Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc29f15
         (343 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    25   0.25 
AB238796-1|BAE93398.1|  128|Apis mellifera Queen brain-selective...    25   0.33 
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          21   3.1  
Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    21   5.4  
AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    21   5.4  
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    21   5.4  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    20   7.2  
AY588474-1|AAT94401.1|  104|Apis mellifera defensin 2 protein.         20   9.5  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    20   9.5  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    20   9.5  

>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 25.0 bits (52), Expect = 0.25
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -1

Query: 103 PYHNRSGAGCGKDVY 59
           P H + GA CG +VY
Sbjct: 64  PVHEKGGASCGPNVY 78



 Score = 20.2 bits (40), Expect = 7.2
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = -2

Query: 264 FILY*TPTPLYRVWQTLYKGTTFPDTYTVLI 172
           F+L  TPT +  + Q    G +F   Y  L+
Sbjct: 659 FLLLATPTTVTCILQRFGVGVSFSAVYGALL 689


>AB238796-1|BAE93398.1|  128|Apis mellifera Queen brain-selective
           protein-1 protein.
          Length = 128

 Score = 24.6 bits (51), Expect = 0.33
 Identities = 9/25 (36%), Positives = 15/25 (60%), Gaps = 2/25 (8%)
 Frame = +1

Query: 175 EYGVCVGESCPFIQCL--PDPVKGG 243
           +YG+ +  +C  +QC   PD + GG
Sbjct: 47  KYGIAMSSACGIVQCAKGPDELCGG 71


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 21.4 bits (43), Expect = 3.1
 Identities = 6/19 (31%), Positives = 13/19 (68%)
 Frame = -1

Query: 157 NVPYTHDFGRLQKAYHSQP 101
           N+PY+  +GR ++  + +P
Sbjct: 599 NLPYSSLYGRFKRGKYEEP 617


>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 20.6 bits (41), Expect = 5.4
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -3

Query: 320 IINLIYVKLYKYIHNLDKILF 258
           I+NL  + L +YIH  D + +
Sbjct: 113 ILNLCAISLDRYIHIKDPLRY 133


>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 20.6 bits (41), Expect = 5.4
 Identities = 9/26 (34%), Positives = 12/26 (46%)
 Frame = +1

Query: 94  CGRAGSGRLFGGARSRGCTVHFNVSV 171
           CG   SG+ +G     GC   F  +V
Sbjct: 113 CGDRASGKHYGVYSCEGCKGFFKRTV 138


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 20.6 bits (41), Expect = 5.4
 Identities = 9/26 (34%), Positives = 12/26 (46%)
 Frame = +1

Query: 94  CGRAGSGRLFGGARSRGCTVHFNVSV 171
           CG   SG+ +G     GC   F  +V
Sbjct: 113 CGDRASGKHYGVYSCEGCKGFFKRTV 138


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 20.2 bits (40), Expect = 7.2
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = -2

Query: 264 FILY*TPTPLYRVWQTLYKGTTFPDTYTVLI 172
           F+L  TPT +  + Q    G +F   Y  L+
Sbjct: 569 FLLLATPTTVTCILQRFGVGVSFSAVYGALL 599


>AY588474-1|AAT94401.1|  104|Apis mellifera defensin 2 protein.
          Length = 104

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = +1

Query: 190 VGESCPFIQCLPDPVKGGRC 249
           +  S   I+CL    KGG C
Sbjct: 76  INHSACAIRCLAQRRKGGSC 95


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 6/18 (33%), Positives = 9/18 (50%)
 Frame = +1

Query: 85  HCGCGRAGSGRLFGGARS 138
           +C CG     R+ GG  +
Sbjct: 150 NCNCGWKNPSRIVGGTNT 167


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 9/28 (32%), Positives = 12/28 (42%)
 Frame = +1

Query: 94  CGRAGSGRLFGGARSRGCTVHFNVSVYE 177
           CG   SG  +G     GC   F  S+ +
Sbjct: 70  CGDKASGFHYGVHSCEGCKGFFRRSIQQ 97


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,099
Number of Sequences: 438
Number of extensions: 1760
Number of successful extensions: 11
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  7839909
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)