Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc29h19
(579 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X63527-1|CAA45090.1| 196|Homo sapiens ribosomal protein L19 pro... 240 2e-63
S56985-1|AAB25672.1| 196|Homo sapiens ribosomal protein L19 pro... 240 2e-63
BX537435-1|CAD97677.1| 205|Homo sapiens hypothetical protein pr... 240 2e-63
BC095445-1|AAH95445.1| 196|Homo sapiens ribosomal protein L19 p... 240 2e-63
BC066315-1|AAH66315.1| 196|Homo sapiens ribosomal protein L19 p... 240 2e-63
BC062709-1|AAH62709.1| 196|Homo sapiens ribosomal protein L19 p... 240 2e-63
BC013016-1|AAH13016.1| 196|Homo sapiens ribosomal protein L19 p... 240 2e-63
BC000530-1|AAH00530.1| 196|Homo sapiens ribosomal protein L19 p... 240 2e-63
AK223082-1|BAD96802.1| 196|Homo sapiens ribosomal protein L19 v... 240 2e-63
AY157980-1|AAN76335.1| 173|Homo sapiens ribosomal protein L19 p... 209 5e-54
BC007587-1|AAH07587.1| 839|Homo sapiens LPHN1 protein protein. 30 6.8
AF307079-1|AAG27461.1| 1469|Homo sapiens lectomedin-2 protein. 30 6.8
AB065919-1|BAC06134.1| 1474|Homo sapiens seven transmembrane hel... 30 6.8
AB020628-1|BAA74844.2| 1566|Homo sapiens KIAA0821 protein protein. 30 6.8
>X63527-1|CAA45090.1| 196|Homo sapiens ribosomal protein L19
protein.
Length = 196
Score = 240 bits (588), Expect = 2e-63
Identities = 111/158 (70%), Positives = 128/158 (81%)
Frame = +3
Query: 45 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 224
MS L+LQKRLA+SV+RCGKKKVWLDPNE NEIAN NSRQ IRK+IKDGL+I+KPV VHSR
Sbjct: 1 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR 60
Query: 225 ARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLY 404
AR RKNT ARRKGRH G GKR+GTANARMP+K W +KKIDRH+Y
Sbjct: 61 ARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMY 120
Query: 405 HSLYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQ 518
HSLY+K KGNVFKNKR+LME+IH+ KA+KAR K+L+DQ
Sbjct: 121 HSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQ 158
>S56985-1|AAB25672.1| 196|Homo sapiens ribosomal protein L19
protein.
Length = 196
Score = 240 bits (588), Expect = 2e-63
Identities = 111/158 (70%), Positives = 128/158 (81%)
Frame = +3
Query: 45 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 224
MS L+LQKRLA+SV+RCGKKKVWLDPNE NEIAN NSRQ IRK+IKDGL+I+KPV VHSR
Sbjct: 1 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR 60
Query: 225 ARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLY 404
AR RKNT ARRKGRH G GKR+GTANARMP+K W +KKIDRH+Y
Sbjct: 61 ARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMY 120
Query: 405 HSLYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQ 518
HSLY+K KGNVFKNKR+LME+IH+ KA+KAR K+L+DQ
Sbjct: 121 HSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQ 158
>BX537435-1|CAD97677.1| 205|Homo sapiens hypothetical protein
protein.
Length = 205
Score = 240 bits (588), Expect = 2e-63
Identities = 111/158 (70%), Positives = 128/158 (81%)
Frame = +3
Query: 45 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 224
MS L+LQKRLA+SV+RCGKKKVWLDPNE NEIAN NSRQ IRK+IKDGL+I+KPV VHSR
Sbjct: 10 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR 69
Query: 225 ARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLY 404
AR RKNT ARRKGRH G GKR+GTANARMP+K W +KKIDRH+Y
Sbjct: 70 ARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMY 129
Query: 405 HSLYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQ 518
HSLY+K KGNVFKNKR+LME+IH+ KA+KAR K+L+DQ
Sbjct: 130 HSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQ 167
>BC095445-1|AAH95445.1| 196|Homo sapiens ribosomal protein L19
protein.
Length = 196
Score = 240 bits (588), Expect = 2e-63
Identities = 111/158 (70%), Positives = 128/158 (81%)
Frame = +3
Query: 45 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 224
MS L+LQKRLA+SV+RCGKKKVWLDPNE NEIAN NSRQ IRK+IKDGL+I+KPV VHSR
Sbjct: 1 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR 60
Query: 225 ARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLY 404
AR RKNT ARRKGRH G GKR+GTANARMP+K W +KKIDRH+Y
Sbjct: 61 ARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMY 120
Query: 405 HSLYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQ 518
HSLY+K KGNVFKNKR+LME+IH+ KA+KAR K+L+DQ
Sbjct: 121 HSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQ 158
>BC066315-1|AAH66315.1| 196|Homo sapiens ribosomal protein L19
protein.
Length = 196
Score = 240 bits (588), Expect = 2e-63
Identities = 111/158 (70%), Positives = 128/158 (81%)
Frame = +3
Query: 45 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 224
MS L+LQKRLA+SV+RCGKKKVWLDPNE NEIAN NSRQ IRK+IKDGL+I+KPV VHSR
Sbjct: 1 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR 60
Query: 225 ARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLY 404
AR RKNT ARRKGRH G GKR+GTANARMP+K W +KKIDRH+Y
Sbjct: 61 ARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMY 120
Query: 405 HSLYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQ 518
HSLY+K KGNVFKNKR+LME+IH+ KA+KAR K+L+DQ
Sbjct: 121 HSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQ 158
>BC062709-1|AAH62709.1| 196|Homo sapiens ribosomal protein L19
protein.
Length = 196
Score = 240 bits (588), Expect = 2e-63
Identities = 111/158 (70%), Positives = 128/158 (81%)
Frame = +3
Query: 45 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 224
MS L+LQKRLA+SV+RCGKKKVWLDPNE NEIAN NSRQ IRK+IKDGL+I+KPV VHSR
Sbjct: 1 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR 60
Query: 225 ARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLY 404
AR RKNT ARRKGRH G GKR+GTANARMP+K W +KKIDRH+Y
Sbjct: 61 ARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMY 120
Query: 405 HSLYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQ 518
HSLY+K KGNVFKNKR+LME+IH+ KA+KAR K+L+DQ
Sbjct: 121 HSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQ 158
>BC013016-1|AAH13016.1| 196|Homo sapiens ribosomal protein L19
protein.
Length = 196
Score = 240 bits (588), Expect = 2e-63
Identities = 111/158 (70%), Positives = 128/158 (81%)
Frame = +3
Query: 45 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 224
MS L+LQKRLA+SV+RCGKKKVWLDPNE NEIAN NSRQ IRK+IKDGL+I+KPV VHSR
Sbjct: 1 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR 60
Query: 225 ARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLY 404
AR RKNT ARRKGRH G GKR+GTANARMP+K W +KKIDRH+Y
Sbjct: 61 ARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMY 120
Query: 405 HSLYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQ 518
HSLY+K KGNVFKNKR+LME+IH+ KA+KAR K+L+DQ
Sbjct: 121 HSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQ 158
>BC000530-1|AAH00530.1| 196|Homo sapiens ribosomal protein L19
protein.
Length = 196
Score = 240 bits (588), Expect = 2e-63
Identities = 111/158 (70%), Positives = 128/158 (81%)
Frame = +3
Query: 45 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 224
MS L+LQKRLA+SV+RCGKKKVWLDPNE NEIAN NSRQ IRK+IKDGL+I+KPV VHSR
Sbjct: 1 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR 60
Query: 225 ARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLY 404
AR RKNT ARRKGRH G GKR+GTANARMP+K W +KKIDRH+Y
Sbjct: 61 ARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMY 120
Query: 405 HSLYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQ 518
HSLY+K KGNVFKNKR+LME+IH+ KA+KAR K+L+DQ
Sbjct: 121 HSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQ 158
>AK223082-1|BAD96802.1| 196|Homo sapiens ribosomal protein L19
variant protein.
Length = 196
Score = 240 bits (588), Expect = 2e-63
Identities = 111/158 (70%), Positives = 128/158 (81%)
Frame = +3
Query: 45 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 224
MS L+LQKRLA+SV+RCGKKKVWLDPNE NEIAN NSRQ IRK+IKDGL+I+KPV VHSR
Sbjct: 1 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR 60
Query: 225 ARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLY 404
AR RKNT ARRKGRH G GKR+GTANARMP+K W +KKIDRH+Y
Sbjct: 61 ARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMY 120
Query: 405 HSLYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQ 518
HSLY+K KGNVFKNKR+LME+IH+ KA+KAR K+L+DQ
Sbjct: 121 HSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQ 158
>AY157980-1|AAN76335.1| 173|Homo sapiens ribosomal protein L19
protein.
Length = 173
Score = 209 bits (511), Expect = 5e-54
Identities = 96/139 (69%), Positives = 110/139 (79%)
Frame = +3
Query: 102 KKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKNTEARRKGRHCGFG 281
KKVWLDPNE NEIAN NSRQ IRK+IKDGL+I+KPV VHSRAR RKNT ARRKGRH G G
Sbjct: 1 KKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSRARCRKNTLARRKGRHMGIG 60
Query: 282 KRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFKNKRVLM 461
KR+GTANARMP+K W +KKIDRH+YHSLY+K KGNVFKNKR+LM
Sbjct: 61 KRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMYHSLYLKVKGNVFKNKRILM 120
Query: 462 EYIHRKKAEKARTKMLSDQ 518
E+IH+ KA+KAR K+L+DQ
Sbjct: 121 EHIHKLKADKARKKLLADQ 139
>BC007587-1|AAH07587.1| 839|Homo sapiens LPHN1 protein protein.
Length = 839
Score = 29.9 bits (64), Expect = 6.8
Identities = 22/95 (23%), Positives = 42/95 (44%), Gaps = 4/95 (4%)
Frame = -3
Query: 574 IRSSRRLRASFTLLRRASAWSLSIFVLAFSAFFLWMYSMSTRLFLN--TLPFAFM*SEWY 401
IRSS L+ + L +W+L L F W + + LF+N ++ A++ + +
Sbjct: 395 IRSSSVLKPDSSRLDNIKSWALGAIALLFLLGLTWAFGL---LFINKESVVMAYLFTTFN 451
Query: 400 RCLSIFLAVLY--FRSNFLRTLCLCTHSSFCGIRA 302
+F+ V + + + C S+C IR+
Sbjct: 452 AFQGVFIFVFHCALQKKVHKEYSKCLRHSYCCIRS 486
>AF307079-1|AAG27461.1| 1469|Homo sapiens lectomedin-2 protein.
Length = 1469
Score = 29.9 bits (64), Expect = 6.8
Identities = 22/95 (23%), Positives = 42/95 (44%), Gaps = 4/95 (4%)
Frame = -3
Query: 574 IRSSRRLRASFTLLRRASAWSLSIFVLAFSAFFLWMYSMSTRLFLN--TLPFAFM*SEWY 401
IRSS L+ + L +W+L L F W + + LF+N ++ A++ + +
Sbjct: 1025 IRSSSVLKPDSSRLDNIKSWALGAIALLFLLGLTWAFGL---LFINKESVVMAYLFTTFN 1081
Query: 400 RCLSIFLAVLY--FRSNFLRTLCLCTHSSFCGIRA 302
+F+ V + + + C S+C IR+
Sbjct: 1082 AFQGVFIFVFHCALQKKVHKEYSKCLRHSYCCIRS 1116
>AB065919-1|BAC06134.1| 1474|Homo sapiens seven transmembrane helix
receptor protein.
Length = 1474
Score = 29.9 bits (64), Expect = 6.8
Identities = 22/95 (23%), Positives = 42/95 (44%), Gaps = 4/95 (4%)
Frame = -3
Query: 574 IRSSRRLRASFTLLRRASAWSLSIFVLAFSAFFLWMYSMSTRLFLN--TLPFAFM*SEWY 401
IRSS L+ + L +W+L L F W + + LF+N ++ A++ + +
Sbjct: 1030 IRSSSVLKPDSSRLDNIKSWALGAIALLFLLGLTWAFGL---LFINKESVVMAYLFTTFN 1086
Query: 400 RCLSIFLAVLY--FRSNFLRTLCLCTHSSFCGIRA 302
+F+ V + + + C S+C IR+
Sbjct: 1087 AFQGVFIFVFHCALQKKVHKEYSKCLRHSYCCIRS 1121
>AB020628-1|BAA74844.2| 1566|Homo sapiens KIAA0821 protein protein.
Length = 1566
Score = 29.9 bits (64), Expect = 6.8
Identities = 22/95 (23%), Positives = 42/95 (44%), Gaps = 4/95 (4%)
Frame = -3
Query: 574 IRSSRRLRASFTLLRRASAWSLSIFVLAFSAFFLWMYSMSTRLFLN--TLPFAFM*SEWY 401
IRSS L+ + L +W+L L F W + + LF+N ++ A++ + +
Sbjct: 1122 IRSSSVLKPDSSRLDNIKSWALGAIALLFLLGLTWAFGL---LFINKESVVMAYLFTTFN 1178
Query: 400 RCLSIFLAVLY--FRSNFLRTLCLCTHSSFCGIRA 302
+F+ V + + + C S+C IR+
Sbjct: 1179 AFQGVFIFVFHCALQKKVHKEYSKCLRHSYCCIRS 1213
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,446,240
Number of Sequences: 237096
Number of extensions: 1889128
Number of successful extensions: 3859
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 3692
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3849
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5985693436
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -