Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc29g02
         (645 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    25   0.71 
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    25   0.71 
EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2 pr...    23   2.2  
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    23   2.2  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    22   3.8  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    22   3.8  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    22   3.8  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    22   3.8  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    22   3.8  

>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 24.6 bits (51), Expect = 0.71
 Identities = 9/27 (33%), Positives = 18/27 (66%)
 Frame = -1

Query: 87  KQHLREKHVKCVLKITRDSTMDEREVY 7
           K + +  H+K V++IT D+T+  + +Y
Sbjct: 55  KDYAKFIHIKAVVQITLDATLYVQNIY 81


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 24.6 bits (51), Expect = 0.71
 Identities = 9/27 (33%), Positives = 18/27 (66%)
 Frame = -1

Query: 87  KQHLREKHVKCVLKITRDSTMDEREVY 7
           K + +  H+K V++IT D+T+  + +Y
Sbjct: 55  KDYAKFIHIKAVVQITLDATLYVQNIY 81


>EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2
           protein.
          Length = 237

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = -3

Query: 334 CSNVNAQSTPCSNPKYFNASNSRFL 260
           C N  A+   C N   F+AS+ +FL
Sbjct: 44  CDNNVAELKTCGNGLAFDASDPKFL 68


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = -3

Query: 334 CSNVNAQSTPCSNPKYFNASNSRFL 260
           C N  A+   C N   F+AS+ +FL
Sbjct: 44  CDNNVAELKTCGNGLAFDASDPKFL 68


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 9/16 (56%), Positives = 9/16 (56%)
 Frame = +2

Query: 530 FAKRYNILYDRRFTFH 577
           F   YNILY  R  FH
Sbjct: 328 FENYYNILYFSRIMFH 343


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -3

Query: 55  CP*NYKRFHNGRKRSLP 5
           CP  +  F+N R+R +P
Sbjct: 606 CPEGFNEFYNQRRRWMP 622


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -3

Query: 55  CP*NYKRFHNGRKRSLP 5
           CP  +  F+N R+R +P
Sbjct: 839 CPEGFNEFYNQRRRWMP 855


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -3

Query: 55  CP*NYKRFHNGRKRSLP 5
           CP  +  F+N R+R +P
Sbjct: 839 CPEGFNEFYNQRRRWMP 855


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = +2

Query: 461 NLGYKFSRQNASNCHDSDITKFRFA 535
           N GY+ S+Q   NC      +  FA
Sbjct: 94  NQGYELSKQEIFNCCSKKSFRMNFA 118


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 141,759
Number of Sequences: 336
Number of extensions: 2941
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16552695
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)