Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc29e19
         (686 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   1.8  
AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    23   2.3  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    23   2.3  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    23   2.3  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    22   5.4  
DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9 prot...    22   5.4  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   9.5  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 13/42 (30%), Positives = 20/42 (47%)
 Frame = +2

Query: 527 LCIQQCYNCTIILKYLLVPITTQSFAVVVCEYILCTWYIMYC 652
           LC+   Y   II    L+ +    + VV   ++LC +Y  YC
Sbjct: 111 LCVYYFYYAFIIFTVHLLFLLCIYYFVVPLFFLLCIYY-FYC 151



 Score = 21.8 bits (44), Expect = 5.4
 Identities = 6/17 (35%), Positives = 10/17 (58%)
 Frame = +2

Query: 599 FAVVVCEYILCTWYIMY 649
           F +    ++LCT+Y  Y
Sbjct: 89  FIIFTVHFLLCTYYFYY 105


>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 15/51 (29%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
 Frame = +3

Query: 363 RWCLLDSR--RQMSVLTLLPISNLLPSNFKVIENSIRSIFHNISGIYFLFS 509
           R C L  R   ++S + L+  ++ L      + NS+R + +N+  IYF +S
Sbjct: 275 RLCRLCKRVDEEISYIVLMSFASDLLFILIQLFNSLRQMKNNLERIYFYWS 325


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 15/51 (29%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
 Frame = +3

Query: 363 RWCLLDSR--RQMSVLTLLPISNLLPSNFKVIENSIRSIFHNISGIYFLFS 509
           R C L  R   ++S + L+  ++ L      + NS+R + +N+  IYF +S
Sbjct: 275 RLCRLCKRVDEEISYIVLMSFASDLLFILIQLFNSLRQMKNNLERIYFYWS 325


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 15/51 (29%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
 Frame = +3

Query: 363 RWCLLDSR--RQMSVLTLLPISNLLPSNFKVIENSIRSIFHNISGIYFLFS 509
           R C L  R   ++S + L+  ++ L      + NS+R + +N+  IYF +S
Sbjct: 275 RLCRLCKRVDEEISYIVLMSFASDLLFILIQLFNSLRQMKNNLERIYFYWS 325


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = -1

Query: 662 ITSHNTLCTRYIIC 621
           I  H T CTRY  C
Sbjct: 105 IFGHETSCTRYWTC 118


>DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9
           protein.
          Length = 383

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 9/18 (50%), Positives = 9/18 (50%)
 Frame = -3

Query: 399 RSFAFLSPANTILVPGMY 346
           R FA   P NT L  G Y
Sbjct: 266 RGFALADPTNTSLYAGTY 283


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = +3

Query: 60  DFGRPKKFGCYINYKNLKWV 119
           DFGRP  F C      +K +
Sbjct: 340 DFGRPATFTCNFEGNPIKTI 359


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,638
Number of Sequences: 336
Number of extensions: 4061
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18010165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)