Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc29h23
(616 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024876-8|AAF60889.1| 187|Caenorhabditis elegans Hypothetical ... 153 1e-37
AF100656-7|AAF99964.2| 615|Caenorhabditis elegans Hypothetical ... 31 0.86
Z81510-5|CAB04165.1| 188|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z81453-7|CAB03797.2| 457|Caenorhabditis elegans Hypothetical pr... 28 4.6
U97017-1|AAB52363.1| 2643|Caenorhabditis elegans Temporarily ass... 28 4.6
AF264764-1|AAQ14296.1| 457|Caenorhabditis elegans sterol reduct... 28 4.6
Z82286-2|CAB05306.1| 397|Caenorhabditis elegans Hypothetical pr... 28 6.1
AL033536-1|CAA22138.1| 908|Caenorhabditis elegans Hypothetical ... 28 6.1
AF039718-3|AAB96744.1| 329|Caenorhabditis elegans Hypothetical ... 28 6.1
Z81533-3|CAB04335.1| 327|Caenorhabditis elegans Hypothetical pr... 27 8.1
Z67884-1|CAA91807.1| 347|Caenorhabditis elegans Hypothetical pr... 27 8.1
Z54284-1|CAA91059.1| 2198|Caenorhabditis elegans Hypothetical pr... 27 8.1
U58750-13|AAB00653.1| 616|Caenorhabditis elegans Hypothetical p... 27 8.1
U58749-5|AAU05597.1| 1551|Caenorhabditis elegans Hypothetical pr... 27 8.1
U58749-4|AAU05598.1| 1592|Caenorhabditis elegans Hypothetical pr... 27 8.1
L14745-4|AAA27921.1| 419|Caenorhabditis elegans Hypothetical pr... 27 8.1
L14745-3|AAM15539.1| 450|Caenorhabditis elegans Hypothetical pr... 27 8.1
AY241927-1|AAO85276.1| 330|Caenorhabditis elegans beta-1,3-gala... 27 8.1
AF016672-6|AAM34394.2| 165|Caenorhabditis elegans Vig (drosophi... 27 8.1
AC024746-16|AAF60408.1| 330|Caenorhabditis elegans Squashed vul... 27 8.1
>AC024876-8|AAF60889.1| 187|Caenorhabditis elegans Hypothetical
protein Y94H6A.8 protein.
Length = 187
Score = 153 bits (370), Expect = 1e-37
Identities = 68/150 (45%), Positives = 94/150 (62%), Gaps = 1/150 (0%)
Frame = +1
Query: 22 PLVISTKMSLGKFLALDKLSNFFNVIRQNGGIRASLYKLYRQDDVKDGVLVGEDKYGNKY 201
P + +MSL +L +DK+ F ++++ GG++A L K Y D + G LVG D +GN+Y
Sbjct: 35 PTKFTLQMSLKAWLGIDKIQKFGQMVKEIGGVKAVLKKRYLMDATRVGTLVGSDNFGNRY 94
Query: 202 YENPRFFYSRNRWVEYSDKYYLNYDGSQVPAEWFGWLHYKTDLPPHQDPSRPHYKWMADH 381
YEN +F RNRWVE+ DK +L+YD +QVP EW WLH+ TD P P P W+ +H
Sbjct: 95 YENNAYFVPRNRWVEFPDKVWLDYDATQVPPEWHSWLHHITDDAPSVKPP-PTQDWVLEH 153
Query: 382 TENLS-GTTAQYVPYSTTRPKVEAWEPKRK 468
EN S +YVPYSTTR K++ W+P K
Sbjct: 154 KENTSIYADKKYVPYSTTRTKIQGWQPGEK 183
>AF100656-7|AAF99964.2| 615|Caenorhabditis elegans Hypothetical
protein F49F1.8 protein.
Length = 615
Score = 30.7 bits (66), Expect = 0.86
Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 3/65 (4%)
Frame = -1
Query: 385 RCGPPSTCSGDDSDPDAEANRFCSVANQTIQREPD---FHHSSSNTCPSTRPICSCCKRN 215
RC S C + SD D+++ A TI+ P+ H S N + +C CCK +
Sbjct: 397 RCHQDSECRVESSDSDSDSLNQDEHAVHTIEENPNTKSSHPKSEN--QRFQDVCQCCK-S 453
Query: 214 VGSHS 200
VG S
Sbjct: 454 VGHKS 458
>Z81510-5|CAB04165.1| 188|Caenorhabditis elegans Hypothetical
protein F21D9.8 protein.
Length = 188
Score = 29.1 bits (62), Expect = 2.6
Identities = 15/50 (30%), Positives = 18/50 (36%)
Frame = -1
Query: 337 AEANRFCSVANQTIQREPDFHHSSSNTCPSTRPICSCCKRNVGSHSICYH 188
AEA C + D+HH CP + CS C N YH
Sbjct: 117 AEALSMCKHCLTVGVTDDDWHHEG---CPKAKDTCSVCANNTNRVGCKYH 163
>Z81453-7|CAB03797.2| 457|Caenorhabditis elegans Hypothetical
protein B0250.9 protein.
Length = 457
Score = 28.3 bits (60), Expect = 4.6
Identities = 18/70 (25%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Frame = -2
Query: 513 FYKMIFSANLFLKTVFAFRLPGFHFGSGRTVRHILSGRARKIFGVVRHPLVVG-TTRILM 337
F +I +F ++A + +HFG+G +V I + FG+ HP ++ + +
Sbjct: 166 FNSIILIFAIFAVLIWAALIATYHFGTGNSVTTI----SEFWFGIENHPKILDIDLKSFI 221
Query: 336 RRQIGFVV*P 307
R + FV+ P
Sbjct: 222 RTRFTFVIWP 231
>U97017-1|AAB52363.1| 2643|Caenorhabditis elegans Temporarily assigned
gene nameprotein 162 protein.
Length = 2643
Score = 28.3 bits (60), Expect = 4.6
Identities = 17/46 (36%), Positives = 21/46 (45%), Gaps = 5/46 (10%)
Frame = -1
Query: 439 WVG-SYCTAHIERSCQKDFRCGPPST-CSGDD---SDPDAEANRFC 317
WV + C IE +C +C P S C GDD D +AN C
Sbjct: 919 WVDPNACDNEIEFTCLNSKKCVPKSNLCDGDDDCGDGSDEDANGIC 964
>AF264764-1|AAQ14296.1| 457|Caenorhabditis elegans sterol reductase
protein.
Length = 457
Score = 28.3 bits (60), Expect = 4.6
Identities = 18/70 (25%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Frame = -2
Query: 513 FYKMIFSANLFLKTVFAFRLPGFHFGSGRTVRHILSGRARKIFGVVRHPLVVG-TTRILM 337
F +I +F ++A + +HFG+G +V I + FG+ HP ++ + +
Sbjct: 166 FNSIILIFAIFAVLIWAALIATYHFGTGNSVTTI----SEFWFGIENHPKILDIDLKSFI 221
Query: 336 RRQIGFVV*P 307
R + FV+ P
Sbjct: 222 RTRFTFVIWP 231
>Z82286-2|CAB05306.1| 397|Caenorhabditis elegans Hypothetical
protein W02A2.3 protein.
Length = 397
Score = 27.9 bits (59), Expect = 6.1
Identities = 14/54 (25%), Positives = 23/54 (42%), Gaps = 1/54 (1%)
Frame = -1
Query: 304 QTIQREP-DFHHSSSNTCPSTRPICSCCKRNVGSHSICYHICLLQLEHHPSHRP 146
++ Q++P F S CP +P C+C N + I I Q + + P
Sbjct: 163 RSAQQQPLRFSQYPSCPCPQNQPACTCSTNNQQNEQILVSISCCQQQETTTQAP 216
>AL033536-1|CAA22138.1| 908|Caenorhabditis elegans Hypothetical
protein Y53C10A.4 protein.
Length = 908
Score = 27.9 bits (59), Expect = 6.1
Identities = 20/48 (41%), Positives = 24/48 (50%)
Frame = -1
Query: 382 CGPPSTCSGDDSDPDAEANRFCSVANQTIQREPDFHHSSSNTCPSTRP 239
CG P S DDSD A + SVA T EP SSS++ S+ P
Sbjct: 673 CGLPHISSNDDSDSRFPAFKSSSVAMLT---EPYKSSSSSSSSTSSIP 717
>AF039718-3|AAB96744.1| 329|Caenorhabditis elegans Hypothetical
protein T12F5.2 protein.
Length = 329
Score = 27.9 bits (59), Expect = 6.1
Identities = 19/81 (23%), Positives = 29/81 (35%)
Frame = -1
Query: 430 SYCTAHIERSCQKDFRCGPPSTCSGDDSDPDAEANRFCSVANQTIQREPDFHHSSSNTCP 251
S C + KD RC S+C S+ R C++ + F + P
Sbjct: 27 SICMEEFDAIVPKDLRCMTCSSCKMSGSETSFHICRECTIQHHEYDIH-TFIDQEPSIHP 85
Query: 250 STRPICSCCKRNVGSHSICYH 188
ICS C + H+ +H
Sbjct: 86 DAFTICSTCV--LKDHNTTHH 104
>Z81533-3|CAB04335.1| 327|Caenorhabditis elegans Hypothetical
protein F36G9.5 protein.
Length = 327
Score = 27.5 bits (58), Expect = 8.1
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = +2
Query: 281 VRFPLNGLVGYTTKPICLRIRIRVVPTTSGW 373
+ FP NG + PI I +RV T GW
Sbjct: 171 IMFPGNGFCSHVAYPIYGSIMLRVTDTMFGW 201
>Z67884-1|CAA91807.1| 347|Caenorhabditis elegans Hypothetical
protein T14G8.2 protein.
Length = 347
Score = 27.5 bits (58), Expect = 8.1
Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Frame = +1
Query: 205 ENPRFFYSRNRWVEYSDKYYLNY--DGSQVPAEWFGWLHYKT 324
+NP + S V ++K+ +N+ D SQ+ + F WL YKT
Sbjct: 32 DNPLLYNSIREHVN-TEKFTVNFYTDQSQLKIKGFTWLFYKT 72
>Z54284-1|CAA91059.1| 2198|Caenorhabditis elegans Hypothetical
protein D2085.1 protein.
Length = 2198
Score = 27.5 bits (58), Expect = 8.1
Identities = 12/39 (30%), Positives = 18/39 (46%)
Frame = +1
Query: 184 KYGNKYYENPRFFYSRNRWVEYSDKYYLNYDGSQVPAEW 300
KYGN+ + P Y+ R S + D +PA+W
Sbjct: 273 KYGNRGHNQPCTHYATGRCYITSQNHGYAVDPDSLPADW 311
>U58750-13|AAB00653.1| 616|Caenorhabditis elegans Hypothetical
protein F55G1.13 protein.
Length = 616
Score = 27.5 bits (58), Expect = 8.1
Identities = 16/54 (29%), Positives = 24/54 (44%)
Frame = -1
Query: 466 CVSAPRLPLWVGSYCTAHIERSCQKDFRCGPPSTCSGDDSDPDAEANRFCSVAN 305
C A R S CT E + D C P++CS +P +N+ C++ N
Sbjct: 29 CYPANRTSATTCSECTCSDESTQTSDTTCTAPTSCS---PNPCTLSNQQCNMVN 79
>U58749-5|AAU05597.1| 1551|Caenorhabditis elegans Hypothetical protein
B0496.3a protein.
Length = 1551
Score = 27.5 bits (58), Expect = 8.1
Identities = 13/44 (29%), Positives = 20/44 (45%)
Frame = +1
Query: 316 YKTDLPPHQDPSRPHYKWMADHTENLSGTTAQYVPYSTTRPKVE 447
Y+T P P ++ A T + G + Y P+ TTRP +
Sbjct: 1114 YRTHRDSDYRPMSPTSRYTAAVTRDDRGKSTSYDPHETTRPSYD 1157
>U58749-4|AAU05598.1| 1592|Caenorhabditis elegans Hypothetical protein
B0496.3b protein.
Length = 1592
Score = 27.5 bits (58), Expect = 8.1
Identities = 13/44 (29%), Positives = 20/44 (45%)
Frame = +1
Query: 316 YKTDLPPHQDPSRPHYKWMADHTENLSGTTAQYVPYSTTRPKVE 447
Y+T P P ++ A T + G + Y P+ TTRP +
Sbjct: 1155 YRTHRDSDYRPMSPTSRYTAAVTRDDRGKSTSYDPHETTRPSYD 1198
>L14745-4|AAA27921.1| 419|Caenorhabditis elegans Hypothetical
protein C02F5.6a protein.
Length = 419
Score = 27.5 bits (58), Expect = 8.1
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = +1
Query: 295 EWFGWLHYKTDLPPHQDPSRPHYKWMADHTENLSGTT 405
E+ WL + PH PHY M ENLSG +
Sbjct: 276 EFSNWLEELSIRFPHYQIDPPHYIGMTRGYENLSGAS 312
>L14745-3|AAM15539.1| 450|Caenorhabditis elegans Hypothetical
protein C02F5.6b protein.
Length = 450
Score = 27.5 bits (58), Expect = 8.1
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = +1
Query: 295 EWFGWLHYKTDLPPHQDPSRPHYKWMADHTENLSGTT 405
E+ WL + PH PHY M ENLSG +
Sbjct: 276 EFSNWLEELSIRFPHYQIDPPHYIGMTRGYENLSGAS 312
>AY241927-1|AAO85276.1| 330|Caenorhabditis elegans
beta-1,3-galactosyltransferase protein.
Length = 330
Score = 27.5 bits (58), Expect = 8.1
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +1
Query: 115 IRASLYKLYRQDDVKDGVLVGEDKYGNKYYENPRF 219
I A L++ YR +DV G +G KY +PRF
Sbjct: 229 INAQLFRHYRNEDVSVGAWIG--GLDVKYVHDPRF 261
>AF016672-6|AAM34394.2| 165|Caenorhabditis elegans Vig (drosophila
vasa intronic gene)ortholog protein 1, isoform b
protein.
Length = 165
Score = 27.5 bits (58), Expect = 8.1
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = -3
Query: 146 CLYSLYREALIPPF*RITLKKLLSLSRAKNFPRDIFVDITR 24
CL+ ++ L+PPF + L LS+S + PR + I+R
Sbjct: 120 CLFLIFLFFLVPPFSLLLLSPALSISLLMSCPRFGLLVISR 160
>AC024746-16|AAF60408.1| 330|Caenorhabditis elegans Squashed vulva
protein 2 protein.
Length = 330
Score = 27.5 bits (58), Expect = 8.1
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +1
Query: 115 IRASLYKLYRQDDVKDGVLVGEDKYGNKYYENPRF 219
I A L++ YR +DV G +G KY +PRF
Sbjct: 229 INAQLFRHYRNEDVSVGAWIG--GLDVKYVHDPRF 261
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,738,557
Number of Sequences: 27780
Number of extensions: 380710
Number of successful extensions: 1087
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1038
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1086
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1332243108
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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