Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc29e13
         (677 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    26   0.33 
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    23   1.7  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    23   3.0  
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    22   5.3  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    22   5.3  
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    21   7.0  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    21   9.3  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 25.8 bits (54), Expect = 0.33
 Identities = 16/47 (34%), Positives = 20/47 (42%)
 Frame = -1

Query: 377  PGLPESPAQKNVSTPVPS*LKFTSNRVQSSTAYTSPDTWWW*VLNSP 237
            P  P +PA   V+T V +    T +     T  T P TWW     SP
Sbjct: 1006 PPEPVTPAPPQVTTGVDTGASSTEHMHPDWT--TKPSTWWSSTTTSP 1050


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 13/43 (30%), Positives = 18/43 (41%), Gaps = 1/43 (2%)
 Frame = -1

Query: 389 KPCGPGLPESPAQKNVSTPVPS*LK-FTSNRVQSSTAYTSPDT 264
           K CG  +P  P Q  +  P P       +N   SST    P++
Sbjct: 401 KHCGVNVPVPPMQSQIINPQPQITSPSNTNTSTSSTNSNKPNS 443


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = +1

Query: 199 AQDDNGPYLGRSIGEFNTYHHQVSGDVYAVDD 294
           A DD   +L  S   F TY +  +   Y++DD
Sbjct: 91  ATDDFAYFLEVSNNNFKTYSNVTTCSYYSLDD 122


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 12/44 (27%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
 Frame = -2

Query: 160 QYITSLSHFVSLMT-NILILSNLKRLEHFNFANLVSLVLYSTYF 32
           Q I + + F+  ++ NI +   +   E+F    L+ + LY  YF
Sbjct: 181 QLILTQAIFLMFVSYNIYVCQTVSNFEYFQRKILLMIQLYYLYF 224


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 12/44 (27%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
 Frame = -2

Query: 160 QYITSLSHFVSLMT-NILILSNLKRLEHFNFANLVSLVLYSTYF 32
           Q I + + F+  ++ NI +   +   E+F    L+ + LY  YF
Sbjct: 107 QLILTQAIFLMFVSYNIYVCQTVSNFEYFQRKILLMIQLYYLYF 150


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 6/19 (31%), Positives = 14/19 (73%)
 Frame = -3

Query: 435 VSLQDIGFAKLIRDYKTLW 379
           ++L+ +G +  + DY++LW
Sbjct: 252 MALKHVGPSSQVADYRSLW 270


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = -2

Query: 580 VTEVLEQRNLQVYTHPQM 527
           +TEV +Q    +Y H Q+
Sbjct: 494 ITEVTQQTEPSIYQHDQL 511


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,583
Number of Sequences: 336
Number of extensions: 4245
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17697850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)