UniRef50_A4B5L7 Cluster: ATP-dependent RNA helicase DbpA; n=3;
Proteobacteria|Rep: ATP-dependent RNA helicase DbpA -
Alteromonas macleodii 'Deep ecotype'
Length = 459
Score = 137 bits (332), Expect = 2e-31
Identities = 72/193 (37%), Positives = 111/193 (57%), Gaps = 1/193 (0%)
Frame = +1
Query: 166 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 345
VET +++ + + + + G + S IQ +++ +QG+DVI QAQ+G+GKT F I
Sbjct: 3 VETVKQLDINPAITKALDSQGIHQLSPIQAQSLPDALQGKDVIGQAQTGSGKTLCFVIPA 62
Query: 346 LQQIDTSIRECQALILAPTRELAQQI-QKVVIALGDHLNAKCHACIGGTNVREDIRQLES 522
L++I+ + QA++L PTRELA+Q+ Q+ A D N K GG + I+ L+
Sbjct: 63 LEKIEVNDFSTQAIMLCPTRELAEQVAQQCRSAAKDIGNIKVTTLCGGQPMGPQIQSLKH 122
Query: 523 GVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVXVI 702
H++VGTPGRV D + +R + +KL VLDEAD ML GF+D + +F V +
Sbjct: 123 SPHIIVGTPGRVMDHVEKRRIDLRNVKLRVLDEADRMLDMGFEDDLRIIFGQTPKQVQTL 182
Query: 703 LLSATMPDDVLEV 741
L SAT + + V
Sbjct: 183 LFSATFTEQIERV 195
>UniRef50_A0VLH7 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Rhodobacteraceae|Rep: DEAD/DEAH box helicase domain
protein - Dinoroseobacter shibae DFL 12
Length = 508
Score = 137 bits (331), Expect = 3e-31
Identities = 74/194 (38%), Positives = 110/194 (56%), Gaps = 5/194 (2%)
Frame = +1
Query: 175 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 354
FD + L L+ G+ A P+ IQ RAI + GRDV+ AQ+GTGKTA F + +L
Sbjct: 73 FDMLGLSPRLVAGLAAQNITDPTPIQTRAIPHGLNGRDVLGIAQTGTGKTAAFGLPLLDA 132
Query: 355 I-----DTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLE 519
+ + R C+ LILAPTREL QI + + A + + K +GG + I++ E
Sbjct: 133 LMKAGTKPAPRTCRGLILAPTRELVSQICESLRAFTEGSHLKLQVIVGGVAIGPQIKRAE 192
Query: 520 SGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVXV 699
G ++V TPGR+ D++ R+AL + + VLDEAD+ML GF + + +L A+
Sbjct: 193 RGADLIVATPGRLIDLLDRKALRLSETRFLVLDEADQMLDLGFIHALRKIAPLLPAERQT 252
Query: 700 ILLSATMPDDVLEV 741
+L SATMP + E+
Sbjct: 253 MLFSATMPKQMEEL 266
>UniRef50_A0M3C7 Cluster: RhlE-like DEAD box family ATP-dependent
RNA helicase; n=4; Bacteroidetes|Rep: RhlE-like DEAD box
family ATP-dependent RNA helicase - Gramella forsetii
(strain KT0803)
Length = 455
Score = 136 bits (330), Expect = 4e-31
Identities = 68/191 (35%), Positives = 114/191 (59%), Gaps = 1/191 (0%)
Frame = +1
Query: 172 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 351
+F D+NL L + F+ P+ IQ++A + GRDV+ AQ+GTGKT + + +L+
Sbjct: 10 SFQDLNLNTPLRNALEDLNFQTPTPIQEQAFSSIMSGRDVVGIAQTGTGKTFAYLLPLLR 69
Query: 352 QIDTSIREC-QALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGV 528
+ S ++ + LI+ PTREL Q+ + + L ++N + GG N+ + L G+
Sbjct: 70 MLKYSEQKNPRILIMVPTRELVVQVVEEIEKLAKYINLRVAGVYGGVNINTQHQDLMQGL 129
Query: 529 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVXVILL 708
+VV TP R+YD++ RRA+ +I+ FV+DE D ML GFK Q++++ ++L + I+
Sbjct: 130 DIVVATPRRLYDLVLRRAVQLKSIQKFVIDEVDVMLDLGFKFQVNNIIELLPKNRQSIMF 189
Query: 709 SATMPDDVLEV 741
SATM + V E+
Sbjct: 190 SATMTETVEEM 200
>UniRef50_P42305 Cluster: ATP-dependent RNA helicase dbpA; n=9;
Firmicutes|Rep: ATP-dependent RNA helicase dbpA -
Bacillus subtilis
Length = 479
Score = 136 bits (329), Expect = 5e-31
Identities = 65/186 (34%), Positives = 111/186 (59%)
Frame = +1
Query: 175 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 354
F + + ++LR + G+ +P+ +QQ I ++ +D++ ++Q+G+GKTA+F I + +
Sbjct: 4 FKNYQISHDILRALEGLGYTEPTKVQQSVIPAALERKDLVVKSQTGSGKTASFGIPLCEL 63
Query: 355 IDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHV 534
+ + QALIL PTRELA Q+++ + +G K A G ++ + +L+ H+
Sbjct: 64 ANWDENKPQALILTPTRELAVQVKEDITNIGRFKRIKATAVFGKSSFDKQKAELKQKSHI 123
Query: 535 VVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVXVILLSA 714
VVGTPGRV D I + L + + V+DEADEML+ GF +Q+ + K L + +L SA
Sbjct: 124 VVGTPGRVLDHIEKGTLPLDRLSYLVIDEADEMLNMGFIEQVEAIIKHLPTERTTMLFSA 183
Query: 715 TMPDDV 732
T+P D+
Sbjct: 184 TLPQDI 189
>UniRef50_Q2LY23 Cluster: Superfamily II DNA and RNA helicases; n=2;
Bacteria|Rep: Superfamily II DNA and RNA helicases -
Syntrophus aciditrophicus (strain SB)
Length = 572
Score = 136 bits (328), Expect = 7e-31
Identities = 69/195 (35%), Positives = 115/195 (58%), Gaps = 3/195 (1%)
Frame = +1
Query: 166 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGR--DVIAQAQSGTGKTATFSI 339
++TF + + ++++G+ GF + +Q++ I+P + R D++ AQ+GTGKTA F I
Sbjct: 1 MKTFAEFEINTDIMKGLDGLGFSVMTPVQEK-IIPIVLNRQTDLVGLAQTGTGKTAAFGI 59
Query: 340 SILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNA-KCHACIGGTNVREDIRQL 516
++Q DT ++ QAL+L PTREL Q+ + +G ++ K GG ++ +L
Sbjct: 60 PLIQLTDTRLKRTQALVLCPTRELCVQVAGDLNLMGRYVQKLKIVPVYGGASIVSQTEEL 119
Query: 517 ESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVX 696
G VVV TPGR++D+I R A+ + + VLDEADEML GF+D+++ + +
Sbjct: 120 RKGAQVVVATPGRLHDLIRRGAVDLSGVSWVVLDEADEMLQMGFQDELNAILAVTPDSKN 179
Query: 697 VILLSATMPDDVLEV 741
+L SATMP +V +
Sbjct: 180 TLLFSATMPREVAAI 194
>UniRef50_A6TTG0 Cluster: DEAD/DEAH box helicase domain protein;
n=3; Clostridiaceae|Rep: DEAD/DEAH box helicase domain
protein - Alkaliphilus metalliredigens QYMF
Length = 549
Score = 136 bits (328), Expect = 7e-31
Identities = 67/186 (36%), Positives = 107/186 (57%)
Frame = +1
Query: 175 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 354
F + + EE+ + +P+ +Q +AI P + RDV+AQAQ+GTGKT F + IL++
Sbjct: 5 FAKLGISEEIENVLNKSDITEPTPVQLQAIPPLLAQRDVMAQAQTGTGKTLAFILPILER 64
Query: 355 IDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHV 534
++ QALI+ PTRELA QI L + A GG +V + +R+L+ +H+
Sbjct: 65 VNVEKPTIQALIITPTRELAIQITAETKKLAEVKGINILAAYGGQDVEQQLRKLKGSIHI 124
Query: 535 VVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVXVILLSA 714
++GTPGR+ D + R+ ++ + + VLDEAD+ML GF + D+ + + SA
Sbjct: 125 IIGTPGRLLDHLRRKTINLGKLSMLVLDEADQMLHMGFLRDVEDIMTHIPKRRQNMFFSA 184
Query: 715 TMPDDV 732
TMP+ V
Sbjct: 185 TMPNQV 190
>UniRef50_A6DK15 Cluster: ATP-dependent RNA helicase, specific for
23S rRNA; n=1; Lentisphaera araneosa HTCC2155|Rep:
ATP-dependent RNA helicase, specific for 23S rRNA -
Lentisphaera araneosa HTCC2155
Length = 462
Score = 136 bits (328), Expect = 7e-31
Identities = 66/190 (34%), Positives = 110/190 (57%), Gaps = 1/190 (0%)
Frame = +1
Query: 175 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 354
F + L E+L++ + + G+E+ + IQ+ ++ + G+D+IAQA++GTGKTA F + +L +
Sbjct: 6 FASLPLSEDLIKNVASLGYEEMTEIQELSLPAILDGKDLIAQAKTGTGKTAAFGLGVLSK 65
Query: 355 IDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNVREDIRQLESGVH 531
+ Q LIL PTREL +Q+ K + L + N K + GG R ++ + G H
Sbjct: 66 LVLDDYRIQVLILCPTRELCEQVSKAIRDLARMMPNIKLLSLGGGMPFRPQMKSVAHGAH 125
Query: 532 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVXVILLS 711
+VVGTPGR+ + + +L + ++ VLDEAD ML GF+D+I + + +L S
Sbjct: 126 IVVGTPGRILKHLNKSSLSLDHVRTLVLDEADRMLDMGFQDEIDAIIDQTNKQRQTLLFS 185
Query: 712 ATMPDDVLEV 741
AT P + +
Sbjct: 186 ATYPKKIATI 195
>UniRef50_A4J5M3 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Clostridiales|Rep: DEAD/DEAH box helicase domain
protein - Desulfotomaculum reducens MI-1
Length = 438
Score = 136 bits (328), Expect = 7e-31
Identities = 70/188 (37%), Positives = 112/188 (59%), Gaps = 2/188 (1%)
Frame = +1
Query: 163 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSIS 342
+V +FD + + ++ G+ G + P+AIQ+ AI ++ +D+I Q+Q+G+GKT + +
Sbjct: 1 MVTSFDKLEIDADIAEGLSKQGIKNPTAIQKVAIPLALKNKDIIGQSQTGSGKTLAYLLP 60
Query: 343 ILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDH--LNAKCHACIGGTNVREDIRQL 516
I Q+ID+S RE QALILAPT EL QI K + L + L IG N+ I +L
Sbjct: 61 IFQKIDSSKRETQALILAPTHELVMQIDKQIKTLSSNAGLTINSTVMIGEVNIVRQIEKL 120
Query: 517 ESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVX 696
+ H++VG+ GRV ++I R+ + ++TIK V+DEAD +L + + DV K D
Sbjct: 121 KEKPHIIVGSTGRVLELIKRKKISSHTIKTIVIDEADMLLDQNNLAGVKDVIKTTMRDRQ 180
Query: 697 VILLSATM 720
+++ SA M
Sbjct: 181 LMIFSAYM 188
>UniRef50_Q56XG6 Cluster: DEAD-box ATP-dependent RNA helicase 15;
n=27; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
15 - Arabidopsis thaliana (Mouse-ear cress)
Length = 427
Score = 136 bits (328), Expect = 7e-31
Identities = 80/193 (41%), Positives = 110/193 (56%), Gaps = 4/193 (2%)
Frame = +1
Query: 175 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 354
F D LK ELLR I GFE PS +Q I I G DVI QA+SG GKTA F +S LQQ
Sbjct: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
Query: 355 IDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNVR--EDIRQLESG 525
I+ S + AL+L TRELA QI + +L + K GG N++ +D+ + E
Sbjct: 108 IEPSPGQVSALVLCHTRELAYQICNEFVRFSTYLPDTKVSVFYGGVNIKIHKDLLKNEC- 166
Query: 526 VHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEML-SRGFKDQIHDVFKMLSADVXVI 702
H+VVGTPGRV + + L ++ F+LDE D+ML S + + ++FKM D V+
Sbjct: 167 PHIVVGTPGRVLALAREKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVM 226
Query: 703 LLSATMPDDVLEV 741
+ SAT+ ++ V
Sbjct: 227 MFSATLSKEIRPV 239
>UniRef50_Q6A841 Cluster: Putative ATP-dependent RNA helicase; n=1;
Propionibacterium acnes|Rep: Putative ATP-dependent RNA
helicase - Propionibacterium acnes
Length = 561
Score = 135 bits (327), Expect = 9e-31
Identities = 79/233 (33%), Positives = 122/233 (52%), Gaps = 10/233 (4%)
Frame = +1
Query: 67 PEDSKNGPSKDQGSYDGPPGMDPGTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSA 246
P+ + N ++ DGP + TL V +F D+ ++E++ + + G P
Sbjct: 19 PDVALNDVTRTTPGLDGPTHEEAKTLTETTVSVPTSFADLGVREDICQALEGVGIVSPFP 78
Query: 247 IQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQID----------TSIRECQALILA 396
IQ +I ++G D+I QA++GTGKT F I+IL +I T+ + QAL++
Sbjct: 79 IQAMSIPIAVEGTDLIGQARTGTGKTLAFGITILLRITLPGDEGWEELTTKGKPQALVMC 138
Query: 397 PTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVYDMITR 576
PTRELA Q+ K + A+ GG I L++GV VVVGTPGR+ D+ R
Sbjct: 139 PTRELALQVSKDISTAASVRGARVLTVYGGVGYESQIDALKAGVDVVVGTPGRLLDLSQR 198
Query: 577 RALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVXVILLSATMPDDVL 735
+ L + +++ VLDEADEML GF + ++ A +L SATMP ++
Sbjct: 199 KDLDLSHVRIVVLDEADEMLDLGFLPDVENLIGRTPASRQTMLFSATMPAPIM 251
>UniRef50_Q0FAJ4 Cluster: Dead-box ATP-dependent RNA helicase; n=6;
Alphaproteobacteria|Rep: Dead-box ATP-dependent RNA
helicase - alpha proteobacterium HTCC2255
Length = 531
Score = 135 bits (326), Expect = 1e-30
Identities = 68/191 (35%), Positives = 110/191 (57%), Gaps = 5/191 (2%)
Frame = +1
Query: 175 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 354
F + L E+++ + G+ P+ IQ +AI + +D++ AQ+GTGKTA F++ ++QQ
Sbjct: 105 FSKLGLDAEIVKALGFLGYTLPTPIQSQAIPAVLNSKDLVGLAQTGTGKTAAFALPLIQQ 164
Query: 355 -----IDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLE 519
I R +A+IL+PTRELA QI + ++ G L IGG +R+ +R L
Sbjct: 165 LLMNPIAIKGRSARAIILSPTRELALQIHEAFVSFGKRLPLNFTHAIGGAPIRKQMRDLS 224
Query: 520 SGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVXV 699
GV ++V TPGR+ D++ ++ L + K VLDEAD+ML GF + + ++ D
Sbjct: 225 KGVDILVATPGRLEDLVDQKGLRLDETKFLVLDEADQMLDIGFLPAVKRIISKVNKDRQT 284
Query: 700 ILLSATMPDDV 732
+L SATM ++
Sbjct: 285 LLFSATMSKEI 295
>UniRef50_A5G1U8 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Acidiphilium cryptum JF-5|Rep: DEAD/DEAH box
helicase domain protein - Acidiphilium cryptum (strain
JF-5)
Length = 525
Score = 135 bits (326), Expect = 1e-30
Identities = 75/199 (37%), Positives = 105/199 (52%), Gaps = 5/199 (2%)
Frame = +1
Query: 151 DWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTAT 330
D V+ F + L E LLR I +E P+ IQ R+I ++G D++ AQ+GTGKTA
Sbjct: 51 DESAVLTDFTTLGLAEPLLRAISEQSYETPTPIQARSIPVMLEGHDLVGIAQTGTGKTAA 110
Query: 331 FSISILQQIDTSI-----RECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNV 495
F + IL +I + R C+AL+LAPTRELA QI G IGG
Sbjct: 111 FVLPILHRIAANRARPAPRACRALVLAPTRELATQIADAARTYGKFTRPSVAVVIGGAKP 170
Query: 496 REDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFK 675
R++ESGV ++V TPGR+ D + + + ++ VLDEAD+ML GF I +
Sbjct: 171 GPQARRMESGVDLLVATPGRLLDHVAAGVIRLDAVETVVLDEADQMLDLGFIPAIRQIMA 230
Query: 676 MLSADVXVILLSATMPDDV 732
L ++ SATMP +
Sbjct: 231 KLPRQRQAVMFSATMPKPI 249
>UniRef50_A0KTC9 Cluster: DEAD/DEAH box helicase domain protein;
n=132; Bacteria|Rep: DEAD/DEAH box helicase domain
protein - Shewanella sp. (strain ANA-3)
Length = 578
Score = 135 bits (326), Expect = 1e-30
Identities = 70/194 (36%), Positives = 113/194 (58%), Gaps = 4/194 (2%)
Frame = +1
Query: 172 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 351
+F + L + + + G++ PS IQ +AI + G+DV+A AQ+GTGKTA F++ +L+
Sbjct: 2 SFSSLGLSAPIQKAVTEQGYDTPSPIQAQAIPAVLTGKDVMAAAQTGTGKTAGFTLPLLE 61
Query: 352 QIDTSIR----ECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLE 519
+ + + +AL+L PTRELA Q+ + V G +L + GG + I++L
Sbjct: 62 LLSKGNKAKAGQIRALVLTPTRELAAQVSESVETYGKYLPLRSAVVFGGVPINPQIQKLR 121
Query: 520 SGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVXV 699
GV V+V TPGR+ D+ ++A+ N +++ VLDEAD ML GF I + ML A
Sbjct: 122 HGVDVLVATPGRLLDLEQQKAVKFNQLEVLVLDEADRMLDMGFIRDIKKILAMLPAKRQN 181
Query: 700 ILLSATMPDDVLEV 741
++ SAT D++ E+
Sbjct: 182 LMFSATFSDEIREL 195
>UniRef50_A4RIF1 Cluster: ATP-dependent RNA helicase DBP5; n=7;
Ascomycota|Rep: ATP-dependent RNA helicase DBP5 -
Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 504
Score = 135 bits (326), Expect = 1e-30
Identities = 91/238 (38%), Positives = 131/238 (55%), Gaps = 7/238 (2%)
Frame = +1
Query: 40 SSERRSEDWPEDSKNGPSKDQGSYDGPPGMDPGTLDTDWD-QVVETFDDMNLKEELLRGI 216
SS D D N + +YD + G DTD + +F ++ L + ++ G+
Sbjct: 54 SSTLAVPDGAADGANSSGLQESNYDVEVQL--GDPDTDSPLSSISSFSELGLPQGIIDGL 111
Query: 217 YAYGFEKPSAIQQRAIMPCIQG--RDVIAQAQSGTGKTATFSISILQQID-TSIRECQAL 387
A F+KPS IQ RA+ + R++IAQ+QSGTGKT F ++IL ++D + QAL
Sbjct: 112 LAMNFKKPSKIQARALPLMLSNPPRNMIAQSQSGTGKTGAFVVTILSRVDFNQPNQPQAL 171
Query: 388 ILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGV--HVVVGTPGRVY 561
LAP+RELA+QIQ V+ ++G C + + I + E+GV +VVVGTPG V
Sbjct: 172 ALAPSRELARQIQSVIQSIGQF----CTGLVVDAAIPGAISR-ETGVKANVVVGTPGTVM 226
Query: 562 DMITRRALHANTIKLFVLDEADEML-SRGFKDQIHDVFKMLSADVXVILLSATMPDDV 732
D+I RR + +KL V+DEAD ML +G +Q V ML + +L SAT PD V
Sbjct: 227 DLIRRRQFDVSQLKLLVVDEADNMLDQQGLGEQCVRVKNMLPKTIQTLLFSATFPDHV 284
>UniRef50_Q82T78 Cluster: RhlE; ATP-dependent RNA helicase RhlE;
n=3; Nitrosomonadaceae|Rep: RhlE; ATP-dependent RNA
helicase RhlE - Nitrosomonas europaea
Length = 498
Score = 134 bits (325), Expect = 2e-30
Identities = 72/195 (36%), Positives = 114/195 (58%), Gaps = 8/195 (4%)
Frame = +1
Query: 172 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 351
TF + L E+L + G+ P+ IQ + I + G+DV+A AQ+GTGKTA F++ +L
Sbjct: 6 TFAQLGLSSEILHAVNDEGYVNPTPIQAQVIPSILAGKDVMASAQTGTGKTAGFTLPLLY 65
Query: 352 QI----DTSIRECQ----ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDI 507
++ +TS+ + ALI+APTRELA QI + V G +L + GG N+ I
Sbjct: 66 RLQAYANTSVSPARHPVRALIMAPTRELAMQIDESVRKYGKYLALRTAVVFGGINIEPQI 125
Query: 508 RQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSA 687
L++GV ++V TPGR+ D++ ++A++ + ++ VLDEAD ML GF I V +LS
Sbjct: 126 AALQAGVEILVATPGRLLDLVEQKAVNFSKTEILVLDEADRMLDMGFLPDIKRVMALLSP 185
Query: 688 DVXVILLSATMPDDV 732
++ SAT ++
Sbjct: 186 QRQSLMFSATFSGEI 200
>UniRef50_Q6MR64 Cluster: ATP-dependent RNA helicase; n=5; cellular
organisms|Rep: ATP-dependent RNA helicase - Bdellovibrio
bacteriovorus
Length = 505
Score = 134 bits (325), Expect = 2e-30
Identities = 73/191 (38%), Positives = 106/191 (55%), Gaps = 5/191 (2%)
Frame = +1
Query: 175 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 354
F D+ L L + G+E P+ IQ AI ++G D++ AQ+GTGKTA FS+ ILQ
Sbjct: 6 FTDLPLIAPLQFSLKEAGYETPTPIQLAAIPVILEGHDLLGIAQTGTGKTAAFSLPILQN 65
Query: 355 IDTSIRECQ-----ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLE 519
+ R+ + LIL PTRELA QI + + A HLN K GG +R L+
Sbjct: 66 LSKHTRKIEPKSPRCLILTPTRELAIQIHENIEAYSKHLNMKHAVIFGGVGQNPQVRALQ 125
Query: 520 SGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVXV 699
GV +++ TPGR+ D+ ++ L + +++FVLDEAD ML GF I + +L
Sbjct: 126 GGVDILIATPGRLMDLHGQKHLKLDRVEIFVLDEADRMLDMGFMQDIKKILPLLPQKRHN 185
Query: 700 ILLSATMPDDV 732
+ SATMP ++
Sbjct: 186 LFFSATMPHEI 196
>UniRef50_Q15T34 Cluster: DEAD/DEAH box helicase-like; n=1;
Pseudoalteromonas atlantica T6c|Rep: DEAD/DEAH box
helicase-like - Pseudoalteromonas atlantica (strain T6c
/ BAA-1087)
Length = 458
Score = 134 bits (325), Expect = 2e-30
Identities = 69/191 (36%), Positives = 109/191 (57%), Gaps = 4/191 (2%)
Frame = +1
Query: 172 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 351
+F+ + L++EL+ I G+ + IQ+ AI + D++A AQ+GTGKTA F++ +LQ
Sbjct: 2 SFEALGLRDELIHAIATQGYSVATDIQREAIPLVLAQHDLLAVAQTGTGKTAAFTLPLLQ 61
Query: 352 QI----DTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLE 519
++ T ++ ++LI+ PTRELA Q+ V LN + A GG + I QL+
Sbjct: 62 RLAAKQSTKVQGVRSLIVTPTRELAAQVAISVEIYSTQLNIRSFAVYGGVRIEPQIAQLQ 121
Query: 520 SGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVXV 699
GV V++ TPGR+ D+ +RALH +++ V DEAD ML GF D + + +L
Sbjct: 122 EGVDVLIATPGRLLDLYEQRALHFENLEILVFDEADRMLDLGFIDDVKRIQSLLPVKRQT 181
Query: 700 ILLSATMPDDV 732
+L SAT +
Sbjct: 182 LLFSATFSKQI 192
>UniRef50_A6G4U7 Cluster: DEAD/DEAH box helicase; n=2; Plesiocystis
pacifica SIR-1|Rep: DEAD/DEAH box helicase -
Plesiocystis pacifica SIR-1
Length = 1390
Score = 134 bits (325), Expect = 2e-30
Identities = 74/199 (37%), Positives = 107/199 (53%), Gaps = 4/199 (2%)
Frame = +1
Query: 157 DQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFS 336
D ET+D+M L E + + A G+ P+ +Q R IQG DV+ Q+Q+G+GKT F
Sbjct: 152 DPAPETWDEMALPEHVRNAVDAAGWTAPTKVQARTYETMIQGTDVLVQSQTGSGKTGAFC 211
Query: 337 ISIL----QQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVRED 504
+ L Q D + Q ++L PTRELA+Q+ ++ L GGT +
Sbjct: 212 LPWLANRFQPGDAAETGVQLIVLLPTRELAKQVCNELVRLAIETPVDVLPVYGGTAMNPQ 271
Query: 505 IRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLS 684
+ L GVH VVGTPGRV D I R++L + ++ VLDE DEMLS GF + I + +
Sbjct: 272 LDALARGVHAVVGTPGRVLDHIRRKSLDLSKVRTVVLDECDEMLSMGFLEDIRAILRACP 331
Query: 685 ADVXVILLSATMPDDVLEV 741
+ L SAT+P D+ +
Sbjct: 332 KERQTCLFSATVPRDIARI 350
>UniRef50_A6DIU5 Cluster: Probable ATP dependent RNA helicase; n=1;
Lentisphaera araneosa HTCC2155|Rep: Probable ATP
dependent RNA helicase - Lentisphaera araneosa HTCC2155
Length = 537
Score = 134 bits (325), Expect = 2e-30
Identities = 73/187 (39%), Positives = 111/187 (59%), Gaps = 1/187 (0%)
Frame = +1
Query: 166 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCI-QGRDVIAQAQSGTGKTATFSIS 342
++ F + L+ + + + A GF++PS IQ++AI + Q D+I QAQ+GTGKTA F +
Sbjct: 1 MDKFTALGLEPWITQCLEAKGFKEPSPIQEQAIPVLLSQDHDIIGQAQTGTGKTAAFGLP 60
Query: 343 ILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLES 522
I+Q+I+ +++ QALIL PTRELA Q+ + + + GG + + R L+
Sbjct: 61 IVQKIEPGLKKPQALILCPTRELAIQVNEEIKSFCKGRGITTVTLYGGAPIMDQKRALKK 120
Query: 523 GVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVXVI 702
GV +VV TPGR I L ++++ VLDEADEML+ GF + + V K D V+
Sbjct: 121 GVDLVVATPGRCIHFIEDGKLELDSLEYLVLDEADEMLNMGFVEDVEKVLKASPDDRTVL 180
Query: 703 LLSATMP 723
+ SATMP
Sbjct: 181 MFSATMP 187
>UniRef50_Q0TQ86 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=3; Clostridium perfringens|Rep: ATP-dependent
RNA helicase, DEAD/DEAH box family - Clostridium
perfringens (strain ATCC 13124 / NCTC 8237 / Type A)
Length = 405
Score = 134 bits (324), Expect = 2e-30
Identities = 68/193 (35%), Positives = 116/193 (60%), Gaps = 2/193 (1%)
Frame = +1
Query: 166 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 345
++ F + L EE+L+ + G E+P+ IQ++AI ++G++VI +A++GTGKT + + I
Sbjct: 1 MDKFLKLGLSEEVLKSLVGLGIEEPTDIQEKAIPEILKGKNVIGKAETGTGKTLAYLLPI 60
Query: 346 LQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHA--CIGGTNVREDIRQLE 519
+++ID S E QA+IL+PT EL QI V+ L L K + +G N++ + +L+
Sbjct: 61 IEKIDDSKNEMQAIILSPTHELGVQINNVLNDLKRGLGKKITSTTLVGSGNIKRQMEKLK 120
Query: 520 SGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVXV 699
+ H++VGT GR+ ++I ++ + NTIK V+DE D++L + V K D
Sbjct: 121 NKPHILVGTTGRILELINKKKITTNTIKTIVIDEGDKLLDFINIKDVKSVVKSCPRDTQK 180
Query: 700 ILLSATMPDDVLE 738
++ SATM + LE
Sbjct: 181 LIFSATMNEKALE 193
>UniRef50_A1U3D6 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Marinobacter aquaeolei VT8|Rep: DEAD/DEAH box
helicase domain protein - Marinobacter aquaeolei (strain
ATCC 700491 / DSM 11845 / VT8)(Marinobacter
hydrocarbonoclasticus (strain DSM 11845))
Length = 528
Score = 134 bits (324), Expect = 2e-30
Identities = 72/191 (37%), Positives = 105/191 (54%), Gaps = 1/191 (0%)
Frame = +1
Query: 172 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 351
+F ++ L +L + A G+E PS IQ ++I + G ++ AQ+GTGKTA F++ +L
Sbjct: 25 SFAELGLDPAVLEAVSAVGYETPSPIQAQSIPALLAGNHLLGVAQTGTGKTAAFALPLLS 84
Query: 352 QIDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNVREDIRQLESGV 528
+ID ++ E Q L+LAPTRELA Q+ + N GG + IR L+ G
Sbjct: 85 RIDANVAEPQILVLAPTRELAIQVAEAFTTYASKFRNFHVLPIYGGQDFSPQIRGLKRGA 144
Query: 529 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVXVILL 708
V+VGTPGR+ D + + L + +K VLDEADEML GF D + + L
Sbjct: 145 QVIVGTPGRMLDHLRKGTLKLDGLKALVLDEADEMLRMGFIDDVEAILAKTPDTCQRALF 204
Query: 709 SATMPDDVLEV 741
SATMP + +V
Sbjct: 205 SATMPPQIKKV 215
>UniRef50_Q8D7D0 Cluster: Superfamily II DNA and RNA helicase; n=20;
Gammaproteobacteria|Rep: Superfamily II DNA and RNA
helicase - Vibrio vulnificus
Length = 418
Score = 134 bits (323), Expect = 3e-30
Identities = 73/191 (38%), Positives = 105/191 (54%), Gaps = 6/191 (3%)
Frame = +1
Query: 163 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSIS 342
+ TF ++ L L + GF P+ IQQ+AI +QGRDV+A AQ+GTGKTA + +
Sbjct: 1 MTNTFIELGLDSSLSDHLSQLGFNTPTPIQQQAIPHLLQGRDVLAAAQTGTGKTAAYGLP 60
Query: 343 ILQQIDTSIRE------CQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVRED 504
++Q + RE +ALILAPTRELAQQ+ + H GGT++R
Sbjct: 61 LIQMLSRQSREETAPKHPRALILAPTRELAQQVFDNLKQYAQHTELAIVTVYGGTSIRVQ 120
Query: 505 IRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLS 684
QL GV +++ TPGR+ D + + N +++ VLDEAD ML GF I + K +
Sbjct: 121 QEQLAKGVDILIATPGRLLDHLFTKKTSLNQLQMLVLDEADRMLDMGFLPDIQRIMKRMP 180
Query: 685 ADVXVILLSAT 717
+ +L SAT
Sbjct: 181 EERQTLLFSAT 191
>UniRef50_Q89UH0 Cluster: Dead-box ATP-dependent RNA helicase; n=23;
Alphaproteobacteria|Rep: Dead-box ATP-dependent RNA
helicase - Bradyrhizobium japonicum
Length = 530
Score = 134 bits (323), Expect = 3e-30
Identities = 72/204 (35%), Positives = 108/204 (52%), Gaps = 5/204 (2%)
Frame = +1
Query: 145 DTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKT 324
D + ++ +F D L E + R + + P+ IQ + I + GRDV+ AQ+GTGKT
Sbjct: 8 DMERTHLLTSFQDFGLAEPIARALSEENYVTPTPIQAQTIPTALTGRDVVGIAQTGTGKT 67
Query: 325 ATFSISILQQ-----IDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGT 489
A+F++ IL + I + + L+L+PTREL+ QI A G H+ IGG
Sbjct: 68 ASFALPILHRLLEHRIKPQPKTTRVLVLSPTRELSGQILDSFNAYGRHIRLSSTLAIGGV 127
Query: 490 NVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDV 669
+ +R L GV V+V TPGR+ D++ L +++ VLDEAD ML GF + I +
Sbjct: 128 PMGRQVRSLMQGVEVLVATPGRLLDLVQSNGLKLGSVEFLVLDEADRMLDMGFINDIRKI 187
Query: 670 FKMLSADVXVILLSATMPDDVLEV 741
L + SATMP D+ E+
Sbjct: 188 VAKLPIKRQTLFFSATMPKDIAEL 211
>UniRef50_Q6MN50 Cluster: ATP-dependent RNA helicase; n=1;
Bdellovibrio bacteriovorus|Rep: ATP-dependent RNA
helicase - Bdellovibrio bacteriovorus
Length = 656
Score = 134 bits (323), Expect = 3e-30
Identities = 64/176 (36%), Positives = 103/176 (58%), Gaps = 1/176 (0%)
Frame = +1
Query: 166 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQG-RDVIAQAQSGTGKTATFSIS 342
V+ F+ L ++ + GF P+ IQ++A+ + G D I A +GTGKTA F I
Sbjct: 43 VDNFESFGLSAPVMAAMADMGFTTPTPIQRQALPILLAGANDFIGLASTGTGKTAAFGIP 102
Query: 343 ILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLES 522
+++ ID+++++ QAL+L+PTRELA Q+ + + LG + GG + R I ++
Sbjct: 103 LIENIDSTVKDTQALVLSPTRELALQVAEQLTLLGKKKGVRVVTIYGGASYRTQIDGIKR 162
Query: 523 GVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSAD 690
G H+VV TPGR+ D + ++ + ++K VLDEADEMLS GFK+ + + D
Sbjct: 163 GAHIVVATPGRLVDFLEQKMIKLQSVKTVVLDEADEMLSMGFKEALETILSATQPD 218
>UniRef50_Q0HKH0 Cluster: DEAD/DEAH box helicase domain protein;
n=37; Gammaproteobacteria|Rep: DEAD/DEAH box helicase
domain protein - Shewanella sp. (strain MR-4)
Length = 427
Score = 134 bits (323), Expect = 3e-30
Identities = 72/197 (36%), Positives = 111/197 (56%), Gaps = 8/197 (4%)
Frame = +1
Query: 166 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 345
V +F ++ + L + + P+ IQ I + GRDV+A A +G+GKTA F++ +
Sbjct: 8 VASFAELGIIAPLCNRLTELTYAAPTPIQAATIPAVLSGRDVLAGANTGSGKTAAFAVPL 67
Query: 346 LQQI------DTSIRECQALILAPTRELAQQIQKVVIALGDHLNA--KCHACIGGTNVRE 501
LQ++ + S + + L+L PTRELAQQ+ ++ H N K A GG +V
Sbjct: 68 LQRLFEAKTAEKSAGQVRCLVLVPTRELAQQVADSFLSYASHFNGQLKIVAAFGGVSVNL 127
Query: 502 DIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKML 681
++ L +G V+V TPGR+ D++ AL N + VLDEAD MLS GF D+++ V + L
Sbjct: 128 QMQSLRAGADVLVATPGRLLDLLASNALKLNRVLALVLDEADRMLSLGFTDELNQVLEAL 187
Query: 682 SADVXVILLSATMPDDV 732
A +L SAT P++V
Sbjct: 188 PAKKQTLLYSATFPEEV 204
>UniRef50_A0RUV7 Cluster: Superfamily II helicase; n=3;
Thermoprotei|Rep: Superfamily II helicase - Cenarchaeum
symbiosum
Length = 434
Score = 134 bits (323), Expect = 3e-30
Identities = 73/189 (38%), Positives = 109/189 (57%)
Frame = +1
Query: 175 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 354
F+++ +K+ +L + GFEK IQ+ AI + GRDV+ QA +GTGKT +SIS+LQ+
Sbjct: 4 FEELGIKQNVLDALRDMGFEKAFPIQEAAIPVLLTGRDVVGQAHTGTGKTGAYSISMLQE 63
Query: 355 IDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHV 534
I Q LI+APTRELA QI + V + + A GG ++ + L+ G +
Sbjct: 64 IKEG-GGIQGLIVAPTRELAVQITEEVKKFAKYTKVRPVAIYGGQSMGVQLDALKRGAEI 122
Query: 535 VVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVXVILLSA 714
+V TPGR+ D I R ++ + + VLDEAD ML GF D I + + + + L SA
Sbjct: 123 LVATPGRLIDHIKRGSISIDRVTHLVLDEADTMLDMGFIDDIQFILDLTPDEKVMSLFSA 182
Query: 715 TMPDDVLEV 741
TMP ++L +
Sbjct: 183 TMPIEILRL 191
>UniRef50_Q62IF8 Cluster: ATP-dependent RNA helicase RhlE; n=59;
Betaproteobacteria|Rep: ATP-dependent RNA helicase RhlE
- Burkholderia mallei (Pseudomonas mallei)
Length = 482
Score = 133 bits (322), Expect = 4e-30
Identities = 71/195 (36%), Positives = 108/195 (55%), Gaps = 8/195 (4%)
Frame = +1
Query: 172 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 351
TFD L E+L+ I G+ P+ IQ +AI + GRDV+ AQ+GTGKTA+FS+ I+Q
Sbjct: 12 TFDQFGLAAEILKAIAEQGYTTPTPIQAKAIPVVLSGRDVMGAAQTGTGKTASFSLPIIQ 71
Query: 352 ----QIDTSIRECQ----ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDI 507
Q +TS + ALIL PTRELA Q+ V A H + GG ++ +
Sbjct: 72 RLLPQANTSASPARHPVRALILTPTRELADQVAANVHAYAKHTPLRSAVVFGGVDMNPQM 131
Query: 508 RQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSA 687
+L GV +++ TPGR+ D + ++ + +++ VLDEAD ML GF + + +L
Sbjct: 132 AELRRGVEILIATPGRLLDHVQQKTANLGQVQILVLDEADRMLDMGFLPDLQRILNLLPK 191
Query: 688 DVXVILLSATMPDDV 732
+ +L SAT ++
Sbjct: 192 ERQTLLFSATFSPEI 206
>UniRef50_Q0HYG8 Cluster: DEAD/DEAH box helicase domain protein;
n=62; Proteobacteria|Rep: DEAD/DEAH box helicase domain
protein - Shewanella sp. (strain MR-7)
Length = 549
Score = 133 bits (322), Expect = 4e-30
Identities = 68/194 (35%), Positives = 112/194 (57%), Gaps = 4/194 (2%)
Frame = +1
Query: 172 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 351
+F + L + + + G++ PS IQ +AI + G+DV+A AQ+GTGKTA F++ +L+
Sbjct: 2 SFSSLGLSLPIQKAVTEQGYDTPSPIQAQAIPAVLTGKDVMAAAQTGTGKTAGFTLPLLE 61
Query: 352 QIDTSIR----ECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLE 519
+ + + +AL+L PTRELA Q+ + V G +L + GG + I++L
Sbjct: 62 LLSKGNKAKAGQIRALVLTPTRELAAQVSESVETYGKYLPLRSAVVFGGVPINPQIQKLR 121
Query: 520 SGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVXV 699
GV V+V TPGR+ D++ + + N +++ VLDEAD ML GF I + +L A
Sbjct: 122 HGVDVLVATPGRLLDLVQQNVVKFNQLEILVLDEADRMLDMGFIRDIKKILALLPAKRQN 181
Query: 700 ILLSATMPDDVLEV 741
++ SAT D++ E+
Sbjct: 182 LMFSATFSDEIREL 195
>UniRef50_UPI000065E01D Cluster: Homolog of Brachydanio rerio
"Eukaryotic translation initiation factor 4A, isoform
1A.; n=1; Takifugu rubripes|Rep: Homolog of Brachydanio
rerio "Eukaryotic translation initiation factor 4A,
isoform 1A. - Takifugu rubripes
Length = 357
Score = 133 bits (321), Expect = 5e-30
Identities = 64/92 (69%), Positives = 79/92 (85%)
Frame = +1
Query: 166 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 345
V++F+ M L E LLRGI+AYGFEKPSAIQQ+AI+PCI+G DVIAQ+QSGTGKTAT+ I+
Sbjct: 20 VDSFEGMMLNENLLRGIFAYGFEKPSAIQQQAIVPCIKGFDVIAQSQSGTGKTATYVIAA 79
Query: 346 LQQIDTSIRECQALILAPTRELAQQIQKVVIA 441
LQ+ID + QA+ILAPTRELA QIQKVV++
Sbjct: 80 LQRIDMMKEDTQAIILAPTRELANQIQKVVLS 111
Score = 81.4 bits (192), Expect = 2e-14
Identities = 42/77 (54%), Positives = 55/77 (71%)
Frame = +1
Query: 508 RQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSA 687
R+L + + VV + RV+D++ RRA+ A I+L VLDEAD+ML GFKDQIH++F L
Sbjct: 99 RELANQIQKVVLS--RVFDVLARRAVSAKAIRLLVLDEADQMLGNGFKDQIHEIFCKLPT 156
Query: 688 DVXVILLSATMPDDVLE 738
+V ILLSATMP VLE
Sbjct: 157 NVQAILLSATMPAHVLE 173
>UniRef50_Q087U7 Cluster: DEAD/DEAH box helicase domain protein;
n=5; Gammaproteobacteria|Rep: DEAD/DEAH box helicase
domain protein - Shewanella frigidimarina (strain NCIMB
400)
Length = 421
Score = 133 bits (321), Expect = 5e-30
Identities = 76/202 (37%), Positives = 116/202 (57%), Gaps = 14/202 (6%)
Frame = +1
Query: 172 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 351
+F D++L L+ + +++P+ IQ +AI + G+DV+A AQ+GTGKTA F++ +L
Sbjct: 2 SFADLSLHPILINRLAELKYQQPTPIQLQAIPVILSGKDVMAGAQTGTGKTAAFALPLLH 61
Query: 352 QI-----------DT---SIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGT 489
Q+ DT + AL+L PTRELAQQ+ + + GG
Sbjct: 62 QLLTHQDNLAAQPDTQHINSTPITALVLVPTRELAQQVHSSIEQYAYGSSVTSVMVYGGV 121
Query: 490 NVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDV 669
++ E IRQL +G H++V TPGR+ D++ +RAL + + V DEAD ML GFKD+I +V
Sbjct: 122 SIGEQIRQLANGTHILVATPGRLLDLLRKRALSLSQLTHLVFDEADRMLDMGFKDEIVEV 181
Query: 670 FKMLSADVXVILLSATMPDDVL 735
K L + +L SAT+ D +L
Sbjct: 182 LKRLPSTRQTLLFSATLDDRML 203
>UniRef50_Q54TF8 Cluster: DEAD-box RNA helicase; n=2; Dictyostelium
discoideum|Rep: DEAD-box RNA helicase - Dictyostelium
discoideum AX4
Length = 465
Score = 133 bits (321), Expect = 5e-30
Identities = 74/194 (38%), Positives = 120/194 (61%), Gaps = 2/194 (1%)
Frame = +1
Query: 166 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQG-RDVIAQAQSGTGKTATFSIS 342
V+TF+++ LK ELL+G+YA G+ KPS IQ+ A+ IQ ++IAQ+QSGTGKTA F++
Sbjct: 69 VKTFEELGLKPELLKGVYAMGYNKPSKIQEAALPIIIQSPNNLIAQSQSGTGKTAAFTLG 128
Query: 343 ILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLES 522
+L +D SI QA+ ++PT+ELA Q +V+ +G N K I V +++
Sbjct: 129 MLNCVDPSINAPQAICISPTKELALQTFEVISKIGQFSNIKPLLYISEIEVPKNVTN--- 185
Query: 523 GVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLS-RGFKDQIHDVFKMLSADVXV 699
V++GTPG++ + + ++ L +K+ VLDEAD ++ + +QI + ++L ++V V
Sbjct: 186 --QVIIGTPGKILENVIKKQLSVKFLKMVVLDEADFIVKMKNVPNQIAMINRLLPSNVKV 243
Query: 700 ILLSATMPDDVLEV 741
L SAT V E+
Sbjct: 244 CLFSATFSMGVEEL 257
>UniRef50_Q7A4G0 Cluster: Probable DEAD-box ATP-dependent RNA
helicase SA1885; n=13; Staphylococcus|Rep: Probable
DEAD-box ATP-dependent RNA helicase SA1885 -
Staphylococcus aureus (strain N315)
Length = 506
Score = 133 bits (321), Expect = 5e-30
Identities = 67/187 (35%), Positives = 111/187 (59%), Gaps = 1/187 (0%)
Frame = +1
Query: 166 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 345
++ F ++ + + ++ + + GF++P+ IQ+ +I +QG D++ QAQ+GTGKT F I +
Sbjct: 1 MQNFKELGISDNTVQSLESMGFKEPTPIQKDSIPYALQGIDILGQAQTGTGKTGAFGIPL 60
Query: 346 LQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESG 525
++++ + Q+LILAPTRELA Q+ + + + GG + I+ L+ G
Sbjct: 61 IEKV-VGKQGVQSLILAPTRELAMQVAEQLREFSRGQGVQVVTVFGGMPIERQIKALKKG 119
Query: 526 VHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVF-KMLSADVXVI 702
+VVGTPGRV D + RR L + I +LDEADEM++ GF D + + K+ + +
Sbjct: 120 PQIVVGTPGRVIDHLNRRTLKTDGIHTLILDEADEMMNMGFIDDMRFIMDKIPAVQRQTM 179
Query: 703 LLSATMP 723
L SATMP
Sbjct: 180 LFSATMP 186
>UniRef50_P38712 Cluster: ATP-dependent rRNA helicase RRP3; n=6;
Ascomycota|Rep: ATP-dependent rRNA helicase RRP3 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 501
Score = 133 bits (321), Expect = 5e-30
Identities = 69/198 (34%), Positives = 112/198 (56%), Gaps = 2/198 (1%)
Frame = +1
Query: 145 DTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKT 324
+T+ D+ E+F ++NL EL++ + KP+ IQ +AI P ++G D+I AQ+G+GKT
Sbjct: 73 NTNEDESFESFSELNLVPELIQACKNLNYSKPTPIQSKAIPPALEGHDIIGLAQTGSGKT 132
Query: 325 ATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVRED 504
A F+I IL ++ A ILAPTRELAQQI++ +LG + + +GG N+ +
Sbjct: 133 AAFAIPILNRLWHDQEPYYACILAPTRELAQQIKETFDSLGSLMGVRSTCIVGGMNMMDQ 192
Query: 505 IRQLESGVHVVVGTPGRVYDMI-TRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKML 681
R L H+++ TPGR+ D + + +K V+DEAD +L F + + K++
Sbjct: 193 ARDLMRKPHIIIATPGRLMDHLENTKGFSLRKLKFLVMDEADRLLDMEFGPVLDRILKII 252
Query: 682 -SADVXVILLSATMPDDV 732
+ + L SATM +
Sbjct: 253 PTQERTTYLFSATMTSKI 270
>UniRef50_A6VTY7 Cluster: DEAD/DEAH box helicase domain protein;
n=48; root|Rep: DEAD/DEAH box helicase domain protein -
Marinomonas sp. MWYL1
Length = 463
Score = 132 bits (320), Expect = 7e-30
Identities = 67/194 (34%), Positives = 113/194 (58%), Gaps = 4/194 (2%)
Frame = +1
Query: 172 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 351
+F+ + L +L+ I G+ +PSAIQ +AI ++G+DV+A AQ+GTGKTA F++ +L+
Sbjct: 6 SFNKLGLSAPILKAIEDQGYTEPSAIQAQAIPAILEGQDVMAAAQTGTGKTAGFTLPLLE 65
Query: 352 QI----DTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLE 519
+ + + +AL+L PTRELA Q+ + V G HL+ K GG + + L
Sbjct: 66 ILSKGENAQSNQVRALVLTPTRELAAQVAESVKNYGQHLSLKSTVVFGGVKINPQMMALR 125
Query: 520 SGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVXV 699
G +++ TPGR+ D+ ++A+ + +++ VLDEAD ML GF I + +L
Sbjct: 126 RGADILIATPGRMMDLYNQKAVRFDKLEVLVLDEADRMLDMGFIHDIKKILAILPKKRQN 185
Query: 700 ILLSATMPDDVLEV 741
+L SAT ++ ++
Sbjct: 186 LLFSATFSPEIRQL 199
>UniRef50_Q9P9G7 Cluster: DEAD-box RNA helicase; n=3;
Methanosarcinaceae|Rep: DEAD-box RNA helicase -
Methanococcoides burtonii
Length = 522
Score = 132 bits (320), Expect = 7e-30
Identities = 69/189 (36%), Positives = 108/189 (57%)
Frame = +1
Query: 166 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 345
+E+F + +++ +LR I FE+P+ IQ+ AI ++G+D+I A +G+GKT F I
Sbjct: 1 MESFKKLGIEDAILRSIEDKKFEEPTEIQKMAIPLILEGKDIIGGAATGSGKTLAFGCGI 60
Query: 346 LQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESG 525
+Q+I+ +AL+L PTRELA+Q+Q + H + GG + IRQLE
Sbjct: 61 IQKIEKG-NGIRALVLTPTRELAEQVQNSLKEFSRHKQLRVAPIYGGVAINPQIRQLERA 119
Query: 526 VHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVXVIL 705
VVV TPGR+ D I R + +++ VLDEAD ML GF D + ++ +D ++
Sbjct: 120 -DVVVATPGRLLDHIERGTIDLGDVEILVLDEADRMLDMGFIDDVEEIIDECPSDRQTMM 178
Query: 706 LSATMPDDV 732
SAT+ D+
Sbjct: 179 FSATVSKDI 187
>UniRef50_Q81QF0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=25; Firmicutes|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Bacillus anthracis
Length = 450
Score = 132 bits (318), Expect = 1e-29
Identities = 70/190 (36%), Positives = 108/190 (56%), Gaps = 1/190 (0%)
Frame = +1
Query: 166 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 345
++ F ++ + E + G + + IQ++AI + G+D+I QA++GTGKT F + I
Sbjct: 4 LKNFLELGISETFNHTLRENGITEATPIQEKAIPVILSGKDIIGQAKTGTGKTLAFVLPI 63
Query: 346 LQQIDTSIRECQALILAPTRELAQQI-QKVVIALGDHLNAKCHACIGGTNVREDIRQLES 522
L++ID + QALI+APTRELA QI ++ L + A GG +V + +R+L+
Sbjct: 64 LEKIDPESSDVQALIVAPTRELALQITTEIKKMLVQREDINVLAIYGGQDVAQQLRKLKG 123
Query: 523 GVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVXVI 702
H+VV TPGR+ D I R + + + VLDEAD+ML GF I D+ +
Sbjct: 124 NTHIVVATPGRLLDHIRRETIDLSNLSTIVLDEADQMLYFGFLYDIEDILDETPGSKQTM 183
Query: 703 LLSATMPDDV 732
L SAT+P D+
Sbjct: 184 LFSATIPKDI 193
>UniRef50_Q6D2K3 Cluster: ATP-independent RNA helicase; n=6;
Proteobacteria|Rep: ATP-independent RNA helicase -
Erwinia carotovora subsp. atroseptica (Pectobacterium
atrosepticum)
Length = 460
Score = 132 bits (318), Expect = 1e-29
Identities = 70/191 (36%), Positives = 107/191 (56%), Gaps = 1/191 (0%)
Frame = +1
Query: 172 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 351
+F + L E L + G+ + + +Q + + G DV A+A++G+GKTA F I +L
Sbjct: 5 SFSSLALPAEQLSNLNELGYTEMTPVQAATLPAVLSGADVRAKAKTGSGKTAAFGIGLLD 64
Query: 352 QIDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNVREDIRQLESGV 528
+I S QAL+L PTRELA Q+ K + L N K GG + + + L
Sbjct: 65 RIVVSDFTTQALVLCPTRELADQVSKELRRLARFAQNIKILTLCGGQPMGQQLDSLVHAP 124
Query: 529 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVXVILL 708
H+VVGTPGR+ D + +++L +++K+ VLDEAD ML GF D I DV +D +L
Sbjct: 125 HIVVGTPGRIQDHLRKQSLALDSLKVLVLDEADRMLDMGFTDAIDDVISYTPSDRQTLLF 184
Query: 709 SATMPDDVLEV 741
SAT P ++ ++
Sbjct: 185 SATYPQEIEQI 195
>UniRef50_Q4FSS4 Cluster: Possible ATP-dependent DEAD/DEAH box
RNA-helicase; n=4; Gammaproteobacteria|Rep: Possible
ATP-dependent DEAD/DEAH box RNA-helicase - Psychrobacter
arcticum
Length = 567
Score = 132 bits (318), Expect = 1e-29
Identities = 74/191 (38%), Positives = 107/191 (56%), Gaps = 4/191 (2%)
Frame = +1
Query: 157 DQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFS 336
D+ TF D+N+ + +L + G+ P+ IQ AI +QGRD++ AQ+G+GKTA F
Sbjct: 40 DENKVTFTDLNIAKPILSALERSGYTHPTPIQAEAIPFALQGRDLLLSAQTGSGKTAAFV 99
Query: 337 ISILQQID--TSIREC-QALILAPTRELAQQIQKVVIALGDHLNAK-CHACIGGTNVRED 504
I +L ++ TS + +ALIL PTRELAQQ+ V + C +GG
Sbjct: 100 IPVLDRLSRATSFDKLTKALILTPTRELAQQVHDSVRTYSKDMRGLFCVPLVGGAPYNGQ 159
Query: 505 IRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLS 684
I L+ GV V+V TPGR+ D I + +++++ VLDEAD ML GF D I D+ +
Sbjct: 160 ITALKKGVQVIVATPGRLLDHINAGRVDLSSLEILVLDEADRMLDMGFADDISDILRAAP 219
Query: 685 ADVXVILLSAT 717
D I+ SAT
Sbjct: 220 IDRQTIMCSAT 230
>UniRef50_Q13838 Cluster: Spliceosome RNA helicase BAT1; n=55;
Eukaryota|Rep: Spliceosome RNA helicase BAT1 - Homo
sapiens (Human)
Length = 428
Score = 132 bits (318), Expect = 1e-29
Identities = 72/192 (37%), Positives = 109/192 (56%), Gaps = 3/192 (1%)
Frame = +1
Query: 175 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 354
F D LK ELLR I GFE PS +Q I I G DV+ QA+SG GKTA F ++ LQQ
Sbjct: 47 FRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQ 106
Query: 355 IDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNVREDIRQLESGV- 528
++ + L++ TRELA QI K ++ N K GG ++++D L+
Sbjct: 107 LEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCP 166
Query: 529 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSR-GFKDQIHDVFKMLSADVXVIL 705
H+VVGTPGR+ + ++L+ IK F+LDE D+ML + + + ++F+M + V++
Sbjct: 167 HIVVGTPGRILALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMM 226
Query: 706 LSATMPDDVLEV 741
SAT+ ++ V
Sbjct: 227 FSATLSKEIRPV 238
>UniRef50_Q96GQ7 Cluster: Probable ATP-dependent RNA helicase DDX27;
n=34; Bilateria|Rep: Probable ATP-dependent RNA helicase
DDX27 - Homo sapiens (Human)
Length = 796
Score = 132 bits (318), Expect = 1e-29
Identities = 73/212 (34%), Positives = 119/212 (56%), Gaps = 6/212 (2%)
Frame = +1
Query: 124 GMDPGTLDTDWDQVVE--TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIA 297
G + G D Q E +F DMNL LL+ I A GF++P+ IQ+ I + G+D+ A
Sbjct: 201 GQEAGGFFEDASQYDENLSFQDMNLSRPLLKAITAMGFKQPTPIQKACIPVGLLGKDICA 260
Query: 298 QAQSGTGKTATFSISILQQIDTSIREC---QALILAPTRELAQQIQKVVIALGDHLNAKC 468
A +GTGKTA F++ +L+++ R+ + L+L PTREL Q+ V L N
Sbjct: 261 CAATGTGKTAAFALPVLERLIYKPRQAPVTRVLVLVPTRELGIQVHSVTRQLAQFCNITT 320
Query: 469 HACIGGTNVREDIRQLESGVHVVVGTPGRVYDMITR-RALHANTIKLFVLDEADEMLSRG 645
+GG +V+ L + +++ TPGR+ D + + H ++I++ +LDEAD ML
Sbjct: 321 CLAVGGLDVKSQEAALRAAPDILIATPGRLIDHLHNCPSFHLSSIEVLILDEADRMLDEY 380
Query: 646 FKDQIHDVFKMLSADVXVILLSATMPDDVLEV 741
F++Q+ ++ +M S +L SATM D+V ++
Sbjct: 381 FEEQMKEIIRMCSHHRQTMLFSATMTDEVKDL 412
>UniRef50_Q6MBR0 Cluster: Putative ATP-dependent RNA helicase; n=1;
Candidatus Protochlamydia amoebophila UWE25|Rep:
Putative ATP-dependent RNA helicase - Protochlamydia
amoebophila (strain UWE25)
Length = 407
Score = 131 bits (317), Expect = 2e-29
Identities = 74/184 (40%), Positives = 108/184 (58%), Gaps = 1/184 (0%)
Frame = +1
Query: 175 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGR-DVIAQAQSGTGKTATFSISILQ 351
F NL +L+ + F++PS IQ AI P IQ + D+IA +Q+G+GKTAT +I I
Sbjct: 17 FITFNLDPLILKALDKMNFKEPSRIQTEAI-PLIQKKQDLIALSQTGSGKTATCAIPICN 75
Query: 352 QIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVH 531
+++T + + QALI+ PTRELA Q +G + K A GG + +L+ GV
Sbjct: 76 RVNTELTDIQALIIVPTRELALQYATETQKIGKYKGVKAFAIFGGEDSALQQSKLKHGVQ 135
Query: 532 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVXVILLS 711
V+V TPGR+ D I R + + ++ +LDEADEMLS GF D + + + L+ +L S
Sbjct: 136 VLVATPGRLIDFIYSRQIDLSHVETLILDEADEMLSMGFYDDLVFIIQCLNHSHQTLLFS 195
Query: 712 ATMP 723
ATMP
Sbjct: 196 ATMP 199
>UniRef50_Q28T45 Cluster: DEAD/DEAH box helicase-like protein; n=18;
Alphaproteobacteria|Rep: DEAD/DEAH box helicase-like
protein - Jannaschia sp. (strain CCS1)
Length = 644
Score = 131 bits (317), Expect = 2e-29
Identities = 72/197 (36%), Positives = 111/197 (56%), Gaps = 3/197 (1%)
Frame = +1
Query: 151 DWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTAT 330
DW + TF D++L ++ + I G+E P+ IQ AI P + GRDV+ AQ+GTGKTA+
Sbjct: 6 DWTPMT-TFADLDLNPKVQKAIVEAGYESPTPIQAGAIPPALAGRDVLGIAQTGTGKTAS 64
Query: 331 FS---ISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVRE 501
F+ I++L + R ++L+L PTRELA Q+ + H+ IGG + +E
Sbjct: 65 FTLPMITMLARGRARARMPRSLVLCPTRELAAQVAENFDIYAKHVKLTKALLIGGVSFKE 124
Query: 502 DIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKML 681
+ ++ GV V++ TPGR+ D R L N +K+ V+DEAD ML GF I +F ++
Sbjct: 125 QEQAIDKGVDVLIATPGRLLDHFERGKLILNDVKVMVVDEADRMLDMGFIPDIERIFGLV 184
Query: 682 SADVXVILLSATMPDDV 732
+ SATM ++
Sbjct: 185 PFTRQTLFFSATMAPEI 201
>UniRef50_Q11TW3 Cluster: Possible ATP-dependent RNA helicase; n=5;
Bacteria|Rep: Possible ATP-dependent RNA helicase -
Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)
Length = 388
Score = 131 bits (317), Expect = 2e-29
Identities = 70/193 (36%), Positives = 119/193 (61%), Gaps = 6/193 (3%)
Frame = +1
Query: 172 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 351
+F + L +L+ + + P IQ++AI ++G+D++ AQ+G+GKTA+F + ILQ
Sbjct: 10 SFATLGLSPAILKALEKQFYNAPYPIQEQAIPAILKGKDILGIAQTGSGKTASFVLPILQ 69
Query: 352 QIDTSI----RECQALILAPTRELAQQIQKVVIALGDHL--NAKCHACIGGTNVREDIRQ 513
+ T R AL+L PTRELA Q+ +V A + L K A GG ++ + Q
Sbjct: 70 MLQTKPLGKNRHINALVLVPTRELAVQVGQVFQAFSNALPNKIKSLAVYGGVSINPQMIQ 129
Query: 514 LESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADV 693
L+ GV +++ TPGR+ D++ +A++ + +++ VLDEAD+ML+ GFK+++ ++FK+L
Sbjct: 130 LQ-GVEILIATPGRLLDLVDSKAVYLSDVEVLVLDEADKMLNLGFKEEMANIFKLLPQKR 188
Query: 694 XVILLSATMPDDV 732
+L SAT+ DV
Sbjct: 189 QNLLFSATLGKDV 201
>UniRef50_Q54TJ4 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 783
Score = 131 bits (317), Expect = 2e-29
Identities = 66/196 (33%), Positives = 115/196 (58%), Gaps = 4/196 (2%)
Frame = +1
Query: 157 DQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFS 336
++ + TF++++L LL+ + GF +P+ IQ +AI + G+D++A A +G+GKTA F
Sbjct: 186 EEELPTFEELHLSRPLLKAVQKLGFSQPTPIQAKAIPLALNGKDILASASTGSGKTAAFL 245
Query: 337 ISILQQI---DTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDI 507
+ +L+++ D+ R + LIL PTRELA Q Q V+ L N +GG + +
Sbjct: 246 LPVLERLLFRDSEYRAIRVLILLPTRELALQCQSVMENLAQFSNITSCLIVGGLSNKAQE 305
Query: 508 RQLESGVHVVVGTPGRVYD-MITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLS 684
+L VV+ TPGR+ D ++ + + +++ +LDEAD +L GFKD+I+ + +
Sbjct: 306 VELRKSPDVVIATPGRLIDHLLNAHGIGLDDLEILILDEADRLLDMGFKDEINKIVESCP 365
Query: 685 ADVXVILLSATMPDDV 732
+ +L SAT+ D+V
Sbjct: 366 TNRQTMLFSATLNDEV 381
>UniRef50_Q27268 Cluster: ATP-dependent RNA helicase WM6; n=82;
Eukaryota|Rep: ATP-dependent RNA helicase WM6 -
Drosophila melanogaster (Fruit fly)
Length = 424
Score = 131 bits (317), Expect = 2e-29
Identities = 73/193 (37%), Positives = 108/193 (55%), Gaps = 4/193 (2%)
Frame = +1
Query: 175 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 354
F D LK E+LR I GFE PS +Q I + G D++ QA+SG GKTA F ++ LQQ
Sbjct: 43 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 102
Query: 355 IDTSIRE-CQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNVREDIRQLESGV 528
++ S C L++ TRELA QI K ++ K GG +++D L+SG
Sbjct: 103 LEPSDNNTCHVLVMCHTRELAFQISKEYERFSKYMPTVKVAVFFGGMAIQKDEETLKSGT 162
Query: 529 -HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSR-GFKDQIHDVFKMLSADVXVI 702
H+VVGTPGR+ +I + L+ +K FVLDE D+ML + + + ++F+ V+
Sbjct: 163 PHIVVGTPGRILALIRNKKLNLKLLKHFVLDECDKMLEQLDMRRDVQEIFRSTPHGKQVM 222
Query: 703 LLSATMPDDVLEV 741
+ SAT+ D+ V
Sbjct: 223 MFSATLSKDIRPV 235
>UniRef50_O00148 Cluster: ATP-dependent RNA helicase DDX39; n=27;
Eukaryota|Rep: ATP-dependent RNA helicase DDX39 - Homo
sapiens (Human)
Length = 427
Score = 131 bits (317), Expect = 2e-29
Identities = 79/227 (34%), Positives = 119/227 (52%), Gaps = 4/227 (1%)
Frame = +1
Query: 73 DSKNGPSKDQGSYDGPPGMDPGTLDTDWDQVVET-FDDMNLKEELLRGIYAYGFEKPSAI 249
D + P Q S PP D + + + + F D LK ELLR I GFE PS +
Sbjct: 14 DEEEEPQAPQESTPAPPKKD---IKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEV 70
Query: 250 QQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQK 429
Q I I G DV+ QA+SG GKTA F ++ LQQI+ + L++ TRELA QI K
Sbjct: 71 QHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQIEPVNGQVTVLVMCHTRELAFQISK 130
Query: 430 VVIALGDHL-NAKCHACIGGTNVREDIRQLESGV-HVVVGTPGRVYDMITRRALHANTIK 603
++ + K GG ++++D L+ HVVVGTPGR+ ++ R+ +K
Sbjct: 131 EYERFSKYMPSVKVSVFFGGLSIKKDEEVLKKNCPHVVVGTPGRILALVRNRSFSLKNVK 190
Query: 604 LFVLDEADEMLSR-GFKDQIHDVFKMLSADVXVILLSATMPDDVLEV 741
FVLDE D+ML + + + ++F++ + ++ SAT+ D+ V
Sbjct: 191 HFVLDECDKMLEQLDMRRDVQEIFRLTPHEKQCMMFSATLSKDIRPV 237
>UniRef50_UPI0001509D93 Cluster: DEAD/DEAH box helicase family
protein; n=1; Tetrahymena thermophila SB210|Rep:
DEAD/DEAH box helicase family protein - Tetrahymena
thermophila SB210
Length = 476
Score = 131 bits (316), Expect = 2e-29
Identities = 70/190 (36%), Positives = 107/190 (56%), Gaps = 4/190 (2%)
Frame = +1
Query: 172 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 351
+F+D +LK++LLR + GFE+PS +Q + I I G+DV+ QA++GTGKTA F +S+L
Sbjct: 39 SFNDFSLKQDLLRSVKEAGFERPSEVQHQCIPNAIHGKDVLCQAKAGTGKTAVFVLSVLN 98
Query: 352 QIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLES-GV 528
Q+ + L+L TRELA QI+ LG N K A GG DI L++
Sbjct: 99 QLPDDAKPFSCLVLCHTRELAFQIKNEFKRLGKFTNFKVKAVYGGVEESVDIHTLKTKKP 158
Query: 529 HVVVGTPGRVYDMITRR--ALHANTIKLFVLDEADEMLSRG-FKDQIHDVFKMLSADVXV 699
H++V TPGR +I + + I+ F++DE D +LS + + ++F L V
Sbjct: 159 HILVATPGRCLSLIKAKPSVIETQNIEYFIIDECDRVLSSNKMRSDVQNIFYELPRKKQV 218
Query: 700 ILLSATMPDD 729
++ S TM D+
Sbjct: 219 MMFSGTMSDE 228
>UniRef50_Q0LVA0 Cluster: Helicase-like:DEAD/DEAH box helicase-like;
n=7; Alphaproteobacteria|Rep: Helicase-like:DEAD/DEAH
box helicase-like - Caulobacter sp. K31
Length = 542
Score = 131 bits (316), Expect = 2e-29
Identities = 71/191 (37%), Positives = 107/191 (56%), Gaps = 5/191 (2%)
Frame = +1
Query: 175 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 354
F D+ L + LL+ + G+ P+ IQ +AI + GRD++ AQ+GTGKTA F++ IL +
Sbjct: 67 FTDLGLAKPLLKALTDKGYTVPTPIQAQAIPLVMSGRDLLGIAQTGTGKTAAFALPILHR 126
Query: 355 I-----DTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLE 519
+ R + L+L+PTRELA QI + G H+ GG ++ L
Sbjct: 127 LAEDKKPAPRRGFRCLVLSPTRELATQIAESFRDYGKHMGLTVATIFGGVKYGPQMKALA 186
Query: 520 SGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVXV 699
+GV VVV TPGR+ D + ++ H N +++FVLDEAD+ML GF I + L +
Sbjct: 187 AGVDVVVATPGRLMDHLGEKSAHLNGVEIFVLDEADQMLDLGFVVPIRKIASQLPKERQN 246
Query: 700 ILLSATMPDDV 732
+ SATMP ++
Sbjct: 247 LFFSATMPSEI 257
>UniRef50_Q0C4R1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=1; Hyphomonas neptunium ATCC 15444|Rep:
ATP-dependent RNA helicase, DEAD/DEAH box family -
Hyphomonas neptunium (strain ATCC 15444)
Length = 708
Score = 131 bits (316), Expect = 2e-29
Identities = 73/194 (37%), Positives = 116/194 (59%), Gaps = 11/194 (5%)
Frame = +1
Query: 184 MNLKEEL---LRG-IYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 351
MNL E L LR I+ G+E + +Q A P ++GRD++ A++G+GKT F ++I
Sbjct: 1 MNLPETLPAALRAAIHERGYETLTEVQAAATAPELEGRDLLVSARTGSGKTVAFGLAIAN 60
Query: 352 QI----DTSIRECQA---LILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIR 510
++ DT + LI+APTRELA Q+ + + L + NA+ C+GG ++R++ R
Sbjct: 61 ELLGGEDTFLIRAATPLGLIIAPTRELALQVARELRWLYANTNAEIATCVGGMDMRDERR 120
Query: 511 QLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSAD 690
LE G H+VVGTPGR+ D I R + + I+ VLDEADEML GF++++ + + +
Sbjct: 121 ALERGAHIVVGTPGRLVDHINRGSFDTSAIRAVVLDEADEMLDLGFREELELILEDTPKE 180
Query: 691 VXVILLSATMPDDV 732
++ SAT+P +
Sbjct: 181 RRTLMFSATVPKGI 194
>UniRef50_A6Q8Y9 Cluster: ATP-dependent RNA helicase, DEAD-box
family; n=6; Bacteria|Rep: ATP-dependent RNA helicase,
DEAD-box family - Sulfurovum sp. (strain NBC37-1)
Length = 492
Score = 131 bits (316), Expect = 2e-29
Identities = 69/186 (37%), Positives = 105/186 (56%)
Frame = +1
Query: 175 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 354
F D NLK+ + + GF++PS +Q+ AI ++G D+IAQAQ+GTGKTA F + I+
Sbjct: 3 FTDFNLKDTIQAAVAEAGFKEPSPVQKDAIPLVLEGHDMIAQAQTGTGKTAAFGLPIMSM 62
Query: 355 IDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHV 534
+ + L++ PTRELA Q+ + G K GGT + I +++ +
Sbjct: 63 MKAD-GSVEGLVIVPTRELAMQVSDELFRFGKLSGLKTATVYGGTAYGKQIERIKQ-ASI 120
Query: 535 VVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVXVILLSA 714
VV TPGR+ D++ + N VLDEADEML GF D+I ++F L + ++ SA
Sbjct: 121 VVATPGRLQDLLMSGKIKLNP-HFVVLDEADEMLDMGFLDEIKNIFTFLPKERQTLMFSA 179
Query: 715 TMPDDV 732
TMP+ +
Sbjct: 180 TMPNGI 185
>UniRef50_A0RP33 Cluster: Putative ATP-dependent RNA helicase RhlE;
n=1; Campylobacter fetus subsp. fetus 82-40|Rep:
Putative ATP-dependent RNA helicase RhlE - Campylobacter
fetus subsp. fetus (strain 82-40)
Length = 624
Score = 131 bits (316), Expect = 2e-29
Identities = 70/194 (36%), Positives = 108/194 (55%), Gaps = 5/194 (2%)
Frame = +1
Query: 175 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 354
F D +L +L + ++ P+ IQQ AI +QG+D++A A++GTGKTA F++ IL++
Sbjct: 3 FSDFDLSSAILEALKELNYDAPTQIQQVAIPAIMQGKDILAGARTGTGKTAAFALPILEK 62
Query: 355 IDTSIR-----ECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLE 519
+ + R + + L+L PTRELA Q+ + + + L K GG + I+ L+
Sbjct: 63 LSSKERNKKRPQTRVLVLVPTRELANQVTQNIKSYAKKLPFKTLPVFGGVSSYPQIQALK 122
Query: 520 SGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVXV 699
SG+ +VV TPGR+ D+ + AL I V DEAD M GF I + KML
Sbjct: 123 SGIDIVVATPGRLLDLALQNALSLEHIDTLVFDEADRMFDMGFIHDIKQIVKMLPEKRQN 182
Query: 700 ILLSATMPDDVLEV 741
+L SAT P +V+ +
Sbjct: 183 LLFSATYPSEVMSL 196
>UniRef50_UPI00015BD198 Cluster: UPI00015BD198 related cluster; n=1;
unknown|Rep: UPI00015BD198 UniRef100 entry - unknown
Length = 364
Score = 130 bits (315), Expect = 3e-29
Identities = 63/182 (34%), Positives = 113/182 (62%), Gaps = 1/182 (0%)
Frame = +1
Query: 190 LKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSI 369
L EL + + G+++P+ IQ+ AI ++G D++ QA +GTGKT F+I I++++
Sbjct: 7 LSLELQKALEDAGYKEPTPIQRDAIPLALEGYDILGQAATGTGKTGAFAIPIVEKLQKGK 66
Query: 370 RECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLES-GVHVVVGT 546
+ +AL+L PTRELA Q+++ + L + + GGT+V++++ L++ V +++GT
Sbjct: 67 PDVKALVLTPTRELAIQVKEQIYMLTKYKRLSSYVFYGGTSVKQNLDILQNKNVDILIGT 126
Query: 547 PGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVXVILLSATMPD 726
PGR+ D+I R+AL+ + ++ VLDE D+ML GF + I + L + + SAT+P
Sbjct: 127 PGRIKDLIDRKALNLSKVEYLVLDEFDQMLDMGFIEDIEYIISFLPKERTTYMFSATVPS 186
Query: 727 DV 732
+
Sbjct: 187 RI 188
>UniRef50_Q7MT81 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=9; Bacteroidales|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Porphyromonas
gingivalis (Bacteroides gingivalis)
Length = 427
Score = 130 bits (315), Expect = 3e-29
Identities = 72/192 (37%), Positives = 109/192 (56%), Gaps = 6/192 (3%)
Frame = +1
Query: 175 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 354
FD++NL +E+L G+ A F + + +Q I P ++GRDVIA AQ+GTGKTA + + IL +
Sbjct: 3 FDELNLGDEVLDGLDAMNFIETTPVQAATIPPILEGRDVIACAQTGTGKTAAYLLPILDR 62
Query: 355 I---DTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTN---VREDIRQL 516
+ + + A+I+APTRELAQQI + V + A GGT+ + R +
Sbjct: 63 LSAGEFASDVVNAVIMAPTRELAQQIDQQVEGFSYFMPVSAVAIYGGTDGVAWEQQRRGM 122
Query: 517 ESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVX 696
G +V+ TPGR+ + + + + FVLDEAD ML GF D I ++K L +
Sbjct: 123 AMGADIVIATPGRLISHLNLGSADLSHVSYFVLDEADRMLDMGFFDDIMQIYKQLPSSCQ 182
Query: 697 VILLSATMPDDV 732
++ SATMP +
Sbjct: 183 TVMFSATMPPKI 194
>UniRef50_Q3AZR1 Cluster: DEAD/DEAH box helicase-like; n=2;
Synechococcus|Rep: DEAD/DEAH box helicase-like -
Synechococcus sp. (strain CC9902)
Length = 458
Score = 130 bits (315), Expect = 3e-29
Identities = 67/186 (36%), Positives = 109/186 (58%), Gaps = 4/186 (2%)
Frame = +1
Query: 172 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 351
TF+ + L E +R I G+ P+ IQ I +QG+D++A AQ+GTGKTA F + I++
Sbjct: 25 TFEQLELCAETVRSIKESGYLSPTPIQALTIPEVLQGKDIMASAQTGTGKTAAFILPIIE 84
Query: 352 QIDTSIR----ECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLE 519
+ + + +L+L PTRELA Q++ A +L + A GG ++R +++L+
Sbjct: 85 LLRAEDKPKRYQVHSLVLTPTRELAAQVEASAKAYTKYLALRSDAVFGGVSIRPQVKRLQ 144
Query: 520 SGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVXV 699
GV ++V TPGR+ D+I ++ + + +K+ VLDEAD ML GF I V + L +
Sbjct: 145 GGVDILVATPGRLLDLINQKMIRFDNLKVLVLDEADRMLDMGFIRDIKKVIEYLPKNRQN 204
Query: 700 ILLSAT 717
++ SAT
Sbjct: 205 MMFSAT 210
>UniRef50_Q1VL45 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Psychroflexus torquis ATCC 700755|Rep: DEAD/DEAH box
helicase-like protein - Psychroflexus torquis ATCC
700755
Length = 255
Score = 130 bits (315), Expect = 3e-29
Identities = 70/188 (37%), Positives = 107/188 (56%)
Frame = +1
Query: 175 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 354
FD L + L G+ G+E + +Q+ + QG DVI QA++G+GKTA F + IL++
Sbjct: 7 FDSWELPDALRTGLAQLGWEFATQVQRDTVPIARQGTDVIGQARTGSGKTAAFGLPILER 66
Query: 355 IDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHV 534
S + QAL+LAPTRELA Q+ + L + GGT++ + + L GV +
Sbjct: 67 CQPS-GKLQALVLAPTRELANQVAQEFELLQGNAGLSIVTVYGGTDLEKQAKTLAKGVDI 125
Query: 535 VVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVXVILLSA 714
+VGTPGRV DM R + N+ K+ LDEAD ML GF I + + +++ +L SA
Sbjct: 126 IVGTPGRVMDMNERGHIDLNSPKMLCLDEADRMLDMGFFPDIMWIVERMTSRQQTLLFSA 185
Query: 715 TMPDDVLE 738
T P ++++
Sbjct: 186 TFPQEIID 193
>UniRef50_Q4Q2Z6 Cluster: ATP-dependent RNA helicase, putative; n=7;
Trypanosomatidae|Rep: ATP-dependent RNA helicase,
putative - Leishmania major
Length = 803
Score = 130 bits (315), Expect = 3e-29
Identities = 72/190 (37%), Positives = 107/190 (56%), Gaps = 2/190 (1%)
Frame = +1
Query: 175 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 354
F NL++ LL I GF P+ IQ++AI P +QG DV+A A++G+GKTA F I +L
Sbjct: 24 FQSFNLEKPLLDAILKQGFSVPTPIQRKAIPPMLQGNDVVAMARTGSGKTAAFLIPMLNT 83
Query: 355 IDT--SIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGV 528
+ I + L+L+PTREL+ QI + AL L+ + A +GG ++ + L S
Sbjct: 84 LKAHAKIVGIRGLVLSPTRELSLQILRNGFALNKFLDLRFAALVGGDSMDQQFELLASNP 143
Query: 529 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVXVILL 708
VVV TPGR+ ++ +LH +++ VLDEAD + G + QI + + L L
Sbjct: 144 DVVVATPGRLLHIMEEASLHLTSVRCLVLDEADRLFELGLQPQIGAIMQKLPESCQRALF 203
Query: 709 SATMPDDVLE 738
SATMP + E
Sbjct: 204 SATMPTVLAE 213
>UniRef50_Q9LUW5 Cluster: DEAD-box ATP-dependent RNA helicase 53;
n=14; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 53 - Arabidopsis thaliana (Mouse-ear cress)
Length = 616
Score = 130 bits (315), Expect = 3e-29
Identities = 71/187 (37%), Positives = 111/187 (59%), Gaps = 6/187 (3%)
Frame = +1
Query: 181 DMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQI- 357
++ + E+++ + + G EK IQ+ + P ++GRD+I +A++GTGKT F I I+ +I
Sbjct: 108 ELGISPEIVKALSSKGIEKLFPIQKAVLEPAMEGRDMIGRARTGTGKTLAFGIPIIDKII 167
Query: 358 -----DTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLES 522
R L+LAPTRELA+Q++K L+ C GGT + + +RQL+
Sbjct: 168 KYNAKHGRGRNPLCLVLAPTRELARQVEKEFRESAPSLDTIC--LYGGTPIGQQMRQLDY 225
Query: 523 GVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVXVI 702
GV V VGTPGRV D++ R AL+ + ++ VLDEAD+ML GF + + + + L +
Sbjct: 226 GVDVAVGTPGRVIDLMKRGALNLSEVQFVVLDEADQMLQVGFAEDVEIILEKLPEKRQSM 285
Query: 703 LLSATMP 723
+ SATMP
Sbjct: 286 MFSATMP 292
>UniRef50_Q3EBD3 Cluster: DEAD-box ATP-dependent RNA helicase 41;
n=6; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 41 - Arabidopsis thaliana (Mouse-ear cress)
Length = 505
Score = 130 bits (315), Expect = 3e-29
Identities = 72/200 (36%), Positives = 115/200 (57%), Gaps = 8/200 (4%)
Frame = +1
Query: 166 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 345
V TF L +LL + G++ P+ IQ +AI + G+ ++A A +G+GKTA+F + I
Sbjct: 109 VLTFTSCGLPPKLLLNLETAGYDFPTPIQMQAIPAALTGKSLLASADTGSGKTASFLVPI 168
Query: 346 LQQIDT--------SIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVRE 501
+ + T R A++LAPTREL Q++ LG L K +GG +
Sbjct: 169 ISRCTTYHSEHPSDQRRNPLAMVLAPTRELCVQVEDQAKMLGKGLPFKTALVVGGDPMSG 228
Query: 502 DIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKML 681
+ +++ GV +++GTPGRV D++++ + + I FVLDE D ML RGF+DQ+ +F+ L
Sbjct: 229 QLYRIQQGVELIIGTPGRVVDLLSKHTIELDNIMTFVLDEVDCMLQRGFRDQVMQIFQAL 288
Query: 682 SADVXVILLSATMPDDVLEV 741
S V+L SAT+ +V +V
Sbjct: 289 S-QPQVLLFSATISREVEKV 307
>UniRef50_Q17BP5 Cluster: DEAD box ATP-dependent RNA helicase; n=2;
Culicidae|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 1061
Score = 130 bits (314), Expect = 4e-29
Identities = 73/196 (37%), Positives = 114/196 (58%), Gaps = 1/196 (0%)
Frame = +1
Query: 133 PGTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSG 312
P T D ++D ++ F M L E +LRG+ F PS IQ RAI G D++ QA+SG
Sbjct: 11 PRTADVEFDLSLQ-FSKMFLSEPVLRGLTRNNFTHPSPIQARAIPLAKLGLDLLVQAKSG 69
Query: 313 TGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGT 489
TGKT F++ I + + + Q+L + PTRE+A QI+ V+ +G + N + + IGG
Sbjct: 70 TGKTLVFTVLITENHNPDVMFPQSLTVVPTREIAVQIEDVLNRIGYSVPNFRAKSFIGGL 129
Query: 490 NVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDV 669
++ +D + L+S VVGTPGR+ +I L+ + IK+ VLDEAD +++ K ++ +
Sbjct: 130 DISQDRKNLQS-CSAVVGTPGRINHLIKSNVLNTSQIKILVLDEADSLITGSLKPEVDQI 188
Query: 670 FKMLSADVXVILLSAT 717
KML ++ SAT
Sbjct: 189 VKMLPTKRQTVVCSAT 204
>UniRef50_UPI0000DB7226 Cluster: PREDICTED: similar to Probable
ATP-dependent RNA helicase DDX20 (DEAD box protein 20)
(DEAD box protein DP 103) (Component of gems 3)
(Gemin-3); n=1; Apis mellifera|Rep: PREDICTED: similar
to Probable ATP-dependent RNA helicase DDX20 (DEAD box
protein 20) (DEAD box protein DP 103) (Component of gems
3) (Gemin-3) - Apis mellifera
Length = 648
Score = 130 bits (313), Expect = 5e-29
Identities = 72/184 (39%), Positives = 107/184 (58%), Gaps = 1/184 (0%)
Frame = +1
Query: 184 MNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDT 363
M +++L G+ GF++PS IQ +AI G D+I +A+SGTGKT F I L+ ID
Sbjct: 1 MGFSQKILDGLSVCGFQRPSPIQLKAIPLGRCGFDLIMRAKSGTGKTLVFCIISLEMIDI 60
Query: 364 SIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNVREDIRQLESGVHVVV 540
I Q LILAPTRE+A QI +V ++G + + K IGG + D +++ + + V
Sbjct: 61 DISSVQVLILAPTREIAVQIAQVFSSVGCEIKDLKVEVFIGGLAIENDKKKV-NNCQIAV 119
Query: 541 GTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVXVILLSATM 720
G PGR+ +I + L ++LFVLDEAD+++ F+ I+ +F L VI SAT
Sbjct: 120 GAPGRIRHLIDKGFLKVENVRLFVLDEADKLMETSFQKDINYIFSKLPLSKQVIASSATY 179
Query: 721 PDDV 732
P D+
Sbjct: 180 PGDL 183
>UniRef50_Q2BP56 Cluster: Putative ATP-dependent RNA helicase; n=1;
Neptuniibacter caesariensis|Rep: Putative ATP-dependent
RNA helicase - Neptuniibacter caesariensis
Length = 427
Score = 130 bits (313), Expect = 5e-29
Identities = 68/191 (35%), Positives = 114/191 (59%), Gaps = 4/191 (2%)
Frame = +1
Query: 172 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 351
+F ++ L EL + G+E+P+ IQ +AI ++G D++A+AQ+GTGKTA+F++ I++
Sbjct: 5 SFAELALCPELQFTLKNLGYEQPTPIQSQAIPLVLRGDDLLAEAQTGTGKTASFALPIIE 64
Query: 352 QIDTS----IRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLE 519
++ + R +AL+LAPTRELA Q+ + G L + + GG V I++L+
Sbjct: 65 KLSKNPIDGYRPVRALVLAPTRELAIQVADNTLEYGRDLGMRVISVYGGVPVENQIKRLK 124
Query: 520 SGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVXV 699
G ++V TPGR+ D++ ++A+ ++ VLDEAD ML GF D I + + D
Sbjct: 125 RGTDILVATPGRLLDLLRQKAISLEKLEYLVLDEADRMLDLGFIDPIQKIMDYAADDRQT 184
Query: 700 ILLSATMPDDV 732
+L +AT + V
Sbjct: 185 LLFTATADESV 195
>UniRef50_P0C2N8 Cluster: ATP-dependent RNA helicase drs-1; n=16;
Fungi/Metazoa group|Rep: ATP-dependent RNA helicase
drs-1 - Neurospora crassa
Length = 829
Score = 130 bits (313), Expect = 5e-29
Identities = 70/193 (36%), Positives = 109/193 (56%), Gaps = 4/193 (2%)
Frame = +1
Query: 166 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 345
+ +F +M+L +LRG+ + GF KP+ IQ + I + G+DV+ A +G+GKTA F + I
Sbjct: 292 MSSFQEMSLSRPILRGLTSVGFTKPTPIQAKTIPISLMGKDVVGGAVTGSGKTAAFVVPI 351
Query: 346 LQQI---DTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQL 516
L+++ + + +IL PTRELA Q V + L H + K +GG +++ +L
Sbjct: 352 LERLLYRPKKVPTTRVVILTPTRELAIQCHAVAVKLASHTDIKFCLAVGGLSLKVQEAEL 411
Query: 517 ESGVHVVVGTPGRVYDMITRRALHA-NTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADV 693
VV+ TPGR D + A A +TI++ VLDEAD ML GF D+++++ L
Sbjct: 412 RLRPDVVIATPGRFIDHMRNSASFAVDTIEILVLDEADRMLEDGFADELNEILTTLPKSR 471
Query: 694 XVILLSATMPDDV 732
+L SATM V
Sbjct: 472 QTMLFSATMTSSV 484
>UniRef50_Q2BMZ1 Cluster: ATP-dependent RNA helicase; n=1;
Neptuniibacter caesariensis|Rep: ATP-dependent RNA
helicase - Neptuniibacter caesariensis
Length = 417
Score = 129 bits (312), Expect = 6e-29
Identities = 69/196 (35%), Positives = 111/196 (56%), Gaps = 6/196 (3%)
Frame = +1
Query: 172 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 351
+F + L + + + G+++P+AIQ +AI ++G D+IA A++G+GKTA F + +L+
Sbjct: 2 SFVSLGLSDFFTSTLSSLGYKEPTAIQDKAIPAVLKGHDLIAAAETGSGKTAGFVLPLLE 61
Query: 352 QIDT----SIRECQALILAPTRELAQQIQKVVIALGDHLNAKCH--ACIGGTNVREDIRQ 513
++ + AL+L PTRELA Q+ + V ++ K A GG + ++
Sbjct: 62 KLHSIPAPGNNLTHALVLVPTRELAVQVSQSVDRYSENCPRKIRSVAIYGGAAINPQMQS 121
Query: 514 LESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADV 693
L G +VV TPGR+ D++ + AL +K VLDEAD ML GF D++ D+ +V
Sbjct: 122 LSKGCDIVVATPGRLLDLMRKNALDLRGLKALVLDEADRMLDLGFADELDDILDQTPGNV 181
Query: 694 XVILLSATMPDDVLEV 741
+L SAT PD V E+
Sbjct: 182 QTLLFSATFPDKVKEL 197
>UniRef50_A1G315 Cluster: DEAD/DEAH box helicase-like; n=2;
Salinispora|Rep: DEAD/DEAH box helicase-like -
Salinispora arenicola CNS205
Length = 633
Score = 129 bits (312), Expect = 6e-29
Identities = 69/192 (35%), Positives = 107/192 (55%), Gaps = 4/192 (2%)
Frame = +1
Query: 172 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 351
TF ++ ++E + + A G + AIQ+ A+ ++G D+I QA +GTGKT F + +L+
Sbjct: 111 TFAELGARQETVDALAAAGITRAFAIQEYALPIALRGVDLIGQAPTGTGKTLGFGVPLLE 170
Query: 352 QI----DTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLE 519
Q+ + QAL++ PTREL Q+ K + A G + GG I L
Sbjct: 171 QVLAPAEGGDGTPQALVVVPTRELGIQVAKDLQAAGSTRGVRVLPIYGGVAYEPQIEALR 230
Query: 520 SGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVXV 699
SGV ++VGTPGR+ D+ ++ L + ++ VLDEAD ML GF D + + +L D
Sbjct: 231 SGVEILVGTPGRLLDLAKQKHLKLDRVRALVLDEADRMLDLGFLDDVERILAILPEDRQT 290
Query: 700 ILLSATMPDDVL 735
+L SATMPD ++
Sbjct: 291 MLFSATMPDPIV 302
>UniRef50_Q44NG9 Cluster: Helicase, C-terminal:DEAD/DEAH box
helicase, N-terminal; n=9; Bacteroidetes/Chlorobi
group|Rep: Helicase, C-terminal:DEAD/DEAH box helicase,
N-terminal - Chlorobium limicola DSM 245
Length = 499
Score = 128 bits (310), Expect = 1e-28
Identities = 69/191 (36%), Positives = 103/191 (53%), Gaps = 5/191 (2%)
Frame = +1
Query: 175 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 354
F + + E +L+ I G++ P+ IQ AI + G D++ AQ+GTGKTA F+I +LQ
Sbjct: 84 FRSLAIIEPILQAIEEEGYQTPTPIQAEAIPLILDGNDLLGCAQTGTGKTAAFAIPVLQL 143
Query: 355 IDT-----SIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLE 519
++ R+ ++LI+ PTRELA QI + A G H GG N L+
Sbjct: 144 LNAVKTNEKKRKIRSLIITPTRELAIQIGESFKAYGRHTGLTSTVIFGGVNQNPQTASLQ 203
Query: 520 SGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVXV 699
G+ +++ TPGR+ D++ + LH I+ FVLDEAD ML GF I + L
Sbjct: 204 KGIDILIATPGRLLDLMNQGHLHLRNIEFFVLDEADRMLDMGFIHDIRKILAELPKKKQS 263
Query: 700 ILLSATMPDDV 732
+ SATMP ++
Sbjct: 264 LFFSATMPPEI 274
>UniRef50_Q019E9 Cluster: ATP-dependent RNA helicase; n=2;
Ostreococcus|Rep: ATP-dependent RNA helicase -
Ostreococcus tauri
Length = 683
Score = 128 bits (310), Expect = 1e-28
Identities = 67/196 (34%), Positives = 113/196 (57%), Gaps = 8/196 (4%)
Frame = +1
Query: 178 DDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQI 357
D+ + E ++ + G + IQQ + P + G+DV+ +A++GTGKT FS+ +++++
Sbjct: 28 DNFGMSETTVQALRKRGVDALFPIQQAVLRPAMDGQDVVGRARTGTGKTLAFSLPVIEKL 87
Query: 358 DTS--------IRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQ 513
++ R + ++LAPTRELA+Q++ + L+ C GGT + + +
Sbjct: 88 LSNGRGSGGRGYRNPKCIVLAPTRELAKQVENEIFITAPTLDTAC--VYGGTPIGQQESK 145
Query: 514 LESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADV 693
L GV +VVGTPGR+ D++ RRAL + I+ VLDEAD+ML+ GF++ + + A
Sbjct: 146 LRRGVDIVVGTPGRIMDLMNRRALDLSEIEFVVLDEADQMLNVGFEEDVEAILHDCPAGR 205
Query: 694 XVILLSATMPDDVLEV 741
L SATMP V ++
Sbjct: 206 QTFLFSATMPQWVKQI 221
>UniRef50_Q0G0P8 Cluster: Superfamily II DNA and RNA helicase; n=2;
Aurantimonadaceae|Rep: Superfamily II DNA and RNA
helicase - Fulvimarina pelagi HTCC2506
Length = 457
Score = 128 bits (309), Expect = 1e-28
Identities = 72/192 (37%), Positives = 105/192 (54%), Gaps = 5/192 (2%)
Frame = +1
Query: 172 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 351
TFD L E L R + P+ IQ+RAI + GRD++ AQ+GTGKTA F++ +L
Sbjct: 5 TFDGFGLAEPLTRALARLELTTPTPIQERAIPHALAGRDMLGIAQTGTGKTAAFALPLLH 64
Query: 352 QIDT-----SIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQL 516
+ T + R +ALIL+PTRELA QI + + L + GG +VR I+ L
Sbjct: 65 HLMTVGGKPTTRTTKALILSPTRELAVQIAESIADLSEGTPISHCVVFGGVSVRPQIQAL 124
Query: 517 ESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVX 696
GV ++V TPGR+ D++ +RA+ + +LDEAD ML GF + + D
Sbjct: 125 ARGVDILVATPGRLLDLMEQRAIDLRETRHLILDEADRMLDMGFVRDVMKIVGKCPDDRQ 184
Query: 697 VILLSATMPDDV 732
++ SATMP +
Sbjct: 185 SMMFSATMPKPI 196
>UniRef50_Q8MZI3 Cluster: GH10652p; n=2; Drosophila
melanogaster|Rep: GH10652p - Drosophila melanogaster
(Fruit fly)
Length = 818
Score = 128 bits (309), Expect = 1e-28
Identities = 70/194 (36%), Positives = 106/194 (54%), Gaps = 5/194 (2%)
Frame = +1
Query: 175 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 354
F++ + ++ I GF KP+AIQ + + GRD++ AQ+G+GKT + + +
Sbjct: 159 FEEGGFPDYVMNEIRKQGFAKPTAIQAQGWPIAMSGRDLVGVAQTGSGKTLAYVLPAVVH 218
Query: 355 IDTSIRECQ-----ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLE 519
I+ R + AL+LAPTRELAQQIQ+V I G + + + GG + R LE
Sbjct: 219 INNQPRLERGDGPIALVLAPTRELAQQIQQVAIEFGSNTHVRNTCIFGGAPKGQQARDLE 278
Query: 520 SGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVXV 699
GV +V+ TPGR+ D + R VLDEAD ML GF+ QI + + + D V
Sbjct: 279 RGVEIVIATPGRLIDFLERGTTSLKRCTYLVLDEADRMLDMGFEPQIRKIMQQIRPDRQV 338
Query: 700 ILLSATMPDDVLEV 741
++ SAT P +V ++
Sbjct: 339 LMWSATWPKEVRQL 352
>UniRef50_Q17JB5 Cluster: DEAD box ATP-dependent RNA helicase; n=4;
Eukaryota|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 699
Score = 128 bits (309), Expect = 1e-28
Identities = 73/191 (38%), Positives = 100/191 (52%), Gaps = 5/191 (2%)
Frame = +1
Query: 175 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 354
F+ L + +L GF KP+AIQ + + + GRD++ AQ+G+GKT + L
Sbjct: 124 FEQGGLPDYILEEANKQGFSKPTAIQAQGMPIALSGRDMVGIAQTGSGKTLAYIAPALVH 183
Query: 355 I--DTSIRECQ---ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLE 519
I +R AL+LAPTRELAQQIQ+V G +NA GG IR LE
Sbjct: 184 ITHQDQLRRGDGPIALVLAPTRELAQQIQQVATDFGQRINANNTCVFGGAPKGPQIRDLE 243
Query: 520 SGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVXV 699
G +V+ TPGR+ D + R + VLDEAD ML GF+ QI + + D V
Sbjct: 244 RGAEIVIATPGRLIDFLERGITNLRRCTYLVLDEADRMLDMGFEPQIRKIMGQIRPDRQV 303
Query: 700 ILLSATMPDDV 732
++ SAT P +V
Sbjct: 304 LMWSATWPKEV 314
>UniRef50_Q5FS73 Cluster: ATP-dependent RNA helicase; n=2;
Gluconobacter oxydans|Rep: ATP-dependent RNA helicase -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 432
Score = 128 bits (308), Expect = 2e-28
Identities = 68/193 (35%), Positives = 106/193 (54%), Gaps = 5/193 (2%)
Frame = +1
Query: 169 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISIL 348
+ F D+ L LLR + G+ KP+ IQ ++I ++GRD++ AQ+GTGKTA+F++ +L
Sbjct: 7 QAFADLALAPTLLRALDEAGYVKPTPIQAQSIPLLLEGRDLLGLAQTGTGKTASFALPLL 66
Query: 349 QQIDTSIREC-----QALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQ 513
++ + R + L+LAPTREL QI + H + GG + ++
Sbjct: 67 HRLAATPRPAPKNGARVLVLAPTRELVSQIADGFESFSRHQPVRVTTIFGGVSQVHQVKA 126
Query: 514 LESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADV 693
LE GV ++V PGR+ D+I + + ++ VLDEAD+ML GF I + L D
Sbjct: 127 LEEGVDIIVAAPGRLLDLIEQGLCDLSQLETLVLDEADQMLDMGFAKPIERIVATLPEDR 186
Query: 694 XVILLSATMPDDV 732
+L SATMP +
Sbjct: 187 HTVLFSATMPKSI 199
>UniRef50_Q480Z7 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=2; Alteromonadales|Rep: ATP-dependent RNA
helicase, DEAD box family - Colwellia psychrerythraea
(strain 34H / ATCC BAA-681) (Vibriopsychroerythus)
Length = 399
Score = 128 bits (308), Expect = 2e-28
Identities = 67/191 (35%), Positives = 105/191 (54%), Gaps = 5/191 (2%)
Frame = +1
Query: 175 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 354
F +L E ++ + G+++P+ IQ+ I I G D++ AQ+GTGKTA FS+ I+ +
Sbjct: 4 FKAFSLLESIIDRVNLKGYKQPTPIQKECIPALINGNDLLGIAQTGTGKTAAFSLPIINK 63
Query: 355 -----IDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLE 519
ID + ++LIL PTRELA QI + + D L K GG + + +E
Sbjct: 64 FGRNKIDIKAKSTRSLILTPTRELASQIMQNIDDYSDGLGLKTKVVYGGVGRQAQVDSIE 123
Query: 520 SGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVXV 699
G+ ++V TPGR+ D+I ++ +++FVLDEAD ML GF + + L
Sbjct: 124 LGLDILVATPGRLLDLIETGDINFKALEVFVLDEADTMLDMGFFKDVQSIISKLPKSRQT 183
Query: 700 ILLSATMPDDV 732
+L SATMP ++
Sbjct: 184 LLFSATMPAEI 194
>UniRef50_UPI00015B5D7B Cluster: PREDICTED: similar to LD28101p;
n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
LD28101p - Nasonia vitripennis
Length = 782
Score = 127 bits (307), Expect = 2e-28
Identities = 63/190 (33%), Positives = 107/190 (56%), Gaps = 2/190 (1%)
Frame = +1
Query: 175 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 354
F M L + ++RGI G++ P+ IQ++ I + GRDV+A A++G+GKTA F I + ++
Sbjct: 40 FQSMGLSQSVIRGILKRGYKIPTPIQRKTIPIALDGRDVVAMARTGSGKTACFLIPMFEK 99
Query: 355 IDTSIRE--CQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGV 528
+ T + +ALIL+PTRELA Q Q+ + +G K +GG ++ +
Sbjct: 100 LKTRQAKTGARALILSPTRELALQTQRFIKEIGRFTGLKSSVILGGDSMDNQFSAIHGNP 159
Query: 529 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVXVILL 708
++V TPGR + ++ +I+ + DEAD + GF +QIH++ L + +L
Sbjct: 160 DIIVATPGRFLHICIEMDMNLKSIEFVIFDEADRLFEMGFGEQIHEIANRLPKNRQTLLF 219
Query: 709 SATMPDDVLE 738
SAT+P ++E
Sbjct: 220 SATLPKVLVE 229
>UniRef50_Q6YPL1 Cluster: Superfamily II DNA and RNA helicase; n=3;
Candidatus Phytoplasma|Rep: Superfamily II DNA and RNA
helicase - Onion yellows phytoplasma
Length = 552
Score = 127 bits (307), Expect = 2e-28
Identities = 64/190 (33%), Positives = 108/190 (56%), Gaps = 1/190 (0%)
Frame = +1
Query: 175 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 354
F+ + + E+ + + F + IQ I I+G DVI QAQ+GTGKT F I I+++
Sbjct: 5 FEQLPILEQTKKALKELNFIDATPIQALVIPEIIKGHDVIGQAQTGTGKTFAFGIPIIEK 64
Query: 355 IDTSIRECQALILAPTRELAQQI-QKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVH 531
I+ I++ Q+LIL PTREL Q+ +++ L + + GG + + R LE+ H
Sbjct: 65 IEPKIQKTQSLILCPTRELTLQVYEELKKLLRFYQEIRIAVVYGGESYTKQFRALEAKPH 124
Query: 532 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVXVILLS 711
+++ TPGR D + R + + +K+ LDEADEML GF++ + + K + + +L S
Sbjct: 125 LIIATPGRAIDHLERGKIDLSALKILTLDEADEMLKMGFQEALETILKKIPEERQTVLFS 184
Query: 712 ATMPDDVLEV 741
AT+P + ++
Sbjct: 185 ATLPPFIKKI 194
>UniRef50_Q5FUQ9 Cluster: ATP-dependent RNA helicase; n=11; cellular
organisms|Rep: ATP-dependent RNA helicase -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 793
Score = 127 bits (307), Expect = 2e-28
Identities = 72/189 (38%), Positives = 105/189 (55%), Gaps = 3/189 (1%)
Frame = +1
Query: 175 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 354
F D+ L E ++R I G+E P+ IQ +AI ++G DV+ AQ+GTGKTA+F++ +LQ+
Sbjct: 293 FADLGLSEPIMRAIEELGYEHPTPIQAQAIPEVLKGHDVLGVAQTGTGKTASFTLPMLQK 352
Query: 355 IDTS---IRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESG 525
+ S R ++LIL PTRELA Q+ + G +L IGG ++ E L G
Sbjct: 353 LAGSRARARMPRSLILEPTRELALQVAENFKLYGKYLRLTHALLIGGESMAEQRDVLNRG 412
Query: 526 VHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVXVIL 705
V V++ TPGR+ D+ R L V+DEAD ML GF I + +L A +
Sbjct: 413 VDVLIATPGRLLDLFGRGGLLLTQTSTLVIDEADRMLDMGFIPDIEKIVALLPAHRQTLF 472
Query: 706 LSATMPDDV 732
SATM ++
Sbjct: 473 FSATMAPEI 481
>UniRef50_O66866 Cluster: ATP-dependent RNA helicase DeaD; n=1;
Aquifex aeolicus|Rep: ATP-dependent RNA helicase DeaD -
Aquifex aeolicus
Length = 293
Score = 127 bits (307), Expect = 2e-28
Identities = 70/157 (44%), Positives = 95/157 (60%), Gaps = 1/157 (0%)
Frame = +1
Query: 274 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDH 453
+QGRD + QA++GTGKTA F + IL + + ALILAPTRELA QI+ +
Sbjct: 7 LQGRDCLIQAKTGTGKTAAFGLPILNSLKEGEK---ALILAPTRELALQIRDNFRDFARY 63
Query: 454 LNAKCHACIGGTNVREDIRQLESG-VHVVVGTPGRVYDMITRRALHANTIKLFVLDEADE 630
LN + A GGT V D++ L G V VV+GTPGR+ D+I R AL + ++ FVLDE D
Sbjct: 64 LNVRTFAFYGGTKVFGDLKVLRGGKVDVVIGTPGRIKDLIERGALKTDDVRYFVLDEVDV 123
Query: 631 MLSRGFKDQIHDVFKMLSADVXVILLSATMPDDVLEV 741
ML FK+ I ++ L + V +SAT P +V E+
Sbjct: 124 MLDMNFKEDIDFIYSQLPEEKQVFFVSATFPKEVREL 160
>UniRef50_Q11U28 Cluster: ATP-dependent RNA helicase protein; n=4;
Bacteria|Rep: ATP-dependent RNA helicase protein -
Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)
Length = 413
Score = 127 bits (307), Expect = 2e-28
Identities = 67/190 (35%), Positives = 106/190 (55%), Gaps = 4/190 (2%)
Frame = +1
Query: 175 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 354
F+ +L + + + GF +P+ IQ ++I P + G DV+A AQ+GTGKTA F I +L
Sbjct: 3 FESYDLAPGIKKSLAEAGFNRPTDIQFKSIPPILAGEDVLAIAQTGTGKTAAFVIPVLNT 62
Query: 355 I----DTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLES 522
+ + + L++APTRELA QI +V +G + + GG I +
Sbjct: 63 LINVKKSEHTDISCLVMAPTRELAVQISEVFKKIGAYTRLRTVCITGGVEQEAQIAAADY 122
Query: 523 GVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVXVI 702
G+ ++V TPGR++D+I ++ + +K+ VLDEAD ML GF I DV K L A +
Sbjct: 123 GIDILVATPGRMFDLIYQKHIKITRVKILVLDEADHMLDLGFIKDIQDVKKFLPARHQTL 182
Query: 703 LLSATMPDDV 732
SAT+ +++
Sbjct: 183 FFSATINEEI 192
>UniRef50_O07897 Cluster: Heat resistant RNA dependent ATPase; n=3;
Thermus thermophilus|Rep: Heat resistant RNA dependent
ATPase - Thermus thermophilus
Length = 510
Score = 127 bits (307), Expect = 2e-28
Identities = 70/186 (37%), Positives = 106/186 (56%), Gaps = 3/186 (1%)
Frame = +1
Query: 175 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 354
F D LK E+L ++ G P+ IQ A+ ++G+D+I QA++GTGKT F++ I ++
Sbjct: 3 FKDFPLKPEILEALHGRGLTTPTPIQAAALPLALEGKDLIGQARTGTGKTLAFALPIAER 62
Query: 355 IDTSI---RECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESG 525
+ S R+ +AL+L PTRELA Q+ + A+ HL K A GGT + L G
Sbjct: 63 LAPSQERGRKPRALVLTPTRELALQVASELTAVAPHL--KVVAVYGGTGYGKQKEALLRG 120
Query: 526 VHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVXVIL 705
VV TPGR D + + L + +++ VLDEADEMLS GF++++ + +L
Sbjct: 121 ADAVVATPGRALDYLRQGVLDLSRVEVAVLDEADEMLSMGFEEEVEALLSATPPSRQTLL 180
Query: 706 LSATMP 723
SAT+P
Sbjct: 181 FSATLP 186
>UniRef50_Q89IS2 Cluster: Cold-shock dead-box protein A; n=28;
Alphaproteobacteria|Rep: Cold-shock dead-box protein A -
Bradyrhizobium japonicum
Length = 650
Score = 126 bits (305), Expect = 4e-28
Identities = 63/184 (34%), Positives = 108/184 (58%), Gaps = 6/184 (3%)
Frame = +1
Query: 202 LLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQ 381
L R + +++P+ +Q + GRD++ AQ+G+GKT + +++ + + I +
Sbjct: 10 LARALAERNYDRPTPVQLAVLTEEAAGRDLLVSAQTGSGKTLAYGLALAKDLLDGIERFE 69
Query: 382 ------ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVG 543
ALI+APTRELA Q+Q+ + L +H + + +C+GG + R + R+L +G H+VVG
Sbjct: 70 RAGAPLALIVAPTRELALQVQRELAWLYEHADGRVVSCVGGMDPRREQRELAAGAHIVVG 129
Query: 544 TPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVXVILLSATMP 723
TPGR+ D + R L + +K VLDEADEML+ GF++ + + + +L SAT P
Sbjct: 130 TPGRLCDHLRRGRLDISELKAVVLDEADEMLNLGFREDMEFILETTPETRRTLLFSATFP 189
Query: 724 DDVL 735
++
Sbjct: 190 RGIV 193
>UniRef50_Q41FS1 Cluster: IMP dehydrogenase/GMP reductase:Helicase,
C-terminal:DEAD/DEAH box helicase, N-terminal; n=1;
Exiguobacterium sibiricum 255-15|Rep: IMP
dehydrogenase/GMP reductase:Helicase,
C-terminal:DEAD/DEAH box helicase, N-terminal -
Exiguobacterium sibiricum 255-15
Length = 450
Score = 126 bits (305), Expect = 4e-28
Identities = 63/188 (33%), Positives = 114/188 (60%), Gaps = 4/188 (2%)
Frame = +1
Query: 175 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 354
F +L ++ + +KP+ IQ R I ++GRD+I Q+Q+GTGKT +F + I+Q
Sbjct: 4 FSHFDLHPFVVEALEDARIKKPTDIQSRIIPAALKGRDIIGQSQTGTGKTLSFLLPIVQN 63
Query: 355 IDTSIRECQALILAPTRELAQQI----QKVVIALGDHLNAKCHACIGGTNVREDIRQLES 522
++ ++E QA+I+APTRELA QI + +++ D++ K GG + I +++
Sbjct: 64 VNPELQEMQAIIVAPTRELAWQIHEELKSILVKQPDYI--KTSLITGGMDRERQIGRVKV 121
Query: 523 GVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVXVI 702
+V+GTPGR+ D+ +AL + +K +++DEAD+ML GF ++ + + L + ++
Sbjct: 122 SPQIVIGTPGRILDLFKEQALKPHFVKHYIIDEADQMLDMGFLPEVDRIAQALPEKLQMM 181
Query: 703 LLSATMPD 726
+ SAT+P+
Sbjct: 182 VFSATIPE 189
>UniRef50_A6QC93 Cluster: ATP-independent RNA helicase DbpA; n=1;
Sulfurovum sp. NBC37-1|Rep: ATP-independent RNA helicase
DbpA - Sulfurovum sp. (strain NBC37-1)
Length = 453
Score = 126 bits (305), Expect = 4e-28
Identities = 63/183 (34%), Positives = 101/183 (55%), Gaps = 1/183 (0%)
Frame = +1
Query: 187 NLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTS 366
N+ E LL + GF + IQQ++I P ++G+D++AQ+++G+GKT F I + D
Sbjct: 9 NIPEALLGTLETLGFTTMTEIQQKSIGPILKGKDILAQSKTGSGKTLAFGIPAVMGTDVK 68
Query: 367 IRECQALILAPTRELAQQIQKVVIALGDH-LNAKCHACIGGTNVREDIRQLESGVHVVVG 543
+ Q +++ PTRELA+Q+ + + + N K GG +R L G H+++G
Sbjct: 69 SNKPQTIVITPTRELAEQVAMELRKIAAYKANLKILTLYGGVPLRAQADSLAKGAHILIG 128
Query: 544 TPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVXVILLSATMP 723
TPGR+ D + + L +IK VLDEAD ML GF ++I + + +L SAT P
Sbjct: 129 TPGRIQDHLAKGTLTLESIKTLVLDEADRMLDMGFYEEIIKIGSNMPKQKQTLLFSATFP 188
Query: 724 DDV 732
+
Sbjct: 189 PKI 191
>UniRef50_UPI0000DAE40A Cluster: hypothetical protein
Rgryl_01000266; n=1; Rickettsiella grylli|Rep:
hypothetical protein Rgryl_01000266 - Rickettsiella
grylli
Length = 433
Score = 126 bits (304), Expect = 6e-28
Identities = 69/194 (35%), Positives = 109/194 (56%), Gaps = 3/194 (1%)
Frame = +1
Query: 160 QVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSI 339
+++ F + N ++L GI G+ + IQ +AI +QGRDV+ AQ+GTGKTA +++
Sbjct: 10 ELLVNFTEFNFNTQILSGIQTQGYRTATPIQIKAIPAILQGRDVVGLAQTGTGKTAAYAL 69
Query: 340 SILQQI-DTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGG-TNVREDIRQ 513
+LQQ+ + + +ALIL+PTR+LA QI + G + +C GG N +
Sbjct: 70 PLLQQLTEGPPGQLRALILSPTRDLADQICVAMNHFGRQTHLRCATIYGGKINYTRQYQL 129
Query: 514 LESGVHVVVGTPGRVYDMIT-RRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSAD 690
L GV ++V PGR+ D++ ++ +K VLDEAD + GF+D I+ + K L
Sbjct: 130 LTGGVDIIVACPGRLLDLLQGKKNNFLQQVKHLVLDEADHLFDHGFRDAIYHILKHLPPR 189
Query: 691 VXVILLSATMPDDV 732
+L SATM D+
Sbjct: 190 RQNLLFSATMSADI 203
>UniRef50_UPI00006CDDA3 Cluster: CLN3 protein; n=1; Tetrahymena
thermophila SB210|Rep: CLN3 protein - Tetrahymena
thermophila SB210
Length = 1138
Score = 126 bits (304), Expect = 6e-28
Identities = 71/191 (37%), Positives = 109/191 (57%), Gaps = 6/191 (3%)
Frame = +1
Query: 166 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPC-IQGRDVIAQAQSGTGKTATFS-- 336
+ +F + EEL+R I GFEKP+ IQ +A+ PC + GRD++ A++G+GKT ++
Sbjct: 61 IVSFGHLGFDEELMRQITKLGFEKPTQIQCQAL-PCGLSGRDIVGVAKTGSGKTVSYLWP 119
Query: 337 --ISILQQIDTSIRECQ-ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDI 507
I IL Q + E LILAPTREL QQ+ N A +GG N E
Sbjct: 120 LLIHILDQRELEKNEGPIGLILAPTRELCQQVYTESKRYAKIYNISVGALLGGENKHEQW 179
Query: 508 RQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSA 687
+ L++GV +++ TPGR+ +MI ++A + V+DEAD+M S GF+ QI + + +
Sbjct: 180 KMLKAGVEILIATPGRLMEMIQKKATNLRRCTYVVIDEADKMFSMGFEKQIRSIMQQIRP 239
Query: 688 DVXVILLSATM 720
D +L +AT+
Sbjct: 240 DRQTLLFTATL 250
>UniRef50_Q4V836 Cluster: MGC114699 protein; n=9; Deuterostomia|Rep:
MGC114699 protein - Xenopus laevis (African clawed frog)
Length = 758
Score = 126 bits (304), Expect = 6e-28
Identities = 69/194 (35%), Positives = 108/194 (55%), Gaps = 4/194 (2%)
Frame = +1
Query: 172 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 351
TF DMNL LL+ I A F +P+ IQ+ I + G+D+ A A +GTGKTA F + +L+
Sbjct: 182 TFQDMNLSRPLLKAISAMSFTQPTPIQKACIPVGLLGKDICACAATGTGKTAAFMLPVLE 241
Query: 352 QIDTSIREC---QALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLES 522
++ RE + L+L PTREL Q+ V L +GG +V+ L S
Sbjct: 242 RLIYKPREAPVTRVLVLVPTRELGIQVHAVTRQLAQFTEVTTCLAVGGLDVKTQEAALRS 301
Query: 523 GVHVVVGTPGRVYDMITR-RALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVXV 699
G V++ TPGR+ D + + N I++ +LDEAD ML F++Q+ ++ ++ S
Sbjct: 302 GPDVLIATPGRLIDHLHNCPSFSLNCIEVLILDEADRMLDEYFEEQMKEIIRLCSHQRQT 361
Query: 700 ILLSATMPDDVLEV 741
+L SATM ++V ++
Sbjct: 362 LLFSATMSEEVKDL 375
>UniRef50_O34750 Cluster: YfmL protein; n=5; Bacillus|Rep: YfmL
protein - Bacillus subtilis
Length = 376
Score = 126 bits (304), Expect = 6e-28
Identities = 59/174 (33%), Positives = 107/174 (61%)
Frame = +1
Query: 220 AYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAP 399
A GF+KP+ +Q++A + G+DVIA++ +GTGKT +++ +L++I + QA+ILAP
Sbjct: 21 ASGFQKPTPVQEQAAQLIMDGKDVIAESPTGTGKTLAYALPVLERIKPEQKHPQAVILAP 80
Query: 400 TRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVYDMITRR 579
+REL QI +V+ + + IGG NV++ + +L+ H++VGTPGRV+++I +
Sbjct: 81 SRELVMQIFQVIQDWKAGSELRAASLIGGANVKKQVEKLKKHPHIIVGTPGRVFELIKAK 140
Query: 580 ALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVXVILLSATMPDDVLEV 741
L + +K VLDE D+++ ++ + + K D ++ SAT+ + +V
Sbjct: 141 KLKMHEVKTIVLDETDQLVLPEHRETMKQIIKTTLRDRQLLCFSATLKKETEDV 194
>UniRef50_Q2YZZ9 Cluster: Putative uncharacterized protein; n=1;
uncultured candidate division OP8 bacterium|Rep:
Putative uncharacterized protein - uncultured candidate
division OP8 bacterium
Length = 453
Score = 126 bits (304), Expect = 6e-28
Identities = 72/184 (39%), Positives = 98/184 (53%), Gaps = 1/184 (0%)
Frame = +1
Query: 175 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 354
F ++L LL+ + GF +P+ IQ AI P + GRDV+A A +G+GKTA F + IL Q
Sbjct: 3 FSSLHLHPTLLKALKELGFPRPTPIQADAIPPAMSGRDVMASAVTGSGKTAAFLLPILHQ 62
Query: 355 -IDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVH 531
ID +AL++ PTRELA QI + + L H A GG ++R GV
Sbjct: 63 LIDRPRGTTRALVITPTRELAAQILEDLNDLAVHTPISAAAVFGGVSIRPQEHAFRRGVD 122
Query: 532 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVXVILLS 711
V++GTPGR+ D ++ VLDEAD ML GF I + K + A + S
Sbjct: 123 VLIGTPGRLLDHFRAPYAKLAGLEHLVLDEADRMLDMGFLPDIRRILKHIPARRQTLFFS 182
Query: 712 ATMP 723
ATMP
Sbjct: 183 ATMP 186
>UniRef50_UPI0000585111 Cluster: PREDICTED: hypothetical protein;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 1117
Score = 126 bits (303), Expect = 8e-28
Identities = 66/149 (44%), Positives = 96/149 (64%), Gaps = 1/149 (0%)
Frame = +1
Query: 283 RDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNA 462
+D+I QA+SGTGKT FS+ L+ ID + Q LILAPTRE+A QIQ + A+G +
Sbjct: 4 QDLIVQAKSGTGKTCVFSVIALEGIDLTNPSTQVLILAPTREIAVQIQDTIRAIGCEMEG 63
Query: 463 -KCHACIGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLS 639
+ H IGGT D ++L+ H+ VGTPGR+ +I L TI+LFVLDEAD++L
Sbjct: 64 LRSHVFIGGTLFGPDRQKLKK-CHIAVGTPGRIKQLIEYEVLKTGTIRLFVLDEADKLLD 122
Query: 640 RGFKDQIHDVFKMLSADVXVILLSATMPD 726
F++Q++ ++ LS + ++ LSAT P+
Sbjct: 123 DTFQEQVNWIYNHLSDNKQMLALSATYPE 151
>UniRef50_Q5NN72 Cluster: DNA and RNA helicase; n=3;
Sphingomonadales|Rep: DNA and RNA helicase - Zymomonas
mobilis
Length = 492
Score = 126 bits (303), Expect = 8e-28
Identities = 72/187 (38%), Positives = 103/187 (55%), Gaps = 3/187 (1%)
Frame = +1
Query: 172 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATF---SIS 342
+F D+ L +ELL+ + G+E+P+ +Q AI + RD+IA AQ+GTGKTA+F I
Sbjct: 2 SFADLGLSKELLQAVAELGYEEPTPVQAAAIPSVLMMRDLIAVAQTGTGKTASFVLPMID 61
Query: 343 ILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLES 522
IL R ++LIL PTRELA Q+ + G + IGG + E LE
Sbjct: 62 ILAHGRCRARMPRSLILEPTRELAAQVAENFEKYGKYHKLSMSLLIGGVPMAEQQAALEK 121
Query: 523 GVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVXVI 702
GV V++ TPGR+ D+ R + ++ ++ V+DEAD ML GF I + L +
Sbjct: 122 GVDVLIATPGRLLDLFERGKILLSSCEMLVIDEADRMLDMGFIPDIETICTKLPTSRQTL 181
Query: 703 LLSATMP 723
L SATMP
Sbjct: 182 LFSATMP 188
>UniRef50_A0KZD5 Cluster: DEAD/DEAH box helicase domain protein;
n=19; Alteromonadales|Rep: DEAD/DEAH box helicase domain
protein - Shewanella sp. (strain ANA-3)
Length = 487
Score = 126 bits (303), Expect = 8e-28
Identities = 66/192 (34%), Positives = 112/192 (58%), Gaps = 3/192 (1%)
Frame = +1
Query: 175 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 354
FD + L +L I G+ + + +QQ+ I ++G+D++A AQ+GTGKTA+F++ +L+Q
Sbjct: 24 FDTLGLSSPILNAIAECGYLQLTQVQQQVIPLALEGKDIMACAQTGTGKTASFALPVLEQ 83
Query: 355 IDTSIRE---CQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESG 525
+ + +AL++ PTRELA Q+ + L K A GG N+ + +E G
Sbjct: 84 LSKQPNDKPLLRALVMTPTRELAIQVCANIQKYSQFLPLKTLAVYGGANMNPQRKGVEQG 143
Query: 526 VHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVXVIL 705
V ++V TPGR++D+I + L +++ V+DEAD ML GF I V ++++ + +L
Sbjct: 144 VDILVATPGRLFDIIGQFHLDLSSVTTLVIDEADRMLDLGFVRDIEKVKRLIATEHQTML 203
Query: 706 LSATMPDDVLEV 741
SAT D V ++
Sbjct: 204 FSATYSDAVKQL 215
>UniRef50_P54475 Cluster: Probable ATP-dependent RNA helicase yqfR;
n=12; Bacillaceae|Rep: Probable ATP-dependent RNA
helicase yqfR - Bacillus subtilis
Length = 438
Score = 126 bits (303), Expect = 8e-28
Identities = 68/189 (35%), Positives = 112/189 (59%), Gaps = 5/189 (2%)
Frame = +1
Query: 175 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 354
F+ LK ++ ++ GF +P+ IQ+R I ++ VI Q+Q+GTGKT + + +L +
Sbjct: 6 FELYELKPFIIDAVHRLGFYEPTDIQKRLIPAVLKKESVIGQSQTGTGKTHAYLLPLLNK 65
Query: 355 IDTSIRECQALILAPTRELAQQIQKVVIAL-----GDHLNAKCHACIGGTNVREDIRQLE 519
ID + Q +I APTRELA QI + + + G + +KC IGGT+ ++ I +L+
Sbjct: 66 IDPAKDVVQVVITAPTRELANQIYQEALKITQGEEGSQIRSKCF--IGGTDKQKSIDKLK 123
Query: 520 SGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVXV 699
H+VVGTPGR+ D+I +AL + + V+DEAD ML GF + + + D+ +
Sbjct: 124 IQPHLVVGTPGRIADLIKEQALSVHKAESLVIDEADLMLDMGFLADVDYIGSRMPEDLQM 183
Query: 700 ILLSATMPD 726
++ SAT+P+
Sbjct: 184 LVFSATIPE 192
>UniRef50_P32892 Cluster: ATP-dependent RNA helicase DRS1; n=13;
Saccharomycetales|Rep: ATP-dependent RNA helicase DRS1 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 752
Score = 126 bits (303), Expect = 8e-28
Identities = 66/192 (34%), Positives = 115/192 (59%), Gaps = 5/192 (2%)
Frame = +1
Query: 160 QVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSI 339
Q+ E F+ ++L +L+G+ + G+ KPS IQ I + G+D+IA A +G+GKTA F I
Sbjct: 228 QMYENFNSLSLSRPVLKGLASLGYVKPSPIQSATIPIALLGKDIIAGAVTGSGKTAAFMI 287
Query: 340 SILQQI---DTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHA-CIGGTNVREDI 507
I++++ I + ++L PTRELA Q+ V + ++ +GG N+R+
Sbjct: 288 PIIERLLYKPAKIASTRVIVLLPTRELAIQVADVGKQIARFVSGITFGLAVGGLNLRQQE 347
Query: 508 RQLESGVHVVVGTPGRVYDMITRRA-LHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLS 684
+ L+S +V+ TPGR D I A + +++++ V+DEAD ML GF+D+++++ +L
Sbjct: 348 QMLKSRPDIVIATPGRFIDHIRNSASFNVDSVEILVMDEADRMLEEGFQDELNEIMGLLP 407
Query: 685 ADVXVILLSATM 720
++ +L SATM
Sbjct: 408 SNRQNLLFSATM 419
>UniRef50_P0C2N7 Cluster: ATP-dependent RNA helicase DRS1; n=2;
Chaetomium globosum|Rep: ATP-dependent RNA helicase DRS1
- Chaetomium globosum (Soil fungus)
Length = 795
Score = 126 bits (303), Expect = 8e-28
Identities = 68/193 (35%), Positives = 106/193 (54%), Gaps = 4/193 (2%)
Frame = +1
Query: 166 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 345
+ +F M+L +LRG+ + GF KP+ IQ + I + G+DV+ A +G+GKTA F + I
Sbjct: 275 LSSFQGMSLSRPILRGLTSVGFTKPTPIQAKTIPIALMGKDVVGGAVTGSGKTAAFVVPI 334
Query: 346 LQQI---DTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQL 516
L+++ + + ++L PTRELA Q V L H + K +GG +++ +L
Sbjct: 335 LERLLYRPKKVPTTRVVVLTPTRELAIQCHSVATKLASHTDIKFCLAVGGLSLKVQEGEL 394
Query: 517 ESGVHVVVGTPGRVYDMITRRALHA-NTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADV 693
VV+ TPGR D + A A T+++ VLDEAD ML GF D+++++ L
Sbjct: 395 RLRPDVVIATPGRFIDHMRNSASFAVETVEILVLDEADRMLEDGFADELNEILTTLPKSR 454
Query: 694 XVILLSATMPDDV 732
+L SATM V
Sbjct: 455 QTMLFSATMTSTV 467
>UniRef50_A6CFZ8 Cluster: ATP-dependent RNA helicase; n=1;
Planctomyces maris DSM 8797|Rep: ATP-dependent RNA
helicase - Planctomyces maris DSM 8797
Length = 445
Score = 125 bits (302), Expect = 1e-27
Identities = 67/197 (34%), Positives = 107/197 (54%), Gaps = 5/197 (2%)
Frame = +1
Query: 166 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 345
+ TF ++ L + + + ++ P+ IQ + I ++GRDV+ AQ+GTGKTA ++ I
Sbjct: 1 MNTFQELKLIAPVQKALVEENYKIPTPIQAQTIPAALEGRDVLGCAQTGTGKTAALALPI 60
Query: 346 LQQIDTSIREC-----QALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIR 510
L Q+ + R+ AL+LAPTRELA QI A G HL + GG ++
Sbjct: 61 LNQLGKNSRKSIPHHPLALVLAPTRELAIQIGDSFDAYGRHLKLRSVLIYGGVGQGNQVK 120
Query: 511 QLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSAD 690
L+ G H++V TPGR+ D++ + + N +++FVLDEAD ML GF + + L
Sbjct: 121 ALKRGAHILVATPGRLLDLMNQGHIKLNQLEVFVLDEADRMLDMGFLPDLKRIITQLPTQ 180
Query: 691 VXVILLSATMPDDVLEV 741
+ SAT+ + E+
Sbjct: 181 RQSLFFSATLAPKITEL 197
>UniRef50_Q1FMF9 Cluster: Helicase-like:DbpA, RNA-binding:DEAD/DEAH
box helicase-like; n=1; Clostridium phytofermentans
ISDg|Rep: Helicase-like:DbpA, RNA-binding:DEAD/DEAH box
helicase-like - Clostridium phytofermentans ISDg
Length = 483
Score = 125 bits (301), Expect = 1e-27
Identities = 64/182 (35%), Positives = 102/182 (56%)
Frame = +1
Query: 175 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 354
F L EE+++ + + +P+ IQ++ I ++G+D+IA++++G+GKTA F+I I +
Sbjct: 6 FTQYKLCEEIIQALSMLHYIEPTPIQEKVIPLALEGKDIIAKSKTGSGKTAAFAIPICES 65
Query: 355 IDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHV 534
I QAL+L PTRELA Q++ + +G K GG + L+ H+
Sbjct: 66 IVWEENLPQALVLEPTRELAYQVKDEIFNVGRMKRVKVPVVFGGFPFDKQALTLKQKSHI 125
Query: 535 VVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVXVILLSA 714
VVGTPGRV D L + +K ++DEAD ML GF D + + L ++ ++L SA
Sbjct: 126 VVGTPGRVLDHCETGTLKCSNVKYVIIDEADLMLDMGFLDDVKRILSYLPENITIMLFSA 185
Query: 715 TM 720
TM
Sbjct: 186 TM 187
>UniRef50_A4V6K5 Cluster: DEAD box polypeptide 19 protein; n=3;
Platyhelminthes|Rep: DEAD box polypeptide 19 protein -
Dugesia japonica (Planarian)
Length = 434
Score = 125 bits (301), Expect = 1e-27
Identities = 76/198 (38%), Positives = 122/198 (61%), Gaps = 7/198 (3%)
Frame = +1
Query: 166 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCI--QGRDVIAQAQSGTGKTATFSI 339
V++F+D+ LK ELL GI + GF KPS+IQ+RA+ + Q +++IAQ+QSGTGKTATF +
Sbjct: 47 VKSFEDLQLKSELLNGISSMGFRKPSSIQERALPMLLENQPKNLIAQSQSGTGKTATFLL 106
Query: 340 SILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNVREDIRQL 516
++L +ID + CQ L +APTREL QI +V I + + N K I G + DI +
Sbjct: 107 TMLSKIDVNDPFCQCLCMAPTRELVNQIAEVAIIMSKFMNNVKITCAIKG--LSPDILEG 164
Query: 517 ESGVHVVVGTPGRVYDMIT-RRALHAN--TIKLFVLDEADEML-SRGFKDQIHDVFKMLS 684
+ +++GTPG + T +L+ N +K+FVLDEAD ++ + F + + ++
Sbjct: 165 QINSQIIIGTPGTLKFWTTDNSSLYFNPKKLKVFVLDEADILIETPEFLNIAKRIKSKVT 224
Query: 685 ADVXVILLSATMPDDVLE 738
+ ++L SAT + V++
Sbjct: 225 NNCQILLFSATYDERVMD 242
>UniRef50_A5E6W6 Cluster: ATP-dependent rRNA helicase RRP3; n=4;
Saccharomycetaceae|Rep: ATP-dependent rRNA helicase RRP3
- Lodderomyces elongisporus (Yeast) (Saccharomyces
elongisporus)
Length = 504
Score = 125 bits (301), Expect = 1e-27
Identities = 66/191 (34%), Positives = 109/191 (57%), Gaps = 2/191 (1%)
Frame = +1
Query: 166 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 345
V++F + +L ELL I + + +P+ IQ AI +QG+D++ A++G+GKTA F+I I
Sbjct: 97 VQSFTEFDLVPELLESIQSLKYTQPTPIQAAAIPHALQGKDIVGIAETGSGKTAAFAIPI 156
Query: 346 LQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESG 525
LQ + T+ + AL+LAPTRELA QI++ ALG + + IGG ++ E R L
Sbjct: 157 LQTLYTAAQPYYALVLAPTRELAFQIKETFDALGSSMGLRSVCIIGGMSMMEQARDLMRK 216
Query: 526 VHVVVGTPGRVYDMITR-RALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVXV- 699
HV++ TPGR+ D + + ++ V+DE D M+ + I + K + + +
Sbjct: 217 PHVIIATPGRLIDHLEHTKGFSLKKLQYLVMDEVDRMIDLDYAKAIDQILKQIPSHQRIT 276
Query: 700 ILLSATMPDDV 732
L +ATM ++
Sbjct: 277 YLYTATMSREI 287
>UniRef50_Q9VHP0 Cluster: ATP-dependent RNA helicase bel; n=4;
Protostomia|Rep: ATP-dependent RNA helicase bel -
Drosophila melanogaster (Fruit fly)
Length = 798
Score = 125 bits (301), Expect = 1e-27
Identities = 76/211 (36%), Positives = 112/211 (53%), Gaps = 19/211 (9%)
Frame = +1
Query: 166 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 345
+ +FDD+ L E + + ++KP+ +Q+ AI I GRD++A AQ+G+GKTA F + I
Sbjct: 294 ITSFDDVQLTEIIRNNVALARYDKPTPVQKHAIPIIINGRDLMACAQTGSGKTAAFLVPI 353
Query: 346 LQQI--------DTSIRECQ-------ALILAPTRELAQQIQKVVIALGDHLNAKCHACI 480
L Q+ S R+ L+LAPTRELA QI + +
Sbjct: 354 LNQMYELGHVPPPQSTRQYSRRKQYPLGLVLAPTRELATQIFEEAKKFAYRSRMRPAVLY 413
Query: 481 GGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQI 660
GG N E +R+L+ G H++V TPGR+ DMITR + I+ VLDEAD ML GF+ QI
Sbjct: 414 GGNNTSEQMRELDRGCHLIVATPGRLEDMITRGKVGLENIRFLVLDEADRMLDMGFEPQI 473
Query: 661 HDVFKML----SADVXVILLSATMPDDVLEV 741
+ + L + ++ SAT P + E+
Sbjct: 474 RRIVEQLNMPPTGQRQTLMFSATFPKQIQEL 504
>UniRef50_Q5QWG1 Cluster: ATP-dependent RNA helicase; n=1;
Idiomarina loihiensis|Rep: ATP-dependent RNA helicase -
Idiomarina loihiensis
Length = 474
Score = 124 bits (300), Expect = 2e-27
Identities = 65/187 (34%), Positives = 103/187 (55%), Gaps = 1/187 (0%)
Frame = +1
Query: 175 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 354
F+ +NL LL + G+++ + +Q ++ + D + +A +G+GKT F++++L +
Sbjct: 23 FNQLNLPPALLTRLDEIGYQQMTPVQSLSLPVILNNTDAVVRADTGSGKTTAFALTLLAK 82
Query: 355 IDTSIRECQALILAPTRELAQQIQKVVIALGDH-LNAKCHACIGGTNVREDIRQLESGVH 531
++ QAL+L PTRELA Q+ V L LN K GG R LE G H
Sbjct: 83 LEAKSFSPQALVLCPTRELAHQVADEVRKLAKSMLNIKILTLCGGEPSRIQTNSLEHGAH 142
Query: 532 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVXVILLS 711
V+VGTPGRV D + +R + + + VLDEAD ML GF+D ++ + K + +L S
Sbjct: 143 VLVGTPGRVLDHLEQRNVDLSMLTTLVLDEADRMLEMGFQDSLNAIVKHIPKTRQTLLFS 202
Query: 712 ATMPDDV 732
AT P ++
Sbjct: 203 ATYPKNI 209
>UniRef50_Q30SZ2 Cluster: DEAD/DEAH box helicase-like; n=1;
Thiomicrospira denitrificans ATCC 33889|Rep: DEAD/DEAH
box helicase-like - Thiomicrospira denitrificans (strain
ATCC 33889 / DSM 1351)
Length = 432
Score = 124 bits (300), Expect = 2e-27
Identities = 69/191 (36%), Positives = 109/191 (57%), Gaps = 4/191 (2%)
Frame = +1
Query: 172 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 351
+F+ + + + LL I G+EKP+ IQ RAI + DV A AQ+GTGKTA F + +LQ
Sbjct: 2 SFEKLGVIKPLLSAIKDLGYEKPTTIQTRAIPLILAKSDVFATAQTGTGKTAAFGLGMLQ 61
Query: 352 QI----DTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLE 519
++ D R + L++APTREL+ QI + + + ++ +GG ++ + L+
Sbjct: 62 RLRKTSDDKQRALRGLVIAPTRELSIQIYEDLQSYAKNMGINIAVLVGGKDLESQQKILK 121
Query: 520 SGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVXV 699
GV +V+ TPGRV + + + L + +++FVLDEAD ML GF +I + +L
Sbjct: 122 EGVDIVIATPGRVLEHVD-KGLSLSHVEIFVLDEADRMLDMGFMKEIRRIHPILPKRHQT 180
Query: 700 ILLSATMPDDV 732
+L SAT D V
Sbjct: 181 LLFSATFSDKV 191
>UniRef50_A0KXT6 Cluster: DEAD/DEAH box helicase domain protein;
n=22; Gammaproteobacteria|Rep: DEAD/DEAH box helicase
domain protein - Shewanella sp. (strain ANA-3)
Length = 491
Score = 124 bits (300), Expect = 2e-27
Identities = 68/190 (35%), Positives = 109/190 (57%), Gaps = 4/190 (2%)
Frame = +1
Query: 175 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 354
F + L L++ + G+ P+ IQ +AI + G++V+A AQ+GTGKTA+F + +L +
Sbjct: 3 FSQLGLHSALVKAVTELGYTTPTPIQTKAIPSILAGKNVLAAAQTGTGKTASFVLPLLHR 62
Query: 355 IDTS--IR--ECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLES 522
+ IR +A+IL PTRELA Q+++ + +L A GG + ++L
Sbjct: 63 FADAPKIRPKRVRAIILTPTRELALQVEENINQYAKYLPLTAMAMYGGVDAAPQKKRLIE 122
Query: 523 GVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVXVI 702
GV ++V TPGR+ DM T+RA+ + + + VLDEAD ML GF + I+ + + L +
Sbjct: 123 GVDLLVATPGRLLDMYTQRAIRFDEVSVLVLDEADRMLDMGFIEDINSIIEKLPEQRQNL 182
Query: 703 LLSATMPDDV 732
L SAT+ V
Sbjct: 183 LFSATLSKQV 192
>UniRef50_Q49K88 Cluster: DEAD box RNA helicase; n=1; Toxoplasma
gondii|Rep: DEAD box RNA helicase - Toxoplasma gondii
Length = 479
Score = 124 bits (300), Expect = 2e-27
Identities = 72/193 (37%), Positives = 107/193 (55%), Gaps = 3/193 (1%)
Frame = +1
Query: 163 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSIS 342
V TF + L EL + G++ P+AIQ + +QGRD+IA A++G+GKTA F +
Sbjct: 49 VSPTFASLGLCSELCASVSTLGWKSPTAIQSEVLPYALQGRDIIALAETGSGKTAAFGLP 108
Query: 343 ILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLES 522
ILQ++ + ALILAPTREL QI + ++A+G L +GG + L
Sbjct: 109 ILQRLLQRTQRFYALILAPTRELCLQISQQILAMGGTLGVTVVTLVGGLDHNTQAIALAK 168
Query: 523 GVHVVVGTPGRVYDMITR-RALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLS--ADV 693
HVVVG+PGRV D + + + ++K+ VLDEAD +LS F + + + + A+
Sbjct: 169 KPHVVVGSPGRVVDHLQQTKGFSLKSVKVLVLDEADRLLSLDFDAALQVLLEHVGSPAER 228
Query: 694 XVILLSATMPDDV 732
+L SATM V
Sbjct: 229 QTMLFSATMTTKV 241
>UniRef50_A5E058 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=1; Lodderomyces elongisporus NRRL
YB-4239|Rep: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5 - Lodderomyces elongisporus (Yeast)
(Saccharomyces elongisporus)
Length = 994
Score = 124 bits (300), Expect = 2e-27
Identities = 65/174 (37%), Positives = 100/174 (57%), Gaps = 8/174 (4%)
Frame = +1
Query: 226 GFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQA-----LI 390
GF KPS IQ +AI + GRD+I A++G+GKT ++ + +++ I + L+
Sbjct: 407 GFAKPSPIQCQAIPIVLSGRDMIGVAKTGSGKTLSYVLPMVRHIQDQLFPKPGEGPIGLV 466
Query: 391 LAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVYDMI 570
L+PTRELA QI+K ++ ++ K C GG+N+ I +L+ GV+V+V TPGR+ D++
Sbjct: 467 LSPTRELALQIEKEILKFSSTMDLKVCCCYGGSNIENQISELKRGVNVIVATPGRLIDLL 526
Query: 571 TRRALHANTIK---LFVLDEADEMLSRGFKDQIHDVFKMLSADVXVILLSATMP 723
T++ VLDEAD M GF+ QI +F + D +L SAT P
Sbjct: 527 AANGGRITTLRRTTFVVLDEADRMFDMGFEPQIQKIFTQIRPDKQTVLFSATFP 580
>UniRef50_Q2S6I0 Cluster: ATP-dependent RNA helicase; n=1;
Salinibacter ruber DSM 13855|Rep: ATP-dependent RNA
helicase - Salinibacter ruber (strain DSM 13855)
Length = 478
Score = 124 bits (299), Expect = 2e-27
Identities = 69/188 (36%), Positives = 107/188 (56%), Gaps = 4/188 (2%)
Frame = +1
Query: 190 LKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSI 369
L + + ++A G+ + +Q++AI + GRD+I Q+Q+G+GKT F + + ++
Sbjct: 48 LSGHMEQAVHAAGWTELMDVQRKAIPYTLDGRDLIVQSQTGSGKTGAFLLPLFDLVNPDK 107
Query: 370 RECQALILAPTRELAQQI----QKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVV 537
E Q LIL PTRELA+QI +++ IA + GG + I L++G VV
Sbjct: 108 EEQQVLILTPTRELARQIHEEFEQMKIATPRTNRMEAVLIYGGVGYQPQIDGLKNGAQVV 167
Query: 538 VGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVXVILLSAT 717
+GTPGR+ D I + A+T+++ VLDEADEMLS GF + D+ + + D + SAT
Sbjct: 168 IGTPGRILDHIKKDNFDASTLRMLVLDEADEMLSMGFYPDMKDIVEHVPGDRVSYMYSAT 227
Query: 718 MPDDVLEV 741
MP V V
Sbjct: 228 MPPKVRSV 235
>UniRef50_Q188H5 Cluster: Putative ATP-dependent RNA helicase; n=2;
Clostridium difficile|Rep: Putative ATP-dependent RNA
helicase - Clostridium difficile (strain 630)
Length = 381
Score = 124 bits (299), Expect = 2e-27
Identities = 67/195 (34%), Positives = 112/195 (57%), Gaps = 3/195 (1%)
Frame = +1
Query: 166 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 345
+ TF+ + + L+ G+ P+ +Q I IQ +D++ +Q+GTGKT + + I
Sbjct: 1 MNTFEQLKISSTLIDGLKKQDITSPTEVQSLVIGNIIQNKDLLINSQTGTGKTLAYLLPI 60
Query: 346 LQQIDTSIRECQALILAPTRELAQQI--QKVVIALGDHLNAKCHACIGGTNVREDIRQLE 519
++IDTS RE QALILAPT EL QI Q ++A L+ A IG N+++ I+ ++
Sbjct: 61 FEKIDTSKRETQALILAPTHELVMQITNQVELLAKNAELSVTSLALIGEVNIQKQIKNIK 120
Query: 520 S-GVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVX 696
+ H+V+G+ GRV D+I ++ L ++ IK VLDE D +L+ I D+ + D
Sbjct: 121 AVKPHIVIGSCGRVLDLIKQKKLKSHNIKTIVLDEVDNLLNGKNITCIEDIIRTTLRDRQ 180
Query: 697 VILLSATMPDDVLEV 741
+I SA++ D +++
Sbjct: 181 IIGCSASLTDSTIKI 195
>UniRef50_A7HG33 Cluster: DEAD/DEAH box helicase domain protein;
n=5; Cystobacterineae|Rep: DEAD/DEAH box helicase domain
protein - Anaeromyxobacter sp. Fw109-5
Length = 455
Score = 124 bits (299), Expect = 2e-27
Identities = 68/189 (35%), Positives = 103/189 (54%)
Frame = +1
Query: 172 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 351
+F +++L E L + GFE P+ IQ +AI P + G+DVI A +GTGKTA F + ++
Sbjct: 5 SFAELHLSPEALAALRRAGFEHPTPIQAQAIPPALAGKDVIGTAATGTGKTAAFLLPLID 64
Query: 352 QIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVH 531
++ +AL+LAPTRELA QI + + G + IGG + + L
Sbjct: 65 RL-AGKPGTRALVLAPTRELALQIGEELERFGHARRVRGAVIIGGVGMAQQAEALRQKRE 123
Query: 532 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVXVILLS 711
+V+ TPGR+ D + + + I+ VLDEAD ML GFK Q+ + + L +L S
Sbjct: 124 IVIATPGRLVDHLEQGNARLDGIEALVLDEADRMLDMGFKPQLDRILRRLPKQRQTLLFS 183
Query: 712 ATMPDDVLE 738
ATM +V +
Sbjct: 184 ATMAGEVAD 192
>UniRef50_A3I1F5 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Algoriphagus sp. PR1|Rep: DEAD/DEAH box helicase-like
protein - Algoriphagus sp. PR1
Length = 399
Score = 124 bits (299), Expect = 2e-27
Identities = 63/183 (34%), Positives = 105/183 (57%)
Frame = +1
Query: 172 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 351
+F ++L ++R + G+E + IQ+++I ++GRD++ + +G+GKT F I I++
Sbjct: 56 SFASLSLDSVMMRNLSEKGYENMTNIQEQSIEALLEGRDLLGISNTGSGKTGAFLIPIIE 115
Query: 352 QIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVH 531
+ + ALI+ PTRELA QI + +L + IGGTN+ D++ L +H
Sbjct: 116 HALKNPGQFTALIVTPTRELALQIDQEFKSLSKGMRLHSATFIGGTNINTDMKVLSRKLH 175
Query: 532 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVXVILLS 711
V+VGTPGR+ D+ R+ L N +K VLDE D ML GF + + + ++ +L S
Sbjct: 176 VIVGTPGRLLDLTNRKLLKLNQVKTLVLDEFDRMLDMGFVNDVKKLVGGMTQREQTMLFS 235
Query: 712 ATM 720
AT+
Sbjct: 236 ATL 238
>UniRef50_A0UX17 Cluster: DEAD/DEAH box helicase-like; n=5;
Clostridium|Rep: DEAD/DEAH box helicase-like -
Clostridium cellulolyticum H10
Length = 437
Score = 124 bits (299), Expect = 2e-27
Identities = 63/192 (32%), Positives = 107/192 (55%), Gaps = 2/192 (1%)
Frame = +1
Query: 169 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISIL 348
+ F+ M L++ L+ + P+ IQQ+AI ++ RDVI + +GTGKT + + +
Sbjct: 3 QLFESMELEKSLVEALKKESITVPTDIQQKAIPEALKNRDVILHSSTGTGKTLAYLLPLF 62
Query: 349 QQIDTSIRECQALILAPTRELAQQI--QKVVIALGDHLNAKCHACIGGTNVREDIRQLES 522
++ +E QALIL PT ELA Q+ Q +++ + A IG N+ I +L+
Sbjct: 63 MKLSAEKKEMQALILVPTHELAIQVVRQIELLSQNSEIKATSTPIIGDVNIMRQIDKLKL 122
Query: 523 GVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVXVI 702
H++VGTPGR+ ++I +R + A+TIK ++DEAD +L D I + K + ++
Sbjct: 123 KPHIIVGTPGRILELIQKRKISAHTIKTIIIDEADRLLDDYNLDNIKAIIKTTLKERQIV 182
Query: 703 LLSATMPDDVLE 738
+ SAT+ +E
Sbjct: 183 MCSATISKKTVE 194
>UniRef50_A0BPV0 Cluster: Chromosome undetermined scaffold_12, whole
genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_12,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 471
Score = 124 bits (299), Expect = 2e-27
Identities = 70/192 (36%), Positives = 109/192 (56%), Gaps = 5/192 (2%)
Frame = +1
Query: 166 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 345
V F + LKEELLR + GFE P+ +Q ++ + G +I QA++GTGKTA F +++
Sbjct: 72 VSQFKNFGLKEELLRAVKEAGFEHPTRVQAESLTNALLGEQLICQAKAGTGKTAVFVLTV 131
Query: 346 LQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACI--GGTNVREDIRQLE 519
L I+T + + L++ TRELAQQ + + LG + + C GG V +I+ +E
Sbjct: 132 LNTINTESNKVECLVITHTRELAQQARDEFLRLGKFMKSVKVECFYGGGEPVSVNIQTIE 191
Query: 520 S-GVHVVVGTPGRVYDMI-TRRALHANTIKLFVLDEADEML-SRGFKDQIHDVFKMLSAD 690
+ +VVGTPGR+ D+I R+AL + +K F+LDEAD M+ + I D+F +
Sbjct: 192 TVKPQIVVGTPGRLKDLICERKALKVDRLKYFILDEADTMIEDLNMRKDIQDIFLKSPQE 251
Query: 691 VXVILLSATMPD 726
+ SAT +
Sbjct: 252 KQFMAFSATFTE 263
>UniRef50_Q5BF42 Cluster: Putative uncharacterized protein; n=1;
Emericella nidulans|Rep: Putative uncharacterized protein
- Emericella nidulans (Aspergillus nidulans)
Length = 1676
Score = 124 bits (299), Expect = 2e-27
Identities = 67/200 (33%), Positives = 106/200 (53%), Gaps = 4/200 (2%)
Frame = +1
Query: 145 DTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKT 324
D + +F + NL +LRG+ A F P+ IQQ+ I + G+D++ A +G+GKT
Sbjct: 782 DAATNSAKRSFQEFNLSRPILRGLAAVNFTNPTPIQQKTIPVALLGKDIVGSAVTGSGKT 841
Query: 325 ATFSISILQQI---DTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNV 495
A F + IL+++ + + IL PTRELA Q V L + + +GG ++
Sbjct: 842 AAFVVPILERLLFRPRKVPTSRVAILMPTRELAVQCYNVATKLATYTDITFCQLVGGFSL 901
Query: 496 REDIRQLESGVHVVVGTPGRVYD-MITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVF 672
RE L+ V++ TPGR D M + +T+++ VLDEAD ML GF D+++++
Sbjct: 902 REQENVLKKRPDVIIATPGRFIDHMRNSASFTVDTLEILVLDEADRMLEDGFADELNEIL 961
Query: 673 KMLSADVXVILLSATMPDDV 732
+ +L SATM D V
Sbjct: 962 TTIPKSRQTMLFSATMTDSV 981
>UniRef50_Q09903 Cluster: ATP-dependent RNA helicase drs1; n=1;
Schizosaccharomyces pombe|Rep: ATP-dependent RNA
helicase drs1 - Schizosaccharomyces pombe (Fission
yeast)
Length = 754
Score = 124 bits (299), Expect = 2e-27
Identities = 65/191 (34%), Positives = 103/191 (53%), Gaps = 4/191 (2%)
Frame = +1
Query: 172 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 351
+F MNL +L+G+ GFE P+ IQ + I + G+D++ A +G+GKTA F + IL+
Sbjct: 260 SFQSMNLSRPILKGLSNLGFEVPTQIQDKTIPLALLGKDIVGAAVTGSGKTAAFIVPILE 319
Query: 352 QI---DTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLES 522
++ + + LIL PTRELA Q V + + CIGG +++ ++L
Sbjct: 320 RLLYRPKKVPTTRVLILCPTRELAMQCHSVATKIASFTDIMVCLCIGGLSLKLQEQELRK 379
Query: 523 GVHVVVGTPGRVYD-MITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVXV 699
+V+ TPGR D M + I++ V+DEAD ML GF D+++++ +
Sbjct: 380 RPDIVIATPGRFIDHMRNSQGFTVENIEIMVMDEADRMLEDGFADELNEIIQACPKSRQT 439
Query: 700 ILLSATMPDDV 732
+L SATM D V
Sbjct: 440 MLFSATMTDKV 450
>UniRef50_A3ZXX1 Cluster: ATP-dependent RNA helicase; n=2;
Planctomycetaceae|Rep: ATP-dependent RNA helicase -
Blastopirellula marina DSM 3645
Length = 447
Score = 124 bits (298), Expect = 3e-27
Identities = 69/191 (36%), Positives = 102/191 (53%), Gaps = 5/191 (2%)
Frame = +1
Query: 184 MNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQID- 360
M L E + + + P+ IQ +AI ++G D+I AQ+GTGKTA F++ IL Q+D
Sbjct: 1 MQLSEAIQEALATEKYHTPTPIQGQAIPHLLEGSDLIGCAQTGTGKTAAFALPILNQLDL 60
Query: 361 --TSIREC--QALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGV 528
+ C Q L+L+PTRELA QI + G ++ + GG +R L+ GV
Sbjct: 61 DRSRADACAPQVLVLSPTRELAVQIAQSFNVYGRNVKFRLTTIFGGVGQNPQVRALKRGV 120
Query: 529 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVXVILL 708
HV + TPGR+ D++ + + + K FVLDEAD ML GF + + L I
Sbjct: 121 HVAIATPGRLLDLMDQGYVDLSQAKTFVLDEADRMLDMGFMPALKTIVSKLPKQRQTIFF 180
Query: 709 SATMPDDVLEV 741
+ATMP V ++
Sbjct: 181 TATMPPKVAQL 191
>UniRef50_Q8SY39 Cluster: LD28101p; n=3; Diptera|Rep: LD28101p -
Drosophila melanogaster (Fruit fly)
Length = 827
Score = 124 bits (298), Expect = 3e-27
Identities = 65/190 (34%), Positives = 107/190 (56%), Gaps = 2/190 (1%)
Frame = +1
Query: 175 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 354
F M L EL++GI G++ P+ IQ++ I ++GRDV+A A++G+GKTA F I + ++
Sbjct: 41 FQSMGLGFELIKGITKRGYKVPTPIQRKTIPLILEGRDVVAMAKTGSGKTACFLIPLFEK 100
Query: 355 IDTS--IRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGV 528
+ + +ALIL+PTRELA Q K + LG + K +GG ++ + +
Sbjct: 101 LQRREPTKGARALILSPTRELAVQTYKFIKELGRFMELKSILVLGGDSMDSQFSAIHTCP 160
Query: 529 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVXVILL 708
V+V TPGR + L N+I+ V DEAD + GF +Q+++ L + ++
Sbjct: 161 DVIVATPGRFLHLCVEMDLKLNSIEYVVFDEADRLFEMGFGEQLNETLHRLPSSRQTVMF 220
Query: 709 SATMPDDVLE 738
SAT+P ++E
Sbjct: 221 SATLPKLLVE 230
>UniRef50_Q9ZRZ8 Cluster: DEAD-box ATP-dependent RNA helicase 28;
n=5; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 28 - Arabidopsis thaliana (Mouse-ear cress)
Length = 789
Score = 124 bits (298), Expect = 3e-27
Identities = 69/195 (35%), Positives = 110/195 (56%), Gaps = 4/195 (2%)
Frame = +1
Query: 169 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISIL 348
+TF ++NL LLR G++KP+ IQ I + GRD+ A A +G+GKTA F++ L
Sbjct: 167 DTFMELNLSRPLLRACETLGYKKPTPIQAACIPLALTGRDLCASAITGSGKTAAFALPTL 226
Query: 349 QQI---DTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLE 519
+++ + + LIL PTRELA QI ++ L + KC +GG +VRE L
Sbjct: 227 ERLLFRPKRVFATRVLILTPTRELAVQIHSMIQNLAQFTDIKCGLIVGGLSVREQEVVLR 286
Query: 520 SGVHVVVGTPGRVYDMI-TRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVX 696
S +VV TPGR+ D + ++ + + + +LDEAD +L GF +I ++ ++
Sbjct: 287 SMPDIVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLQTGFATEITELVRLCPKRRQ 346
Query: 697 VILLSATMPDDVLEV 741
+L SATM ++V E+
Sbjct: 347 TMLFSATMTEEVKEL 361
>UniRef50_Q09719 Cluster: ATP-dependent RNA helicase dbp10; n=2;
Schizosaccharomyces pombe|Rep: ATP-dependent RNA
helicase dbp10 - Schizosaccharomyces pombe (Fission
yeast)
Length = 848
Score = 124 bits (298), Expect = 3e-27
Identities = 65/190 (34%), Positives = 105/190 (55%), Gaps = 2/190 (1%)
Frame = +1
Query: 175 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 354
F M L + LLR I+ GF+ P+ IQ++ I ++GRDV+ A++G+GKTA F I +++
Sbjct: 71 FQSMGLNQTLLRAIFKKGFKAPTPIQRKTIPLLLEGRDVVGMARTGSGKTAAFVIPMIEH 130
Query: 355 IDTSIREC--QALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGV 528
+ +++ +ALIL+P RELA Q KVV + + A +GG ++ E L
Sbjct: 131 LKSTLANSNTRALILSPNRELALQTVKVVKDFSKGTDLRSVAIVGGVSLEEQFSLLSGKP 190
Query: 529 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVXVILL 708
+VV TPGR + L ++I+ V DEAD + GF Q+ ++ L +L
Sbjct: 191 DIVVATPGRFLHLKVEMKLELSSIEYVVFDEADRLFEMGFAAQLTEILHALPTSRQTLLF 250
Query: 709 SATMPDDVLE 738
SAT+P +++
Sbjct: 251 SATLPRTLVD 260
>UniRef50_Q8YH70 Cluster: ATP-DEPENDENT RNA HELICASE RHLE; n=10;
Rhizobiales|Rep: ATP-DEPENDENT RNA HELICASE RHLE -
Brucella melitensis
Length = 535
Score = 123 bits (297), Expect = 4e-27
Identities = 67/191 (35%), Positives = 109/191 (57%), Gaps = 5/191 (2%)
Frame = +1
Query: 175 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 354
F + + LL+G+ A G +P IQ +AI ++G+D++ AQ+G+GKTA FS+ ILQ+
Sbjct: 89 FAALGITGVLLKGVEAAGMTEPKPIQTQAIPSQLEGQDILGIAQTGSGKTAAFSLPILQK 148
Query: 355 I-----DTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLE 519
I + +ALILAPTRELA QI++ + + + +GG + I+++
Sbjct: 149 IIGLGDKRRPKTARALILAPTRELAVQIEQTIRNVSKSAHISTALVLGGVSKLSQIKRIA 208
Query: 520 SGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVXV 699
G+ V++ TPGR+ D++ + + + VLDEAD ML GF + + + K A+
Sbjct: 209 PGIDVLIATPGRLTDLMRDGLVDLSQTRWLVLDEADRMLDMGFINDVKRIAKATHAERQT 268
Query: 700 ILLSATMPDDV 732
L SATMP ++
Sbjct: 269 ALFSATMPKEI 279
>UniRef50_Q2WF63 Cluster: Putative uncharacterized protein; n=4;
Bilateria|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 561
Score = 123 bits (297), Expect = 4e-27
Identities = 77/234 (32%), Positives = 119/234 (50%), Gaps = 5/234 (2%)
Frame = +1
Query: 46 ERRSEDWPEDSKNGPSKDQ-GSYDGPPGMDPGTLDTDWDQVVETFDDMNLKEELLRGIYA 222
E + D E+ G D+ S D P P + D + + F + + + + +
Sbjct: 50 EDEASDEDEEESEGEEGDEFKSSDDTP--KPIQISED-NMTTKKFSQLGVCSWITQQLQT 106
Query: 223 YGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 402
+ + +Q I ++G D++ A++GTGKT F+I ILQ++ ALIL PT
Sbjct: 107 MQIKTATPVQAACIPKILEGSDILGCARTGTGKTLAFAIPILQKLSVDPYGIYALILTPT 166
Query: 403 RELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVYDMITRR- 579
RELA QI + ALG + KC +GG ++ R+L HVVV TPGR+ D+I
Sbjct: 167 RELAFQIAEQFTALGKPITLKCSVIVGGRSLIHQARELSERPHVVVATPGRLADLIESDP 226
Query: 580 ---ALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVXVILLSATMPDDV 732
A I+ FVLDEAD ML + DQ+ +F+ +S +LLSAT+ +++
Sbjct: 227 DTIAKVFKKIQFFVLDEADRMLEGQYNDQLKPIFESISEKRQTLLLSATITNNI 280
>UniRef50_Q9LYJ9 Cluster: DEAD-box ATP-dependent RNA helicase 46;
n=16; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
46 - Arabidopsis thaliana (Mouse-ear cress)
Length = 645
Score = 123 bits (297), Expect = 4e-27
Identities = 68/194 (35%), Positives = 106/194 (54%), Gaps = 4/194 (2%)
Frame = +1
Query: 172 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSIS--- 342
+F+ L ELLR +Y+ GF PS IQ ++ +Q RD++A A++G+GKT + I
Sbjct: 162 SFEATGLPNELLREVYSAGFSAPSPIQAQSWPIAMQNRDIVAIAKTGSGKTLGYLIPGFM 221
Query: 343 ILQQIDTSIRECQA-LILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLE 519
LQ+I R L+L+PTRELA QIQ + G C GG ++++E
Sbjct: 222 HLQRIHNDSRMGPTILVLSPTRELATQIQVEALKFGKSSKISCACLYGGAPKGPQLKEIE 281
Query: 520 SGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVXV 699
GV +VV TPGR+ D++ + + + + VLDEAD ML GF+ QI + +
Sbjct: 282 RGVDIVVATPGRLNDILEMKRISLHQVSYLVLDEADRMLDMGFEPQIRKIVNEVPTKRQT 341
Query: 700 ILLSATMPDDVLEV 741
++ +AT P +V ++
Sbjct: 342 LMYTATWPKEVRKI 355
>UniRef50_P21693 Cluster: ATP-independent RNA helicase dbpA; n=195;
cellular organisms|Rep: ATP-independent RNA helicase
dbpA - Escherichia coli (strain K12)
Length = 457
Score = 123 bits (297), Expect = 4e-27
Identities = 68/191 (35%), Positives = 101/191 (52%), Gaps = 2/191 (1%)
Frame = +1
Query: 175 FDDMN-LKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 351
F +N L L + G+ + +Q A+ + G+DV QA++G+GKTA F + +LQ
Sbjct: 4 FSTLNVLPPAQLTNLNELGYLTMTPVQAAALPAILAGKDVRVQAKTGSGKTAAFGLGLLQ 63
Query: 352 QIDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNVREDIRQLESGV 528
QID S+ + QAL+L PTRELA Q+ + L L N K GG L+
Sbjct: 64 QIDASLFQTQALVLCPTRELADQVAGELRRLARFLPNTKILTLCGGQPFGMQRDSLQHAP 123
Query: 529 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVXVILL 708
H++V TPGR+ D + + + + + V+DEAD ML GF D I DV + A +L
Sbjct: 124 HIIVATPGRLLDHLQKGTVSLDALNTLVMDEADRMLDMGFSDAIDDVIRFAPASRQTLLF 183
Query: 709 SATMPDDVLEV 741
SAT P+ + +
Sbjct: 184 SATWPEAIAAI 194
>UniRef50_UPI00003C8469 Cluster: hypothetical protein Faci_03001730;
n=1; Ferroplasma acidarmanus fer1|Rep: hypothetical
protein Faci_03001730 - Ferroplasma acidarmanus fer1
Length = 430
Score = 123 bits (296), Expect = 5e-27
Identities = 65/184 (35%), Positives = 105/184 (57%), Gaps = 1/184 (0%)
Frame = +1
Query: 184 MNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDT 363
M++ E L + + F +P+ IQ++AI + G+DVI ++++G+GKTA + + +L ++
Sbjct: 1 MDISENLKKSLGLMKFTEPTEIQEKAIPVVLTGKDVIIRSKTGSGKTAAYLLPVLNSVEK 60
Query: 364 -SIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVV 540
+ +A+I+ PTRELA Q +V LG K GG ++ + +L G +V+
Sbjct: 61 LKGKSVKAIIILPTRELALQTHRVASRLGKISGIKSTIVYGGASIIRQVEELP-GSDIVI 119
Query: 541 GTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVXVILLSATM 720
GTPGR+ D+ ++ L + +K VLDEAD ML GF D I + ILLSAT+
Sbjct: 120 GTPGRILDLYNQKYLKLDHVKYLVLDEADLMLDMGFIDDIKKIISFTPEGRQTILLSATL 179
Query: 721 PDDV 732
P +V
Sbjct: 180 PAEV 183
>UniRef50_A4C0F9 Cluster: ATP-dependent RNA helicase; n=6;
Bacteroidetes|Rep: ATP-dependent RNA helicase -
Polaribacter irgensii 23-P
Length = 447
Score = 123 bits (296), Expect = 5e-27
Identities = 65/185 (35%), Positives = 107/185 (57%), Gaps = 2/185 (1%)
Frame = +1
Query: 175 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGR-DVIAQAQSGTGKTATFSISILQ 351
F D+ + L + + P+ IQ++ I + + D++A A++GTGKTA F + +LQ
Sbjct: 5 FSDLGINLALQQRLNDLKIITPTEIQEKVIPIVLNDKEDIVALAKTGTGKTAAFGLPLLQ 64
Query: 352 QIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACI-GGTNVREDIRQLESGV 528
ID + QA+ILAPTREL QQI +I+ +H + A + GG ++ I +L+
Sbjct: 65 LIDVNNDAIQAIILAPTRELGQQIAANLISFAEHTSQVSIATLCGGIPIKPQIERLKEAT 124
Query: 529 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVXVILL 708
H++V TPGR+ D++ R A+ +I F+LDEADEM++ K+ + + K + L
Sbjct: 125 HIIVATPGRLADLVKREAIDIKSISYFILDEADEMVT-ALKEGLDSIIKEIPKARRTFLF 183
Query: 709 SATMP 723
+AT+P
Sbjct: 184 TATLP 188
>UniRef50_A4RYJ1 Cluster: Predicted protein; n=3; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 407
Score = 123 bits (296), Expect = 5e-27
Identities = 83/224 (37%), Positives = 113/224 (50%), Gaps = 10/224 (4%)
Frame = +1
Query: 94 KDQGSYDGPPGMDPGTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPC 273
+D S D G + G T +F D+ L E L R + A GF+ PS +Q +
Sbjct: 16 RDDTSTDARAGANVGERATS----SASFGDLQLDERLTRALRAAGFDAPSPVQLACVPLG 71
Query: 274 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIAL--- 444
G DVIAQA+SGTGKT TF + L+++D R QAL LAPTRE A Q + + +
Sbjct: 72 RFGCDVIAQAKSGTGKTMTFVVIALERVDAGRRRTQALALAPTRECAVQTHECFVEMIEK 131
Query: 445 -----GDHLNAKCHAC--IGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIK 603
GD C +GG V+ED +L S HVVVGTPGR M+ ++ + +
Sbjct: 132 FKDMDGD-ARGGIETCLLVGGLPVKEDRARLASQPHVVVGTPGRTRQMLEEGSMACDGAR 190
Query: 604 LFVLDEADEMLSRGFKDQIHDVFKMLSADVXVILLSATMPDDVL 735
L +LDEAD +LS F+ + + ML V SAT +L
Sbjct: 191 LLILDEADALLSGTFERDVLFAYSMLPERKQVCAFSATYSKTLL 234
>UniRef50_Q23U16 Cluster: DEAD/DEAH box helicase family protein;
n=1; Tetrahymena thermophila SB210|Rep: DEAD/DEAH box
helicase family protein - Tetrahymena thermophila SB210
Length = 475
Score = 123 bits (296), Expect = 5e-27
Identities = 56/106 (52%), Positives = 78/106 (73%)
Frame = +1
Query: 424 QKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIK 603
+KV++ LG+ L +AC GGT+ +ED ++L GV VVVGTPGRV D+I ++ L + +K
Sbjct: 186 KKVIMYLGEFLKVSAYACTGGTDPKEDRKRLREGVQVVVGTPGRVLDLIQKKTLVTDHLK 245
Query: 604 LFVLDEADEMLSRGFKDQIHDVFKMLSADVXVILLSATMPDDVLEV 741
LF+LDEADEML RGFKDQI+ +F+ L D+ V L SATM ++LE+
Sbjct: 246 LFILDEADEMLGRGFKDQINKIFQNLPHDIQVALFSATMAPEILEI 291
Score = 105 bits (253), Expect = 9e-22
Identities = 55/84 (65%), Positives = 65/84 (77%), Gaps = 1/84 (1%)
Frame = +1
Query: 208 RGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQAL 387
+ + +YGFEKPS IQQ I+P I+G+D IAQAQSGTGKTATFSI+ LQ IDTS QAL
Sbjct: 47 QNVLSYGFEKPSPIQQCGIIPIIKGKDTIAQAQSGTGKTATFSIATLQVIDTSSPHTQAL 106
Query: 388 ILAPTRELAQQ-IQKVVIALGDHL 456
ILAPTRELAQQ I ++ LG +L
Sbjct: 107 ILAPTRELAQQTITRIFFILGVNL 130
>UniRef50_Q88NB7 Cluster: ATP-dependent RNA helicase rhlB; n=18;
Proteobacteria|Rep: ATP-dependent RNA helicase rhlB -
Pseudomonas putida (strain KT2440)
Length = 398
Score = 123 bits (296), Expect = 5e-27
Identities = 71/199 (35%), Positives = 111/199 (55%), Gaps = 10/199 (5%)
Frame = +1
Query: 175 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 354
F D L EL+ I+ GF + IQ + + ++G+D I +AQ+GTGKTA F ISI+ Q
Sbjct: 11 FHDFKLSNELMHAIHDLGFPYCTPIQAQVLGYTLRGQDAIGRAQTGTGKTAAFLISIISQ 70
Query: 355 IDTS-------IRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQ 513
+ + + E +ALI+APTREL QI K AL + + +GG + + ++
Sbjct: 71 LQQTPPPKERYMGEPRALIIAPTRELVVQIAKDAAALTKYTGLNVMSFVGGMDFDKQLKA 130
Query: 514 LES-GVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKML--S 684
LE+ ++V TPGR+ D R +H + +++ VLDEAD ML GF Q+ + +
Sbjct: 131 LEARHCDILVATPGRLLDFNQRGEVHLDMVEVMVLDEADRMLDMGFIPQVRQIIRQTPPK 190
Query: 685 ADVXVILLSATMPDDVLEV 741
++ +L SAT DDV+ +
Sbjct: 191 SERQTLLFSATFTDDVMNL 209
>UniRef50_Q9HXE5 Cluster: ATP-dependent RNA helicase rhlB; n=22;
Gammaproteobacteria|Rep: ATP-dependent RNA helicase rhlB
- Pseudomonas aeruginosa
Length = 397
Score = 123 bits (296), Expect = 5e-27
Identities = 72/199 (36%), Positives = 110/199 (55%), Gaps = 10/199 (5%)
Frame = +1
Query: 175 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 354
F D NL L+ I+ GF + IQ + + ++G+D I +AQ+GTGKTA F ISI+ Q
Sbjct: 11 FHDFNLAPSLMHAIHDLGFPYCTPIQAQVLGFTLRGQDAIGRAQTGTGKTAAFLISIITQ 70
Query: 355 I-------DTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQ 513
+ + + E +ALI+APTREL QI K AL + +GG + + ++Q
Sbjct: 71 LLQTPPPKERYMGEPRALIIAPTRELVVQIAKDAAALTKYTGLNVMTFVGGMDFDKQLKQ 130
Query: 514 LESG-VHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKML--S 684
LE+ ++V TPGR+ D R +H + +++ VLDEAD ML GF Q+ + +
Sbjct: 131 LEARFCDILVATPGRLLDFNQRGEVHLDMVEVMVLDEADRMLDMGFIPQVRQIIRQTPHK 190
Query: 685 ADVXVILLSATMPDDVLEV 741
+ +L SAT DDV+ +
Sbjct: 191 GERQTLLFSATFTDDVMNL 209
>UniRef50_O49289 Cluster: Putative DEAD-box ATP-dependent RNA
helicase 29; n=4; core eudicotyledons|Rep: Putative
DEAD-box ATP-dependent RNA helicase 29 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 845
Score = 123 bits (296), Expect = 5e-27
Identities = 61/191 (31%), Positives = 109/191 (57%), Gaps = 3/191 (1%)
Frame = +1
Query: 175 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 354
F+ +NL + I G++ P+ IQ++ + + G DV+A A++G+GKTA F I +L++
Sbjct: 30 FESLNLGPNVFNAIKKKGYKVPTPIQRKTMPLILSGVDVVAMARTGSGKTAAFLIPMLEK 89
Query: 355 IDTSIRE--CQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGV 528
+ + + +ALIL+PTR+LA+Q K LG + + +GG ++ + +L G
Sbjct: 90 LKQHVPQGGVRALILSPTRDLAEQTLKFTKELGKFTDLRVSLLVGGDSMEDQFEELTKGP 149
Query: 529 HVVVGTPGRVYDMITR-RALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVXVIL 705
V++ TPGR+ +++ + T++ V DEAD + GF +Q+H + LS + +L
Sbjct: 150 DVIIATPGRLMHLLSEVDDMTLRTVEYVVFDEADSLFGMGFAEQLHQILTQLSENRQTLL 209
Query: 706 LSATMPDDVLE 738
SAT+P + E
Sbjct: 210 FSATLPSALAE 220
>UniRef50_O22907 Cluster: DEAD-box ATP-dependent RNA helicase 24;
n=7; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 24 - Arabidopsis thaliana (Mouse-ear cress)
Length = 760
Score = 123 bits (296), Expect = 5e-27
Identities = 69/196 (35%), Positives = 105/196 (53%), Gaps = 5/196 (2%)
Frame = +1
Query: 151 DWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTAT 330
D + V+TF+D +++ I +EKP+AIQ +A+ + GRDVI A++G+GKTA
Sbjct: 222 DVHRPVKTFEDCGFSSQIMSAIKKQAYEKPTAIQCQALPIVLSGRDVIGIAKTGSGKTAA 281
Query: 331 FSISILQQI--DTSIRECQA---LILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNV 495
F + ++ I ++ + +I APTRELA QI + A GG +
Sbjct: 282 FVLPMIVHIMDQPELQRDEGPIGVICAPTRELAHQIFLEAKKFSKAYGLRVSAVYGGMSK 341
Query: 496 REDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFK 675
E ++L++G +VV TPGR+ DM+ +AL VLDEAD M GF+ Q+ +
Sbjct: 342 HEQFKELKAGCEIVVATPGRLIDMLKMKALTMMRASYLVLDEADRMFDLGFEPQVRSIVG 401
Query: 676 MLSADVXVILLSATMP 723
+ D +L SATMP
Sbjct: 402 QIRPDRQTLLFSATMP 417
>UniRef50_Q9UHL0 Cluster: ATP-dependent RNA helicase DDX25; n=111;
Eumetazoa|Rep: ATP-dependent RNA helicase DDX25 - Homo
sapiens (Human)
Length = 483
Score = 123 bits (296), Expect = 5e-27
Identities = 75/194 (38%), Positives = 117/194 (60%), Gaps = 5/194 (2%)
Frame = +1
Query: 166 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI--MPCIQGRDVIAQAQSGTGKTATFSI 339
V+TF+++ LKEELL+GIYA GF +PS IQ+ A+ M +++IAQ+QSGTGKTA F +
Sbjct: 96 VKTFEELRLKEELLKGIYAMGFNRPSKIQEMALPMMLAHPPQNLIAQSQSGTGKTAAFVL 155
Query: 340 SILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDH-LNAKCHACIGGTNVREDIRQL 516
++L +++ Q L LAPT ELA Q +VV +G ++ + I G + R
Sbjct: 156 AMLSRVNALELFPQCLCLAPTYELALQTGRVVEQMGKFCVDVQVMYAIRGNRIP---RGT 212
Query: 517 ESGVHVVVGTPGRVYDMITR-RALHANTIKLFVLDEADEML-SRGFKDQIHDVFKMLSAD 690
+ +++GTPG V D + + + I++FVLDEAD M+ ++GF D + + L ++
Sbjct: 213 DITKQIIIGTPGTVLDWCFKLKLIDLTKIRVFVLDEADVMIDTQGFSDHSIRIQRALPSE 272
Query: 691 VXVILLSATMPDDV 732
++L SAT D V
Sbjct: 273 CQMLLFSATFEDSV 286
>UniRef50_Q6MQY6 Cluster: ATP-dependent RNA helicase; n=1;
Bdellovibrio bacteriovorus|Rep: ATP-dependent RNA
helicase - Bdellovibrio bacteriovorus
Length = 473
Score = 122 bits (295), Expect = 7e-27
Identities = 66/187 (35%), Positives = 101/187 (54%)
Frame = +1
Query: 172 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 351
TF +MNL LL + KP+ +Q +AI + G D+IA AQ+G+GKT F++S+L
Sbjct: 34 TFQEMNLAPVLLPALTKMKISKPTPVQSQAIPASLDGSDIIAIAQTGSGKTLAFALSLLT 93
Query: 352 QIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVH 531
+ E + LIL P+RE+AQQI KV + L + IGGT + QL+
Sbjct: 94 TLQKK-PEARGLILVPSREMAQQIYKVFLELCAEMPVSVCLAIGGTTGSKQANQLKKNPR 152
Query: 532 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVXVILLS 711
+++ TPGR+ D ++ L +++ VLDEAD ML GF Q+ + L ++ S
Sbjct: 153 LIIATPGRMNDHLSGNKLLLQNVEVIVLDEADRMLDMGFAPQLRTIQSTLRGPRQTMMFS 212
Query: 712 ATMPDDV 732
A+ +V
Sbjct: 213 ASFGSNV 219
>UniRef50_Q1Q4V2 Cluster: Similar to ATP-independent RNA helicase
DbpA; n=1; Candidatus Kuenenia stuttgartiensis|Rep:
Similar to ATP-independent RNA helicase DbpA -
Candidatus Kuenenia stuttgartiensis
Length = 407
Score = 122 bits (295), Expect = 7e-27
Identities = 61/186 (32%), Positives = 103/186 (55%)
Frame = +1
Query: 175 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 354
F D+ L ++L+ + G+ + + IQ+ G D+ A A++G+GKTA +I ++Q+
Sbjct: 3 FSDLELSADILKALDKMGYNEMTPIQEATYPIIFAGHDLCALAETGSGKTAACAIPLIQK 62
Query: 355 IDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHV 534
+D S+ Q L++ PTREL Q + + + + +A GG + I +++ VH+
Sbjct: 63 VDPSLDAIQGLVIVPTRELCMQYVEEIRKIAAKTDVIPYAVYGGFDRAAQIARVKQTVHI 122
Query: 535 VVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVXVILLSA 714
+V TPGR+ D++ L IK +LDEADE+L GF + I + + +L SA
Sbjct: 123 LVATPGRLIDLLYEGILSFARIKCVILDEADELLKVGFLEDIEFILSCIRHKHQTLLFSA 182
Query: 715 TMPDDV 732
TMPDD+
Sbjct: 183 TMPDDI 188
>UniRef50_Q1I3W1 Cluster: ATP-dependent RNA helicase RhlE, DEAD box
family; n=21; Pseudomonadaceae|Rep: ATP-dependent RNA
helicase RhlE, DEAD box family - Pseudomonas entomophila
(strain L48)
Length = 634
Score = 122 bits (295), Expect = 7e-27
Identities = 70/200 (35%), Positives = 109/200 (54%), Gaps = 10/200 (5%)
Frame = +1
Query: 172 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 351
+F + L E L+R I A G+ +P+ +QQRAI +QGRD++ AQ+GTGKT F++ IL+
Sbjct: 2 SFASLGLSEALVRAIEAAGYTQPTPVQQRAIPAVLQGRDLMVAAQTGTGKTGGFALPILE 61
Query: 352 QI------DTSIR----ECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVRE 501
++ D S R + + L+L PTRELA Q+ LN GG +
Sbjct: 62 RLFPGGHPDKSQRHGPRQPRVLVLTPTRELAAQVHDSFKVYARDLNFISACIFGGVGMNP 121
Query: 502 DIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKML 681
++ + GV V+V PGR+ D+ + ++ + +++ VLDEAD ML GF + V L
Sbjct: 122 QVQAMAKGVDVLVACPGRLLDLAGQGSVDLSRVEILVLDEADRMLDMGFIHDVKKVLARL 181
Query: 682 SADVXVILLSATMPDDVLEV 741
A +L SAT D+ ++
Sbjct: 182 PAKRQNLLFSATFSKDITDL 201
>UniRef50_Q12QV2 Cluster: DEAD/DEAH box helicase-like protein; n=16;
Gammaproteobacteria|Rep: DEAD/DEAH box helicase-like
protein - Shewanella denitrificans (strain OS217 / ATCC
BAA-1090 / DSM 15013)
Length = 433
Score = 122 bits (295), Expect = 7e-27
Identities = 67/186 (36%), Positives = 101/186 (54%), Gaps = 5/186 (2%)
Frame = +1
Query: 175 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 354
F+ + E+LR I G++ + +QQ+AI +G DV+A AQ+GTGKTA F++ ILQ+
Sbjct: 3 FESFSFAPEILRAIAECGYQNMTPVQQQAIPAIRRGEDVLASAQTGTGKTAAFALPILQK 62
Query: 355 IDTSIRECQ-----ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLE 519
+ Q ALIL PTRELA Q+ + A H+N GG + ++L+
Sbjct: 63 MHERPMTVQHSNARALILTPTRELAAQVADNISAYSKHMNISVLTIYGGMKMATQAQKLK 122
Query: 520 SGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVXV 699
G ++V TPGR+ + I L + ++ VLDEAD ML GF I + + ++
Sbjct: 123 QGADIIVATPGRLLEHIVACNLSLSNVEFLVLDEADRMLDMGFSTDIQKILQAVNKKRQN 182
Query: 700 ILLSAT 717
+L SAT
Sbjct: 183 LLFSAT 188
>UniRef50_A5FH33 Cluster: DEAD/DEAH box helicase domain protein;
n=7; Flavobacteria|Rep: DEAD/DEAH box helicase domain
protein - Flavobacterium johnsoniae UW101
Length = 450
Score = 122 bits (295), Expect = 7e-27
Identities = 64/193 (33%), Positives = 107/193 (55%), Gaps = 1/193 (0%)
Frame = +1
Query: 166 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 345
+ TF+ NL + L + + GF P+ IQ+++ + GRD++ AQ+GTGKT + + +
Sbjct: 1 MSTFEKFNLPKSLQKAVDELGFVTPTPIQEKSFSVIMSGRDMMGIAQTGTGKTFAYLLPL 60
Query: 346 LQQID-TSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLES 522
L+ T + ++L PTREL Q+ + V L +++ K GG N+ + +
Sbjct: 61 LKLYKFTHTNTPKIVVLVPTRELVVQVVEEVEKLTKYMSVKTLGIYGGVNINTQKKAVYE 120
Query: 523 GVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVXVI 702
GV ++VGTPGR D+ + + + V+DE DEML+ GF+ Q+ +F M+ I
Sbjct: 121 GVDILVGTPGRTMDLALDAVVRFDETQKLVIDEFDEMLNLGFRPQLTSLFAMMKTKRQNI 180
Query: 703 LLSATMPDDVLEV 741
L SATM D+V ++
Sbjct: 181 LFSATMTDEVDDI 193
>UniRef50_Q54Y81 Cluster: Putative RNA helicase; n=2; Dictyostelium
discoideum|Rep: Putative RNA helicase - Dictyostelium
discoideum AX4
Length = 834
Score = 122 bits (295), Expect = 7e-27
Identities = 64/176 (36%), Positives = 97/176 (55%), Gaps = 8/176 (4%)
Frame = +1
Query: 166 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 345
+ T+ + NL E+L I G+EKPS IQ ++I + GRD++ A++G+GKT F I +
Sbjct: 412 IRTWQESNLPREILEAIRQLGYEKPSPIQMQSIPISLTGRDILGIAETGSGKTCAFVIPM 471
Query: 346 LQQI--------DTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVRE 501
L I DT AL++APTREL QQI+K H + + +GG ++ +
Sbjct: 472 LIYISKQPRLTKDTEADGPYALVMAPTRELVQQIEKETRNFAQHFGFRVVSLVGGQSIED 531
Query: 502 DIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDV 669
Q+ G +++ TPGR+ D + +R L N VLDEAD M+ GF+ Q+ V
Sbjct: 532 QAYQVSKGCEIIIATPGRLNDCLEKRYLVLNQCNYIVLDEADMMIDLGFEPQVTSV 587
>UniRef50_Q92GV2 Cluster: ATP-dependent RNA helicase RhlE; n=10;
Rickettsia|Rep: ATP-dependent RNA helicase RhlE -
Rickettsia conorii
Length = 414
Score = 122 bits (294), Expect = 9e-27
Identities = 67/188 (35%), Positives = 106/188 (56%), Gaps = 1/188 (0%)
Frame = +1
Query: 181 DMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQID 360
+ NL EEL+ + +P+ IQ+++I + G D++A +Q+G+GKT + +L ID
Sbjct: 7 NFNLSEELIIALETMNITEPTEIQKQSIPVAMAGSDILASSQTGSGKTLAY---LLPLID 63
Query: 361 TSIR-ECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVV 537
+ I+ + ALIL PTRELA QI + + IGG + + QL+ V+
Sbjct: 64 SFIKNKTTALILVPTRELATQIHSTLNKVTTSYKINSAVLIGGEPMPKQFIQLKKNPKVI 123
Query: 538 VGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVXVILLSAT 717
+GTPGR+ D + R +L + I + VLDE D ML G K+Q+ ++ K L V++ SAT
Sbjct: 124 IGTPGRIIDHLNRGSLKIDRIGITVLDEMDRMLDMGMKEQLEEINKFLPEKRQVLMFSAT 183
Query: 718 MPDDVLEV 741
MP ++ V
Sbjct: 184 MPKHIIAV 191
>UniRef50_Q5GRS8 Cluster: Superfamily II DNA/RNA helicase; n=4;
Wolbachia|Rep: Superfamily II DNA/RNA helicase -
Wolbachia sp. subsp. Brugia malayi (strain TRS)
Length = 408
Score = 122 bits (294), Expect = 9e-27
Identities = 65/193 (33%), Positives = 106/193 (54%), Gaps = 1/193 (0%)
Frame = +1
Query: 166 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 345
+ +F +M L L + + F P+ +Q +AI ++G+D++ AQ+GTGKT F+I +
Sbjct: 1 MNSFYEMGLPLLLAQALDKNSFSVPTPVQAQAIPLALKGKDILGSAQTGTGKTLAFAIPL 60
Query: 346 LQQIDTSIRECQALILAPTRELAQQI-QKVVIALGDHLNAKCHACIGGTNVREDIRQLES 522
+ ++ AL++ PTRELAQQ+ ++ L + K IGG + + QL+
Sbjct: 61 IAKLLGEPNASTALVIVPTRELAQQVTNEIGKLLLKNSVLKIALLIGGEPIFRQLNQLQR 120
Query: 523 GVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVXVI 702
+V+GTPGR+ D I R+ L N + VLDE D M GF QI + K L +
Sbjct: 121 RPRIVIGTPGRIIDHIERKTLITNNVSTLVLDEVDRMFDMGFGIQIEGIMKYLPKMRQNL 180
Query: 703 LLSATMPDDVLEV 741
+ SAT+P D++++
Sbjct: 181 MFSATLPGDIVKL 193
>UniRef50_Q0BSI7 Cluster: ATP-dependent RNA helicase; n=12;
Alphaproteobacteria|Rep: ATP-dependent RNA helicase -
Granulobacter bethesdensis (strain ATCC BAA-1260 /
CGDNIH1)
Length = 763
Score = 122 bits (294), Expect = 9e-27
Identities = 68/189 (35%), Positives = 102/189 (53%), Gaps = 3/189 (1%)
Frame = +1
Query: 175 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSI---SI 345
F D+ L E + R I G+ P+ IQ +AI + GRDV+ AQ+GTGKTA+F++ I
Sbjct: 225 FADLGLSEPVQRAITEMGYLHPTPIQAQAIPVVLMGRDVLGCAQTGTGKTASFTLPMMDI 284
Query: 346 LQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESG 525
L R ++LIL PTRELA Q+ + + G +L IGG ++ + L G
Sbjct: 285 LSDRRARARMPRSLILEPTRELALQVAENFVKYGQYLKLNHALLIGGESMNDQRDVLSKG 344
Query: 526 VHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVXVIL 705
V V++ TPGR+ D+ R L ++ V+DEAD ML GF + + +L + +
Sbjct: 345 VDVLIATPGRLIDLFDRGGLLLTDTRILVIDEADRMLDMGFIPDVERIVSLLPHNRQTLF 404
Query: 706 LSATMPDDV 732
SATM ++
Sbjct: 405 FSATMAPEI 413
>UniRef50_Q8GY84 Cluster: DEAD-box ATP-dependent RNA helicase 10;
n=34; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
10 - Arabidopsis thaliana (Mouse-ear cress)
Length = 456
Score = 122 bits (294), Expect = 9e-27
Identities = 69/205 (33%), Positives = 115/205 (56%), Gaps = 13/205 (6%)
Frame = +1
Query: 157 DQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFS 336
++VV+TF ++ ++EEL++ G++ PS IQ A+ ++G+DVI AQ+G+GKT F+
Sbjct: 5 NEVVKTFAELGVREELVKACERLGWKNPSKIQAEALPFALEGKDVIGLAQTGSGKTGAFA 64
Query: 337 ISILQQIDTSIRECQ------------ALILAPTRELAQQIQKVVIALGDHLNAKCHACI 480
I ILQ + + + + A +L+PTRELA QI + ALG ++ +C +
Sbjct: 65 IPILQALLEYVYDSEPKKGRRPDPAFFACVLSPTRELAIQIAEQFEALGADISLRCAVLV 124
Query: 481 GGTNVREDIRQLESGVHVVVGTPGRVYD-MITRRALHANTIKLFVLDEADEMLSRGFKDQ 657
GG + + L HV+V TPGR++D M + ++K VLDEAD +L+ F+
Sbjct: 125 GGIDRMQQTIALGKRPHVIVATPGRLWDHMSDTKGFSLKSLKYLVLDEADRLLNEDFEKS 184
Query: 658 IHDVFKMLSADVXVILLSATMPDDV 732
++ + + + + L SATM V
Sbjct: 185 LNQILEEIPLERKTFLFSATMTKKV 209
>UniRef50_Q5T1V6 Cluster: Probable ATP-dependent RNA helicase DDX59;
n=34; Euteleostomi|Rep: Probable ATP-dependent RNA
helicase DDX59 - Homo sapiens (Human)
Length = 619
Score = 122 bits (294), Expect = 9e-27
Identities = 66/187 (35%), Positives = 107/187 (57%), Gaps = 1/187 (0%)
Frame = +1
Query: 175 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 354
F+ +L E L + G+E P+ IQ + I + GRD++A A +G+GKTA F + ++ +
Sbjct: 205 FEHCSLPEVLNHNLKKSGYEVPTPIQMQMIPVGLLGRDILASADTGSGKTAAFLLPVIMR 264
Query: 355 IDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNVREDIRQLESGVH 531
+ ALIL PTRELA QI++ L L K +GG + + +L+ V
Sbjct: 265 ALFESKTPSALILTPTRELAIQIERQAKELMSGLPRMKTVLLVGGLPLPPQLYRLQQHVK 324
Query: 532 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVXVILLS 711
V++ TPGR+ D+I + ++ +K+ V+DEAD ML GF+ Q+ D+ + + D IL+S
Sbjct: 325 VIIATPGRLLDIIKQSSVELCGVKIVVVDEADTMLKMGFQQQVLDILENIPNDCQTILVS 384
Query: 712 ATMPDDV 732
AT+P +
Sbjct: 385 ATIPTSI 391
>UniRef50_UPI0000DB7667 Cluster: PREDICTED: similar to CG32344-PA;
n=1; Apis mellifera|Rep: PREDICTED: similar to
CG32344-PA - Apis mellifera
Length = 743
Score = 122 bits (293), Expect = 1e-26
Identities = 63/185 (34%), Positives = 100/185 (54%), Gaps = 2/185 (1%)
Frame = +1
Query: 175 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 354
F M L +L+GI G++ P+ IQ++ I ++GRD++A A++G+GKTA F I + ++
Sbjct: 38 FQSMALSFPILKGILKRGYKIPTPIQRKTIPLALEGRDIVAMARTGSGKTACFLIPLFEK 97
Query: 355 IDTSIRE--CQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGV 528
+ + +ALIL+PTRELA Q K + LG K +GG N+ +
Sbjct: 98 LKIRQAKVGARALILSPTRELALQTLKFIKELGRFTGLKATIILGGDNMENQFSAIHGNP 157
Query: 529 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVXVILL 708
+++ TPGR + L N I+ V DEAD + GF +QI+++ L +L
Sbjct: 158 DILIATPGRFLHICIEMDLQLNNIEYVVFDEADRLFEMGFGEQINEIINRLPESRQTLLF 217
Query: 709 SATMP 723
SAT+P
Sbjct: 218 SATLP 222
>UniRef50_Q9RKJ0 Cluster: ATP-dependent RNA helicase; n=2;
Streptomyces|Rep: ATP-dependent RNA helicase -
Streptomyces coelicolor
Length = 740
Score = 122 bits (293), Expect = 1e-26
Identities = 67/190 (35%), Positives = 105/190 (55%), Gaps = 3/190 (1%)
Frame = +1
Query: 172 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 351
TF D+ L E ++R + G P IQ I + G+D++ + ++G+GKT +F + L
Sbjct: 62 TFADLGLPEGVVRKLAQNGVTTPFPIQAATIPDALAGKDILGRGRTGSGKTLSFGLPTLA 121
Query: 352 QID---TSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLES 522
+ T + +A+IL PTRELA Q+ + GD L K GGT++ I LE
Sbjct: 122 TLAGGRTEKHKPRAVILTPTRELAMQVADALQPYGDVLGLKMKVVCGGTSMGNQIYALER 181
Query: 523 GVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVXVI 702
GV V+V TPGR+ D+I R A +++ VLDEAD+M GF ++ ++ + A +
Sbjct: 182 GVDVLVATPGRLRDIINRGACSLENVQIAVLDEADQMSDLGFLPEVTELLDQVPAGGQRM 241
Query: 703 LLSATMPDDV 732
L SATM +++
Sbjct: 242 LFSATMENEI 251
>UniRef50_Q12B10 Cluster: DEAD/DEAH box helicase-like; n=13;
Proteobacteria|Rep: DEAD/DEAH box helicase-like -
Polaromonas sp. (strain JS666 / ATCC BAA-500)
Length = 422
Score = 122 bits (293), Expect = 1e-26
Identities = 65/179 (36%), Positives = 99/179 (55%), Gaps = 6/179 (3%)
Frame = +1
Query: 205 LRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSI----R 372
LR I G+ P+AIQ +AI + GRDV+ AQ+G+GKTA F++ +LQQ+ + R
Sbjct: 17 LRAIGDKGYRAPTAIQSQAIPAILLGRDVVGSAQTGSGKTAAFALPMLQQLANAPTGTPR 76
Query: 373 ECQALILAPTRELAQQIQKVVIALGDHL--NAKCHACIGGTNVREDIRQLESGVHVVVGT 546
+ LIL PTRELA Q+ + + +L K GG ++ + L G +VV T
Sbjct: 77 PTRGLILVPTRELAAQVGEAIAGFAKYLPQRVKVAVVFGGVSINPQMMNLRGGADIVVAT 136
Query: 547 PGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVXVILLSATMP 723
PGR+ D++ AL + + VLDEAD +L GF +++ + ++L + SAT P
Sbjct: 137 PGRLLDLLEHNALKISEVSTLVLDEADRLLDLGFGEELGRILELLPPRRQNLFFSATFP 195
>UniRef50_Q11WD3 Cluster: Possible ATP-dependent RNA helicase; n=4;
Sphingobacteriales|Rep: Possible ATP-dependent RNA
helicase - Cytophaga hutchinsonii (strain ATCC 33406 /
NCIMB 9469)
Length = 463
Score = 122 bits (293), Expect = 1e-26
Identities = 64/187 (34%), Positives = 103/187 (55%), Gaps = 1/187 (0%)
Frame = +1
Query: 175 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 354
F+++ L +LL I G+ +P+ IQ +AI + G D+I AQ+GTGKTA +++ IL +
Sbjct: 7 FEELKLNRQLLNAIEEAGYTEPTEIQSKAIPQILAGHDIIGVAQTGTGKTAAYALPILMK 66
Query: 355 IDTSI-RECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVH 531
I + +A+I PTREL QI+ + L + + + A GG + L+ GV
Sbjct: 67 IKYAQGHNPRAVIFGPTRELVMQIEIAMKQLAKYTDLRIVALYGGIGPKLQKEHLQKGVD 126
Query: 532 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVXVILLS 711
++V TPGR D+ + +K VLDEAD+M+ GF Q+ + +++ +L S
Sbjct: 127 IIVATPGRFLDLYLEEEIVLKEVKTMVLDEADKMMDMGFMPQLRKMLEVIPRKRQNLLFS 186
Query: 712 ATMPDDV 732
ATM + V
Sbjct: 187 ATMSERV 193
>UniRef50_Q0AR94 Cluster: DEAD/DEAH box helicase domain protein;
n=4; Proteobacteria|Rep: DEAD/DEAH box helicase domain
protein - Maricaulis maris (strain MCS10)
Length = 787
Score = 122 bits (293), Expect = 1e-26
Identities = 66/178 (37%), Positives = 102/178 (57%), Gaps = 6/178 (3%)
Frame = +1
Query: 226 GFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQI---DTSIRECQ---AL 387
G+ + +Q I +GRD++ AQ+G+GKTA F +++ + + D AL
Sbjct: 19 GYAALTEVQSAVIAEEAEGRDLLVSAQTGSGKTAAFGMAMAKTLLGDDDQFNRPDLPMAL 78
Query: 388 ILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVYDM 567
I+APTRELA Q+Q+ + L + +C+GG + R + + LE G H+VVGTPGR+ D
Sbjct: 79 IVAPTRELALQVQRELAWLYGEARGQIASCVGGMDPRAERKALERGCHIVVGTPGRLRDH 138
Query: 568 ITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVXVILLSATMPDDVLEV 741
I R AL + +K VLDEADEML GF++ + + A +L SAT+P + ++
Sbjct: 139 IERGALDMSQLKAVVLDEADEMLDFGFREDLEYILDAAPASRRTLLFSATVPRAIADI 196
>UniRef50_A6QHA1 Cluster: ATP-dependent RNA helicase DEAD/DEAH box
family protein; n=16; Staphylococcus|Rep: ATP-dependent
RNA helicase DEAD/DEAH box family protein -
Staphylococcus aureus (strain Newman)
Length = 448
Score = 122 bits (293), Expect = 1e-26
Identities = 61/187 (32%), Positives = 104/187 (55%), Gaps = 1/187 (0%)
Frame = +1
Query: 175 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 354
F+ NL+ L+ + FEKP+ IQ R I ++ ++I Q+Q+GTGK+ F + ++Q
Sbjct: 6 FEQFNLESSLIDAVKDLNFEKPTEIQNRIIPRILKRTNLIGQSQTGTGKSHAFLLPLMQL 65
Query: 355 IDTSIRECQALILAPTRELAQQIQKVVIALGD-HLNAKCHACIGGTNVREDIRQLESGVH 531
ID+ I+E QA+++APTRELAQQ+ L IGGT++ +D ++ +
Sbjct: 66 IDSEIKEPQAIVVAPTRELAQQLYDAANHLSQFKAGVSVKVFIGGTDIEKDRQRCNAQPQ 125
Query: 532 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVXVILLS 711
+++GTP R+ D+ LH + V+DEAD M+ G + + + L + + + S
Sbjct: 126 LIIGTPTRINDLAKTGHLHVHLASYLVIDEADLMIDLGLIEDVDYIAARLEDNANIAVFS 185
Query: 712 ATMPDDV 732
AT+P +
Sbjct: 186 ATIPQQL 192
>UniRef50_A5BNE7 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 339
Score = 122 bits (293), Expect = 1e-26
Identities = 59/97 (60%), Positives = 72/97 (74%)
Frame = +1
Query: 181 DMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQID 360
D N+ L + G EKPSAIQQ+ I+P +G DVI QAQSGTGKTATF ILQQ++
Sbjct: 16 DSNMNGLCLLNVLCEGIEKPSAIQQKGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLN 75
Query: 361 TSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCH 471
+ +CQAL+LAPTRELAQQI+KV+ ALGDHLN K +
Sbjct: 76 EELTQCQALVLAPTRELAQQIEKVMRALGDHLNVKIY 112
>UniRef50_Q9N5K1 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 630
Score = 122 bits (293), Expect = 1e-26
Identities = 70/201 (34%), Positives = 110/201 (54%), Gaps = 15/201 (7%)
Frame = +1
Query: 166 VETFDDMNLKEELLRGIYAY-GFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSIS 342
+ +F +M + LL + G P+AIQ + I + GRD+I A +G+GKT TF +
Sbjct: 188 IGSFLEMKFPKSLLEFMQKQKGIVTPTAIQIQGIPVALSGRDMIGIASTGSGKTMTFVLP 247
Query: 343 IL-----QQIDTSIRECQA---LILAPTRELAQQIQKVVIALGDHLNA------KCHACI 480
++ Q++ + LI+ P+RELA+QI ++I + D L + CI
Sbjct: 248 LVMFCLEQEMKLPFMRSEGPFGLIIVPSRELARQIFDLIIEMFDALGKAGLPEMRAGLCI 307
Query: 481 GGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQI 660
GG + E + + G+H+VV TPGR+ DM+T++ ++ + VLDEAD ML GF+D+I
Sbjct: 308 GGVPIGEQAKDVRDGIHIVVATPGRLSDMLTKKIINLEVCRYLVLDEADRMLDMGFEDEI 367
Query: 661 HDVFKMLSADVXVILLSATMP 723
+F A +L SATMP
Sbjct: 368 KSIFYFFKAQRQTLLFSATMP 388
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 813,741,288
Number of Sequences: 1657284
Number of extensions: 18482551
Number of successful extensions: 58146
Number of sequences better than 10.0: 500
Number of HSP's better than 10.0 without gapping: 53232
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 56424
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 60500186565
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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