Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc29e16
         (646 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    26   0.31 
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    23   2.8  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    21   6.6  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    21   6.6  
EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    21   8.7  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    21   8.7  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   8.7  
AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.       21   8.7  

>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 25.8 bits (54), Expect = 0.31
 Identities = 13/49 (26%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
 Frame = -1

Query: 220 MHMLQFMTTTYLYLIKRLSIYKYV-YSHQNHSHYPIVTVILLLSAIYAV 77
           +H+L ++T T++ L+    I  YV + H +   Y +V  +L    +Y +
Sbjct: 253 LHLLLWITVTFILLVGDSYIVMYVFFFHLSDVRYVMVVYLLKNVVLYGL 301


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 9/25 (36%), Positives = 17/25 (68%)
 Frame = +1

Query: 385  KKKHYAEVVKINSCKYLGQNFIQIN 459
            KKK   E +++++   LGQNF+ ++
Sbjct: 1529 KKKTSTEWIQVSNNVKLGQNFVLLD 1553


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 7/23 (30%), Positives = 14/23 (60%)
 Frame = -1

Query: 250 CHLARHLVVLMHMLQFMTTTYLY 182
           CH   H+V+ M+++  + T  +Y
Sbjct: 671 CHFLFHIVIGMNLIIHVGTQLIY 693


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = +2

Query: 590 CKW*RGPSAVIQLFFC 637
           C W  GP+A +Q   C
Sbjct: 18  CNWSSGPNATLQSSAC 33


>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = -2

Query: 237 VTWWF*CICYNL*P 196
           +TW+  C+ YN+ P
Sbjct: 198 ITWYQQCVTYNVFP 211


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = -2

Query: 237 VTWWF*CICYNL*P 196
           +TW+  C+ YN+ P
Sbjct: 198 ITWYQQCVTYNVFP 211


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 8/27 (29%), Positives = 13/27 (48%)
 Frame = -1

Query: 265 NITLCCHLARHLVVLMHMLQFMTTTYL 185
           N+ L CH+   L+V     QF+    +
Sbjct: 170 NVILACHMLSFLMVHQGETQFVAANVI 196


>AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.
          Length = 256

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = +3

Query: 600 DAGRARSFSYSFVV 641
           D  RARS SYS V+
Sbjct: 58  DPNRARSVSYSTVI 71


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 148,517
Number of Sequences: 336
Number of extensions: 3273
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16552695
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)