Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc29e13
         (677 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB209010-1|BAD92247.1|  550|Homo sapiens dual oxidase 2 precurso...    31   3.8  
BC036522-1|AAH36522.1|  780|Homo sapiens cation channel, sperm a...    30   8.7  
BC032950-1|AAH32950.1|  780|Homo sapiens cation channel, sperm a...    30   8.7  
AF407333-1|AAL14105.1|  780|Homo sapiens sperm ion channel protein.    30   8.7  

>AB209010-1|BAD92247.1|  550|Homo sapiens dual oxidase 2 precursor
           variant protein.
          Length = 550

 Score = 31.1 bits (67), Expect = 3.8
 Identities = 39/136 (28%), Positives = 53/136 (38%), Gaps = 8/136 (5%)
 Frame = +1

Query: 250 TYHHQVSGDVYAVDDWTLLLVNFNYDGTGVDTFFWAGDSGRPGPQ-GFIIPDQFGKTNVL 426
           TY H +S  V  V + T  L N +     +         G PGP    I+ DQF +    
Sbjct: 17  TYAHPLSPVVPQVLEATAALYNQDLSQLELLLGGLLESHGDPGPLFSAIVLDQFVRLRDG 76

Query: 427 ERYYNEEVRLTLPEGKRISRIK-------WFAVYDIDSQNAFGDVYIPEDFSAPAPQSLA 585
           +RY+ E  R  L   K I  I+         AV +ID      +V++     AP PQ   
Sbjct: 77  DRYWFENTRNGLFSKKEIEDIRNTTLRDVLVAVINIDPSALQPNVFVWHK-GAPCPQPKQ 135

Query: 586 AFSSAAVTSKPLRVLD 633
             +       PL VLD
Sbjct: 136 LTTDGLPQCAPLTVLD 151


>BC036522-1|AAH36522.1|  780|Homo sapiens cation channel, sperm
           associated 1 protein.
          Length = 780

 Score = 29.9 bits (64), Expect = 8.7
 Identities = 16/45 (35%), Positives = 21/45 (46%)
 Frame = -2

Query: 331 YHHS*NSPVIGSSHLQHTHHLIPGGGKY*TRQ*IVLGRDHYHPAH 197
           +HHS  S + G  H +  HH +P  G     Q    GR  +H AH
Sbjct: 191 FHHSEASHLSGLQHDESQHHQVPHRGWPHHHQVHHHGRSRHHEAH 235


>BC032950-1|AAH32950.1|  780|Homo sapiens cation channel, sperm
           associated 1 protein.
          Length = 780

 Score = 29.9 bits (64), Expect = 8.7
 Identities = 16/45 (35%), Positives = 21/45 (46%)
 Frame = -2

Query: 331 YHHS*NSPVIGSSHLQHTHHLIPGGGKY*TRQ*IVLGRDHYHPAH 197
           +HHS  S + G  H +  HH +P  G     Q    GR  +H AH
Sbjct: 191 FHHSEASHLSGLQHDESQHHQVPHRGWPHHHQVHHHGRSRHHEAH 235


>AF407333-1|AAL14105.1|  780|Homo sapiens sperm ion channel protein.
          Length = 780

 Score = 29.9 bits (64), Expect = 8.7
 Identities = 16/45 (35%), Positives = 21/45 (46%)
 Frame = -2

Query: 331 YHHS*NSPVIGSSHLQHTHHLIPGGGKY*TRQ*IVLGRDHYHPAH 197
           +HHS  S + G  H +  HH +P  G     Q    GR  +H AH
Sbjct: 191 FHHSEASHLSGLQHDESQHHQVPHRGWPHHHQVHHHGRSRHHEAH 235


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,074,681
Number of Sequences: 237096
Number of extensions: 2351379
Number of successful extensions: 5645
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4838
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5645
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7671262118
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)