Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc29e17
         (626 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          25   0.60 
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      25   0.60 
DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.          25   0.80 
AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    24   1.1  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    24   1.1  
DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protei...    21   7.4  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    21   9.8  

>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 25.0 bits (52), Expect = 0.60
 Identities = 13/40 (32%), Positives = 21/40 (52%)
 Frame = -2

Query: 454 DPFYFMHDVEKRNVFVESVKEFLQVWKFFDGVDVDWEFPG 335
           D F+ M+D+E   +F E ++  L   K F   +  + FPG
Sbjct: 563 DCFFTMNDLEPSEIFYEKIETSLNSDKPFTYNERIFGFPG 602


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 25.0 bits (52), Expect = 0.60
 Identities = 13/40 (32%), Positives = 21/40 (52%)
 Frame = -2

Query: 454 DPFYFMHDVEKRNVFVESVKEFLQVWKFFDGVDVDWEFPG 335
           D F+ M+D+E   +F E ++  L   K F   +  + FPG
Sbjct: 563 DCFFTMNDLEPSEIFYEKIETSLNSDKPFTYNERIFGFPG 602


>DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.
          Length = 495

 Score = 24.6 bits (51), Expect = 0.80
 Identities = 11/42 (26%), Positives = 19/42 (45%)
 Frame = -2

Query: 223 RVYELTSAISAGYDKIAVVNYAEAQKSLDKIFLMTYDFKGAW 98
           RV +++S     +D   +VN       + K F  TY++   W
Sbjct: 226 RVTKMSSINPCIFDNATIVNNGPEAAKMAKAFTYTYNYSMYW 267


>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 11/28 (39%), Positives = 13/28 (46%)
 Frame = -2

Query: 556 WNEPYKGNFGQLMAAKLANPHLKILPSI 473
           W E Y G   Q M A +   +  I PSI
Sbjct: 434 WEEVYNGYIYQKMVADVVGDYFFICPSI 461


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 11/28 (39%), Positives = 13/28 (46%)
 Frame = -2

Query: 556 WNEPYKGNFGQLMAAKLANPHLKILPSI 473
           W E Y G   Q M A +   +  I PSI
Sbjct: 434 WEEVYNGYIYQKMVADVVGDYFFICPSI 461


>DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protein
           protein.
          Length = 424

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = +1

Query: 328 LCRPEIPNRRRHHQKISTLAKIP 396
           +CRP+I     H  K+ T+ + P
Sbjct: 147 ICRPKIHVFSLHDNKLITMYRFP 169


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 9/34 (26%), Positives = 16/34 (47%)
 Frame = -2

Query: 112 FKGAWSNTDLGYQTTVYAPSWNSEELYTTHYAVD 11
           F G + +T++G +       +N  E   TH  +D
Sbjct: 295 FNGWYMSTEIGSRDLCDVQRYNLLETIATHMGLD 328


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 185,043
Number of Sequences: 438
Number of extensions: 4064
Number of successful extensions: 14
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18704709
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)