Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc29e16
         (646 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X98185-1|CAA66860.1|  123|Anopheles gambiae histone H2B protein.       28   0.29 
CR954257-6|CAJ14157.1|  375|Anopheles gambiae RrnaAD, ribosomal ...    26   0.89 
AJ618922-1|CAF02001.1|  272|Anopheles gambiae odorant-binding pr...    25   1.6  
AJ618921-1|CAF02000.1|  172|Anopheles gambiae putative odorant-b...    25   1.6  
AY391746-1|AAR28996.1|  502|Anopheles gambiae putative GPCR prot...    25   2.7  
AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcript...    25   2.7  
Z49815-1|CAA89969.1|  237|Anopheles gambiae serine proteinase pr...    23   6.3  
AY805323-1|AAV66543.1|  459|Anopheles gambiae beta subunit-GABA-...    23   8.3  

>X98185-1|CAA66860.1|  123|Anopheles gambiae histone H2B protein.
          Length = 123

 Score = 27.9 bits (59), Expect = 0.29
 Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
 Frame = -2

Query: 525 ANENASGDAASHLRVSWSKNISIYLYKILSQIF--TTVNFYNFSVMFFFNNNTRPKIAR 355
           A +N S       R +  +   IY+YK+L Q+   T ++    S+M  F N+   +IAR
Sbjct: 16  AQKNISKSDKKKKRKTRKRATPIYIYKVLKQVHPDTGISSKAMSIMNSFVNDIFERIAR 74


>CR954257-6|CAJ14157.1|  375|Anopheles gambiae RrnaAD, ribosomal RNA
           adenine dimethylaseprotein.
          Length = 375

 Score = 26.2 bits (55), Expect = 0.89
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = +3

Query: 528 STKLFSVYWRIKYIRYYLNIV 590
           S +LFSV   +KY+RY +N +
Sbjct: 100 SFRLFSVIGTVKYLRYLMNSI 120


>AJ618922-1|CAF02001.1|  272|Anopheles gambiae odorant-binding
           protein OBPjj5a protein.
          Length = 272

 Score = 25.4 bits (53), Expect = 1.6
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = -1

Query: 310 QSL*QDCFTKKFFYLNITLCCHLARHLVV 224
           Q+L +DC   K F   +  CC L   L +
Sbjct: 21  QTLAEDCMDIKIFTTKVASCCQLEEFLTL 49


>AJ618921-1|CAF02000.1|  172|Anopheles gambiae putative
           odorant-binding protein OBP5479 protein.
          Length = 172

 Score = 25.4 bits (53), Expect = 1.6
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = -1

Query: 310 QSL*QDCFTKKFFYLNITLCCHLARHLVV 224
           Q+L +DC   K F   +  CC L   L +
Sbjct: 21  QTLAEDCMDIKIFTTKVASCCQLEEFLTL 49


>AY391746-1|AAR28996.1|  502|Anopheles gambiae putative GPCR
           protein.
          Length = 502

 Score = 24.6 bits (51), Expect = 2.7
 Identities = 13/37 (35%), Positives = 21/37 (56%)
 Frame = -1

Query: 280 KFFYLNITLCCHLARHLVVLMHMLQFMTTTYLYLIKR 170
           +FF  + +LCC L+   VV   + +F+    LY +KR
Sbjct: 193 RFFTFSSSLCCFLSVWFVVAFTVERFIAV--LYPLKR 227


>AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1209

 Score = 24.6 bits (51), Expect = 2.7
 Identities = 12/34 (35%), Positives = 21/34 (61%)
 Frame = -1

Query: 103 LLLSAIYAVNNYWNNRTISQNKHCSNRTIFKTDY 2
           L +S I+ + +Y+     SQN+H   RT++K D+
Sbjct: 893 LCISQIHQLRSYFVE---SQNRHELYRTVYKADH 923


>Z49815-1|CAA89969.1|  237|Anopheles gambiae serine proteinase
           protein.
          Length = 237

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = -1

Query: 124 YPIVTVILLLSAIYAVNNYWNNRTISQNKHC 32
           YP + ++L   A Y   +  N+R I    HC
Sbjct: 12  YPWIVMLLYRGAFYCGGSLINDRYIVTAAHC 42


>AY805323-1|AAV66543.1|  459|Anopheles gambiae beta
           subunit-GABA-A-gated chloride channelprotein.
          Length = 459

 Score = 23.0 bits (47), Expect = 8.3
 Identities = 15/60 (25%), Positives = 27/60 (45%)
 Frame = -2

Query: 513 ASGDAASHLRVSWSKNISIYLYKILSQIFTTVNFYNFSVMFFFNNNTRPKIARNCDARLK 334
           ++G  +S  R+S+ K I IYL      +F  +  Y      ++    + K  +N +A  K
Sbjct: 269 STGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYTYWGARAKKKSKKNKEAERK 328


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 638,687
Number of Sequences: 2352
Number of extensions: 11724
Number of successful extensions: 18
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63559560
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)