Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc29f20
(371 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0538 + 29841801-29842280,29842559-29842930,29843013-29843309 49 1e-06
05_03_0396 - 13477465-13477761,13477970-13478341,13478414-13478887 48 2e-06
01_06_0447 + 29452194-29452361,29453232-29453317,29453403-294536... 46 1e-05
05_07_0283 - 28937027-28937110,28937211-28937549,28937641-289377... 44 4e-05
07_03_0117 + 13589997-13590998 43 7e-05
01_05_0410 + 21914995-21915168,21915268-21915353,21915446-219156... 43 7e-05
11_06_0633 + 25681756-25682061,25682961-25683329,25683419-25683733 42 2e-04
02_02_0134 + 7082462-7082627,7084199-7084325,7084404-7084611,708... 40 8e-04
02_01_0763 - 5665010-5665202,5665285-5665375,5665460-5666245,566... 39 0.001
06_03_0691 + 23552437-23552914,23555168-23555953,23556045-235561... 39 0.001
03_02_0489 + 8836306-8836500,8836906-8837082,8837175-8837321,883... 38 0.003
05_06_0233 + 26599068-26599466,26601214-26601829,26601871-266019... 34 0.031
01_01_0282 - 2349336-2349583,2349719-2349786,2349880-2349950,235... 34 0.041
05_01_0505 + 4207841-4208455,4209982-4210143,4210247-4210717 33 0.095
01_07_0083 + 40970890-40971015,40971886-40971994,40972679-409727... 32 0.17
10_07_0101 - 12872296-12873288 29 1.2
12_01_0019 - 135627-135983,136564-136797,137118-137196,137268-13... 29 1.5
11_01_0021 - 143576-143932,144434-144667,144988-145066,145138-14... 29 1.5
05_04_0010 - 17132810-17132935,17133017-17133169,17133202-171332... 29 1.5
03_05_0791 + 27736978-27737217,27737648-27739191,27739512-277397... 28 2.7
05_04_0386 + 20822376-20822982,20823715-20824244,20824315-20825127 27 3.6
01_01_0877 - 6878905-6879600,6880696-6880968 27 3.6
03_01_0534 + 3996479-3997458,3997938-3998265 27 4.7
07_01_1210 - 11538233-11538349,11538532-11538612,11538697-115387... 27 6.2
06_03_0677 - 23440273-23440749,23440824-23440985,23442007-23442627 27 6.2
05_01_0445 + 3547176-3547577,3548625-3549557,3550246-3550524,355... 27 6.2
03_06_0369 + 33425251-33425778,33425864-33426051,33426152-334262... 27 6.2
02_05_0243 - 27124559-27124864,27126922-27126990,27127741-271279... 27 6.2
10_01_0097 - 1171949-1172047,1172520-1172591,1172791-1172949,117... 26 8.2
04_04_0575 - 26342697-26342885,26343030-26343165,26343279-263437... 26 8.2
03_06_0763 + 36081546-36081669,36081755-36082170,36082280-360823... 26 8.2
03_02_0681 + 10358224-10359006,10359162-10359272,10360445-10360648 26 8.2
02_01_0768 + 5736778-5737341,5737451-5737612,5738678-5738707 26 8.2
01_06_0063 + 26100877-26101144,26101683-26101990,26102133-261028... 26 8.2
01_05_0099 - 18098169-18098390,18098878-18098972,18099063-180991... 26 8.2
>02_05_0538 + 29841801-29842280,29842559-29842930,29843013-29843309
Length = 382
Score = 49.2 bits (112), Expect = 1e-06
Identities = 24/32 (75%), Positives = 26/32 (81%)
Frame = +3
Query: 246 FAKDFLAGGISAAVSKTAVXPIERVKLLLQVQ 341
F DFL GG+SAAVSKTA PIERVKLL+Q Q
Sbjct: 82 FMIDFLMGGVSAAVSKTAAAPIERVKLLIQNQ 113
>05_03_0396 - 13477465-13477761,13477970-13478341,13478414-13478887
Length = 380
Score = 48.0 bits (109), Expect = 2e-06
Identities = 22/32 (68%), Positives = 26/32 (81%)
Frame = +3
Query: 246 FAKDFLAGGISAAVSKTAVXPIERVKLLLQVQ 341
F DF+ GG+SAAVSKTA PIER+KLL+Q Q
Sbjct: 80 FMIDFMMGGVSAAVSKTAAAPIERIKLLIQNQ 111
>01_06_0447 +
29452194-29452361,29453232-29453317,29453403-29453610,
29454252-29454381,29454561-29454745,29454858-29454989,
29455747-29455851
Length = 337
Score = 45.6 bits (103), Expect = 1e-05
Identities = 18/32 (56%), Positives = 27/32 (84%)
Frame = +3
Query: 246 FAKDFLAGGISAAVSKTAVXPIERVKLLLQVQ 341
FAK+ +AGG++ A SKTA+ P+ER+K+LLQ +
Sbjct: 27 FAKEMIAGGVAGAFSKTAIAPLERLKILLQTR 58
>05_07_0283 -
28937027-28937110,28937211-28937549,28937641-28937754,
28937843-28937955,28939050-28939087,28939315-28939478,
28939746-28939794,28940986-28941152
Length = 355
Score = 44.0 bits (99), Expect = 4e-05
Identities = 18/35 (51%), Positives = 27/35 (77%)
Frame = +3
Query: 240 VAFAKDFLAGGISAAVSKTAVXPIERVKLLLQVQH 344
++ K AGG++ VS+TAV P+ER+K+LLQVQ+
Sbjct: 41 LSICKSLFAGGVAGGVSRTAVAPLERMKILLQVQN 75
>07_03_0117 + 13589997-13590998
Length = 333
Score = 43.2 bits (97), Expect = 7e-05
Identities = 18/32 (56%), Positives = 26/32 (81%)
Frame = +3
Query: 243 AFAKDFLAGGISAAVSKTAVXPIERVKLLLQV 338
AFA++ +AGG++ V+KTAV P+ERV L+ QV
Sbjct: 40 AFAREMVAGGVAGVVAKTAVAPLERVNLMRQV 71
>01_05_0410 +
21914995-21915168,21915268-21915353,21915446-21915656,
21915869-21915998,21916740-21916924,21917014-21917145,
21917329-21917433
Length = 340
Score = 43.2 bits (97), Expect = 7e-05
Identities = 18/32 (56%), Positives = 26/32 (81%)
Frame = +3
Query: 246 FAKDFLAGGISAAVSKTAVXPIERVKLLLQVQ 341
+AK+ +AGG + A +KTAV P+ERVK+LLQ +
Sbjct: 29 YAKELIAGGAAGAFAKTAVAPLERVKILLQTR 60
>11_06_0633 + 25681756-25682061,25682961-25683329,25683419-25683733
Length = 329
Score = 41.5 bits (93), Expect = 2e-04
Identities = 20/33 (60%), Positives = 23/33 (69%)
Frame = +3
Query: 243 AFAKDFLAGGISAAVSKTAVXPIERVKLLLQVQ 341
A A DF GG +A V+KT P+ERVKLLLQ Q
Sbjct: 23 AAAADFAMGGAAAVVAKTGAAPVERVKLLLQNQ 55
>02_02_0134 +
7082462-7082627,7084199-7084325,7084404-7084611,
7084864-7084990,7085071-7085255,7085332-7085454,
7085777-7085836,7085980-7086117
Length = 377
Score = 39.5 bits (88), Expect = 8e-04
Identities = 17/35 (48%), Positives = 27/35 (77%)
Frame = +3
Query: 237 PVAFAKDFLAGGISAAVSKTAVXPIERVKLLLQVQ 341
P+A ++ +AGG++ V+KTAV P+ERVK+L Q +
Sbjct: 23 PLA-VRELVAGGVAGGVAKTAVAPLERVKILFQAR 56
>02_01_0763 -
5665010-5665202,5665285-5665375,5665460-5666245,
5667745-5668225
Length = 516
Score = 39.1 bits (87), Expect = 0.001
Identities = 15/31 (48%), Positives = 25/31 (80%)
Frame = +3
Query: 249 AKDFLAGGISAAVSKTAVXPIERVKLLLQVQ 341
+K +AGG+S A S+TA P++R+K+++QVQ
Sbjct: 234 SKYLIAGGVSGATSRTATAPLDRLKVIMQVQ 264
Score = 31.9 bits (69), Expect = 0.17
Identities = 16/41 (39%), Positives = 27/41 (65%)
Frame = +3
Query: 213 NKMSNLADPVAFAKDFLAGGISAAVSKTAVXPIERVKLLLQ 335
+K N +D + + +AGG++ AV++TA+ PI+ VK LQ
Sbjct: 318 SKGENKSD-IGTSGRLMAGGLAGAVAQTAIYPIDLVKTRLQ 357
>06_03_0691 +
23552437-23552914,23555168-23555953,23556045-23556135,
23556214-23556406
Length = 515
Score = 38.7 bits (86), Expect = 0.001
Identities = 16/38 (42%), Positives = 28/38 (73%)
Frame = +3
Query: 228 LADPVAFAKDFLAGGISAAVSKTAVXPIERVKLLLQVQ 341
++ V +K +AGGI+ A S+TA P++R+K+++QVQ
Sbjct: 226 ISKSVNASKYLIAGGIAGAASRTATAPLDRLKVIMQVQ 263
Score = 30.7 bits (66), Expect = 0.38
Identities = 12/25 (48%), Positives = 20/25 (80%)
Frame = +3
Query: 261 LAGGISAAVSKTAVXPIERVKLLLQ 335
+AGG++ AV++TA+ P++ VK LQ
Sbjct: 332 VAGGLAGAVAQTAIYPVDLVKTRLQ 356
>03_02_0489 +
8836306-8836500,8836906-8837082,8837175-8837321,
8837636-8837737,8837824-8837894,8837992-8838059,
8838595-8838836
Length = 333
Score = 37.5 bits (83), Expect = 0.003
Identities = 16/34 (47%), Positives = 23/34 (67%)
Frame = +3
Query: 261 LAGGISAAVSKTAVXPIERVKLLLQVQHVSKQIA 362
LAGG++ AVSKT P+ R+ +L QVQ + +A
Sbjct: 41 LAGGVAGAVSKTCTAPLARLTILFQVQGMHSDVA 74
>05_06_0233 +
26599068-26599466,26601214-26601829,26601871-26601917,
26602101-26602268
Length = 409
Score = 34.3 bits (75), Expect = 0.031
Identities = 16/32 (50%), Positives = 18/32 (56%)
Frame = +3
Query: 246 FAKDFLAGGISAAVSKTAVXPIERVKLLLQVQ 341
F +D +AG T V PIER KLLLQ Q
Sbjct: 48 FERDLVAGAAMGGAVHTVVAPIERAKLLLQTQ 79
>01_01_0282 -
2349336-2349583,2349719-2349786,2349880-2349950,
2350022-2350123,2350309-2350449,2350540-2350716,
2352228-2352338
Length = 305
Score = 33.9 bits (74), Expect = 0.041
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = +3
Query: 264 AGGISAAVSKTAVXPIERVKLLLQVQHVSKQIAA 365
AGG + AVSKT P+ R+ +L QV + +AA
Sbjct: 14 AGGFAGAVSKTCTAPLARLTILFQVAGMHSDVAA 47
>05_01_0505 + 4207841-4208455,4209982-4210143,4210247-4210717
Length = 415
Score = 32.7 bits (71), Expect = 0.095
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = +3
Query: 252 KDFLAGGISAAVSKTAVXPIERVKLLLQV 338
K ++GGI+ AVS+TAV P+E ++ L V
Sbjct: 136 KRLISGGIAGAVSRTAVAPLETIRTHLMV 164
>01_07_0083 +
40970890-40971015,40971886-40971994,40972679-40972790,
40972944-40973100,40973609-40973761,40974143-40974292,
40974803-40974999,40975446-40975473
Length = 343
Score = 31.9 bits (69), Expect = 0.17
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +3
Query: 255 DFLAGGISAAVSKTAVXPIERVKLLLQVQ 341
D LAG IS +S+T P++ +K+ QVQ
Sbjct: 16 DALAGAISGGISRTVTSPLDVIKIRFQVQ 44
>10_07_0101 - 12872296-12873288
Length = 330
Score = 29.1 bits (62), Expect = 1.2
Identities = 17/39 (43%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +3
Query: 228 LADPVAFAKDFLAGGISAAVSKTAV-XPIERVKLLLQVQ 341
+A+P A A AGG+SAAV+ V P++ V L VQ
Sbjct: 131 VAEPAASAAASAAGGVSAAVAAQVVWTPVDVVSQRLMVQ 169
>12_01_0019 -
135627-135983,136564-136797,137118-137196,137268-137383,
137847-137991,138177-138594,138644-138649,139315-139945
Length = 661
Score = 28.7 bits (61), Expect = 1.5
Identities = 12/33 (36%), Positives = 22/33 (66%)
Frame = +3
Query: 252 KDFLAGGISAAVSKTAVXPIERVKLLLQVQHVS 350
K LAGG+++A+S + + PI+ +K +Q +S
Sbjct: 377 KSALAGGLASALSTSVMHPIDSMKTRVQASSLS 409
>11_01_0021 -
143576-143932,144434-144667,144988-145066,145138-145253,
145717-145861,146048-146465,147206-147869
Length = 670
Score = 28.7 bits (61), Expect = 1.5
Identities = 12/33 (36%), Positives = 22/33 (66%)
Frame = +3
Query: 252 KDFLAGGISAAVSKTAVXPIERVKLLLQVQHVS 350
K LAGG+++A+S + + PI+ +K +Q +S
Sbjct: 386 KSALAGGLASALSTSVMHPIDSMKTRVQASSLS 418
>05_04_0010 -
17132810-17132935,17133017-17133169,17133202-17133263,
17133384-17133435,17133794-17133883,17134075-17134170,
17134258-17134311,17134575-17134665,17134996-17135072,
17135770-17135852,17136057-17136111
Length = 312
Score = 28.7 bits (61), Expect = 1.5
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +3
Query: 261 LAGGISAAVSKTAVXPIERVKLLLQVQHVSKQI 359
+AGG + V +TA+ PI+ +K LQ QI
Sbjct: 22 IAGGTAGVVVETALYPIDTIKTRLQAARGGSQI 54
>03_05_0791 +
27736978-27737217,27737648-27739191,27739512-27739763,
27739844-27739954,27740042-27740102,27740373-27740558
Length = 797
Score = 27.9 bits (59), Expect = 2.7
Identities = 14/46 (30%), Positives = 21/46 (45%)
Frame = +2
Query: 122 KNQELVFRDPPSACAATPTSTYSPSEDHIIEQNVEPRRSGRVR*GL 259
K + + F DP C T T +P DH+ +N P+ + GL
Sbjct: 604 KKEPIGFLDPTQICQTQHTVTLAPGSDHLKGKN--PKEIAEYKKGL 647
>05_04_0386 + 20822376-20822982,20823715-20824244,20824315-20825127
Length = 649
Score = 27.5 bits (58), Expect = 3.6
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = -2
Query: 127 IFEQEIWSNFVITGAQRVGVCLF*NSIDHV 38
+FEQ I SN ++T A GV NS+ H+
Sbjct: 20 LFEQVIGSNVIVTEAPLTGVTAEGNSVLHI 49
>01_01_0877 - 6878905-6879600,6880696-6880968
Length = 322
Score = 27.5 bits (58), Expect = 3.6
Identities = 12/40 (30%), Positives = 25/40 (62%)
Frame = +3
Query: 222 SNLADPVAFAKDFLAGGISAAVSKTAVXPIERVKLLLQVQ 341
S++++P ++ LAG + A+ + P+E VK+ LQ++
Sbjct: 110 SSMSEPPSYTSVALAGVGTGALQTLILSPVELVKIRLQLE 149
>03_01_0534 + 3996479-3997458,3997938-3998265
Length = 435
Score = 27.1 bits (57), Expect = 4.7
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +3
Query: 228 LADPVAFAKDFLAGGISAAVSKTAV-XPIERVKLLLQVQ 341
+++P A A AGG+SAA++ V P++ + L VQ
Sbjct: 126 VSEPAATAAASAAGGVSAAIAAQVVWTPVDVISQRLMVQ 164
>07_01_1210 -
11538233-11538349,11538532-11538612,11538697-11538758,
11539108-11539159,11539779-11539868,11539957-11540052,
11540127-11540180,11540314-11540404,11540731-11540807,
11541089-11541171,11541441-11541492
Length = 284
Score = 26.6 bits (56), Expect = 6.2
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +3
Query: 261 LAGGISAAVSKTAVXPIERVKLLLQ 335
+AGG + V +TA+ PI+ +K LQ
Sbjct: 21 IAGGAAGVVVETALYPIDTIKTRLQ 45
>06_03_0677 - 23440273-23440749,23440824-23440985,23442007-23442627
Length = 419
Score = 26.6 bits (56), Expect = 6.2
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = +3
Query: 261 LAGGISAAVSKTAVXPIERVKLLLQV 338
++G ++ AVS+T V P+E ++ L V
Sbjct: 141 VSGAVAGAVSRTCVAPLETIRTHLMV 166
>05_01_0445 +
3547176-3547577,3548625-3549557,3550246-3550524,
3550624-3550752,3550813-3550869
Length = 599
Score = 26.6 bits (56), Expect = 6.2
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +3
Query: 150 PHPRVPQLPPRHIHLVKI 203
PHPR P L PR +H +++
Sbjct: 23 PHPRRPGLRPRRLHRLRL 40
>03_06_0369 +
33425251-33425778,33425864-33426051,33426152-33426251,
33426366-33426578,33426616-33426822,33426908-33427095,
33427234-33427492
Length = 560
Score = 26.6 bits (56), Expect = 6.2
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = -2
Query: 334 WSSSLTRSMGXTAVLETAAEIPPARKSLANATGSARFDIL 215
WS ++ R + T+V AAE P A + + + RFD L
Sbjct: 40 WSRAVARRLLSTSVAAVAAETPRAEDAPSASGKEERFDWL 79
>02_05_0243 -
27124559-27124864,27126922-27126990,27127741-27127926,
27128572-27129093
Length = 360
Score = 26.6 bits (56), Expect = 6.2
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = +2
Query: 173 PTSTYSPSEDHIIEQNVEPRRSGRV 247
P S Y+ ++ ++ + +PRRSGRV
Sbjct: 248 PLSVYTHTDGELMAEFYQPRRSGRV 272
>10_01_0097 - 1171949-1172047,1172520-1172591,1172791-1172949,
1172998-1173381,1173478-1175253,1175329-1175452,
1176859-1177027,1177131-1177226,1177339-1177527,
1177965-1179303
Length = 1468
Score = 26.2 bits (55), Expect = 8.2
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +3
Query: 153 HPRVPQLPPRHIHLVKIT*SNKMSNLADPVAFAKDFL 263
HP++ + P RH + ++T S + L D A+ +D L
Sbjct: 1065 HPQIREFPSRHFYQGRLTDSESVVKLPDE-AYYRDAL 1100
>04_04_0575 -
26342697-26342885,26343030-26343165,26343279-26343795,
26344286-26344381,26344933-26345011,26345329-26345712
Length = 466
Score = 26.2 bits (55), Expect = 8.2
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = +3
Query: 240 VAFAKDFLAGGISAAVSKTAVXPIERVKLLLQVQHVSKQIAAD 368
V++++ LAG + AV P E +KL QV V A D
Sbjct: 194 VSYSEAMLAGIAAGAVESVLCTPFELLKLRSQVGSVKPMKATD 236
>03_06_0763 +
36081546-36081669,36081755-36082170,36082280-36082339,
36082466-36083101
Length = 411
Score = 26.2 bits (55), Expect = 8.2
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = +2
Query: 170 TPTSTYSPSEDHIIEQNVEPRRSGRVR 250
+P+S + ++ QN EPRRS R++
Sbjct: 368 SPSSLLQSGQSYLQNQNAEPRRSPRLQ 394
>03_02_0681 + 10358224-10359006,10359162-10359272,10360445-10360648
Length = 365
Score = 26.2 bits (55), Expect = 8.2
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +3
Query: 234 DPVAFAKDFLAGGISAAVSKTAVXPIERVKLLLQ 335
D + F + LAG ++ V TA+ P++ +K +Q
Sbjct: 37 DGLRFWQYMLAGSVAGVVEHTAMFPVDTLKTHMQ 70
>02_01_0768 + 5736778-5737341,5737451-5737612,5738678-5738707
Length = 251
Score = 26.2 bits (55), Expect = 8.2
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = +3
Query: 261 LAGGISAAVSKTAVXPIERVKLLLQV 338
++G I+ AVS+T V P+E ++ L V
Sbjct: 132 VSGAIAGAVSRTFVAPLETIRTHLMV 157
>01_06_0063 +
26100877-26101144,26101683-26101990,26102133-26102849,
26103338-26103466,26103594-26103698,26103732-26103797,
26104102-26104302,26104437-26104562
Length = 639
Score = 26.2 bits (55), Expect = 8.2
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = +2
Query: 152 PSACAATPTSTYSPSEDHIIEQNVEPRR 235
PS+C ++ T T+ +I ++ PRR
Sbjct: 264 PSSCISSATDTFPEIHHDVISASISPRR 291
>01_05_0099 -
18098169-18098390,18098878-18098972,18099063-18099131,
18099277-18099352,18101412-18101524,18104137-18104185,
18104540-18104572,18105446-18105552,18106892-18106990,
18107122-18107203
Length = 314
Score = 26.2 bits (55), Expect = 8.2
Identities = 10/35 (28%), Positives = 21/35 (60%)
Frame = +3
Query: 261 LAGGISAAVSKTAVXPIERVKLLLQVQHVSKQIAA 365
+AGG + +S T + P++ +K LQV + +++
Sbjct: 22 IAGGSAGVISATVLCPLDVIKTRLQVYGLPSNLSS 56
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,322,495
Number of Sequences: 37544
Number of extensions: 207803
Number of successful extensions: 689
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 646
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 689
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 588739508
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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