Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc29h24
         (543 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcript...    25   2.1  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           23   4.9  
AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          23   4.9  
AB090817-1|BAC57909.1|  344|Anopheles gambiae gag-like protein p...    23   4.9  
CR954257-4|CAJ14155.1|  196|Anopheles gambiae predicted protein ...    23   8.6  
CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein ...    23   8.6  

>AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcriptase
            protein.
          Length = 988

 Score = 24.6 bits (51), Expect = 2.1
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = -3

Query: 97   LDHGSFHARSPTYVKNEEDRRCHKICT 17
            ++H  FH      ++NE  +RCH   T
Sbjct: 948  VEHVLFHCPRSDRIRNEMQQRCHSRVT 974


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 23.4 bits (48), Expect = 4.9
 Identities = 8/22 (36%), Positives = 15/22 (68%)
 Frame = +1

Query: 73   VRGMNRDLVNAGKHLPRFAHLA 138
            V  +NRDL+N  + +P+ + L+
Sbjct: 1084 VPNLNRDLINLFRQMPKVSELS 1105


>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 23.4 bits (48), Expect = 4.9
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -1

Query: 87  VHSTHGHLRTSRTRKT 40
           +H THG L  SRT K+
Sbjct: 208 MHGTHGSLMGSRTEKS 223


>AB090817-1|BAC57909.1|  344|Anopheles gambiae gag-like protein
           protein.
          Length = 344

 Score = 23.4 bits (48), Expect = 4.9
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = -2

Query: 131 CANRGKCLPAFTRSRFIPRTVTYVRQER 48
           C N  KCL   TRS+ +  T +Y+   R
Sbjct: 312 CTNSVKCLDCGTRSQNLHATGSYMCPRR 339


>CR954257-4|CAJ14155.1|  196|Anopheles gambiae predicted protein
           protein.
          Length = 196

 Score = 22.6 bits (46), Expect = 8.6
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = -3

Query: 67  PTYVKNEEDRRCHKICTTMY 8
           PTYV + E ++C+++ T  Y
Sbjct: 91  PTYVYHPETQQCYQMYTRGY 110


>CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein
           protein.
          Length = 1087

 Score = 22.6 bits (46), Expect = 8.6
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = -2

Query: 320 YRKCAHAFFRCNSCLFKFSLTRWLISSDHGS 228
           YR C   FFR N  L +     + + S +G+
Sbjct: 497 YRVCIEKFFRMNRELHRLQTMYYEMMSQNGA 527


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 537,786
Number of Sequences: 2352
Number of extensions: 10430
Number of successful extensions: 55
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 55
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 55
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 50040333
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)