Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc29h21
(421 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF125959-3|AAD14731.1| 531|Caenorhabditis elegans Udp-glucurono... 30 0.58
Z78543-6|CAB01756.1| 2962|Caenorhabditis elegans Hypothetical pr... 29 1.0
Z78417-13|CAB01693.1| 2962|Caenorhabditis elegans Hypothetical p... 29 1.0
AF111934-1|AAD18003.1| 2962|Caenorhabditis elegans SDC-2 protein. 29 1.0
AL132952-8|CAB61142.2| 186|Caenorhabditis elegans Hypothetical ... 29 1.4
AL023845-7|CAA19542.1| 381|Caenorhabditis elegans Hypothetical ... 29 1.8
U28741-4|AAA68328.1| 747|Caenorhabditis elegans Hypothetical pr... 28 3.1
U23449-3|AAC24301.1| 579|Caenorhabditis elegans Nuclear hormone... 28 3.1
AF408758-1|AAO27837.1| 309|Caenorhabditis elegans nuclear recep... 28 3.1
AF273773-1|AAG15122.1| 555|Caenorhabditis elegans nuclear recep... 28 3.1
AF273772-1|AAG15121.1| 443|Caenorhabditis elegans nuclear recep... 28 3.1
Z69665-1|CAA93520.5| 1396|Caenorhabditis elegans Hypothetical pr... 27 4.1
AC006618-1|AAK68250.1| 762|Caenorhabditis elegans Hypothetical ... 27 4.1
Z68105-5|CAA92123.2| 729|Caenorhabditis elegans Hypothetical pr... 27 5.5
AL009066-1|CAA15625.2| 729|Caenorhabditis elegans Hypothetical ... 27 5.5
U97008-16|AAB52300.1| 303|Caenorhabditis elegans Serpentine rec... 27 7.2
U42436-12|AAF99901.1| 1206|Caenorhabditis elegans Guanylyl cycla... 27 7.2
U00048-6|AAB53828.1| 873|Caenorhabditis elegans Hypothetical pr... 27 7.2
AF024498-4|AAF39805.2| 319|Caenorhabditis elegans Serpentine re... 27 7.2
AB201388-1|BAE78828.1| 1152|Caenorhabditis elegans recepotor typ... 27 7.2
Z68161-9|CAA92298.2| 688|Caenorhabditis elegans Hypothetical pr... 26 9.5
AY551963-1|AAS65427.1| 458|Caenorhabditis elegans histone acety... 26 9.5
AL590342-3|CAC35860.1| 421|Caenorhabditis elegans Hypothetical ... 26 9.5
AL032622-5|CAA21500.1| 421|Caenorhabditis elegans Y66A7A.6 prot... 26 9.5
AF106581-4|AAC78211.1| 458|Caenorhabditis elegans Myst family h... 26 9.5
AF031842-1|AAC13678.1| 421|Caenorhabditis elegans GLY8 protein. 26 9.5
>AF125959-3|AAD14731.1| 531|Caenorhabditis elegans
Udp-glucuronosyltransferase protein14 protein.
Length = 531
Score = 30.3 bits (65), Expect = 0.58
Identities = 23/80 (28%), Positives = 42/80 (52%), Gaps = 6/80 (7%)
Frame = +1
Query: 31 VIVP-FAHEINDTG-LYEYDVLAYVDSVEF-DGKQFEEFVQKLILPSSFNDSEKVL---Y 192
++VP FA + N+ L + D ++ DG++F + V+++++ +ND+ KVL
Sbjct: 395 LMVPIFADQFNNANMLARHGGAIPYDKLDLADGEKFTKTVREMVINPKYNDNAKVLLIIL 454
Query: 193 YNEASKNKNMIYKALEFTTE 252
N+ K + K LEF E
Sbjct: 455 LNQPIDPKLNLMKHLEFAME 474
>Z78543-6|CAB01756.1| 2962|Caenorhabditis elegans Hypothetical
protein C35C5.1 protein.
Length = 2962
Score = 29.5 bits (63), Expect = 1.0
Identities = 17/83 (20%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Frame = +1
Query: 94 YVDSVEFDGKQFEEFVQKLILPS-SFNDSEKVLYYNEASKNKNMIYKALEFTTESSWVKS 270
Y+ + + + ++F ++++ + ++ S K+L + A K + K L++ T W K+
Sbjct: 259 YLQAGKLVSPKCDQFREQIVATAVEYDGSVKMLQFENALKKHSGKQKRLKYQT--GWWKA 316
Query: 271 NKFNWKIFCNGFIYDKKSKALYV 339
+K +++ NG++ K+ L +
Sbjct: 317 SKSHYERAVNGYVAMPKTPVLSI 339
>Z78417-13|CAB01693.1| 2962|Caenorhabditis elegans Hypothetical
protein C35C5.1 protein.
Length = 2962
Score = 29.5 bits (63), Expect = 1.0
Identities = 17/83 (20%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Frame = +1
Query: 94 YVDSVEFDGKQFEEFVQKLILPS-SFNDSEKVLYYNEASKNKNMIYKALEFTTESSWVKS 270
Y+ + + + ++F ++++ + ++ S K+L + A K + K L++ T W K+
Sbjct: 259 YLQAGKLVSPKCDQFREQIVATAVEYDGSVKMLQFENALKKHSGKQKRLKYQT--GWWKA 316
Query: 271 NKFNWKIFCNGFIYDKKSKALYV 339
+K +++ NG++ K+ L +
Sbjct: 317 SKSHYERAVNGYVAMPKTPVLSI 339
>AF111934-1|AAD18003.1| 2962|Caenorhabditis elegans SDC-2 protein.
Length = 2962
Score = 29.5 bits (63), Expect = 1.0
Identities = 17/83 (20%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Frame = +1
Query: 94 YVDSVEFDGKQFEEFVQKLILPS-SFNDSEKVLYYNEASKNKNMIYKALEFTTESSWVKS 270
Y+ + + + ++F ++++ + ++ S K+L + A K + K L++ T W K+
Sbjct: 259 YLQAGKLVSPKCDQFREQIVATAVEYDGSVKMLQFENALKKHSGKQKRLKYQT--GWWKA 316
Query: 271 NKFNWKIFCNGFIYDKKSKALYV 339
+K +++ NG++ K+ L +
Sbjct: 317 SKSHYERAVNGYVAMPKTPVLSI 339
>AL132952-8|CAB61142.2| 186|Caenorhabditis elegans Hypothetical
protein Y51H4A.8 protein.
Length = 186
Score = 29.1 bits (62), Expect = 1.4
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = +1
Query: 43 FAHEINDTGLYEYDVLAYVDSVEFDGKQFEE-FVQKLILPSSFNDSEKVLYYNEASKN 213
F++E+N LY YD LA EF+ QF++ + Q++++ + VL N N
Sbjct: 31 FSYEMNPPALYTYDSLA-----EFENGQFDQAYAQRVVVSDVQSAINDVLQANSIPLN 83
>AL023845-7|CAA19542.1| 381|Caenorhabditis elegans Hypothetical
protein Y51B9A.9 protein.
Length = 381
Score = 28.7 bits (61), Expect = 1.8
Identities = 13/62 (20%), Positives = 32/62 (51%)
Frame = +1
Query: 151 ILPSSFNDSEKVLYYNEASKNKNMIYKALEFTTESSWVKSNKFNWKIFCNGFIYDKKSKA 330
+LPS F ++ +V+ +++ S+ + +I K + +W + ++FC I ++
Sbjct: 21 LLPSQFGNAMEVIAFDQISERRVVIKKVVLPENFDNWQHWRRAQRELFCTLHIQEENFVK 80
Query: 331 LY 336
+Y
Sbjct: 81 MY 82
>U28741-4|AAA68328.1| 747|Caenorhabditis elegans Hypothetical
protein F35D2.4 protein.
Length = 747
Score = 27.9 bits (59), Expect = 3.1
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = -2
Query: 114 KLHTVHVS*DVVLVKSRVVNFVSKRHNNFVTNR 16
KL+ VH+ V V +++NF +K N +V R
Sbjct: 314 KLYPVHILNSAVRVNGQLLNFANKDRNRWVLTR 346
>U23449-3|AAC24301.1| 579|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 22 protein.
Length = 579
Score = 27.9 bits (59), Expect = 3.1
Identities = 24/90 (26%), Positives = 40/90 (44%)
Frame = +1
Query: 106 VEFDGKQFEEFVQKLILPSSFNDSEKVLYYNEASKNKNMIYKALEFTTESSWVKSNKFNW 285
VE + K FE + +S ND K++Y + ++ +++ E E+ +K FN+
Sbjct: 303 VEVENKIFELVDHYVRTEASLNDRRKIMYTD--TQIRDVFDTTCECPYENHQLK--PFNY 358
Query: 286 KIFCNGFIYDKKSKALYVKLHNVTSTLNKN 375
K FC +D YV L+KN
Sbjct: 359 KSFCGFVKHDFVMILDYVNQFPEFQALHKN 388
>AF408758-1|AAO27837.1| 309|Caenorhabditis elegans nuclear receptor
NHR-22 protein.
Length = 309
Score = 27.9 bits (59), Expect = 3.1
Identities = 24/90 (26%), Positives = 40/90 (44%)
Frame = +1
Query: 106 VEFDGKQFEEFVQKLILPSSFNDSEKVLYYNEASKNKNMIYKALEFTTESSWVKSNKFNW 285
VE + K FE + +S ND K++Y + ++ +++ E E+ +K FN+
Sbjct: 33 VEVENKIFELVDHYVRTEASLNDRRKIMYTD--TQIRDVFDTTCECPYENHQLK--PFNY 88
Query: 286 KIFCNGFIYDKKSKALYVKLHNVTSTLNKN 375
K FC +D YV L+KN
Sbjct: 89 KSFCGFVKHDFVMILDYVNQFPEFQALHKN 118
>AF273773-1|AAG15122.1| 555|Caenorhabditis elegans nuclear receptor
NHR-22 protein.
Length = 555
Score = 27.9 bits (59), Expect = 3.1
Identities = 24/90 (26%), Positives = 40/90 (44%)
Frame = +1
Query: 106 VEFDGKQFEEFVQKLILPSSFNDSEKVLYYNEASKNKNMIYKALEFTTESSWVKSNKFNW 285
VE + K FE + +S ND K++Y + ++ +++ E E+ +K FN+
Sbjct: 279 VEVENKIFELVDHYVRTEASLNDRRKIMYTD--TQIRDVFDTTCECPYENHQLK--PFNY 334
Query: 286 KIFCNGFIYDKKSKALYVKLHNVTSTLNKN 375
K FC +D YV L+KN
Sbjct: 335 KSFCGFVKHDFVMILDYVNQFPEFQALHKN 364
>AF273772-1|AAG15121.1| 443|Caenorhabditis elegans nuclear receptor
NHR-22 protein.
Length = 443
Score = 27.9 bits (59), Expect = 3.1
Identities = 24/90 (26%), Positives = 40/90 (44%)
Frame = +1
Query: 106 VEFDGKQFEEFVQKLILPSSFNDSEKVLYYNEASKNKNMIYKALEFTTESSWVKSNKFNW 285
VE + K FE + +S ND K++Y + ++ +++ E E+ +K FN+
Sbjct: 167 VEVENKIFELVDHYVRTEASLNDRRKIMYTD--TQIRDVFDTTCECPYENHQLK--PFNY 222
Query: 286 KIFCNGFIYDKKSKALYVKLHNVTSTLNKN 375
K FC +D YV L+KN
Sbjct: 223 KSFCGFVKHDFVMILDYVNQFPEFQALHKN 252
>Z69665-1|CAA93520.5| 1396|Caenorhabditis elegans Hypothetical
protein ZK897.1 protein.
Length = 1396
Score = 27.5 bits (58), Expect = 4.1
Identities = 18/58 (31%), Positives = 24/58 (41%), Gaps = 3/58 (5%)
Frame = +1
Query: 10 YNPIGNK--VIVPFAHEIND-TGLYEYDVLAYVDSVEFDGKQFEEFVQKLILPSSFND 174
Y P+ K I P A D + D + DS+ FD F VQ+L L N+
Sbjct: 733 YKPVPPKQSTIAPKAQGFQDKASKHGMDAMIQADSINFDHDHFYSDVQRLTLDFRINE 790
>AC006618-1|AAK68250.1| 762|Caenorhabditis elegans Hypothetical
protein C45B2.6 protein.
Length = 762
Score = 27.5 bits (58), Expect = 4.1
Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Frame = +1
Query: 91 AYVDSVEFDGKQFEEFVQKLILP-SSFNDSEKV-LYYNEASKNKNMIYKALEFTTESSWV 264
+Y+D +E+ K+F+E + L P + ND V L E + +Y A+ F+ S++V
Sbjct: 87 SYIDDLEYLWKEFDESITHLNNPINVINDLVPVMLREKELQSECSAVYFAI-FSGFSNYV 145
Query: 265 KSNK 276
K K
Sbjct: 146 KEEK 149
>Z68105-5|CAA92123.2| 729|Caenorhabditis elegans Hypothetical
protein F13E6.2 protein.
Length = 729
Score = 27.1 bits (57), Expect = 5.5
Identities = 11/45 (24%), Positives = 26/45 (57%)
Frame = +1
Query: 106 VEFDGKQFEEFVQKLILPSSFNDSEKVLYYNEASKNKNMIYKALE 240
+E ++ +EF QK + + + D +K+L+ K+ +IY+ ++
Sbjct: 302 MEIIDQKIKEFKQKTLPSAKYFDDQKLLHLIPGEKDDQVIYEKMK 346
>AL009066-1|CAA15625.2| 729|Caenorhabditis elegans Hypothetical
protein F13E6.2 protein.
Length = 729
Score = 27.1 bits (57), Expect = 5.5
Identities = 11/45 (24%), Positives = 26/45 (57%)
Frame = +1
Query: 106 VEFDGKQFEEFVQKLILPSSFNDSEKVLYYNEASKNKNMIYKALE 240
+E ++ +EF QK + + + D +K+L+ K+ +IY+ ++
Sbjct: 302 MEIIDQKIKEFKQKTLPSAKYFDDQKLLHLIPGEKDDQVIYEKMK 346
>U97008-16|AAB52300.1| 303|Caenorhabditis elegans Serpentine
receptor, class sx protein24 protein.
Length = 303
Score = 26.6 bits (56), Expect = 7.2
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = -3
Query: 413 LNFNIYLIMSNITFLLSVLVTLCNLTY 333
L+ N Y +M + L+S+LVT C +
Sbjct: 117 LSINYYYLMVTLCALISLLVTFCKFVF 143
>U42436-12|AAF99901.1| 1206|Caenorhabditis elegans Guanylyl cyclase
protein 8 protein.
Length = 1206
Score = 26.6 bits (56), Expect = 7.2
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = +1
Query: 7 EYNPIGNKVIVPFAHEINDTGLYEYDV 87
+ N N ++ PF I D GL E DV
Sbjct: 358 DVNSFDNTIVGPFIERIKDVGLTEADV 384
>U00048-6|AAB53828.1| 873|Caenorhabditis elegans Hypothetical
protein C05D11.8 protein.
Length = 873
Score = 26.6 bits (56), Expect = 7.2
Identities = 11/36 (30%), Positives = 18/36 (50%)
Frame = +1
Query: 34 IVPFAHEINDTGLYEYDVLAYVDSVEFDGKQFEEFV 141
++PF + DTG D + + SV + K E+V
Sbjct: 210 LIPFLYSAGDTGQLARDAVLLILSVSAEDKSIAEYV 245
>AF024498-4|AAF39805.2| 319|Caenorhabditis elegans Serpentine
receptor, class x protein102 protein.
Length = 319
Score = 26.6 bits (56), Expect = 7.2
Identities = 14/33 (42%), Positives = 21/33 (63%), Gaps = 6/33 (18%)
Frame = -3
Query: 410 NFNIYLIMSNITFLLSVLVTL------CNLTYN 330
N N+ +I+ IT+L +L+T+ CNLTYN
Sbjct: 139 NQNLTIILLAITWLAGILLTVITSVDTCNLTYN 171
>AB201388-1|BAE78828.1| 1152|Caenorhabditis elegans recepotor type
guanyly cyclase protein.
Length = 1152
Score = 26.6 bits (56), Expect = 7.2
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = +1
Query: 7 EYNPIGNKVIVPFAHEINDTGLYEYDV 87
+ N N ++ PF I D GL E DV
Sbjct: 332 DVNSFDNTIVGPFIERIKDVGLTEADV 358
>Z68161-9|CAA92298.2| 688|Caenorhabditis elegans Hypothetical
protein F20C5.5 protein.
Length = 688
Score = 26.2 bits (55), Expect = 9.5
Identities = 20/86 (23%), Positives = 36/86 (41%)
Frame = +1
Query: 100 DSVEFDGKQFEEFVQKLILPSSFNDSEKVLYYNEASKNKNMIYKALEFTTESSWVKSNKF 279
D V++ K E ++ S N + +L E K KN+++ L+ E + F
Sbjct: 261 DEVDYLTKNLESLNPSQLVTSLENKDDYLLVTVEFQKRKNILFSELKKKNEEIKMLQESF 320
Query: 280 NWKIFCNGFIYDKKSKALYVKLHNVT 357
N ++ I K L ++ N+T
Sbjct: 321 N--VYQKDSIEKVMEKFLELQHQNLT 344
>AY551963-1|AAS65427.1| 458|Caenorhabditis elegans histone
acetyltransferase protein.
Length = 458
Score = 26.2 bits (55), Expect = 9.5
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = +1
Query: 70 LYEYDVLAYVDSVEFDGKQFEEFVQKLILPSSFNDSEKVLYYN 198
+Y +D L++ E DG++ + + Q L L + K LYY+
Sbjct: 234 IYSHDKLSFF---EIDGRKNKSYAQNLCLLAKLFLDHKTLYYD 273
>AL590342-3|CAC35860.1| 421|Caenorhabditis elegans Hypothetical
protein Y66A7A.6 protein.
Length = 421
Score = 26.2 bits (55), Expect = 9.5
Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +1
Query: 118 GKQFEEFVQKLILPSSFNDSEKVLYYNEA-SKNKNMIYKALEFTTES 255
GKQ + ++ +S++ S V+++NEA S MI +EFT +S
Sbjct: 91 GKQAHKLCEEEKYDASYSTSVVVIHHNEALSTILRMINGIIEFTPKS 137
>AL032622-5|CAA21500.1| 421|Caenorhabditis elegans Y66A7A.6
protein.
Length = 421
Score = 26.2 bits (55), Expect = 9.5
Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +1
Query: 118 GKQFEEFVQKLILPSSFNDSEKVLYYNEA-SKNKNMIYKALEFTTES 255
GKQ + ++ +S++ S V+++NEA S MI +EFT +S
Sbjct: 91 GKQAHKLCEEEKYDASYSTSVVVIHHNEALSTILRMINGIIEFTPKS 137
>AF106581-4|AAC78211.1| 458|Caenorhabditis elegans Myst family
histone acetyltransferase-like protein 1 protein.
Length = 458
Score = 26.2 bits (55), Expect = 9.5
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = +1
Query: 70 LYEYDVLAYVDSVEFDGKQFEEFVQKLILPSSFNDSEKVLYYN 198
+Y +D L++ E DG++ + + Q L L + K LYY+
Sbjct: 234 IYSHDKLSFF---EIDGRKNKSYAQNLCLLAKLFLDHKTLYYD 273
>AF031842-1|AAC13678.1| 421|Caenorhabditis elegans GLY8 protein.
Length = 421
Score = 26.2 bits (55), Expect = 9.5
Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +1
Query: 118 GKQFEEFVQKLILPSSFNDSEKVLYYNEA-SKNKNMIYKALEFTTES 255
GKQ + ++ +S++ S V+++NEA S MI +EFT +S
Sbjct: 91 GKQAHKLCEEEKYDASYSTSVVVIHHNEALSTILRMINGIIEFTPKS 137
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,590,899
Number of Sequences: 27780
Number of extensions: 166136
Number of successful extensions: 549
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 530
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 549
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 682028672
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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