Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc29f15
         (343 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    23   0.66 
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    23   1.1  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    23   1.1  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    21   2.6  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    21   3.5  
AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nu...    21   4.6  
AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger tran...    20   6.1  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    20   8.1  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    20   8.1  
AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esteras...    20   8.1  
AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esteras...    20   8.1  
AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esteras...    20   8.1  
AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esteras...    20   8.1  

>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 23.4 bits (48), Expect = 0.66
 Identities = 11/33 (33%), Positives = 15/33 (45%), Gaps = 1/33 (3%)
 Frame = +1

Query: 94  CGRAGS-GRLFGGARSRGCTVHFNVSVYEYGVC 189
           C   G+   LFG     GC + FN  V+ +  C
Sbjct: 243 CDMCGAINMLFGFPIIIGCLIQFNTIVFSFCYC 275



 Score = 23.4 bits (48), Expect = 0.66
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = +1

Query: 115 RLFGGARSRGCTVHFNVSVYEYGVC 189
           R+FG     GC + FN  V+ +  C
Sbjct: 532 RIFGFIIIIGCLIQFNTIVFAFCYC 556


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 22.6 bits (46), Expect = 1.1
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = -3

Query: 212 IKGQLSPTHTPYSYTLTLKCTVH 144
           I GQL P + P   TLT    V+
Sbjct: 174 IPGQLEPANVPQMITLTFNGAVN 196


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 22.6 bits (46), Expect = 1.1
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = -3

Query: 212 IKGQLSPTHTPYSYTLTLKCTVH 144
           I GQL P + P   TLT    V+
Sbjct: 181 IPGQLEPANVPQMITLTFNGAVN 203


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 21.4 bits (43), Expect = 2.6
 Identities = 8/19 (42%), Positives = 9/19 (47%)
 Frame = -2

Query: 255 Y*TPTPLYRVWQTLYKGTT 199
           Y  P P Y  W T+   TT
Sbjct: 297 YSAPGPTYSTWSTVQTPTT 315


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 21.0 bits (42), Expect = 3.5
 Identities = 8/15 (53%), Positives = 8/15 (53%)
 Frame = +1

Query: 91  GCGRAGSGRLFGGAR 135
           GC RA S    GG R
Sbjct: 56  GCARASSATTMGGPR 70


>AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle
           nuclear receptor protein.
          Length = 407

 Score = 20.6 bits (41), Expect = 4.6
 Identities = 9/26 (34%), Positives = 12/26 (46%)
 Frame = +1

Query: 94  CGRAGSGRLFGGARSRGCTVHFNVSV 171
           CG   SG+ +G     GC   F  +V
Sbjct: 89  CGDRASGKHYGVYSCEGCKGFFKRTV 114


>AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger
           transcription factor protein.
          Length = 228

 Score = 20.2 bits (40), Expect = 6.1
 Identities = 8/22 (36%), Positives = 9/22 (40%)
 Frame = +1

Query: 94  CGRAGSGRLFGGARSRGCTVHF 159
           CG   +G  FG     GC   F
Sbjct: 8   CGEPAAGFHFGAFTCEGCKSFF 29


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 19.8 bits (39), Expect = 8.1
 Identities = 6/8 (75%), Positives = 7/8 (87%)
 Frame = -2

Query: 234 YRVWQTLY 211
           YR WQT+Y
Sbjct: 525 YRPWQTVY 532


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 19.8 bits (39), Expect = 8.1
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = -3

Query: 278 NLDKILFYIRHRPPFTGS 225
           NLD +  ++  RP FT +
Sbjct: 282 NLDVMKSFVNFRPSFTAA 299


>AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 19.8 bits (39), Expect = 8.1
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = +1

Query: 109 SGRLFGGARSRGCTVHFNVSVYE 177
           SGR FG A +      FN+ +++
Sbjct: 436 SGRNFGAAHADDVPYIFNMGLFD 458


>AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 19.8 bits (39), Expect = 8.1
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = +1

Query: 109 SGRLFGGARSRGCTVHFNVSVYE 177
           SGR FG A +      FN+ +++
Sbjct: 436 SGRNFGAAHADDVPYIFNMGLFD 458


>AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 19.8 bits (39), Expect = 8.1
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = +1

Query: 109 SGRLFGGARSRGCTVHFNVSVYE 177
           SGR FG A +      FN+ +++
Sbjct: 436 SGRNFGAAHADDVPYIFNMGLFD 458


>AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 19.8 bits (39), Expect = 8.1
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = +1

Query: 109 SGRLFGGARSRGCTVHFNVSVYE 177
           SGR FG A +      FN+ +++
Sbjct: 436 SGRNFGAAHADDVPYIFNMGLFD 458


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,955
Number of Sequences: 336
Number of extensions: 1781
Number of successful extensions: 17
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  6664455
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)