Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc29f15
         (343 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ001042-1|CAA04496.1|  395|Anopheles gambiae putative gram nega...    26   0.34 
AF081533-1|AAD29854.1|  395|Anopheles gambiae putative gram nega...    26   0.34 
AY341191-1|AAR13755.1|  191|Anopheles gambiae GNBP B1 protein.         25   0.78 
AY341190-1|AAR13754.1|  191|Anopheles gambiae GNBP B1 protein.         25   0.78 
AY341189-1|AAR13753.1|  191|Anopheles gambiae GNBP B1 protein.         25   0.78 
AY341188-1|AAR13752.1|  191|Anopheles gambiae GNBP B1 protein.         25   0.78 
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    23   3.1  
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    23   4.1  
AJ441131-2|CAD29631.1|  208|Anopheles gambiae hypothetical prote...    22   5.5  
AJ439398-1|CAD28124.1|  208|Anopheles gambiae hypothetical prote...    22   5.5  

>AJ001042-1|CAA04496.1|  395|Anopheles gambiae putative gram
           negative bacteria bindingprotein protein.
          Length = 395

 Score = 26.2 bits (55), Expect = 0.34
 Identities = 12/36 (33%), Positives = 14/36 (38%)
 Frame = +3

Query: 105 WEW*AFWRRPKSWVYGTFXXXXXXXXXXXXGKLSLY 212
           W W A W  PK   YGT+            G  +LY
Sbjct: 189 WLWPAIWLLPKRNAYGTWPASGEMDLMESRGNENLY 224


>AF081533-1|AAD29854.1|  395|Anopheles gambiae putative gram
           negative bacteria bindingprotein protein.
          Length = 395

 Score = 26.2 bits (55), Expect = 0.34
 Identities = 12/36 (33%), Positives = 14/36 (38%)
 Frame = +3

Query: 105 WEW*AFWRRPKSWVYGTFXXXXXXXXXXXXGKLSLY 212
           W W A W  PK   YGT+            G  +LY
Sbjct: 189 WLWPAIWLLPKRNAYGTWPASGEMDLMESRGNENLY 224


>AY341191-1|AAR13755.1|  191|Anopheles gambiae GNBP B1 protein.
          Length = 191

 Score = 25.0 bits (52), Expect = 0.78
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = +3

Query: 105 WEW*AFWRRPKSWVYGTF 158
           W W A W  PK   YGT+
Sbjct: 171 WLWPAIWLLPKRNAYGTW 188


>AY341190-1|AAR13754.1|  191|Anopheles gambiae GNBP B1 protein.
          Length = 191

 Score = 25.0 bits (52), Expect = 0.78
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = +3

Query: 105 WEW*AFWRRPKSWVYGTF 158
           W W A W  PK   YGT+
Sbjct: 171 WLWPAIWLLPKRNAYGTW 188


>AY341189-1|AAR13753.1|  191|Anopheles gambiae GNBP B1 protein.
          Length = 191

 Score = 25.0 bits (52), Expect = 0.78
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = +3

Query: 105 WEW*AFWRRPKSWVYGTF 158
           W W A W  PK   YGT+
Sbjct: 171 WLWPAIWLLPKRNAYGTW 188


>AY341188-1|AAR13752.1|  191|Anopheles gambiae GNBP B1 protein.
          Length = 191

 Score = 25.0 bits (52), Expect = 0.78
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = +3

Query: 105 WEW*AFWRRPKSWVYGTF 158
           W W A W  PK   YGT+
Sbjct: 171 WLWPAIWLLPKRNAYGTW 188


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
           precursor protein.
          Length = 1623

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = -3

Query: 260 FYIRHRPPFTGSGKHCI 210
           F+ RH    TG G HCI
Sbjct: 352 FFDRHLYNLTGHGGHCI 368


>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 8/28 (28%), Positives = 17/28 (60%)
 Frame = -1

Query: 88  SGAGCGKDVY*KTRHQKKITRQHGHFTW 5
           SG+G  K+ Y + +H+ ++  +   FT+
Sbjct: 169 SGSGLLKEDYNRLKHEMQMAEEETQFTY 196


>AJ441131-2|CAD29631.1|  208|Anopheles gambiae hypothetical protein
           protein.
          Length = 208

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 7/22 (31%), Positives = 13/22 (59%)
 Frame = -2

Query: 225 WQTLYKGTTFPDTYTVLIHTHI 160
           W+  Y+G++   T T   H+H+
Sbjct: 84  WRLDYRGSSITTTTTSTCHSHL 105


>AJ439398-1|CAD28124.1|  208|Anopheles gambiae hypothetical protein
           protein.
          Length = 208

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 7/22 (31%), Positives = 13/22 (59%)
 Frame = -2

Query: 225 WQTLYKGTTFPDTYTVLIHTHI 160
           W+  Y+G++   T T   H+H+
Sbjct: 84  WRLDYRGSSITTTTTSTCHSHL 105


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 367,291
Number of Sequences: 2352
Number of extensions: 7391
Number of successful extensions: 20
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 57
effective length of database: 429,915
effective search space used: 24075240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)