Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc29f06
(609 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P18935 Cluster: Cytochrome b; n=3382; root|Rep: Cytochr... 201 1e-50
UniRef50_Q76F81 Cluster: Cytochrome b protein; n=12; Coelomata|R... 194 1e-48
UniRef50_A5D6K1 Cluster: Apocytochrome b; n=10; Arthropoda|Rep: ... 191 1e-47
UniRef50_O78784 Cluster: Cytochrome b; n=653; Coelomata|Rep: Cyt... 190 3e-47
UniRef50_Q959C6 Cluster: Cytochrome b; n=28; Coelomata|Rep: Cyto... 188 1e-46
UniRef50_Q8WCJ7 Cluster: Cytochrome b; n=2933; root|Rep: Cytochr... 187 2e-46
UniRef50_P00156 Cluster: Cytochrome b; n=22548; root|Rep: Cytoch... 181 1e-44
UniRef50_Q950S3 Cluster: Cytochrome b; n=144; Eukaryota|Rep: Cyt... 163 3e-39
UniRef50_P42792 Cluster: Cytochrome b; n=6041; root|Rep: Cytochr... 158 1e-37
UniRef50_Q2I6Z5 Cluster: Cytochrome b; n=41; Fungi/Metazoa group... 156 4e-37
UniRef50_P23134 Cluster: Cytochrome b; n=8595; root|Rep: Cytochr... 153 2e-36
UniRef50_A6YHJ9 Cluster: Apocytochrome b; n=2; Hexasterophora|Re... 152 5e-36
UniRef50_Q8WF54 Cluster: Cytochrome b; n=23; Eukaryota|Rep: Cyto... 151 1e-35
UniRef50_Q00228 Cluster: Cytochrome b; n=19; Mytilus|Rep: Cytoch... 150 2e-35
UniRef50_Q9B305 Cluster: Cytochrome b; n=19; Eukaryota|Rep: Cyto... 149 7e-35
UniRef50_Q8M370 Cluster: Cytochrome b; n=46; Neoptera|Rep: Cytoc... 147 2e-34
UniRef50_Q0Z877 Cluster: Cytochrome b; n=7; Mermithidae|Rep: Cyt... 144 1e-33
UniRef50_P51131 Cluster: Cytochrome b/c1 [Contains: Cytochrome b... 139 4e-32
UniRef50_O48101 Cluster: Cytochrome b; n=110; Serpentes|Rep: Cyt... 131 1e-29
UniRef50_Q8LYW3 Cluster: Apocytochrome b; n=2; Polytomella|Rep: ... 130 3e-29
UniRef50_Q5DNB7 Cluster: Cytochrome b; n=1; Leptorhynchoides the... 128 1e-28
UniRef50_Q2HJL4 Cluster: Cytochrome b; n=1; Campanulotes bidenta... 124 1e-27
UniRef50_Q6JCT1 Cluster: Cytochrome b; n=6; Neoptera|Rep: Cytoch... 122 7e-27
UniRef50_Q06SB2 Cluster: Cytochrome b; n=1; Hiatella arctica|Rep... 122 7e-27
UniRef50_Q94NM9 Cluster: Cytochrome b; n=4; Cricetidae|Rep: Cyto... 120 2e-26
UniRef50_P05418 Cluster: Cytochrome b; n=11; Alphaproteobacteria... 118 8e-26
UniRef50_Q02761 Cluster: Cytochrome b; n=15; Rhodobacterales|Rep... 118 1e-25
UniRef50_Q9B8A8 Cluster: Apocytochrome b; n=1; Trichinella spira... 117 2e-25
UniRef50_Q4FE09 Cluster: Cytochrome b apoenzyme; n=4; Pectinidae... 117 2e-25
UniRef50_Q5W910 Cluster: Cytochrome b; n=1; Lingula anatina|Rep:... 117 3e-25
UniRef50_Q952Z5 Cluster: Cytochrome b; n=1; Partula turgida|Rep:... 116 6e-25
UniRef50_Q4KRX9 Cluster: Cytochrome b; n=3; Crassostrea|Rep: Cyt... 111 9e-24
UniRef50_Q1HTY3 Cluster: Cytochrome oxidase B; n=11; Stolidobran... 108 9e-23
UniRef50_Q5FTF2 Cluster: Ubiquinol-cytochrome c reductase cytoch... 106 4e-22
UniRef50_Q6TY86 Cluster: Cytochrome b; n=1; Xiphinema americanum... 106 4e-22
UniRef50_P24890 Cluster: Cytochrome b; n=210; Chromadorea|Rep: C... 105 6e-22
UniRef50_O31215 Cluster: Cytochrome b; n=132; cellular organisms... 103 3e-21
UniRef50_Q8M4X4 Cluster: Cytochrome b; n=76; Dinophyceae|Rep: Cy... 101 2e-20
UniRef50_Q94R91 Cluster: Cytochrome b; n=1; Sycoscapter sp. 402|... 100 2e-20
UniRef50_Q8HN51 Cluster: Cytochrome b; n=4; Chromadorea|Rep: Cyt... 100 3e-20
UniRef50_Q5NNX9 Cluster: Cytochrome b subunit; n=1; Zymomonas mo... 99 7e-20
UniRef50_Q9B8V1 Cluster: Cytochrome b; n=66; Platyhelminthes|Rep... 96 7e-19
UniRef50_Q02768 Cluster: Cytochrome b; n=889; Apicomplexa|Rep: C... 96 7e-19
UniRef50_A1W459 Cluster: Cytochrome b/b6, N-terminal domain; n=6... 94 3e-18
UniRef50_A1C1A8 Cluster: Apocytochrome b; n=88; Magnoliophyta|Re... 93 5e-18
UniRef50_O47901 Cluster: Cytochrome b; n=17; Euteleostomi|Rep: C... 88 1e-16
UniRef50_Q8SHP6 Cluster: Apocytochrome B; n=1; Hypocrea jecorina... 88 2e-16
UniRef50_P03879 Cluster: Intron-encoded RNA maturase bI4 precurs... 88 2e-16
UniRef50_Q9PEW9 Cluster: Ubiquinol cytochrome C oxidoreductase, ... 87 2e-16
UniRef50_A0EXD5 Cluster: Cytochrome b; n=21; Otophysi|Rep: Cytoc... 83 5e-15
UniRef50_Q9TAE6 Cluster: Cytochrome b; n=1; Anniella geronimensi... 81 2e-14
UniRef50_Q74CM4 Cluster: Cytochrome b/b6; n=4; Geobacter|Rep: Cy... 81 2e-14
UniRef50_A6Q5D2 Cluster: Ubiquinol cytochrome c oxidoreductase, ... 80 4e-14
UniRef50_Q8M833 Cluster: Cytochrome b; n=1; Microstomum lineare|... 80 5e-14
UniRef50_A3QRH7 Cluster: Cytochrome b; n=1; Microcotyle sebastis... 79 8e-14
UniRef50_Q9KIW3 Cluster: Putative cytochrome b precursor; n=7; A... 79 1e-13
UniRef50_O66459 Cluster: Cytochrome b; n=2; Aquifex aeolicus|Rep... 78 1e-13
UniRef50_Q5DKX9 Cluster: Cytochrome b; n=8; Pseudococcidae|Rep: ... 75 1e-12
UniRef50_UPI00015C5733 Cluster: hypothetical protein CKO_01262; ... 74 2e-12
UniRef50_Q36099 Cluster: Cytochrome b; n=12; Piroplasmida|Rep: C... 73 4e-12
UniRef50_O21345 Cluster: Apocytochrome b; n=1; Euhadra herklotsi... 72 9e-12
UniRef50_A7QK39 Cluster: Chromosome chr16 scaffold_110, whole ge... 71 3e-11
UniRef50_A1BQ48 Cluster: Cytochrome b; n=105; Clupeocephala|Rep:... 66 8e-10
UniRef50_Q1HTY1 Cluster: Cytochrome oxidase B; n=2; Pyuridae|Rep... 65 1e-09
UniRef50_Q76CU5 Cluster: Cytochrome b; n=1; Galaxea fascicularis... 62 1e-08
UniRef50_A4Z9W1 Cluster: Cytochrome b; n=9; Colubroidea|Rep: Cyt... 57 4e-07
UniRef50_P03880 Cluster: Intron-encoded DNA endonuclease I-AniI ... 56 9e-07
UniRef50_Q9ZZW7 Cluster: Cytochrome b mRNA maturase bI3; n=1; Sa... 49 1e-04
UniRef50_P81376 Cluster: Cytochrome b; n=1; Plasmodium gallinace... 48 2e-04
UniRef50_A7H6W4 Cluster: Cytochrome b/b6 domain; n=2; Anaeromyxo... 47 3e-04
UniRef50_Q4XXN6 Cluster: Putative uncharacterized protein; n=1; ... 47 3e-04
UniRef50_Q9L597 Cluster: Subunit IV; n=2; Heliobacteriaceae|Rep:... 47 4e-04
UniRef50_P56773 Cluster: Cytochrome b6; n=298; cellular organism... 47 4e-04
UniRef50_Q1EN74 Cluster: Cytochrome b; n=2; Heligmosomoides poly... 46 0.001
UniRef50_Q4AEZ5 Cluster: Cytochrome b/b6, N-terminal; n=1; Chlor... 45 0.002
UniRef50_P56774 Cluster: Cytochrome b6-f complex subunit 4; n=24... 45 0.002
UniRef50_Q9GM37 Cluster: Putative uncharacterized protein; n=1; ... 44 0.003
UniRef50_Q18UP2 Cluster: Putative uncharacterized protein; n=2; ... 43 0.005
UniRef50_Q3LHR7 Cluster: Cytochrome b; n=1; Trichosporon domesti... 43 0.007
UniRef50_Q7M2D6 Cluster: Ubiquinol-cytochrome-c reductase (EC 1.... 42 0.009
UniRef50_Q3YFJ1 Cluster: Cytochrome b; n=27; Coelomata|Rep: Cyto... 40 0.035
UniRef50_A3ZQU1 Cluster: Menaquinol-cytochrome-c reductase cytoc... 40 0.035
UniRef50_Q67JM0 Cluster: Menaquinol-cytochrome C reductase; n=1;... 40 0.046
UniRef50_A3ER63 Cluster: Cytochrome b subunit of the bc complex;... 40 0.046
UniRef50_Q33568 Cluster: Cytochrome b; n=33; Kinetoplastida|Rep:... 40 0.046
UniRef50_Q8HE84 Cluster: Cytochrome b; n=1; Lyristes plebejus|Re... 39 0.11
UniRef50_Q9HRR2 Cluster: Cytochrome b6; n=4; Halobacteriaceae|Re... 38 0.25
UniRef50_A4A2J7 Cluster: Apocytochrome b6; n=1; Blastopirellula ... 37 0.33
UniRef50_Q0LKT7 Cluster: Cytochrome b/b6-like; n=1; Herpetosipho... 37 0.43
UniRef50_Q01PC6 Cluster: Cytochrome b/b6, N-terminal domain; n=1... 36 0.57
UniRef50_A6CCS1 Cluster: Cytochrome b6; n=1; Planctomyces maris ... 36 0.57
UniRef50_Q7YIG0 Cluster: Cytochrome b; n=2; Otiorhynchus scaber|... 36 0.57
UniRef50_Q18UP1 Cluster: Cytochrome b/b6-like; n=2; Desulfitobac... 36 0.75
UniRef50_A0LFE3 Cluster: Cytochrome b/b6, N-terminal domain; n=1... 36 0.99
UniRef50_Q70LX1 Cluster: Cytochrome b; n=1; Hoplobatrachus rugul... 34 2.3
UniRef50_Q1ARW1 Cluster: Cytochrome b/b6-like protein; n=2; Rubr... 34 2.3
UniRef50_A6GGF8 Cluster: Cytochrome b/b6-like protein; n=1; Ples... 34 2.3
UniRef50_UPI0000F2E488 Cluster: PREDICTED: similar to submaxilla... 34 3.0
UniRef50_Q9ZGG0 Cluster: Cytochrome b6; n=3; Heliobacteriaceae|R... 34 3.0
UniRef50_Q021B1 Cluster: Cytochrome b/b6, N-terminal domain; n=4... 33 4.0
UniRef50_Q01YB7 Cluster: Cytochrome b/b6, N-terminal domain; n=6... 33 4.0
UniRef50_Q01T86 Cluster: Cytochrome b/b6, N-terminal domain; n=1... 33 4.0
UniRef50_Q7NJG2 Cluster: Cytochrome b6; n=1; Gloeobacter violace... 32 9.3
UniRef50_A6C5Y3 Cluster: Cytochrome b/b6-like protein; n=1; Plan... 32 9.3
>UniRef50_P18935 Cluster: Cytochrome b; n=3382; root|Rep: Cytochrome
b - Drosophila melanogaster (Fruit fly)
Length = 378
Score = 201 bits (490), Expect = 1e-50
Identities = 103/161 (63%), Positives = 110/161 (68%)
Frame = -2
Query: 551 YVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXX 372
YVLP GQ+SFW ATVITNLL AIPYLG LV + GGFAVDNATLTRF+T
Sbjct: 132 YVLPWGQMSFWVATVITNLLYAIPYLGMDLVQWLWGGFAVDNATLTRFFTFHFILPFIVL 191
Query: 371 XXXXXXXXXXHQTGSNNPLGLNRNLDKIPFHPFFTFKDXXXXXXXXXXXXXXXXINPYLL 192
HQTGSNNP+GLN N+DKIPFHP+FTFKD I+P LL
Sbjct: 192 AMTMIHLLFLHQTGSNNPIGLNSNIDKIPFHPYFTFKDIVGFIVMIFILISLVLISPNLL 251
Query: 191 GDPDNFTPANPLVTPVHIQPE*YFLXAYAILRSIPNKLGGV 69
GDPDNF PA PLVTP HIQPE YFL AYAILRSIPNKLGGV
Sbjct: 252 GDPDNFIPATPLVTPAHIQPEWYFLFAYAILRSIPNKLGGV 292
>UniRef50_Q76F81 Cluster: Cytochrome b protein; n=12; Coelomata|Rep:
Cytochrome b protein - Ornithodoros porcinus
Length = 365
Score = 194 bits (473), Expect = 1e-48
Identities = 97/183 (53%), Positives = 114/183 (62%)
Frame = -2
Query: 551 YVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXX 372
YVLP GQ+SFWGATVITNLLSAIPY+GT + I GGF+VDN TLTRF+T
Sbjct: 128 YVLPWGQMSFWGATVITNLLSAIPYIGTSITQWIWGGFSVDNPTLTRFFTLHFMLPFILT 187
Query: 371 XXXXXXXXXXHQTGSNNPLGLNRNLDKIPFHPFFTFKDXXXXXXXXXXXXXXXXINPYLL 192
H+TGS+NPLG++ N+DKIPFHP++T KD PY+
Sbjct: 188 VLIIIHIFSLHETGSSNPLGISNNIDKIPFHPYYTLKDIMGFLIMLLILFTIIMNYPYMF 247
Query: 191 GDPDNFTPANPLVTPVHIQPE*YFLXAYAILRSIPNKLGGVXXXXXXXXXXXXLPFTLKK 12
DP+NF ANPL+TP HIQPE YFL AYAILRSIPNKLGGV LP T+K
Sbjct: 248 SDPENFLEANPLITPPHIQPEWYFLFAYAILRSIPNKLGGVTALIMSIMILTLLPLTMKP 307
Query: 11 KIQ 3
K +
Sbjct: 308 KFK 310
>UniRef50_A5D6K1 Cluster: Apocytochrome b; n=10; Arthropoda|Rep:
Apocytochrome b - Bothropolys sp. SP-2004
Length = 378
Score = 191 bits (465), Expect = 1e-47
Identities = 97/182 (53%), Positives = 118/182 (64%)
Frame = -2
Query: 551 YVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXX 372
YVLP GQ+SFWGATVITNL+SA+PY+GT++V + GGFAVDNATLTRF++
Sbjct: 133 YVLPWGQMSFWGATVITNLVSAVPYMGTMIVQWLWGGFAVDNATLTRFFSFHFILPFIIA 192
Query: 371 XXXXXXXXXXHQTGSNNPLGLNRNLDKIPFHPFFTFKDXXXXXXXXXXXXXXXXINPYLL 192
HQTGSNNP G+++NLDK+ FHPFF+ KD + PY L
Sbjct: 193 AMVILHLLFLHQTGSNNPAGMSKNLDKVSFHPFFSVKDSMGFIMLISFYMFISLMLPYDL 252
Query: 191 GDPDNFTPANPLVTPVHIQPE*YFLXAYAILRSIPNKLGGVXXXXXXXXXXXXLPFTLKK 12
GD +NF ANPLVTP+HI+PE YFL AYAILRSIPNKLGGV L F++K+
Sbjct: 253 GDSENFIFANPLVTPIHIKPEWYFLFAYAILRSIPNKLGGVIALIMSILILLTLSFSVKR 312
Query: 11 KI 6
I
Sbjct: 313 NI 314
>UniRef50_O78784 Cluster: Cytochrome b; n=653; Coelomata|Rep:
Cytochrome b - Capra sibirica (Siberian ibex)
Length = 380
Score = 190 bits (462), Expect = 3e-47
Identities = 96/161 (59%), Positives = 106/161 (65%)
Frame = -2
Query: 551 YVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXX 372
YVLP GQ+SFWGATVITNLLSAIPY+GT LV I GGF+VD ATLTRF+
Sbjct: 131 YVLPWGQMSFWGATVITNLLSAIPYIGTSLVEWIWGGFSVDKATLTRFFAFHFILPFIIM 190
Query: 371 XXXXXXXXXXHQTGSNNPLGLNRNLDKIPFHPFFTFKDXXXXXXXXXXXXXXXXINPYLL 192
H+TGSNNP G+ N DKIPFHP++T KD P LL
Sbjct: 191 ALAMVHLLFLHETGSNNPTGIPSNTDKIPFHPYYTIKDILGATLLILALMLLVLFMPDLL 250
Query: 191 GDPDNFTPANPLVTPVHIQPE*YFLXAYAILRSIPNKLGGV 69
GDPDN+TPANPL TP HI+PE YFL AYAILRSIPNKLGGV
Sbjct: 251 GDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGV 291
>UniRef50_Q959C6 Cluster: Cytochrome b; n=28; Coelomata|Rep:
Cytochrome b - Galaxias sp. 'teviot'
Length = 386
Score = 188 bits (457), Expect = 1e-46
Identities = 94/161 (58%), Positives = 107/161 (66%)
Frame = -2
Query: 551 YVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXX 372
YVLP GQ+SFWGATVITNLLSA+PY+G LV I GGF+VDNATLTRF+
Sbjct: 132 YVLPWGQMSFWGATVITNLLSAVPYVGNDLVQWIWGGFSVDNATLTRFFAFHFLFPFVIA 191
Query: 371 XXXXXXXXXXHQTGSNNPLGLNRNLDKIPFHPFFTFKDXXXXXXXXXXXXXXXXINPYLL 192
H+TGSNNP GLN + DKI FHP+F++KD +P +L
Sbjct: 192 GATVLHLLFLHETGSNNPAGLNSDADKISFHPYFSYKDLLGFVALLLALTSLALFSPNML 251
Query: 191 GDPDNFTPANPLVTPVHIQPE*YFLXAYAILRSIPNKLGGV 69
GD +NF PANPLVTP HIQPE YFL AYAILRSIPNKLGGV
Sbjct: 252 GDSENFIPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGV 292
>UniRef50_Q8WCJ7 Cluster: Cytochrome b; n=2933; root|Rep: Cytochrome
b - Cryptotis parva (Least shrew)
Length = 379
Score = 187 bits (456), Expect = 2e-46
Identities = 95/161 (59%), Positives = 107/161 (66%)
Frame = -2
Query: 551 YVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXX 372
YVLP GQ+SFWGATVITNLLSAIPY+G+ LV I GGF+VD ATLTRF+
Sbjct: 131 YVLPWGQMSFWGATVITNLLSAIPYIGSDLVQWIWGGFSVDKATLTRFFAFHFILPFVIA 190
Query: 371 XXXXXXXXXXHQTGSNNPLGLNRNLDKIPFHPFFTFKDXXXXXXXXXXXXXXXXINPYLL 192
H+TGSNNP GL + DKIPFHP++T KD +P LL
Sbjct: 191 ALAGVHLLFLHETGSNNPSGLPSDADKIPFHPYYTIKDILGILLLILVLTCLVLFSPDLL 250
Query: 191 GDPDNFTPANPLVTPVHIQPE*YFLXAYAILRSIPNKLGGV 69
GDPDN+TPANPL TP HI+PE YFL AYAILRSIPNKLGGV
Sbjct: 251 GDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGV 291
>UniRef50_P00156 Cluster: Cytochrome b; n=22548; root|Rep:
Cytochrome b - Homo sapiens (Human)
Length = 380
Score = 181 bits (440), Expect = 1e-44
Identities = 91/161 (56%), Positives = 106/161 (65%)
Frame = -2
Query: 551 YVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXX 372
YVLP GQ+SFWGATVITNLLSAIPY+GT LV I GG++VD+ TLTRF+T
Sbjct: 131 YVLPWGQMSFWGATVITNLLSAIPYIGTDLVQWIWGGYSVDSPTLTRFFTFHFILPFIIA 190
Query: 371 XXXXXXXXXXHQTGSNNPLGLNRNLDKIPFHPFFTFKDXXXXXXXXXXXXXXXXINPYLL 192
H+TGSNNPLG+ + DKI FHP++T KD +P LL
Sbjct: 191 ALATLHLLFLHETGSNNPLGITSHSDKITFHPYYTIKDALGLLLFLLSLMTLTLFSPDLL 250
Query: 191 GDPDNFTPANPLVTPVHIQPE*YFLXAYAILRSIPNKLGGV 69
GDPDN+T ANPL TP HI+PE YFL AY ILRS+PNKLGGV
Sbjct: 251 GDPDNYTLANPLNTPPHIKPEWYFLFAYTILRSVPNKLGGV 291
>UniRef50_Q950S3 Cluster: Cytochrome b; n=144; Eukaryota|Rep:
Cytochrome b - Spizellomyces punctatus
Length = 396
Score = 163 bits (396), Expect = 3e-39
Identities = 85/161 (52%), Positives = 100/161 (62%)
Frame = -2
Query: 551 YVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXX 372
YVLP GQ+SFWGATVITNLLSAIP++GT V + GGF+VDNATL RF++
Sbjct: 132 YVLPWGQMSFWGATVITNLLSAIPWIGTDFVLFVWGGFSVDNATLNRFFSLHYLLPFILA 191
Query: 371 XXXXXXXXXXHQTGSNNPLGLNRNLDKIPFHPFFTFKDXXXXXXXXXXXXXXXXINPYLL 192
HQ GSNNP G++ + D++ FHP+FT KD PY L
Sbjct: 192 ALVVMHLLALHQDGSNNPEGISSSSDRLRFHPYFTSKDLVGFVWMAILLSIFVFFAPYYL 251
Query: 191 GDPDNFTPANPLVTPVHIQPE*YFLXAYAILRSIPNKLGGV 69
G PDN PANPLVTP I PE YFL YAILR+IP+KLGGV
Sbjct: 252 GHPDNSIPANPLVTPHSIVPEWYFLPFYAILRAIPSKLGGV 292
>UniRef50_P42792 Cluster: Cytochrome b; n=6041; root|Rep: Cytochrome
b - Arabidopsis thaliana (Mouse-ear cress)
Length = 393
Score = 158 bits (383), Expect = 1e-37
Identities = 81/161 (50%), Positives = 98/161 (60%)
Frame = -2
Query: 551 YVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXX 372
YVLP GQ+SFWGATVIT+L SAIP +G +V + GGF+VDNATL RF++
Sbjct: 138 YVLPWGQMSFWGATVITSLASAIPVVGDTIVTWLWGGFSVDNATLNRFFSLHYLLPFILV 197
Query: 371 XXXXXXXXXXHQTGSNNPLGLNRNLDKIPFHPFFTFKDXXXXXXXXXXXXXXXXINPYLL 192
HQ GSNNPLG++ +DKI F+P+F KD P +L
Sbjct: 198 GASLLHLAALHQYGSNNPLGVHSEMDKIAFYPYFYVKDLVGWVAFAIFFSIWIFYAPNVL 257
Query: 191 GDPDNFTPANPLVTPVHIQPE*YFLXAYAILRSIPNKLGGV 69
G PDN+ PANP+ TP HI PE YFL YAILRSIP+K GGV
Sbjct: 258 GHPDNYIPANPMSTPPHIVPEWYFLPIYAILRSIPDKAGGV 298
>UniRef50_Q2I6Z5 Cluster: Cytochrome b; n=41; Fungi/Metazoa
group|Rep: Cytochrome b - Lottia digitalis (California
fingered limpet)
Length = 389
Score = 156 bits (378), Expect = 4e-37
Identities = 80/161 (49%), Positives = 99/161 (61%)
Frame = -2
Query: 551 YVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXX 372
YVLP GQ+SFWGATVITNLL+AIP +G+ LV + GGF+V TLTRFY+
Sbjct: 135 YVLPWGQMSFWGATVITNLLTAIPMVGSPLVKWVWGGFSVSGVTLTRFYSLHFILPFVLS 194
Query: 371 XXXXXXXXXXHQTGSNNPLGLNRNLDKIPFHPFFTFKDXXXXXXXXXXXXXXXXINPYLL 192
H GS+NPLG++ + KI FHP+++ KD + P++L
Sbjct: 195 MLVLGHVILLHDKGSSNPLGISSDTGKIRFHPYYSTKDLLGGCVFLTLFMGLVLLYPHML 254
Query: 191 GDPDNFTPANPLVTPVHIQPE*YFLXAYAILRSIPNKLGGV 69
G P+NF PANPL TP HIQPE YFL AY ILRS+PNK GV
Sbjct: 255 GAPENFFPANPLSTPAHIQPEWYFLFAYTILRSMPNKSLGV 295
>UniRef50_P23134 Cluster: Cytochrome b; n=8595; root|Rep: Cytochrome
b - Rhodospirillum rubrum
Length = 405
Score = 153 bits (372), Expect = 2e-36
Identities = 79/163 (48%), Positives = 96/163 (58%), Gaps = 2/163 (1%)
Frame = -2
Query: 551 YVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXX 372
YVLP GQ+SFWGATVITNL SAIP +G +V + GGF+VDN TL RF++
Sbjct: 144 YVLPWGQMSFWGATVITNLFSAIPVVGDDIVTLLWGGFSVDNPTLNRFFSLHYLFPMLLF 203
Query: 371 XXXXXXXXXXHQTGSNNPLGLNRN--LDKIPFHPFFTFKDXXXXXXXXXXXXXXXXINPY 198
H SNNPLG++ D IPFHP++T KD P
Sbjct: 204 AVVFLHMWALHVKKSNNPLGIDAKGPFDTIPFHPYYTVKDAFGLGIFLMVFCFFVFFAPN 263
Query: 197 LLGDPDNFTPANPLVTPVHIQPE*YFLXAYAILRSIPNKLGGV 69
G+PDN+ PANP+VTP HI PE YFL YAILR++P+KLGGV
Sbjct: 264 FFGEPDNYIPANPMVTPTHIVPEWYFLPFYAILRAVPDKLGGV 306
>UniRef50_A6YHJ9 Cluster: Apocytochrome b; n=2; Hexasterophora|Rep:
Apocytochrome b - Iphiteon panicea
Length = 397
Score = 152 bits (369), Expect = 5e-36
Identities = 76/161 (47%), Positives = 91/161 (56%)
Frame = -2
Query: 551 YVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXX 372
YVLP GQ+SFW ATVITNL SAIPY+G +V I G F++ NATL RFY+
Sbjct: 138 YVLPWGQMSFWAATVITNLFSAIPYIGNTIVLWIWGSFSISNATLNRFYSLHYLLPFILT 197
Query: 371 XXXXXXXXXXHQTGSNNPLGLNRNLDKIPFHPFFTFKDXXXXXXXXXXXXXXXXINPYLL 192
+ +NP G +D +PFH ++T KD P +
Sbjct: 198 TLIGMHILALQEENHSNPTGTQSEVDSLPFHQYYTTKDSQTIILTTIIIAMIITHIPNIF 257
Query: 191 GDPDNFTPANPLVTPVHIQPE*YFLXAYAILRSIPNKLGGV 69
DP+NF ANPL+TP HIQPE Y L AYAILRSIPNKLGGV
Sbjct: 258 TDPENFIKANPLITPTHIQPEWYLLFAYAILRSIPNKLGGV 298
>UniRef50_Q8WF54 Cluster: Cytochrome b; n=23; Eukaryota|Rep:
Cytochrome b - Venerupis (Ruditapes) philippinarum
Length = 440
Score = 151 bits (367), Expect = 1e-35
Identities = 77/161 (47%), Positives = 97/161 (60%)
Frame = -2
Query: 551 YVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXX 372
YVLP GQ+SFWGATVITNL A+PY+G+ L+ + GG V +ATL RF+
Sbjct: 142 YVLPWGQMSFWGATVITNLFGAVPYVGSTLMEWVWGGHCVGDATLKRFFVLHFVSPFIIA 201
Query: 371 XXXXXXXXXXHQTGSNNPLGLNRNLDKIPFHPFFTFKDXXXXXXXXXXXXXXXXINPYLL 192
H+TGS+NPLG++ + D +PFH ++ KD +P L
Sbjct: 202 ALVALHLFFLHETGSSNPLGVDSSGDLVPFHNYYLLKDLVGMVLMGLALAVVCLNSPDLF 261
Query: 191 GDPDNFTPANPLVTPVHIQPE*YFLXAYAILRSIPNKLGGV 69
DP NF ANP+ TPVHIQPE YFL AY+ILRSIP+KLGGV
Sbjct: 262 LDPTNFIVANPMKTPVHIQPEWYFLFAYSILRSIPSKLGGV 302
>UniRef50_Q00228 Cluster: Cytochrome b; n=19; Mytilus|Rep:
Cytochrome b - Mytilus edulis (Blue mussel)
Length = 397
Score = 150 bits (364), Expect = 2e-35
Identities = 75/161 (46%), Positives = 96/161 (59%)
Frame = -2
Query: 551 YVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXX 372
Y LP GQ+S+WGATVITN+LS P +G ++ + GG+ V NATL RFYT
Sbjct: 146 YTLPWGQMSYWGATVITNMLSVSPVVGESMLRYVWGGWTVCNATLKRFYTLHFLLPFVMV 205
Query: 371 XXXXXXXXXXHQTGSNNPLGLNRNLDKIPFHPFFTFKDXXXXXXXXXXXXXXXXINPYLL 192
H+ GSNNPLG+ +PFHPF+T KD ++P LL
Sbjct: 206 AVVFLHLFFLHEKGSNNPLGIESGTMCVPFHPFYTIKDLFGYVCFSFFFMYLVCVDPELL 265
Query: 191 GDPDNFTPANPLVTPVHIQPE*YFLXAYAILRSIPNKLGGV 69
G+ N+ PANP+ TP+H+QPE YF+ AYAILRSIP+K GGV
Sbjct: 266 GNHLNYWPANPMKTPIHVQPEWYFMFAYAILRSIPHKAGGV 306
>UniRef50_Q9B305 Cluster: Cytochrome b; n=19; Eukaryota|Rep:
Cytochrome b - Ranina ranina
Length = 179
Score = 149 bits (360), Expect = 7e-35
Identities = 74/132 (56%), Positives = 84/132 (63%)
Frame = -2
Query: 551 YVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXX 372
YVLP GQ+SFWGATVITNL SAIP++GT LV I GGF+V NATLTRF+T
Sbjct: 48 YVLPWGQMSFWGATVITNLFSAIPFIGTDLVQWIWGGFSVGNATLTRFFTFHFILPFIVL 107
Query: 371 XXXXXXXXXXHQTGSNNPLGLNRNLDKIPFHPFFTFKDXXXXXXXXXXXXXXXXINPYLL 192
HQ G+NNPLG++ DKIPFHP+FTFKD +NPYLL
Sbjct: 108 AASLVHILFLHQAGANNPLGISSQSDKIPFHPYFTFKDIVGFVVMLSALIILTLLNPYLL 167
Query: 191 GDPDNFTPANPL 156
GDPDNF PANPL
Sbjct: 168 GDPDNFVPANPL 179
>UniRef50_Q8M370 Cluster: Cytochrome b; n=46; Neoptera|Rep:
Cytochrome b - Procladius villosimanus
Length = 233
Score = 147 bits (357), Expect = 2e-34
Identities = 76/134 (56%), Positives = 84/134 (62%)
Frame = -2
Query: 509 VITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXHQTG 330
VITNLLSAIPYLG L + GGFAVDNATLTRF+ HQTG
Sbjct: 1 VITNLLSAIPYLGNELXQWLWGGFAVDNATLTRFFXFHFLFPFIIAALTTIHLLFLHQTG 60
Query: 329 SNNPLGLNRNLDKIPFHPFFTFKDXXXXXXXXXXXXXXXXINPYLLGDPDNFTPANPLVT 150
S NPLG+N N+DKIPFHP+FT+KD I+PY +GDPDNF PANPLVT
Sbjct: 61 SPNPLGINSNVDKIPFHPYFTYKDIFGFVAMTMILIMLTLISPYGMGDPDNFIPANPLVT 120
Query: 149 PVHIQPE*YFLXAY 108
P HIQPE YFL AY
Sbjct: 121 PPHIQPEWYFLFAY 134
>UniRef50_Q0Z877 Cluster: Cytochrome b; n=7; Mermithidae|Rep:
Cytochrome b - Agamermis sp. BH-2006
Length = 388
Score = 144 bits (349), Expect = 1e-33
Identities = 76/161 (47%), Positives = 98/161 (60%)
Frame = -2
Query: 551 YVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXX 372
YVLP GQ+S WGATVITNLLSAIP +G ++V I GG+ V N T+ F++
Sbjct: 126 YVLPWGQMSLWGATVITNLLSAIPVIGKMMVEWIWGGYFVSNFTMKMFFSFHFLVPFIIL 185
Query: 371 XXXXXXXXXXHQTGSNNPLGLNRNLDKIPFHPFFTFKDXXXXXXXXXXXXXXXXINPYLL 192
H GSNNP+G N +L KI F+P ++FKD +PY +
Sbjct: 186 IFIMIHLIILHYYGSNNPIG-NFSLMKIEFNPIYSFKDLMSIIFIILMFVLFFY-SPYFM 243
Query: 191 GDPDNFTPANPLVTPVHIQPE*YFLXAYAILRSIPNKLGGV 69
DP+NF +NP+++P+HIQPE YFL YAILR+IPNKLGGV
Sbjct: 244 VDPENFIKSNPMISPIHIQPEWYFLQYYAILRAIPNKLGGV 284
>UniRef50_P51131 Cluster: Cytochrome b/c1 [Contains: Cytochrome b;
Cytochrome c1]; n=2697; root|Rep: Cytochrome b/c1
[Contains: Cytochrome b; Cytochrome c1] - Bradyrhizobium
japonicum
Length = 687
Score = 139 bits (337), Expect = 4e-32
Identities = 77/163 (47%), Positives = 89/163 (54%), Gaps = 2/163 (1%)
Frame = -2
Query: 551 YVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXX 372
YVLP GQ+SFWGATVITNL SAIPY G +V + GG++V N TL RF++
Sbjct: 146 YVLPWGQMSFWGATVITNLFSAIPYFGESIVTLLWGGYSVGNPTLNRFFSLHYLLPFLIA 205
Query: 371 XXXXXXXXXXHQTGSNNPLGLNRNLDK--IPFHPFFTFKDXXXXXXXXXXXXXXXXINPY 198
H G NNP G+ +K +PF P T KD P
Sbjct: 206 GVVVLHVWALHVAGQNNPEGVEPKSEKDTVPFTPHATIKDMFGVACFLLLYAWFIFYMPN 265
Query: 197 LLGDPDNFTPANPLVTPVHIQPE*YFLXAYAILRSIPNKLGGV 69
LGD DN+ PANP VTP HI PE Y+L YAILRSIPNKL GV
Sbjct: 266 YLGDADNYIPANPGVTPPHIVPEWYYLPFYAILRSIPNKLAGV 308
>UniRef50_O48101 Cluster: Cytochrome b; n=110; Serpentes|Rep:
Cytochrome b - Micrurus fulvius microgalbineus (Mexican
coral snake)
Length = 371
Score = 131 bits (316), Expect = 1e-29
Identities = 72/177 (40%), Positives = 89/177 (50%)
Frame = -2
Query: 551 YVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXX 372
YVLP GQ+SFW ATVITNLL+AIPYLG + + GGF++++ TLTRF
Sbjct: 123 YVLPWGQMSFWAATVITNLLTAIPYLGVAVTTWLWGGFSINDPTLTRFCALHFILPFIII 182
Query: 371 XXXXXXXXXXHQTGSNNPLGLNRNLDKIPFHPFFTFKDXXXXXXXXXXXXXXXXINPYLL 192
H GSNNPLG N ++DKIPFHP+ ++KD ++P LL
Sbjct: 183 SLSSIHIILLHNEGSNNPLGTNSDIDKIPFHPYHSYKDFMTTTSMIILLPISLSVSPDLL 242
Query: 191 GDPDNFTPANPLVTPVHIQPE*YFLXAYAILRSIPNKLGGVXXXXXXXXXXXXLPFT 21
DP+ T NP Y +LRSIPNKLGG PFT
Sbjct: 243 XDPEKLTKPNPXXXXXXXXXXXXXXXXYGLLRSIPNKLGGTLALLMSILILTLPPFT 299
>UniRef50_Q8LYW3 Cluster: Apocytochrome b; n=2; Polytomella|Rep:
Apocytochrome b - Polytomella parva
Length = 370
Score = 130 bits (313), Expect = 3e-29
Identities = 74/183 (40%), Positives = 94/183 (51%)
Frame = -2
Query: 551 YVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXX 372
YVLP GQ+SFWGATVIT+L+SA+P +GT LV + GGF+V N TL RF++
Sbjct: 132 YVLPWGQMSFWGATVITSLVSAVPIVGTDLVYYLWGGFSVSNPTLNRFFSFHYLLPFVLA 191
Query: 371 XXXXXXXXXXHQTGSNNPLGLNRNLDKIPFHPFFTFKDXXXXXXXXXXXXXXXXINPYLL 192
H GS NPL +N ++ K+PF ++ KD P L
Sbjct: 192 GLSIAHLAALHSYGSTNPLSIN-SVAKVPFGSYYIIKDLLGVLIIGAAMIVLAFFFPEAL 250
Query: 191 GDPDNFTPANPLVTPVHIQPE*YFLXAYAILRSIPNKLGGVXXXXXXXXXXXXLPFTLKK 12
DN+ PANP TP HI PE YFL YAILRSIP+K G+ PF +
Sbjct: 251 NHSDNYIPANPYSTPAHIVPEWYFLPVYAILRSIPDKGIGILAVLLFFIGLGLQPFLSQG 310
Query: 11 KIQ 3
K +
Sbjct: 311 KAE 313
>UniRef50_Q5DNB7 Cluster: Cytochrome b; n=1; Leptorhynchoides
thecatus|Rep: Cytochrome b - Leptorhynchoides thecatus
Length = 372
Score = 128 bits (309), Expect = 1e-28
Identities = 69/161 (42%), Positives = 89/161 (55%)
Frame = -2
Query: 551 YVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXX 372
YVLP G +S+WG TV+TN+LSAIP +G LV I GG + +TL RF++
Sbjct: 127 YVLPWGSMSYWGMTVVTNMLSAIPMVGVYLVETIWGGSSAGVSTLVRFFSFHYLLSLFIM 186
Query: 371 XXXXXXXXXXHQTGSNNPLGLNRNLDKIPFHPFFTFKDXXXXXXXXXXXXXXXXINPYLL 192
H+ GS+NPLG+ + +K FHP F+ KD + PYLL
Sbjct: 187 VFILIHLILLHECGSSNPLGVYYSCEKFTFHPLFSLKDTLVFVLVVFLYWFCIFVCPYLL 246
Query: 191 GDPDNFTPANPLVTPVHIQPE*YFLXAYAILRSIPNKLGGV 69
D NF N ++TP HI+PE YFL Y ILRS P+KLGGV
Sbjct: 247 LDAINFEEINFMMTPSHIKPEWYFLFIYCILRSTPSKLGGV 287
>UniRef50_Q2HJL4 Cluster: Cytochrome b; n=1; Campanulotes bidentatus
compar|Rep: Cytochrome b - Campanulotes bidentatus
compar (small pigeon louse)
Length = 374
Score = 124 bits (300), Expect = 1e-27
Identities = 77/184 (41%), Positives = 93/184 (50%), Gaps = 1/184 (0%)
Frame = -2
Query: 551 YVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXX 372
YV P GQI GATVIT+LLSAIPY+G LV + GGF V TL RF++
Sbjct: 136 YVPPWGQIFLGGATVITSLLSAIPYMGGFLVKWVWGGFFVKGPTLHRFFSLHYLLPLILS 195
Query: 371 XXXXXXXXXXHQTGSNNPLGLNRNLDKIPFHPFFTFKDXXXXXXXXXXXXXXXXINPYLL 192
NP+G + N K F P+F F D + +L
Sbjct: 196 VFVFFQVFFFQSKSGVNPMGGSLNSKKGFFVPYFFFVDLGGIFFFFFFFFMFVFVFHDVL 255
Query: 191 GDPDNFTPANPLVTPVHIQPE*YFLXAYAILRSIPNKLGGVXXXXXXXXXXXXLPF-TLK 15
DPDNF PANP+ TP HIQPE YFL AY ILRS+P+KLGGV LPF +L
Sbjct: 256 MDPDNFIPANPMSTPPHIQPEWYFLFAYTILRSVPSKLGGVVALVFSILFLVFLPFISLS 315
Query: 14 KKIQ 3
K ++
Sbjct: 316 KSLK 319
>UniRef50_Q6JCT1 Cluster: Cytochrome b; n=6; Neoptera|Rep:
Cytochrome b - Aleyrodes elevatus
Length = 232
Score = 122 bits (294), Expect = 7e-27
Identities = 66/148 (44%), Positives = 84/148 (56%)
Frame = -2
Query: 512 TVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXHQT 333
TVITNLLS+IP G ++V I GG++V N TL RF++ H
Sbjct: 1 TVITNLLSSIPIWGEMIVYWIWGGYSVGNPTLIRFFSFHFFFPFLMIFTIFLHLIFLHGH 60
Query: 332 GSNNPLGLNRNLDKIPFHPFFTFKDXXXXXXXXXXXXXXXXINPYLLGDPDNFTPANPLV 153
GS NPLGL + DKI F+P+F KD P +L D +NF AN ++
Sbjct: 61 GSGNPLGLGGSYDKIYFYPYFMLKDFIGFFFFYIYLFICGFFFPLILVDSENFIVANSMI 120
Query: 152 TPVHIQPE*YFLXAYAILRSIPNKLGGV 69
TP+HIQPE Y+L +YAILRS+PNKLGGV
Sbjct: 121 TPLHIQPEWYYLFSYAILRSVPNKLGGV 148
>UniRef50_Q06SB2 Cluster: Cytochrome b; n=1; Hiatella arctica|Rep:
Cytochrome b - Hiatella arctica
Length = 384
Score = 122 bits (294), Expect = 7e-27
Identities = 66/161 (40%), Positives = 88/161 (54%)
Frame = -2
Query: 551 YVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXX 372
YVLP GQ+SFWGATVI+N L+ IP+ G L+ + GG++V + TL+RF+
Sbjct: 133 YVLPAGQMSFWGATVISNFLTVIPFFGDTLLKYVLGGYSVCDLTLSRFFVAHFLAPFLIS 192
Query: 371 XXXXXXXXXXHQTGSNNPLGLNRNLDKIPFHPFFTFKDXXXXXXXXXXXXXXXXINPYLL 192
H+ G++NPLG++ D I P + FKD +L
Sbjct: 193 LMVLFHLIWGHEKGASNPLGVS-TTDWITLSPGYVFKDLAGGFFMESLVLGMFSSYSWLF 251
Query: 191 GDPDNFTPANPLVTPVHIQPE*YFLXAYAILRSIPNKLGGV 69
DP N ANP+ TPVHIQPE YFL AY+ILR + +K GGV
Sbjct: 252 QDPTNSIMANPMYTPVHIQPEWYFLFAYSILRCVDSKTGGV 292
>UniRef50_Q94NM9 Cluster: Cytochrome b; n=4; Cricetidae|Rep:
Cytochrome b - Lemmus lemmus (Norway lemming)
Length = 211
Score = 120 bits (290), Expect = 2e-26
Identities = 56/90 (62%), Positives = 63/90 (70%)
Frame = -2
Query: 338 QTGSNNPLGLNRNLDKIPFHPFFTFKDXXXXXXXXXXXXXXXXINPYLLGDPDNFTPANP 159
+TGSNNP GLN + DKIPFHP++T KD P +LGDPDN+TPANP
Sbjct: 121 ETGSNNPTGLNSDADKIPFHPYYTIKDLLGALLLLMALMILVLFFPDILGDPDNYTPANP 180
Query: 158 LVTPVHIQPE*YFLXAYAILRSIPNKLGGV 69
L TP HI+PE YFL AYAILRSIPNKLGGV
Sbjct: 181 LNTPPHIKPEWYFLFAYAILRSIPNKLGGV 210
>UniRef50_P05418 Cluster: Cytochrome b; n=11;
Alphaproteobacteria|Rep: Cytochrome b - Paracoccus
denitrificans
Length = 440
Score = 118 bits (285), Expect = 8e-26
Identities = 69/161 (42%), Positives = 81/161 (50%), Gaps = 8/161 (4%)
Frame = -2
Query: 551 YVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXX 372
YVLP GQ+SFWGATVIT L AIP +G + + GG AVDN TL RF++
Sbjct: 147 YVLPWGQMSFWGATVITGLFGAIPGVGEAIQTWLLGGPAVDNPTLNRFFSLHYLLPFVIA 206
Query: 371 XXXXXXXXXXHQTGSNNPLGL--------NRNLDKIPFHPFFTFKDXXXXXXXXXXXXXX 216
H TG+NNP G+ D +PF P+F KD
Sbjct: 207 ALVVVHIWAFHTTGNNNPTGVEVRRGSKEEAKKDTLPFWPYFVIKDLFALAVVLVVFFAI 266
Query: 215 XXINPYLLGDPDNFTPANPLVTPVHIQPE*YFLXAYAILRS 93
P LG PDN+ ANPLVTP HI PE YFL YAILR+
Sbjct: 267 VGFMPNYLGHPDNYIEANPLVTPAHIVPEWYFLPFYAILRA 307
>UniRef50_Q02761 Cluster: Cytochrome b; n=15; Rhodobacterales|Rep:
Cytochrome b - Rhodobacter sphaeroides (Rhodopseudomonas
sphaeroides)
Length = 445
Score = 118 bits (284), Expect = 1e-25
Identities = 69/161 (42%), Positives = 81/161 (50%), Gaps = 8/161 (4%)
Frame = -2
Query: 551 YVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXX 372
YVLP GQ+SFWGATVIT L AIP +G + + GG AVDNATL RF++
Sbjct: 147 YVLPWGQMSFWGATVITGLFGAIPGIGHSIQTWLLGGPAVDNATLNRFFSLHYLLPFVIA 206
Query: 371 XXXXXXXXXXHQTGSNNPLGL--------NRNLDKIPFHPFFTFKDXXXXXXXXXXXXXX 216
H TG+NNP G+ D +PF P+F KD
Sbjct: 207 ALVAIHIWAFHSTGNNNPTGVEVRRTSKAEAQKDTVPFWPYFIIKDVFALAVVLLVFFAI 266
Query: 215 XXINPYLLGDPDNFTPANPLVTPVHIQPE*YFLXAYAILRS 93
P LG PDN+ ANPL TP HI PE YFL YAILR+
Sbjct: 267 VGFMPNYLGHPDNYIEANPLSTPAHIVPEWYFLPFYAILRA 307
>UniRef50_Q9B8A8 Cluster: Apocytochrome b; n=1; Trichinella
spiralis|Rep: Apocytochrome b - Trichinella spiralis
(Trichina worm)
Length = 371
Score = 117 bits (282), Expect = 2e-25
Identities = 65/161 (40%), Positives = 87/161 (54%)
Frame = -2
Query: 551 YVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXX 372
YV+P G +SFW ATVIT+ +SAIP LG ++ I GG+++ TL F+T
Sbjct: 128 YVIPWGNMSFWAATVITSFMSAIPILGESILYWIWGGYSITGRTLQFFFTLHYLLPFVIS 187
Query: 371 XXXXXXXXXXHQTGSNNPLGLNRNLDKIPFHPFFTFKDXXXXXXXXXXXXXXXXINPYLL 192
H GS+NPLG + ++ K FHPFFT KD PY
Sbjct: 188 AIAMIHLLLLHSKGSSNPLGTHSHMLKTKFHPFFTNKDMMNIMILMIMGWSLISY-PYWS 246
Query: 191 GDPDNFTPANPLVTPVHIQPE*YFLXAYAILRSIPNKLGGV 69
DP+NF+ A+ L +P++IQPE YFL Y LRS +KLGG+
Sbjct: 247 SDPENFSYADRLSSPINIQPEWYFLPMYGFLRSSDSKLGGL 287
>UniRef50_Q4FE09 Cluster: Cytochrome b apoenzyme; n=4;
Pectinidae|Rep: Cytochrome b apoenzyme - Placopecten
magellanicus (Sea scallop)
Length = 395
Score = 117 bits (282), Expect = 2e-25
Identities = 62/161 (38%), Positives = 87/161 (54%)
Frame = -2
Query: 551 YVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXX 372
YVLP GQ+++W A VI+++++AIP +G + + GG+AV N TL R ++
Sbjct: 132 YVLPWGQMAYWAAQVISSMVTAIPKVGGEVAMWVWGGYAVGNITLKRLFSVHFLLPFVIL 191
Query: 371 XXXXXXXXXXHQTGSNNPLGLNRNLDKIPFHPFFTFKDXXXXXXXXXXXXXXXXINPYLL 192
H +GS NPLGL+ + + FH FF+ KD PY L
Sbjct: 192 AVVLLHLLFLHSSGSGNPLGLDSDCSLVRFHSFFSVKDLLGVSGGCCFLIFMVSFYPYSL 251
Query: 191 GDPDNFTPANPLVTPVHIQPE*YFLXAYAILRSIPNKLGGV 69
D ++F P + + TP I PE YFL AYAILRS+PNK GG+
Sbjct: 252 VDGESFVPCDYMDTPPSIHPEWYFLFAYAILRSVPNKAGGI 292
>UniRef50_Q5W910 Cluster: Cytochrome b; n=1; Lingula anatina|Rep:
Cytochrome b - Lingula unguis
Length = 418
Score = 117 bits (281), Expect = 3e-25
Identities = 67/163 (41%), Positives = 85/163 (52%), Gaps = 2/163 (1%)
Frame = -2
Query: 551 YVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXX 372
YVLP GQ+S+W + VIT+LLS IPY+G LV I GGF+V ATLTRFY+
Sbjct: 129 YVLPWGQMSYWASVVITSLLSTIPYIGPSLVEWIWGGFSVGQATLTRFYSLHFILPFVMV 188
Query: 371 XXXXXXXXXXHQTGSNNPLGL--NRNLDKIPFHPFFTFKDXXXXXXXXXXXXXXXXINPY 198
H+TGS+NPLGL + FHP ++ D + +
Sbjct: 189 IVVIIHVGLLHETGSSNPLGLYDPSGVCMRSFHPLYSCNDLFFCLVAMGYLIKLSAFHTW 248
Query: 197 LLGDPDNFTPANPLVTPVHIQPE*YFLXAYAILRSIPNKLGGV 69
+N+ A+P+ TP HI PE YFL Y ILRS P K GGV
Sbjct: 249 AFVPCENWIKADPMTTPKHITPEWYFLWVYTILRSAPTKGGGV 291
>UniRef50_Q952Z5 Cluster: Cytochrome b; n=1; Partula turgida|Rep:
Cytochrome b - Partula turgida
Length = 211
Score = 116 bits (278), Expect = 6e-25
Identities = 60/125 (48%), Positives = 71/125 (56%)
Frame = -2
Query: 446 GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXHQTGSNNPLGLNRNLDKIPFHPFFT 267
GGF+V ATL RF++ H+ GS NPLG N +++KI FHP+FT
Sbjct: 6 GGFSVGQATLNRFFSLHFILPFIILVLVIVHLMFLHEKGSTNPLGHNMHINKILFHPYFT 65
Query: 266 FKDXXXXXXXXXXXXXXXXINPYLLGDPDNFTPANPLVTPVHIQPE*YFLXAYAILRSIP 87
KD PYLL DP+N AN +VTPVHIQPE YFL AYAILRSIP
Sbjct: 66 LKDVVGFLLVLFCLIMMCAYFPYLLSDPENLINANSMVTPVHIQPEWYFLFAYAILRSIP 125
Query: 86 NKLGG 72
+KLGG
Sbjct: 126 SKLGG 130
>UniRef50_Q4KRX9 Cluster: Cytochrome b; n=3; Crassostrea|Rep:
Cytochrome b - Crassostrea virginica (Eastern oyster)
Length = 403
Score = 111 bits (268), Expect = 9e-24
Identities = 61/161 (37%), Positives = 84/161 (52%)
Frame = -2
Query: 551 YVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXX 372
YVLP G +S+WG TVITN+++ +P G ++ GGF + + TL R +
Sbjct: 133 YVLPWGVMSYWGLTVITNMMTVVPG-GARALDWFQGGFVISSLTLKRVFVLHFILPFVIL 191
Query: 371 XXXXXXXXXXHQTGSNNPLGLNRNLDKIPFHPFFTFKDXXXXXXXXXXXXXXXXINPYLL 192
HQ GS+NPLGL++ +PFHP+++ KD +
Sbjct: 192 GLALVHVLILHQNGSSNPLGLDQEGINVPFHPYYSIKDLAGFAVLVAMLIGMAFTFASVT 251
Query: 191 GDPDNFTPANPLVTPVHIQPE*YFLXAYAILRSIPNKLGGV 69
DP + P N + TP I+PE YFL AYAILRSIP+K GGV
Sbjct: 252 ADPLQWQPINKMKTPAVIKPEWYFLYAYAILRSIPHKAGGV 292
>UniRef50_Q1HTY3 Cluster: Cytochrome oxidase B; n=11;
Stolidobranchia|Rep: Cytochrome oxidase B - Polycarpa
papillata
Length = 141
Score = 108 bits (260), Expect = 9e-23
Identities = 59/134 (44%), Positives = 73/134 (54%)
Frame = -2
Query: 536 GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXX 357
GQ+ FWGATVITN LS IPY G +VN I GGF+V + TLTRFYT
Sbjct: 5 GQMGFWGATVITNFLSVIPYYGGDIVNWIWGGFSVGSPTLTRFYTFHFLFPFLIIVFSLV 64
Query: 356 XXXXXHQTGSNNPLGLNRNLDKIPFHPFFTFKDXXXXXXXXXXXXXXXXINPYLLGDPDN 177
H+TGS+NPL L+ + K+ F P+ KD P + GDP+N
Sbjct: 65 HLVFLHRTGSSNPLKLSSSSLKMSFWPYSGVKDMLGFLLVFLLFFFVVLFLPTVFGDPEN 124
Query: 176 FTPANPLVTPVHIQ 135
F ANP+VTPVHI+
Sbjct: 125 FMKANPMVTPVHIK 138
>UniRef50_Q5FTF2 Cluster: Ubiquinol-cytochrome c reductase
cytochrome b subunit; n=1; Gluconobacter oxydans|Rep:
Ubiquinol-cytochrome c reductase cytochrome b subunit -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 392
Score = 106 bits (255), Expect = 4e-22
Identities = 62/163 (38%), Positives = 82/163 (50%), Gaps = 2/163 (1%)
Frame = -2
Query: 551 YVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXX 372
YVLP GQ+S+WGATVI N + AIP +G L + GG + N L R +
Sbjct: 145 YVLPWGQMSYWGATVILNAVHAIPLIGQPLSELLLGGDTLGNVALHRLFVLHFTMAFAIL 204
Query: 371 XXXXXXXXXXHQTGSNNPLGLN--RNLDKIPFHPFFTFKDXXXXXXXXXXXXXXXXINPY 198
H SNNP G++ +PFHP++T +D P
Sbjct: 205 GVIALHVAALHVVKSNNPSGVDPVNPSQTLPFHPYYTSRDGFALCLFLMVYAGLVFFLPD 264
Query: 197 LLGDPDNFTPANPLVTPVHIQPE*YFLXAYAILRSIPNKLGGV 69
LL DN+ ANPLVTP I+PE YF YAILR++P++LGG+
Sbjct: 265 LLTLADNYIQANPLVTPRDIRPEWYFAPFYAILRAVPSRLGGL 307
>UniRef50_Q6TY86 Cluster: Cytochrome b; n=1; Xiphinema
americanum|Rep: Cytochrome b - Xiphinema americanum
Length = 366
Score = 106 bits (255), Expect = 4e-22
Identities = 68/162 (41%), Positives = 88/162 (54%), Gaps = 1/162 (0%)
Frame = -2
Query: 551 YVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXX 372
YVLP GQ+SFWGATVI NLLS +PY G +LV + GGF V AT + F+
Sbjct: 124 YVLPWGQMSFWGATVIINLLSILPY-GKMLVVWLWGGFYVSAATCSFFFALHYIVPFAVL 182
Query: 371 XXXXXXXXXXHQTGSNNPLGLNRNLD-KIPFHPFFTFKDXXXXXXXXXXXXXXXXINPYL 195
H +GS++ G+N + K+ F F+ KD + P L
Sbjct: 183 VVIMVHLFFLHFSGSSSFGGMNYSDSLKVKFGLLFSLKDMVNVIFIWVGFLVILSM-PDL 241
Query: 194 LGDPDNFTPANPLVTPVHIQPE*YFLXAYAILRSIPNKLGGV 69
DP NF PA+ +PVHIQPE YFL YA+LR+IPNK+GG+
Sbjct: 242 FSDPVNFLPADLSSSPVHIQPEWYFLHFYAVLRAIPNKVGGL 283
>UniRef50_P24890 Cluster: Cytochrome b; n=210; Chromadorea|Rep:
Cytochrome b - Caenorhabditis elegans
Length = 370
Score = 105 bits (253), Expect = 6e-22
Identities = 65/161 (40%), Positives = 82/161 (50%)
Frame = -2
Query: 551 YVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXX 372
YVL Q+SFW A VIT+LLS IP G +V I GF V ATL F+
Sbjct: 128 YVLVWAQMSFWAAVVITSLLSVIPIWGPTIVTWIWSGFGVTGATLKFFFVLHFLLPWAIL 187
Query: 371 XXXXXXXXXXHQTGSNNPLGLNRNLDKIPFHPFFTFKDXXXXXXXXXXXXXXXXINPYLL 192
H TGS + L + + DK+ F P + KD P+ L
Sbjct: 188 VIVLGHLIFLHSTGSTSSLYCHGDYDKVCFSPEYLGKDAYNIVIWLLFIVLSLIY-PFNL 246
Query: 191 GDPDNFTPANPLVTPVHIQPE*YFLXAYAILRSIPNKLGGV 69
GD + F A+P+++PVHI PE YFL AYAILR+IPNK+ GV
Sbjct: 247 GDAEMFIEADPMMSPVHIVPEWYFLFAYAILRAIPNKVLGV 287
>UniRef50_O31215 Cluster: Cytochrome b; n=132; cellular
organisms|Rep: Cytochrome b - Chromatium vinosum
(Allochromatium vinosum)
Length = 411
Score = 103 bits (247), Expect = 3e-21
Identities = 65/175 (37%), Positives = 84/175 (48%), Gaps = 16/175 (9%)
Frame = -2
Query: 551 YVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXX 372
Y+LP GQ+S+WGA VI NL +A+P +G L + G F + +ATL RF+
Sbjct: 141 YLLPWGQMSYWGAQVIVNLFAAVPVVGEDLSVWVRGDFVISDATLNRFFAFHFLLPFLLA 200
Query: 371 XXXXXXXXXXHQTGSNNPLGL--------NRNLDK-----IPFHPFFTFKDXXXXXXXXX 231
H GSNNP G+ NR DK IPFHP++T KD
Sbjct: 201 GLVFLHIVALHHVGSNNPDGIEIKEGPKGNRWSDKAPADGIPFHPYYTVKDLMGVVVFLA 260
Query: 230 XXXXXXXINPYLLG---DPDNFTPANPLVTPVHIQPE*YFLXAYAILRSIPNKLG 75
NP + G + NF PANP+ TP HI P YF YA+LR++P G
Sbjct: 261 IFGYVMFFNPTMGGLFLEAPNFQPANPMQTPAHIAPVWYFTPFYAMLRAVPPMYG 315
>UniRef50_Q8M4X4 Cluster: Cytochrome b; n=76; Dinophyceae|Rep:
Cytochrome b - Pfiesteria piscicida
Length = 374
Score = 101 bits (241), Expect = 2e-20
Identities = 64/160 (40%), Positives = 78/160 (48%)
Frame = -2
Query: 551 YVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXX 372
YVLP GQ+SFWGATVITNLLS P L + + GG+ V + TL RF+
Sbjct: 139 YVLPFGQMSFWGATVITNLLSPFPSL----IEWVSGGYCVHSPTLKRFFLFHYQLPFLVC 194
Query: 371 XXXXXXXXXXHQTGSNNPLGLNRNLDKIPFHPFFTFKDXXXXXXXXXXXXXXXXINPYLL 192
H SNNPL + N +KIPF P KD L
Sbjct: 195 GFSILHLFYLHFLSSNNPLRNSTN-NKIPFFPLIFDKDFFGLILVLCLYFFETHFGVSSL 253
Query: 191 GDPDNFTPANPLVTPVHIQPE*YFLXAYAILRSIPNKLGG 72
PDN A L+TP+HI PE YFL YA+L+++PNK G
Sbjct: 254 SHPDNALEACALLTPLHIVPEWYFLCQYAMLKAVPNKNAG 293
>UniRef50_Q94R91 Cluster: Cytochrome b; n=1; Sycoscapter sp.
402|Rep: Cytochrome b - Sycoscapter sp. 402
Length = 157
Score = 100 bits (240), Expect = 2e-20
Identities = 52/120 (43%), Positives = 70/120 (58%)
Frame = -2
Query: 542 P*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXX 363
P GQ+SFWGATVITNL+SAI Y+G +V + GGF+V +ATL RFYT
Sbjct: 2 PWGQMSFWGATVITNLVSAISYVGESVVLWMWGGFSVSDATLNRFYTFHFISDFVILFLV 61
Query: 362 XXXXXXXHQTGSNNPLGLNRNLDKIPFHPFFTFKDXXXXXXXXXXXXXXXXINPYLLGDP 183
HQTGS NP+GLN N++KIPF+P+++ +D ++PY+L P
Sbjct: 62 LIHLVFLHQTGSTNPMGLNSNMNKIPFNPYYSIQDLLGFIILIISFILICFLSPYILPIP 121
>UniRef50_Q8HN51 Cluster: Cytochrome b; n=4; Chromadorea|Rep:
Cytochrome b - Brugia malayi (Filarial nematode worm)
Length = 362
Score = 100 bits (239), Expect = 3e-20
Identities = 60/161 (37%), Positives = 84/161 (52%)
Frame = -2
Query: 551 YVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXX 372
YVL GQ+S+W A VIT+L++++PYLG +V I G F+V TL FY+
Sbjct: 120 YVLIWGQMSYWAAVVITSLMTSVPYLGKYMVWWIWGSFSVCENTLKFFYSIHFIFPWLLL 179
Query: 371 XXXXXXXXXXHQTGSNNPLGLNRNLDKIPFHPFFTFKDXXXXXXXXXXXXXXXXINPYLL 192
H TGS++ L + + DKI F P + FKD + + L
Sbjct: 180 VMVIFHLFFLHFTGSSSSLYCHGDYDKIHFFPSYWFKDGFDIFFYFFLVLFSLYFS-FNL 238
Query: 191 GDPDNFTPANPLVTPVHIQPE*YFLXAYAILRSIPNKLGGV 69
DP F ++ + +P H+ PE YFL A+ ILRS+PNKL GV
Sbjct: 239 SDPMIFVESDSMASPAHVVPEWYFLFAFTILRSVPNKLFGV 279
>UniRef50_Q5NNX9 Cluster: Cytochrome b subunit; n=1; Zymomonas
mobilis|Rep: Cytochrome b subunit - Zymomonas mobilis
Length = 418
Score = 99.1 bits (236), Expect = 7e-20
Identities = 60/170 (35%), Positives = 81/170 (47%), Gaps = 9/170 (5%)
Frame = -2
Query: 551 YVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXX 372
Y L GQ+S+W A VIT L S +P++G + + GGFA + AT+ RF+
Sbjct: 148 YSLVWGQMSYWAAQVITGLFSVVPFVGEKIRIWVLGGFAPNAATVNRFFVLHFTLPFVIL 207
Query: 371 XXXXXXXXXXHQTGSNNPLGLN--RNLDKIPFHPFFTFKDXXXXXXXXXXXXXXXXINPY 198
H+ GS NP G+ + + +P P++ KD P
Sbjct: 208 AVVGLHVWALHRQGSGNPTGIEVKKAEEVVPMQPYYIAKDFVAICVFLLIFCSLVFFYPN 267
Query: 197 LLGDPDNFTPANPLVTPVHIQPE*YFLXAYAILRS-------IPNKLGGV 69
+ DPDN+ PANP TP HI+PE YF YA+LRS IP KL GV
Sbjct: 268 VFTDPDNYIPANPFSTPAHIKPEWYFWPFYAVLRSFTVNFMGIPAKLWGV 317
>UniRef50_Q9B8V1 Cluster: Cytochrome b; n=66; Platyhelminthes|Rep:
Cytochrome b - Schistosoma mekongi
Length = 372
Score = 95.9 bits (228), Expect = 7e-19
Identities = 57/163 (34%), Positives = 87/163 (53%), Gaps = 2/163 (1%)
Frame = -2
Query: 551 YVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNA-TLTRFYTXXXXXXXXX 375
Y+LP Q+S+W ATV+T+++ ++P +G ++ + + GGF+V TL R +
Sbjct: 120 YILPWHQMSYWAATVLTSIILSVPVVGGLIFSYVVGGFSVTLIDTLVRVFPVHISLGFIL 179
Query: 374 XXXXXXXXXXXHQTGSNNPLGL-NRNLDKIPFHPFFTFKDXXXXXXXXXXXXXXXXINPY 198
HQ+GS +PL N D + FH + T KD ++P
Sbjct: 180 LGLIVLHLFYLHQSGSTSPLFFYNGYSDCVYFHSYHTIKDLFAFMVVIVFSNFLVLVDPN 239
Query: 197 LLGDPDNFTPANPLVTPVHIQPE*YFLXAYAILRSIPNKLGGV 69
++ D + F ANPLVTP I+PE YFL YA+LRSI +K+GG+
Sbjct: 240 IILDVEAFIVANPLVTPDSIKPEWYFLLFYAMLRSINSKVGGL 282
>UniRef50_Q02768 Cluster: Cytochrome b; n=889; Apicomplexa|Rep:
Cytochrome b - Plasmodium falciparum
Length = 376
Score = 95.9 bits (228), Expect = 7e-19
Identities = 62/161 (38%), Positives = 78/161 (48%)
Frame = -2
Query: 551 YVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXX 372
YVLP GQ+S+WGATVITNLLS+IP + V I GG+ V + T+ RF+
Sbjct: 126 YVLPWGQMSYWGATVITNLLSSIP----VAVIWICGGYTVSDPTIKRFFVLHFILPFIGL 181
Query: 371 XXXXXXXXXXHQTGSNNPLGLNRNLDKIPFHPFFTFKDXXXXXXXXXXXXXXXXINPYLL 192
H GS NPLG + L KIPF+P D L
Sbjct: 182 CIVFIHIFFLHLHGSTNPLGYDTAL-KIPFYPNLLSLDVKGFNNVIILFLIQSLFGIIPL 240
Query: 191 GDPDNFTPANPLVTPVHIQPE*YFLXAYAILRSIPNKLGGV 69
PDN N VTP I PE YFL YA+L+++P+K G+
Sbjct: 241 SHPDNAIVVNTYVTPSQIVPEWYFLPFYAMLKTVPSKPAGL 281
>UniRef50_A1W459 Cluster: Cytochrome b/b6, N-terminal domain; n=64;
cellular organisms|Rep: Cytochrome b/b6, N-terminal
domain - Acidovorax sp. (strain JS42)
Length = 473
Score = 93.9 bits (223), Expect = 3e-18
Identities = 62/174 (35%), Positives = 83/174 (47%), Gaps = 16/174 (9%)
Frame = -2
Query: 551 YVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYT-XXXXXXXXX 375
Y+LP GQ+S+WGA VI NL SAIP++G L I G + V +ATL RF++
Sbjct: 154 YLLPWGQMSYWGAQVIVNLFSAIPFIGPDLALLIRGDYVVSDATLNRFFSFHVIAVPLVL 213
Query: 374 XXXXXXXXXXXHQTGSNNPLGL------------NRNLDKIPFHPFFTFKDXXXXXXXXX 231
H GSNNP G+ LD +PFHP++T D
Sbjct: 214 LGLVVAHLLALHDVGSNNPDGIEIKGPGKPVDEHGHPLDGVPFHPYYTVHDILGVGVFLF 273
Query: 230 XXXXXXXINPYLLG---DPDNFTPANPLVTPVHIQPE*YFLXAYAILRSIPNKL 78
P L G + +NF PA+PL TP HI P YF Y++LR+I ++
Sbjct: 274 IFSAVVFFAPELGGYFLEYNNFIPADPLQTPAHIAPVWYFTPFYSMLRAITTEM 327
>UniRef50_A1C1A8 Cluster: Apocytochrome b; n=88; Magnoliophyta|Rep:
Apocytochrome b - Doryphora sassafras
Length = 347
Score = 93.1 bits (221), Expect = 5e-18
Identities = 62/156 (39%), Positives = 74/156 (47%)
Frame = -2
Query: 536 GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXX 357
GQ+SFWG + AI +G V GF+VD TL +
Sbjct: 129 GQMSFWGXXXXXSXXXAIXXVGDTXVTXXXXGFSVDXXTLNXXXSLHHXLPLILVGASLL 188
Query: 356 XXXXXHQTGSNNPLGLNRNLDKIPFHPFFTFKDXXXXXXXXXXXXXXXXINPYLLGDPDN 177
HQ GSNNPLG++ +DKI +P+F KD G PDN
Sbjct: 189 HLAALHQYGSNNPLGVHSEMDKIAPYPYFYVKDLVGRVASAIFSSXXXXXXXXXXGHPDN 248
Query: 176 FTPANPLVTPVHIQPE*YFLXAYAILRSIPNKLGGV 69
N TP HI PE YFL +AILRSIP+K GGV
Sbjct: 249 XXXXNXXPTPPHIVPEWYFLPIHAILRSIPDKSGGV 284
>UniRef50_O47901 Cluster: Cytochrome b; n=17; Euteleostomi|Rep:
Cytochrome b - Leuciscus carolitertii
Length = 345
Score = 88.2 bits (209), Expect = 1e-16
Identities = 40/46 (86%), Positives = 42/46 (91%)
Frame = -2
Query: 206 NPYLLGDPDNFTPANPLVTPVHIQPE*YFLXAYAILRSIPNKLGGV 69
+P LLGDP+NFTPANPLVTP HIQPE YFL AYAILRSIPNKLGGV
Sbjct: 211 SPNLLGDPENFTPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGV 256
Score = 79.8 bits (188), Expect = 5e-14
Identities = 37/49 (75%), Positives = 42/49 (85%)
Frame = -2
Query: 551 YVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFY 405
YVLP GQ+SFWGATVITNLLSA+PY+G LV I GGF+VD ATLTRF+
Sbjct: 131 YVLPWGQMSFWGATVITNLLSAVPYMGDTLVQWIWGGFSVDXATLTRFF 179
>UniRef50_Q8SHP6 Cluster: Apocytochrome B; n=1; Hypocrea
jecorina|Rep: Apocytochrome B - Trichoderma reesei
(Hypocrea jecorina)
Length = 427
Score = 87.8 bits (208), Expect = 2e-16
Identities = 51/124 (41%), Positives = 63/124 (50%), Gaps = 1/124 (0%)
Frame = -2
Query: 437 AVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXHQT-GSNNPLGLNRNLDKIPFHPFFTFK 261
+V+NATL RF+ H T G++NPLG+ D+IPF P+F FK
Sbjct: 208 SVNNATLNRFFALHFVLPFVLAALALMHLIAVHDTAGASNPLGVPGYYDRIPFAPYFLFK 267
Query: 260 DXXXXXXXXXXXXXXXXINPYLLGDPDNFTPANPLVTPVHIQPE*YFLXAYAILRSIPNK 81
D P +LGD +N+ ANP+ TP I PE Y L YAILRSIPNK
Sbjct: 268 DLVTIFIFLFGLSLFVFFMPNVLGDSENYVMANPMQTPAAIVPEWYLLPFYAILRSIPNK 327
Query: 80 LGGV 69
L GV
Sbjct: 328 LLGV 331
Score = 53.6 bits (123), Expect = 4e-06
Identities = 24/37 (64%), Positives = 30/37 (81%)
Frame = -2
Query: 551 YVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GG 441
YVLP GQ+S WGATVITNL+SAIP++G +V + GG
Sbjct: 118 YVLPYGQMSLWGATVITNLISAIPWIGQDIVEFVWGG 154
>UniRef50_P03879 Cluster: Intron-encoded RNA maturase bI4 precursor
(RNA maturase SCbI4) [Contains: Truncated, nonfunctional
cytochrome b; RNA maturase bI4 (EC 3.1.-.-)]; n=18;
Fungi/Metazoa group|Rep: Intron-encoded RNA maturase bI4
precursor (RNA maturase SCbI4) [Contains: Truncated,
nonfunctional cytochrome b; RNA maturase bI4 (EC
3.1.-.-)] - Saccharomyces cerevisiae (Baker's yeast)
Length = 638
Score = 87.8 bits (208), Expect = 2e-16
Identities = 43/93 (46%), Positives = 56/93 (60%)
Frame = -2
Query: 536 GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXX 357
GQ+S WGATVITNL SAIP++G +V+ + GGF+V N T+ RF+
Sbjct: 137 GQMSHWGATVITNLFSAIPFVGNDIVSWLWGGFSVSNPTIQRFFALHYLVPFIIAAMVIM 196
Query: 356 XXXXXHQTGSNNPLGLNRNLDKIPFHPFFTFKD 258
H GS+NPLG+ NLD+IP H +F FKD
Sbjct: 197 HLMALHIHGSSNPLGITGNLDRIPMHSYFIFKD 229
>UniRef50_Q9PEW9 Cluster: Ubiquinol cytochrome C oxidoreductase,
cytochrome B subunit; n=20; cellular organisms|Rep:
Ubiquinol cytochrome C oxidoreductase, cytochrome B
subunit - Xylella fastidiosa
Length = 420
Score = 87.4 bits (207), Expect = 2e-16
Identities = 60/178 (33%), Positives = 80/178 (44%), Gaps = 17/178 (9%)
Frame = -2
Query: 551 YVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXX 372
YVLP GQ+SFWGA VI +L AIP +G L I G + + TL RF+
Sbjct: 147 YVLPWGQVSFWGAKVIISLFGAIPVIGNGLDEWIMGDYLPSDVTLNRFFALHVIALPLLL 206
Query: 371 XXXXXXXXXXHQ-TGSNNPLGLN-------------RNLDKIPFHPFFTFKDXXXXXXXX 234
+ GSNNP G++ ++ D IPFHP++T K+
Sbjct: 207 GFLVVLHLVALRGVGSNNPDGIDIHQGPKGNRWDSMQSADSIPFHPYYTLKEMVAVCVLL 266
Query: 233 XXXXXXXXINPYLLG---DPDNFTPANPLVTPVHIQPE*YFLXAYAILRSIPNKLGGV 69
P G + NF ANPL+TP ++P YF YA+LR +P K GV
Sbjct: 267 LLAAFVIFFAPEFGGLFLEYGNFVEANPLMTPEDMKPVWYFAPYYAMLRLVPGKSVGV 324
>UniRef50_A0EXD5 Cluster: Cytochrome b; n=21; Otophysi|Rep:
Cytochrome b - Clarias liocephalus
Length = 373
Score = 83.0 bits (196), Expect = 5e-15
Identities = 38/49 (77%), Positives = 43/49 (87%)
Frame = -2
Query: 551 YVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFY 405
YVLP GQ+SFWGATVITNLLSA+PY+G LV I GGF+VDNATLTRF+
Sbjct: 127 YVLPWGQMSFWGATVITNLLSAVPYMGNALVQWIWGGFSVDNATLTRFF 175
Score = 83.0 bits (196), Expect = 5e-15
Identities = 38/49 (77%), Positives = 43/49 (87%)
Frame = -2
Query: 551 YVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFY 405
YVLP GQ+SFWGATVITNLLSA+PY+G LV I GGF+VDNATLTRF+
Sbjct: 314 YVLPWGQMSFWGATVITNLLSAVPYMGNALVQWIWGGFSVDNATLTRFF 362
>UniRef50_Q9TAE6 Cluster: Cytochrome b; n=1; Anniella
geronimensis|Rep: Cytochrome b - Anniella geronimensis
Length = 262
Score = 81.0 bits (191), Expect = 2e-14
Identities = 37/50 (74%), Positives = 43/50 (86%)
Frame = -2
Query: 551 YVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYT 402
YVLP GQ+SFWGATVITNL SA+PY+G LV+ GGFA+DNATLTRF+T
Sbjct: 88 YVLPWGQMSFWGATVITNLSSALPYIGPTLVHWTWGGFAIDNATLTRFFT 137
Score = 64.5 bits (150), Expect = 2e-09
Identities = 28/34 (82%), Positives = 31/34 (91%)
Frame = -2
Query: 170 PANPLVTPVHIQPE*YFLXAYAILRSIPNKLGGV 69
PANPL+TP HI+PE YFL AYAILRSIPNK+GGV
Sbjct: 148 PANPLITPPHIKPEWYFLFAYAILRSIPNKIGGV 181
>UniRef50_Q74CM4 Cluster: Cytochrome b/b6; n=4; Geobacter|Rep:
Cytochrome b/b6 - Geobacter sulfurreducens
Length = 367
Score = 81.0 bits (191), Expect = 2e-14
Identities = 58/177 (32%), Positives = 73/177 (41%), Gaps = 16/177 (9%)
Frame = -2
Query: 551 YVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXX 372
Y+LP Q+SFW TV TN AIP +G LV + GG V TL RF+
Sbjct: 140 YLLPWSQLSFWATTVATNSAGAIPVIGGYLVEFLRGGKLVGPPTLGRFFAVHVALLPLLI 199
Query: 371 XXXXXXXXXXHQT--GSNNPLGL--------------NRNLDKIPFHPFFTFKDXXXXXX 240
+ S P GL + D IPF+P + +D
Sbjct: 200 AALIGAHLFLLERIGVSAPPFGLANTRTRWAGDRFRHESHPDGIPFYPTYLLQDATSIFI 259
Query: 239 XXXXXXXXXXINPYLLGDPDNFTPANPLVTPVHIQPE*YFLXAYAILRSIPNKLGGV 69
NPYL P F PA+P TP HI+PE YFL Y L+ PN+L G+
Sbjct: 260 YLALFFGVVFFNPYLFFPPTAFIPADPFKTPPHIKPEWYFLANYQTLKVFPNELLGL 316
>UniRef50_A6Q5D2 Cluster: Ubiquinol cytochrome c oxidoreductase,
cytochrome b subunit; n=26; Epsilonproteobacteria|Rep:
Ubiquinol cytochrome c oxidoreductase, cytochrome b
subunit - Nitratiruptor sp. (strain SB155-2)
Length = 465
Score = 80.2 bits (189), Expect = 4e-14
Identities = 58/168 (34%), Positives = 71/168 (42%), Gaps = 16/168 (9%)
Frame = -2
Query: 551 YVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXX 372
Y+LP GQ+S+W A VITNL IP++G LV I G F V + TLTRF+
Sbjct: 144 YMLPWGQMSYWAAQVITNLFGGIPFIGDDLVVWIRGNFYVSDPTLTRFFMLHVLLMPLII 203
Query: 371 XXXXXXXXXXHQTGS-NNPLG---------------LNRNLDKIPFHPFFTFKDXXXXXX 240
+ NN G L + IPF P F KD
Sbjct: 204 MAIIGLHFYTLRIPHVNNQDGEEIDFDAEAEKYKAGLKKESKVIPFWPVFLSKDFFVLGV 263
Query: 239 XXXXXXXXXXINPYLLGDPDNFTPANPLVTPVHIQPE*YFLXAYAILR 96
+ DP NF PANP+ TP HI PE YFL +Y +LR
Sbjct: 264 FMIFYFYLVFYHYDFAMDPINFDPANPMKTPPHIYPEWYFLWSYEVLR 311
>UniRef50_Q8M833 Cluster: Cytochrome b; n=1; Microstomum
lineare|Rep: Cytochrome b - Microstomum lineare
Length = 234
Score = 79.8 bits (188), Expect = 5e-14
Identities = 53/148 (35%), Positives = 68/148 (45%)
Frame = -2
Query: 512 TVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXHQT 333
+V TN LS +PYLG L+ I GG V ++ RF++ H +
Sbjct: 3 SVXTNFLSTLPYLGVFLLYSIWGGLNVCEISVYRFFSLHFIMPFVLVVLSIIHMAMLHVS 62
Query: 332 GSNNPLGLNRNLDKIPFHPFFTFKDXXXXXXXXXXXXXXXXINPYLLGDPDNFTPANPLV 153
S+NPL +N N D + F P+F KD PYL D NF A+
Sbjct: 63 VSSNPLHIN-NKDFLSFFPYFWSKDIVGFFLMFIFVLWLLTFFPYLFCDAANFMEASFSE 121
Query: 152 TPVHIQPE*YFLXAYAILRSIPNKLGGV 69
TP HI+PE YFL YAILR+ K GV
Sbjct: 122 TPEHIKPEWYFLPFYAILRAFATKSSGV 149
>UniRef50_A3QRH7 Cluster: Cytochrome b; n=1; Microcotyle
sebastis|Rep: Cytochrome b - Microcotyle sebastis
Length = 386
Score = 79.0 bits (186), Expect = 8e-14
Identities = 48/162 (29%), Positives = 75/162 (46%), Gaps = 1/162 (0%)
Frame = -2
Query: 551 YVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXX 372
Y+LP Q+S+W VI+ + ++P +G L + + G + + +R +
Sbjct: 144 YLLPWHQMSYWAGVVISTIFLSLPVIGPHLYSFLLGSYDFGDGIXSRVFCVHVCFGFVII 203
Query: 371 XXXXXXXXXXHQTGSNNPLGLNRNL-DKIPFHPFFTFKDXXXXXXXXXXXXXXXXINPYL 195
H+ GS+N + D I FH + +KD +P+
Sbjct: 204 ALIVLHLVNLHKIGSSNSFNSGDSYSDVIFFHXGYGYKDVLLFLSVXLVTLLFSCYSPWF 263
Query: 194 LGDPDNFTPANPLVTPVHIQPE*YFLXAYAILRSIPNKLGGV 69
+NF NPL TP +I+PE YFL YA+LRSI NK+GG+
Sbjct: 264 TSLKENFITPNPLATPXNIKPEWYFLPFYALLRSIENKIGGL 305
>UniRef50_Q9KIW3 Cluster: Putative cytochrome b precursor; n=7;
Acidithiobacillus ferrooxidans|Rep: Putative cytochrome
b precursor - Thiobacillus ferrooxidans
(Acidithiobacillus ferrooxidans)
Length = 402
Score = 78.6 bits (185), Expect = 1e-13
Identities = 53/174 (30%), Positives = 78/174 (44%), Gaps = 13/174 (7%)
Frame = -2
Query: 551 YVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYT-XXXXXXXXX 375
YVLP G +S+W VIT+++ A+P +G L GG + +ATL R
Sbjct: 137 YVLPFGNLSYWAGEVITSIMHALPVVGPSLTTLTRGGPGIGSATLQRLLALHVVLFFLII 196
Query: 374 XXXXXXXXXXXHQTGSNNPLGLN---------RNLDKIPFHPFFTFKDXXXXXXXXXXXX 222
H+ GSNNP G++ + LD +PFHP++T KD
Sbjct: 197 LAAIALHIVALHRVGSNNPDGIDIKKHKGPDGKPLDGVPFHPYYTVKDLFGVGVWLTIFV 256
Query: 221 XXXXINPYLLG---DPDNFTPANPLVTPVHIQPE*YFLXAYAILRSIPNKLGGV 69
P + G + F ANP+V+ + P Y YA+LR++PNK G+
Sbjct: 257 SVIFYAPTMHGVFMERTTFLAANPMVSLPDVTPPWYLSPYYAMLRAVPNKYYGI 310
>UniRef50_O66459 Cluster: Cytochrome b; n=2; Aquifex aeolicus|Rep:
Cytochrome b - Aquifex aeolicus
Length = 409
Score = 78.2 bits (184), Expect = 1e-13
Identities = 58/176 (32%), Positives = 78/176 (44%), Gaps = 16/176 (9%)
Frame = -2
Query: 551 YVLP*GQISFWGATVITNL---LSAIPYLGTI-------LVN*I*GGFAVDNATLTR-FY 405
Y+LP GQ+S+WG V T + L+ P L I +V + GG+ V + TL R F
Sbjct: 140 YLLPWGQLSYWGFIVTTEIPGSLADAPILKPIFKAIAETIVLWMKGGYVVTDVTLGRVFG 199
Query: 404 TXXXXXXXXXXXXXXXXXXXXHQTGSNNPLGLN----RNLDK-IPFHPFFTFKDXXXXXX 240
+ G +NP G+ +N DK +PFHP+ T K+
Sbjct: 200 SHVLIYPLILLALVGIHLYLVRAAGISNPEGIEYDKKKNPDKFVPFHPYMTLKEGAYVMW 259
Query: 239 XXXXXXXXXXINPYLLGDPDNFTPANPLVTPVHIQPE*YFLXAYAILRSIPNKLGG 72
+ P+NF PANPL TP HI PE Y L Y + RSIP+K G
Sbjct: 260 YLAVFFFFVFFHISHFLPPENFEPANPLKTPAHIAPEWYLLGYYEVFRSIPSKFWG 315
>UniRef50_Q5DKX9 Cluster: Cytochrome b; n=8; Pseudococcidae|Rep:
Cytochrome b - Antonina pretiosa
Length = 211
Score = 75.4 bits (177), Expect = 1e-12
Identities = 38/87 (43%), Positives = 48/87 (55%)
Frame = -2
Query: 329 SNNPLGLNRNLDKIPFHPFFTFKDXXXXXXXXXXXXXXXXINPYLLGDPDNFTPANPLVT 150
S+NPLG+N N+D I +P+ KD P LL + DNF N +T
Sbjct: 38 SSNPLGMNNNIDLITLNPYSIMKDMIMLILNMMMFLNLNFYLPMLLNNFDNFNEMNYFIT 97
Query: 149 PVHIQPE*YFLXAYAILRSIPNKLGGV 69
P HI+PE YFL Y+ILRSI NKL G+
Sbjct: 98 PNHIEPEWYFLFFYSILRSINNKLSGL 124
>UniRef50_UPI00015C5733 Cluster: hypothetical protein CKO_01262;
n=1; Citrobacter koseri ATCC BAA-895|Rep: hypothetical
protein CKO_01262 - Citrobacter koseri ATCC BAA-895
Length = 390
Score = 74.1 bits (174), Expect = 2e-12
Identities = 51/163 (31%), Positives = 66/163 (40%), Gaps = 2/163 (1%)
Frame = -2
Query: 551 YVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXX 372
Y L GQ S+W ATVIT AIP++G L + + GG+A TL RFY
Sbjct: 131 YSLIWGQKSYWAATVITGFTRAIPWVGDTLYSFLVGGYAPGTPTLGRFYVLHFIIPFVIV 190
Query: 371 XXXXXXXXXXHQTGSN--NPLGLNRNLDKIPFHPFFTFKDXXXXXXXXXXXXXXXXINPY 198
+ K+ F T D P+
Sbjct: 191 GGTIWHIRTVQSAFAQAMKKTFTQSESRKLFFDYKITDSDAIKLTLFMMLFAWFLFFAPH 250
Query: 197 LLGDPDNFTPANPLVTPVHIQPE*YFLXAYAILRSIPNKLGGV 69
L DNF PA+P VTP + PE YFL ++ILR PN+L G+
Sbjct: 251 YLSSADNFIPADPTVTPAVVAPEWYFLPFFSILRCFPNELLGI 293
>UniRef50_Q36099 Cluster: Cytochrome b; n=12; Piroplasmida|Rep:
Cytochrome b - Theileria parva
Length = 363
Score = 73.3 bits (172), Expect = 4e-12
Identities = 54/163 (33%), Positives = 68/163 (41%), Gaps = 2/163 (1%)
Frame = -2
Query: 551 YVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXX 372
YVLP GQ+SFWGATVI+NLL I GGF V TL RF+
Sbjct: 121 YVLPDGQMSFWGATVISNLLEWFGKAKVITF----GGFTVGPETLKRFFILHFVLPAVVL 176
Query: 371 XXXXXXXXXXHQTGSNNPLGLNRNLDKIPFHPFFTFKDXXXXXXXXXXXXXXXXINPYLL 192
H+ GS+NPL L + + F+ F D + L
Sbjct: 177 VIVLLHLYFLHREGSSNPLTLAEAVALLKFYQLILFSDVKFLVIISMFIGPQVGYGIWTL 236
Query: 191 --GDPDNFTPANPLVTPVHIQPE*YFLXAYAILRSIPNKLGGV 69
D DN ++ TP HI PE Y L YA L+ P K+ G+
Sbjct: 237 FQADNDNSILSSSENTPAHIIPEWYLLLFYATLKVFPTKVSGL 279
>UniRef50_O21345 Cluster: Apocytochrome b; n=1; Euhadra
herklotsi|Rep: Apocytochrome b - Euhadra herklotsi
Length = 139
Score = 72.1 bits (169), Expect = 9e-12
Identities = 31/45 (68%), Positives = 37/45 (82%)
Frame = -2
Query: 203 PYLLGDPDNFTPANPLVTPVHIQPE*YFLXAYAILRSIPNKLGGV 69
P + DP+NF AN +VTP+HIQPE YFL AYAILRS+P+KLGGV
Sbjct: 9 PNMFTDPENFLEANSMVTPIHIQPEWYFLFAYAILRSVPSKLGGV 53
>UniRef50_A7QK39 Cluster: Chromosome chr16 scaffold_110, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr16 scaffold_110, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 184
Score = 70.5 bits (165), Expect = 3e-11
Identities = 51/147 (34%), Positives = 68/147 (46%)
Frame = -2
Query: 530 ISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXX 351
+SFWGAT T + Y + + G F D ATL F++
Sbjct: 1 MSFWGATHHTY---SRRYHNDLAL----GWFLYD-ATLNYFFSLHHLLSFVLVGDILFHL 52
Query: 350 XXXHQTGSNNPLGLNRNLDKIPFHPFFTFKDXXXXXXXXXXXXXXXXINPYLLGDPDNFT 171
HQ GSNNPLG++ LDKI F+P+ K+ P +LG +N+
Sbjct: 53 VALHQYGSNNPLGVHLELDKISFYPYCFVKNLVGQVAYVIFSFIWIFYAPNVLGHLNNYI 112
Query: 170 PANPLVTPVHIQPE*YFLXAYAILRSI 90
P N ++TP HI PE YFL +AIL SI
Sbjct: 113 PTNLMLTPPHIMPEWYFLPIHAILPSI 139
>UniRef50_A1BQ48 Cluster: Cytochrome b; n=105; Clupeocephala|Rep:
Cytochrome b - Priapella chamulae
Length = 256
Score = 65.7 bits (153), Expect = 8e-10
Identities = 30/34 (88%), Positives = 31/34 (91%)
Frame = -2
Query: 170 PANPLVTPVHIQPE*YFLXAYAILRSIPNKLGGV 69
PANPLVTP HI+PE YFL AYAILRSIPNKLGGV
Sbjct: 135 PANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGV 168
>UniRef50_Q1HTY1 Cluster: Cytochrome oxidase B; n=2; Pyuridae|Rep:
Cytochrome oxidase B - Pyura haustor
Length = 137
Score = 65.3 bits (152), Expect = 1e-09
Identities = 45/127 (35%), Positives = 55/127 (43%), Gaps = 5/127 (3%)
Frame = -2
Query: 524 FWGA-----TVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXX 360
FWG +VI NLL+ IP++G VN GGF V ATLTRFYT
Sbjct: 2 FWGQGGFEESVIPNLLNPIPFIGGDTVNWAWGGFFVGGATLTRFYTFHFLFPFILVVLSM 61
Query: 359 XXXXXXHQTGSNNPLGLNRNLDKIPFHPFFTFKDXXXXXXXXXXXXXXXXINPYLLGDPD 180
H+ GS+NPL N K+ F P+ KD P LL DP+
Sbjct: 62 LHLVFLHEGGSSNPLKGTNNSFKVWFWPYNGVKDMFGLLFILIGLVFVVFFFPNLLTDPE 121
Query: 179 NFTPANP 159
N+ NP
Sbjct: 122 NYMSENP 128
>UniRef50_Q76CU5 Cluster: Cytochrome b; n=1; Galaxea
fascicularis|Rep: Cytochrome b - Galaxea fascicularis
Length = 137
Score = 62.1 bits (144), Expect = 1e-08
Identities = 29/33 (87%), Positives = 29/33 (87%)
Frame = -2
Query: 167 ANPLVTPVHIQPE*YFLXAYAILRSIPNKLGGV 69
AN LVTPVHIQPE YFL AYAILRSIPNK GGV
Sbjct: 8 ANSLVTPVHIQPEWYFLFAYAILRSIPNKFGGV 40
>UniRef50_A4Z9W1 Cluster: Cytochrome b; n=9; Colubroidea|Rep:
Cytochrome b - Hemirhagerrhis hildebrandtii
Length = 366
Score = 56.8 bits (131), Expect = 4e-07
Identities = 26/37 (70%), Positives = 30/37 (81%)
Frame = -2
Query: 551 YVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GG 441
YVLP GQ+SFW ATVITNLL+AIPYLGT + + GG
Sbjct: 123 YVLPWGQMSFWAATVITNLLTAIPYLGTTMTXWLWGG 159
>UniRef50_P03880 Cluster: Intron-encoded DNA endonuclease I-AniI
precursor (mRNA maturase bI1) (COB intron protein)
[Contains: Truncated non-functional cytochrome b; DNA
endonuclease/RNA maturase I-AniI (EC 3.1.-.-)]; n=23;
Fungi/Metazoa group|Rep: Intron-encoded DNA endonuclease
I-AniI precursor (mRNA maturase bI1) (COB intron
protein) [Contains: Truncated non-functional cytochrome
b; DNA endonuclease/RNA maturase I-AniI (EC 3.1.-.-)] -
Emericella nidulans (Aspergillus nidulans)
Length = 488
Score = 55.6 bits (128), Expect = 9e-07
Identities = 26/41 (63%), Positives = 31/41 (75%)
Frame = -2
Query: 551 YVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVD 429
YVLP GQ+S WGATVITNL+SAIP++G +V I GG D
Sbjct: 132 YVLPYGQMSLWGATVITNLMSAIPWIGQDIVEFIWGGLYTD 172
>UniRef50_Q9ZZW7 Cluster: Cytochrome b mRNA maturase bI3; n=1;
Saccharomyces cerevisiae|Rep: Cytochrome b mRNA maturase
bI3 - Saccharomyces cerevisiae (Baker's yeast)
Length = 517
Score = 48.8 bits (111), Expect = 1e-04
Identities = 21/37 (56%), Positives = 30/37 (81%)
Frame = -2
Query: 536 GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDN 426
GQ+S WGATVITNL SAIP++G +V+ + GGF +++
Sbjct: 137 GQMSHWGATVITNLFSAIPFVGNDIVSWLWGGFNMED 173
>UniRef50_P81376 Cluster: Cytochrome b; n=1; Plasmodium
gallinaceum|Rep: Cytochrome b - Plasmodium gallinaceum
Length = 300
Score = 47.6 bits (108), Expect = 2e-04
Identities = 21/42 (50%), Positives = 27/42 (64%)
Frame = -2
Query: 194 LGDPDNFTPANPLVTPVHIQPE*YFLXAYAILRSIPNKLGGV 69
L PDN + TP+HI PE YFL YA+L++IPNK G+
Sbjct: 189 LSHPDNAITVDRYATPLHIVPEWYFLPFYAMLKTIPNKTAGL 230
Score = 41.5 bits (93), Expect = 0.015
Identities = 26/50 (52%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Frame = -2
Query: 551 YVLP*GQISFWGATVITNLLSAIPYL-GTILVN*I*GGFAVDNATLTRFY 405
YVLP GQ+SFW TVITNLL YL T ++ GG+ V + TL RF+
Sbjct: 126 YVLPWGQMSFWNTTVITNLL----YLFRTCFMD--CGGYLVSDPTLKRFF 169
>UniRef50_A7H6W4 Cluster: Cytochrome b/b6 domain; n=2;
Anaeromyxobacter|Rep: Cytochrome b/b6 domain -
Anaeromyxobacter sp. Fw109-5
Length = 448
Score = 47.2 bits (107), Expect = 3e-04
Identities = 21/49 (42%), Positives = 31/49 (63%)
Frame = -2
Query: 551 YVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFY 405
Y+LP Q+++W TV TN+ SA+P +G + + GG +D TL RFY
Sbjct: 169 YLLPWDQLAYWAVTVGTNIASAVPLVGAEVRELLLGGRNIDQPTLIRFY 217
>UniRef50_Q4XXN6 Cluster: Putative uncharacterized protein; n=1;
Plasmodium chabaudi|Rep: Putative uncharacterized
protein - Plasmodium chabaudi
Length = 329
Score = 47.2 bits (107), Expect = 3e-04
Identities = 21/26 (80%), Positives = 23/26 (88%)
Frame = -2
Query: 551 YVLP*GQISFWGATVITNLLSAIPYL 474
YVLP GQ+S+WGATVITNLLS IP L
Sbjct: 292 YVLPWGQMSYWGATVITNLLSGIPAL 317
>UniRef50_Q9L597 Cluster: Subunit IV; n=2; Heliobacteriaceae|Rep:
Subunit IV - Heliobacterium gestii
Length = 133
Score = 46.8 bits (106), Expect = 4e-04
Identities = 19/34 (55%), Positives = 26/34 (76%)
Frame = -2
Query: 170 PANPLVTPVHIQPE*YFLXAYAILRSIPNKLGGV 69
PA+ LVTP+ ++PE Y+L AY IL +PNKL G+
Sbjct: 45 PADKLVTPIGLKPEWYYLWAYVILEKVPNKLMGI 78
>UniRef50_P56773 Cluster: Cytochrome b6; n=298; cellular
organisms|Rep: Cytochrome b6 - Arabidopsis thaliana
(Mouse-ear cress)
Length = 215
Score = 46.8 bits (106), Expect = 4e-04
Identities = 21/50 (42%), Positives = 31/50 (62%)
Frame = -2
Query: 551 YVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYT 402
Y LP QI +W ++T + AIP +G+ LV + G +V +TLTRFY+
Sbjct: 136 YSLPWDQIGYWAVKIVTGVPDAIPVIGSPLVELLRGSASVGQSTLTRFYS 185
>UniRef50_Q1EN74 Cluster: Cytochrome b; n=2; Heligmosomoides
polygyrus|Rep: Cytochrome b - Heligmosomoides polygyrus
Length = 211
Score = 45.6 bits (103), Expect = 0.001
Identities = 35/105 (33%), Positives = 47/105 (44%)
Frame = -2
Query: 443 GFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXHQTGSNNPLGLNRNLDKIPFHPFFTF 264
GF V +ATL F+ H TGS + + + D I F P +
Sbjct: 107 GFGVSSATLKFFFVXHFLVPWGLLLXVMFHXIFXHSTGSTSSMYCXGDYDXICFGPDYWN 166
Query: 263 KDXXXXXXXXXXXXXXXXINPYLLGDPDNFTPANPLVTPVHIQPE 129
KD P+ LGDP+ F A+P+++PVHI PE
Sbjct: 167 KDMYNLIFWFLFLGFSLFY-PFSLGDPEMFIEADPMMSPVHIVPE 210
>UniRef50_Q4AEZ5 Cluster: Cytochrome b/b6, N-terminal; n=1;
Chlorobium phaeobacteroides BS1|Rep: Cytochrome b/b6,
N-terminal - Chlorobium phaeobacteroides BS1
Length = 333
Score = 44.8 bits (101), Expect = 0.002
Identities = 20/49 (40%), Positives = 31/49 (63%)
Frame = -2
Query: 551 YVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFY 405
Y+LP Q+S+W T++TN+L +P +G L + GG V+ TL+ FY
Sbjct: 45 YLLPWDQLSYWAVTIMTNILEYLPLVGNNLAIIVRGGEYVNGNTLSIFY 93
>UniRef50_P56774 Cluster: Cytochrome b6-f complex subunit 4; n=247;
cellular organisms|Rep: Cytochrome b6-f complex subunit
4 - Arabidopsis thaliana (Mouse-ear cress)
Length = 160
Score = 44.8 bits (101), Expect = 0.002
Identities = 19/34 (55%), Positives = 24/34 (70%)
Frame = -2
Query: 170 PANPLVTPVHIQPE*YFLXAYAILRSIPNKLGGV 69
PA+P TP+ I PE YF + ILR++PNKL GV
Sbjct: 65 PADPFATPLEILPEWYFFPVFQILRTVPNKLLGV 98
>UniRef50_Q9GM37 Cluster: Putative uncharacterized protein; n=1;
Macaca fascicularis|Rep: Putative uncharacterized
protein - Macaca fascicularis (Crab eating macaque)
(Cynomolgus monkey)
Length = 115
Score = 44.0 bits (99), Expect = 0.003
Identities = 19/42 (45%), Positives = 26/42 (61%)
Frame = -1
Query: 594 NYNFIYTNSNCFHRLCLTLRSNIFLGGNRNYKSIICNPLFRN 469
+Y Y ++N FH L +R NI LG N N+K I NP++RN
Sbjct: 74 HYTPSYNHNNSFHGLRSPMRPNIILGSNSNHKPTISNPVYRN 115
>UniRef50_Q18UP2 Cluster: Putative uncharacterized protein; n=2;
Desulfitobacterium hafniense|Rep: Putative
uncharacterized protein - Desulfitobacterium hafniense
(strain DCB-2)
Length = 131
Score = 43.2 bits (97), Expect = 0.005
Identities = 15/32 (46%), Positives = 24/32 (75%)
Frame = -2
Query: 170 PANPLVTPVHIQPE*YFLXAYAILRSIPNKLG 75
PANP++TP HI+P+ YF+ + +L+ +P LG
Sbjct: 48 PANPVMTPAHIEPDWYFMWLFGLLKIVPQLLG 79
>UniRef50_Q3LHR7 Cluster: Cytochrome b; n=1; Trichosporon
domesticum|Rep: Cytochrome b - Trichosporon domesticum
Length = 132
Score = 42.7 bits (96), Expect = 0.007
Identities = 15/25 (60%), Positives = 21/25 (84%)
Frame = -2
Query: 332 GSNNPLGLNRNLDKIPFHPFFTFKD 258
GS+NPLG++ N D+IP HP++ FKD
Sbjct: 2 GSSNPLGISSNSDRIPMHPYYMFKD 26
Score = 41.9 bits (94), Expect = 0.011
Identities = 18/33 (54%), Positives = 26/33 (78%)
Frame = -2
Query: 500 NLLSAIPYLGTILVN*I*GGFAVDNATLTRFYT 402
N+LSAIP++G V + GGF+V+NATL RF++
Sbjct: 28 NMLSAIPWIGQDFVEFVWGGFSVNNATLNRFFS 60
Score = 38.7 bits (86), Expect = 0.11
Identities = 17/33 (51%), Positives = 20/33 (60%)
Frame = -2
Query: 203 PYLLGDPDNFTPANPLVTPVHIQPE*YFLXAYA 105
P +G DN+ PANP+ TP I PE Y L YA
Sbjct: 100 PNAMGHSDNYIPANPMQTPPSIVPEWYLLPYYA 132
>UniRef50_Q7M2D6 Cluster: Ubiquinol-cytochrome-c reductase (EC
1.10.2.2) cytochrome b; n=2; Leishmania amazonensis|Rep:
Ubiquinol-cytochrome-c reductase (EC 1.10.2.2)
cytochrome b - Leishmania amazonensis
Length = 250
Score = 42.3 bits (95), Expect = 0.009
Identities = 19/49 (38%), Positives = 31/49 (63%)
Frame = -2
Query: 551 YVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFY 405
YVLP +S+WG TV +N+L+ +P +GT L I G +++ TL + +
Sbjct: 104 YVLPCTMMSYWGLTVFSNILATVPVIGTWLCYWIWGSEYINDFTLLKLH 152
>UniRef50_Q3YFJ1 Cluster: Cytochrome b; n=27; Coelomata|Rep:
Cytochrome b - Laonastes aenigmamus (Laotian rock rat)
Length = 378
Score = 40.3 bits (90), Expect = 0.035
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = -2
Query: 125 YFLXAYAILRSIPNKLGGV 69
YFL AYAILRSIPNKLGGV
Sbjct: 273 YFLFAYAILRSIPNKLGGV 291
>UniRef50_A3ZQU1 Cluster: Menaquinol-cytochrome-c reductase
cytochrome b subunit; n=1; Blastopirellula marina DSM
3645|Rep: Menaquinol-cytochrome-c reductase cytochrome b
subunit - Blastopirellula marina DSM 3645
Length = 639
Score = 40.3 bits (90), Expect = 0.035
Identities = 20/49 (40%), Positives = 27/49 (55%)
Frame = -2
Query: 551 YVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFY 405
Y+LP Q +W V T L+ IP +G L + GG +ATLTRF+
Sbjct: 136 YLLPWDQKGYWATKVATTLMGLIPAIGGDLQKVVVGGTDYGHATLTRFF 184
>UniRef50_Q67JM0 Cluster: Menaquinol-cytochrome C reductase; n=1;
Symbiobacterium thermophilum|Rep: Menaquinol-cytochrome
C reductase - Symbiobacterium thermophilum
Length = 258
Score = 39.9 bits (89), Expect = 0.046
Identities = 17/50 (34%), Positives = 29/50 (58%)
Frame = -2
Query: 551 YVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYT 402
Y+LP Q+++W V +N+ P +GT + + G+ + ATL R+YT
Sbjct: 158 YLLPWDQLAYWAIQVGSNMAKVTPVIGTYVQRALLDGYDIGPATLVRWYT 207
>UniRef50_A3ER63 Cluster: Cytochrome b subunit of the bc complex;
n=1; Leptospirillum sp. Group II UBA|Rep: Cytochrome b
subunit of the bc complex - Leptospirillum sp. Group II
UBA
Length = 458
Score = 39.9 bits (89), Expect = 0.046
Identities = 17/49 (34%), Positives = 30/49 (61%)
Frame = -2
Query: 551 YVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFY 405
Y+LP + ++WG V TN++ +P +G +L + I GG + TL+ F+
Sbjct: 146 YLLPWDERAYWGTIVGTNMIGLVPVVGPLLKSAIRGGSGLGALTLSHFF 194
>UniRef50_Q33568 Cluster: Cytochrome b; n=33; Kinetoplastida|Rep:
Cytochrome b - Trypanoplasma borreli
Length = 372
Score = 39.9 bits (89), Expect = 0.046
Identities = 40/168 (23%), Positives = 70/168 (41%), Gaps = 7/168 (4%)
Frame = -2
Query: 551 YVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXX 372
Y LP +S+WG TV +N+L+ IP +G + I +++ TL + ++
Sbjct: 133 YTLPCTSMSYWGLTVFSNILATIPLIGIYICQWIWCSEFINDFTLLKLHSIHIFLPFVLL 192
Query: 371 XXXXXXXXXXHQTGSNNPLGLNRNLDKIPFH--PFFTF-----KDXXXXXXXXXXXXXXX 213
H S++ L LD+ PF+ FF F +D
Sbjct: 193 FLIGAHFFVLHYFLSSDGL-----LDRFPFYYERFFFFLLYYLRDLFLIINILCFLIYYI 247
Query: 212 XINPYLLGDPDNFTPANPLVTPVHIQPE*YFLXAYAILRSIPNKLGGV 69
I + + +++ + L T I PE +FL + L+S+P+K G+
Sbjct: 248 CIYWFFVFHEESWIIVDTLKTSDKILPEWFFLSFFGFLKSVPDKFMGL 295
>UniRef50_Q8HE84 Cluster: Cytochrome b; n=1; Lyristes plebejus|Rep:
Cytochrome b - Lyristes plebejus
Length = 132
Score = 38.7 bits (86), Expect = 0.11
Identities = 19/35 (54%), Positives = 21/35 (60%)
Frame = -1
Query: 480 LFRNYISKLNLRGICCR*CYINPILHISFFITVHY 376
L YISKLNL ICC N IL +FF T+HY
Sbjct: 14 LIXEYISKLNLSWICCWQRNFNTILFTTFFNTLHY 48
Score = 35.1 bits (77), Expect = 1.3
Identities = 17/39 (43%), Positives = 20/39 (51%)
Frame = -2
Query: 293 KIPFHPFFTFKDXXXXXXXXXXXXXXXXINPYLLGDPDN 177
KIPFHP+F+ KD + PYLLGDP N
Sbjct: 76 KIPFHPYFSIKD-MLGFMSAVSCFWNYLLEPYLLGDPKN 113
>UniRef50_Q9HRR2 Cluster: Cytochrome b6; n=4; Halobacteriaceae|Rep:
Cytochrome b6 - Halobacterium salinarium (Halobacterium
halobium)
Length = 270
Score = 37.5 bits (83), Expect = 0.25
Identities = 16/49 (32%), Positives = 28/49 (57%)
Frame = -2
Query: 551 YVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFY 405
Y+LP Q+++W + + +IP +G + + GGF++ ATL R Y
Sbjct: 191 YLLPWDQLAYWAGQIGVEMSLSIPLVGDWVAQLMFGGFSLGQATLQRMY 239
>UniRef50_A4A2J7 Cluster: Apocytochrome b6; n=1; Blastopirellula
marina DSM 3645|Rep: Apocytochrome b6 - Blastopirellula
marina DSM 3645
Length = 494
Score = 37.1 bits (82), Expect = 0.33
Identities = 15/42 (35%), Positives = 26/42 (61%)
Frame = -2
Query: 527 SFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYT 402
S+WG +V + +P+ G +V+ I GG + + TL+RF+T
Sbjct: 151 SYWGVSVAVSAAGRVPFAGPSIVHLILGGEYIGSETLSRFFT 192
>UniRef50_Q0LKT7 Cluster: Cytochrome b/b6-like; n=1; Herpetosiphon
aurantiacus ATCC 23779|Rep: Cytochrome b/b6-like -
Herpetosiphon aurantiacus ATCC 23779
Length = 562
Score = 36.7 bits (81), Expect = 0.43
Identities = 16/49 (32%), Positives = 27/49 (55%)
Frame = -2
Query: 551 YVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFY 405
Y+LP Q++FW T+ +++ A P +G + + GG + L RFY
Sbjct: 177 YLLPWDQLAFWAVTIGSSMADAAPGVGPAIGRLLRGGAEIGAGALLRFY 225
>UniRef50_Q01PC6 Cluster: Cytochrome b/b6, N-terminal domain; n=1;
Solibacter usitatus Ellin6076|Rep: Cytochrome b/b6,
N-terminal domain - Solibacter usitatus (strain
Ellin6076)
Length = 499
Score = 36.3 bits (80), Expect = 0.57
Identities = 16/43 (37%), Positives = 27/43 (62%)
Frame = -2
Query: 533 QISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFY 405
Q ++WG + +++S +P LG LV + GG + ATL+RF+
Sbjct: 146 QDAYWGLGIGASIVSRVPLLGPWLVTLVLGGPIIAGATLSRFF 188
>UniRef50_A6CCS1 Cluster: Cytochrome b6; n=1; Planctomyces maris DSM
8797|Rep: Cytochrome b6 - Planctomyces maris DSM 8797
Length = 665
Score = 36.3 bits (80), Expect = 0.57
Identities = 17/48 (35%), Positives = 25/48 (52%)
Frame = -2
Query: 545 LP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYT 402
LP Q +W + T + +P +G+ L + + GG N TLTR YT
Sbjct: 142 LPWDQKGYWSYQIETGIAGTMPVIGSTLRSLVVGGSEFGNLTLTRLYT 189
>UniRef50_Q7YIG0 Cluster: Cytochrome b; n=2; Otiorhynchus
scaber|Rep: Cytochrome b - Otiorhynchus scaber
Length = 94
Score = 36.3 bits (80), Expect = 0.57
Identities = 23/64 (35%), Positives = 26/64 (40%)
Frame = -2
Query: 338 QTGSNNPLGLNRNLDKIPFHPFFTFKDXXXXXXXXXXXXXXXXINPYLLGDPDNFTPANP 159
Q GS+NP G N K+P P F K P L P PA P
Sbjct: 31 QPGSSNPXGXKSNFSKLPLXPXFXLKXXVGFLGLXALXPVLPXKXPXYLXGPTXXXPAXP 90
Query: 158 LVTP 147
+ P
Sbjct: 91 XLXP 94
>UniRef50_Q18UP1 Cluster: Cytochrome b/b6-like; n=2;
Desulfitobacterium hafniense|Rep: Cytochrome b/b6-like -
Desulfitobacterium hafniense (strain DCB-2)
Length = 215
Score = 35.9 bits (79), Expect = 0.75
Identities = 17/49 (34%), Positives = 28/49 (57%)
Frame = -2
Query: 551 YVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFY 405
Y+LP Q+ +W A + T +L +IP +G L+ G + + TL RF+
Sbjct: 136 YLLPLDQVGYWAAIIGTKILGSIPIVGDQLLLLGQAGTKITDHTLMRFF 184
>UniRef50_A0LFE3 Cluster: Cytochrome b/b6, N-terminal domain; n=1;
Syntrophobacter fumaroxidans MPOB|Rep: Cytochrome b/b6,
N-terminal domain - Syntrophobacter fumaroxidans (strain
DSM 10017 / MPOB)
Length = 358
Score = 35.5 bits (78), Expect = 0.99
Identities = 17/48 (35%), Positives = 27/48 (56%)
Frame = -2
Query: 548 VLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFY 405
+LP Q +W V +++S+IP +G + + + GG TLTRFY
Sbjct: 141 LLPWDQKGYWTTQVRNSIISSIPVVGDLTLRLLQGGPRTGIVTLTRFY 188
>UniRef50_Q70LX1 Cluster: Cytochrome b; n=1; Hoplobatrachus
rugulosus|Rep: Cytochrome b - Hoplobatrachus rugulosus
Length = 112
Score = 34.3 bits (75), Expect = 2.3
Identities = 15/39 (38%), Positives = 24/39 (61%)
Frame = -1
Query: 513 NRNYKSIICNPLFRNYISKLNLRGICCR*CYINPILHIS 397
N ++KS IC P++ + +NL + CR + N ILH+S
Sbjct: 2 NSHHKSSICGPIYWHRPRPMNLGWVFCRQRHANSILHLS 40
>UniRef50_Q1ARW1 Cluster: Cytochrome b/b6-like protein; n=2;
Rubrobacter xylanophilus DSM 9941|Rep: Cytochrome
b/b6-like protein - Rubrobacter xylanophilus (strain DSM
9941 / NBRC 16129)
Length = 257
Score = 34.3 bits (75), Expect = 2.3
Identities = 18/49 (36%), Positives = 27/49 (55%)
Frame = -2
Query: 551 YVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFY 405
Y+L Q FW + V + S P+LG + + + GG V ATL+RF+
Sbjct: 148 YLLRWDQDGFWASVVGIKIGSYSPFLGPYITHFLLGGDVVGPATLSRFF 196
>UniRef50_A6GGF8 Cluster: Cytochrome b/b6-like protein; n=1;
Plesiocystis pacifica SIR-1|Rep: Cytochrome b/b6-like
protein - Plesiocystis pacifica SIR-1
Length = 587
Score = 34.3 bits (75), Expect = 2.3
Identities = 17/49 (34%), Positives = 26/49 (53%)
Frame = -2
Query: 551 YVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFY 405
Y+LP Q +W V T ++ +P G + + + GG N T+TRFY
Sbjct: 136 YLLPWDQKGYWATQVATGIMGTVPG-GEPMQHALQGGDQYGNLTITRFY 183
>UniRef50_UPI0000F2E488 Cluster: PREDICTED: similar to submaxillary
apomucin, partial; n=1; Monodelphis domestica|Rep:
PREDICTED: similar to submaxillary apomucin, partial -
Monodelphis domestica
Length = 745
Score = 33.9 bits (74), Expect = 3.0
Identities = 15/22 (68%), Positives = 16/22 (72%)
Frame = +1
Query: 484 IADNRFVITVAPQKDI*PQGKT 549
+AD R ITVAPQKDI P G T
Sbjct: 1 MADRRLAITVAPQKDICPHGNT 22
>UniRef50_Q9ZGG0 Cluster: Cytochrome b6; n=3; Heliobacteriaceae|Rep:
Cytochrome b6 - Heliobacillus mobilis
Length = 213
Score = 33.9 bits (74), Expect = 3.0
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = -2
Query: 551 YVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFY 405
Y+LP Q+S+W + + ++P +G + + GG V L+RFY
Sbjct: 134 YLLPYEQLSYWASVIGAETAGSLPVVGATMKIMMQGGIKVTAEMLSRFY 182
>UniRef50_Q021B1 Cluster: Cytochrome b/b6, N-terminal domain; n=4;
Bacteria|Rep: Cytochrome b/b6, N-terminal domain -
Solibacter usitatus (strain Ellin6076)
Length = 438
Score = 33.5 bits (73), Expect = 4.0
Identities = 17/49 (34%), Positives = 25/49 (51%)
Frame = -2
Query: 551 YVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFY 405
Y+LP Q++FW TV T++ P +G + + G V L RFY
Sbjct: 172 YLLPWDQLAFWAITVGTSIAGYAPVVGQDIKFLLLGDATVGQEALLRFY 220
>UniRef50_Q01YB7 Cluster: Cytochrome b/b6, N-terminal domain; n=6;
Bacteria|Rep: Cytochrome b/b6, N-terminal domain -
Solibacter usitatus (strain Ellin6076)
Length = 281
Score = 33.5 bits (73), Expect = 4.0
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = -2
Query: 551 YVLP*GQISFWGATVITNLLSAIPYLG 471
Y+LP Q+ FW TV TN+ A P LG
Sbjct: 173 YLLPDDQLGFWAVTVGTNMARATPLLG 199
>UniRef50_Q01T86 Cluster: Cytochrome b/b6, N-terminal domain; n=1;
Solibacter usitatus Ellin6076|Rep: Cytochrome b/b6,
N-terminal domain - Solibacter usitatus (strain
Ellin6076)
Length = 545
Score = 33.5 bits (73), Expect = 4.0
Identities = 24/98 (24%), Positives = 36/98 (36%)
Frame = -2
Query: 551 YVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXX 372
Y+LP ++WG V T + + P +G L + G +V T RFY
Sbjct: 140 YLLPWDNRAYWGTVVATKIAAQAPVVGPYLSRLLGGEGSVGVVTFARFYGLHVLLLPPAT 199
Query: 371 XXXXXXXXXXHQTGSNNPLGLNRNLDKIPFHPFFTFKD 258
+ P+ + L K F+P FKD
Sbjct: 200 IFLVILHVFLVRKHGVAPVPGDELLPKKQFYPAQVFKD 237
>UniRef50_Q7NJG2 Cluster: Cytochrome b6; n=1; Gloeobacter
violaceus|Rep: Cytochrome b6 - Gloeobacter violaceus
Length = 217
Score = 32.3 bits (70), Expect = 9.3
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = -2
Query: 551 YVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFY 405
Y LP Q ++W + NLL+ +P LG + + G V +A++ R +
Sbjct: 141 YYLPLDQNAYWRLMIEANLLADVPVLGAAVKYFLLNGSGVSDASIARIH 189
>UniRef50_A6C5Y3 Cluster: Cytochrome b/b6-like protein; n=1;
Planctomyces maris DSM 8797|Rep: Cytochrome b/b6-like
protein - Planctomyces maris DSM 8797
Length = 478
Score = 32.3 bits (70), Expect = 9.3
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = -2
Query: 521 WGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFY 405
W TV + P +G L + I GG V +T+TRF+
Sbjct: 151 WSVTVAAEMAGRTPIIGPTLAHFILGGETVGGSTITRFF 189
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 390,671,293
Number of Sequences: 1657284
Number of extensions: 5844836
Number of successful extensions: 10006
Number of sequences better than 10.0: 104
Number of HSP's better than 10.0 without gapping: 9679
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9902
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 43562448615
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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