Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc29h06
         (561 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT023542-1|AAY84942.1|  305|Drosophila melanogaster IP09867p pro...    28   7.5  
AE013599-4030|AAM68332.1|  305|Drosophila melanogaster CG30429-P...    28   7.5  
AE014297-2060|AAN13670.1| 1285|Drosophila melanogaster CG18519-P...    28   9.9  
AE014297-2059|AAF55208.1| 1222|Drosophila melanogaster CG18519-P...    28   9.9  

>BT023542-1|AAY84942.1|  305|Drosophila melanogaster IP09867p
           protein.
          Length = 305

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 10/30 (33%), Positives = 19/30 (63%)
 Frame = -1

Query: 489 PRRFLKFPSPVAAIRFRQHDETSSQPKLAF 400
           PR +LK+P+ +    F++H + S++P   F
Sbjct: 221 PRNYLKYPNEIMRDLFQRHKDFSNKPHRRF 250


>AE013599-4030|AAM68332.1|  305|Drosophila melanogaster CG30429-PA
           protein.
          Length = 305

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 10/30 (33%), Positives = 19/30 (63%)
 Frame = -1

Query: 489 PRRFLKFPSPVAAIRFRQHDETSSQPKLAF 400
           PR +LK+P+ +    F++H + S++P   F
Sbjct: 221 PRNYLKYPNEIMRDLFQRHKDFSNKPHRRF 250


>AE014297-2060|AAN13670.1| 1285|Drosophila melanogaster CG18519-PB,
           isoform B protein.
          Length = 1285

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 14/50 (28%), Positives = 24/50 (48%)
 Frame = -3

Query: 520 AVRHLLCVPTAETLLEIPVTGSSHSFSPTR*NVVTTETSFSPAKIGDPMR 371
           A+ H+L V      L++   G ++    TR N+V   T+   +K+  P R
Sbjct: 765 AIAHMLKVSVNSIQLQVRRVGGAYGAKVTRGNIVACATALVASKLRRPAR 814


>AE014297-2059|AAF55208.1| 1222|Drosophila melanogaster CG18519-PA,
           isoform A protein.
          Length = 1222

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 14/50 (28%), Positives = 24/50 (48%)
 Frame = -3

Query: 520 AVRHLLCVPTAETLLEIPVTGSSHSFSPTR*NVVTTETSFSPAKIGDPMR 371
           A+ H+L V      L++   G ++    TR N+V   T+   +K+  P R
Sbjct: 702 AIAHMLKVSVNSIQLQVRRVGGAYGAKVTRGNIVACATALVASKLRRPAR 751


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,691,076
Number of Sequences: 53049
Number of extensions: 533967
Number of successful extensions: 1811
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1762
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1811
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2172596895
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)