Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc29g14
         (300 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    23   2.5  
AY578796-1|AAT07301.1|  437|Anopheles gambiae Gbb-60A protein.         23   3.3  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            22   5.7  
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    21   7.6  

>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
           precursor protein.
          Length = 1623

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = -2

Query: 38  GKHCDRCMP 12
           G HCD+C+P
Sbjct: 860 GPHCDQCLP 868



 Score = 22.2 bits (45), Expect = 4.3
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -2

Query: 38  GKHCDRCMPTQN 3
           G  CDRC+P  N
Sbjct: 313 GPDCDRCLPFYN 324


>AY578796-1|AAT07301.1|  437|Anopheles gambiae Gbb-60A protein.
          Length = 437

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = +1

Query: 124 PQFSLAVHHALASGETDVP 180
           PQF L V+  L   ETD P
Sbjct: 90  PQFLLNVYDQLQQEETDAP 108


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 14/43 (32%), Positives = 21/43 (48%)
 Frame = -1

Query: 249  KTLIQSALFTSFITFDQASFRQLGHVCFS*SQGMMHCE*KLWV 121
            KTLI+S    SF+T  Q   +  G   F+  + +M+     WV
Sbjct: 1358 KTLIKSQNGNSFLTLSQPEHKLAG--VFTPQEPLMNYVISCWV 1398


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
           growth factor receptorprotein.
          Length = 1433

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = +3

Query: 111 PYRAPTIFTRSASCPGFRRNRRAP 182
           PY   T FT  ++CP     +R P
Sbjct: 715 PYDNATTFTCVSNCPASHPYKRFP 738


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 328,372
Number of Sequences: 2352
Number of extensions: 6563
Number of successful extensions: 11
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 55
effective length of database: 434,619
effective search space used: 19123236
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)