Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc29e13
(677 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41508-5|AAG00025.2| 511|Caenorhabditis elegans Hypothetical pr... 64 9e-11
AF326938-1|AAG49388.1| 511|Caenorhabditis elegans XG314 protein. 64 9e-11
Z99773-2|CAB16924.1| 291|Caenorhabditis elegans Hypothetical pr... 42 5e-04
U41508-6|ABS19459.1| 323|Caenorhabditis elegans Hypothetical pr... 31 1.00
Z73104-7|CAI59116.1| 513|Caenorhabditis elegans Hypothetical pr... 29 4.0
Z73104-6|CAI59115.1| 431|Caenorhabditis elegans Hypothetical pr... 29 4.0
Z73104-4|CAA97435.2| 547|Caenorhabditis elegans Hypothetical pr... 29 4.0
U00065-10|AAA50733.2| 382|Caenorhabditis elegans Hypothetical p... 29 4.0
Z81581-8|CAB04661.2| 244|Caenorhabditis elegans Hypothetical pr... 28 5.3
AF000197-3|AAB52898.2| 109|Caenorhabditis elegans Hypothetical ... 28 7.0
AC087081-8|AAY55899.1| 499|Caenorhabditis elegans Hypothetical ... 28 7.0
AF077536-6|ABO16440.1| 309|Caenorhabditis elegans Hypothetical ... 27 9.3
AF003135-7|AAK18991.1| 254|Caenorhabditis elegans Hypothetical ... 27 9.3
>U41508-5|AAG00025.2| 511|Caenorhabditis elegans Hypothetical
protein W01C8.5a protein.
Length = 511
Score = 64.1 bits (149), Expect = 9e-11
Identities = 46/183 (25%), Positives = 81/183 (44%), Gaps = 5/183 (2%)
Frame = +1
Query: 139 VIKMLCIGFILFIGLAKECYAQDDNGPYLGRSIGEFNTYHHQVSGDVYAVDDWTLLLVNF 318
+ K++ I F+ + CY + G +G+ ++ +SG V+ V+ TL + N
Sbjct: 2 ISKLVQIVFLSLAASSTYCYDINTYNADYGVYVGDLSSPETDISGQVFIVNATTLQIFNL 61
Query: 319 NYDGTGVDTFFWAGDSGRPGPQGFIIPD-QFGKTNVLE-RYYNEEVRLTLPEGKRISRIK 492
+ + D +FW P +G ++G T + N+ V + +PE RI K
Sbjct: 62 TFSPSQQDLYFWLDTKDVPTREGIKAHTFEYGITPLGSFPEDNDRVVVHVPEKHRIDEFK 121
Query: 493 WFAVYDIDSQNAFGDVYIPEDFSAPAPQSLAA-FSSA--AVTSKPLRVLDASTILIPEFR 663
F++Y + + V PE+ P L+ FS + S PL V+D TI + F
Sbjct: 122 SFSIYSFKTDKSMASVVFPENVKIPKSVKLSTEFSGKRYQLRSGPLYVIDRRTIKVYGFT 181
Query: 664 YDG 672
++G
Sbjct: 182 FEG 184
Score = 43.2 bits (97), Expect = 2e-04
Identities = 32/113 (28%), Positives = 52/113 (46%), Gaps = 8/113 (7%)
Frame = +1
Query: 241 EFNTYHHQV-SGDVYAVDDWTLLLVNFNYDGTGVD-TFFWAGDSGRPGPQGFIIPDQFGK 414
EF+ +Q+ SG +Y +D T+ + F ++G T+F+AG + GK
Sbjct: 154 EFSGKRYQLRSGPLYVIDRRTIKVYGFTFEGNKAPKTYFYAGRGASVSYSSGVKVAIRGK 213
Query: 415 -----TNVLERYYN-EEVRLTLPEGKRISRIKWFAVYDIDSQNAFGDVYIPED 555
+ + E Y +++ L LPE I I W +VY + FG V +P D
Sbjct: 214 DEKEISEISENYRGGKDIILELPENYDIFHIDWISVYCYKYRVNFGSVLVPTD 266
>AF326938-1|AAG49388.1| 511|Caenorhabditis elegans XG314 protein.
Length = 511
Score = 64.1 bits (149), Expect = 9e-11
Identities = 46/183 (25%), Positives = 81/183 (44%), Gaps = 5/183 (2%)
Frame = +1
Query: 139 VIKMLCIGFILFIGLAKECYAQDDNGPYLGRSIGEFNTYHHQVSGDVYAVDDWTLLLVNF 318
+ K++ I F+ + CY + G +G+ ++ +SG V+ V+ TL + N
Sbjct: 2 ISKLVQIVFLSLAASSTYCYDINTYNADYGVYVGDLSSPETDISGQVFIVNATTLQIFNL 61
Query: 319 NYDGTGVDTFFWAGDSGRPGPQGFIIPD-QFGKTNVLE-RYYNEEVRLTLPEGKRISRIK 492
+ + D +FW P +G ++G T + N+ V + +PE RI K
Sbjct: 62 TFSPSQQDLYFWLDTKDVPTREGIKAHTFEYGITPLGSFPEDNDRVVVHVPEKHRIDEFK 121
Query: 493 WFAVYDIDSQNAFGDVYIPEDFSAPAPQSLAA-FSSA--AVTSKPLRVLDASTILIPEFR 663
F++Y + + V PE+ P L+ FS + S PL V+D TI + F
Sbjct: 122 SFSIYSFKTDKSMASVVFPENVKIPKSVKLSTEFSGKRYQLRSGPLYVIDRRTIKVYGFT 181
Query: 664 YDG 672
++G
Sbjct: 182 FEG 184
Score = 43.2 bits (97), Expect = 2e-04
Identities = 32/113 (28%), Positives = 52/113 (46%), Gaps = 8/113 (7%)
Frame = +1
Query: 241 EFNTYHHQV-SGDVYAVDDWTLLLVNFNYDGTGVD-TFFWAGDSGRPGPQGFIIPDQFGK 414
EF+ +Q+ SG +Y +D T+ + F ++G T+F+AG + GK
Sbjct: 154 EFSGKRYQLRSGPLYVIDRRTIKVYGFTFEGNKAPKTYFYAGRGASVSYSSGVKVAIRGK 213
Query: 415 -----TNVLERYYN-EEVRLTLPEGKRISRIKWFAVYDIDSQNAFGDVYIPED 555
+ + E Y +++ L LPE I I W +VY + FG V +P D
Sbjct: 214 DEKEISEISENYRGGKDIILELPENYDIFHIDWISVYCYKYRVNFGSVLVPTD 266
>Z99773-2|CAB16924.1| 291|Caenorhabditis elegans Hypothetical
protein H06A10.1 protein.
Length = 291
Score = 41.5 bits (93), Expect = 5e-04
Identities = 41/163 (25%), Positives = 73/163 (44%), Gaps = 14/163 (8%)
Frame = +1
Query: 220 YLGRSIGEFNTYHHQVSGDVYAVDDWTLLLVNFNYDGTGVDTF---FWAGDSGRPGPQGF 390
Y G S+GEF+ V G+V+ V+ L +VNF T + F + ++ + P+ +
Sbjct: 23 YNGVSLGEFS--ESDVEGEVFLVNSTHLQIVNFRTTKTNLPPIPFAFISSNNQKSTPKIY 80
Query: 391 I-IPDQFGK-----TNVLERYYNEEVRLTLPEGKRISRIKWFAVYDIDSQNAFGDVYIPE 552
Q G+ ++ + + RL + ++ K FAV D + N V + +
Sbjct: 81 RHFSSQNGEWLSKLVSLSHEQHQIDTRLIVKMTGSAAQWKQFAVVDSNG-NTLASVNMNQ 139
Query: 553 DFSAP-----APQSLAAFSSAAVTSKPLRVLDASTILIPEFRY 666
SAP + + F + S P+ V+D+ T+ IP+F Y
Sbjct: 140 KPSAPFCCFESEADMGLFGEYGIISDPIEVIDSRTLKIPKFSY 182
>U41508-6|ABS19459.1| 323|Caenorhabditis elegans Hypothetical
protein W01C8.5b protein.
Length = 323
Score = 30.7 bits (66), Expect = 1.00
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +1
Query: 415 TNVLERYYN-EEVRLTLPEGKRISRIKWFAVYDIDSQNAFGDVYIPED 555
+ + E Y +++ L LPE I I W +VY + FG V +P D
Sbjct: 31 SEISENYRGGKDIILELPENYDIFHIDWISVYCYKYRVNFGSVLVPTD 78
>Z73104-7|CAI59116.1| 513|Caenorhabditis elegans Hypothetical
protein K08D8.4d protein.
Length = 513
Score = 28.7 bits (61), Expect = 4.0
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +1
Query: 415 TNVLERYYNEEVRLTLPEGKRISRIKWFAVYD 510
TN L+ Y+++ LT+P K KW +V+D
Sbjct: 322 TNSLKIYHSDTGLLTVPVAKNADAAKWNSVFD 353
>Z73104-6|CAI59115.1| 431|Caenorhabditis elegans Hypothetical
protein K08D8.4c protein.
Length = 431
Score = 28.7 bits (61), Expect = 4.0
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +1
Query: 415 TNVLERYYNEEVRLTLPEGKRISRIKWFAVYD 510
TN L+ Y+++ LT+P K KW +V+D
Sbjct: 322 TNSLKIYHSDTGLLTVPVAKNADAAKWNSVFD 353
>Z73104-4|CAA97435.2| 547|Caenorhabditis elegans Hypothetical
protein K08D8.4a protein.
Length = 547
Score = 28.7 bits (61), Expect = 4.0
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +1
Query: 415 TNVLERYYNEEVRLTLPEGKRISRIKWFAVYD 510
TN L+ Y+++ LT+P K KW +V+D
Sbjct: 322 TNSLKIYHSDTGLLTVPVAKNADAAKWNSVFD 353
>U00065-10|AAA50733.2| 382|Caenorhabditis elegans Hypothetical
protein D1044.1 protein.
Length = 382
Score = 28.7 bits (61), Expect = 4.0
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = -2
Query: 157 YITSLSHFVSLMTNILILSNLKRLEHFNFANLVSLVLYSTYFRLF 23
Y T SHF + L R HFNF N SL S Y++++
Sbjct: 307 YTTFKSHFSTAPFTFSQLEESYRT-HFNFVNATSLFSLSYYYKMY 350
>Z81581-8|CAB04661.2| 244|Caenorhabditis elegans Hypothetical
protein T02E1.6 protein.
Length = 244
Score = 28.3 bits (60), Expect = 5.3
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +1
Query: 403 QFGKTNVLERYYNEEVRLTLP 465
QFG+ NV+E NE++R +P
Sbjct: 163 QFGRLNVVEEALNEDIRFRIP 183
>AF000197-3|AAB52898.2| 109|Caenorhabditis elegans Hypothetical
protein T21G5.2 protein.
Length = 109
Score = 27.9 bits (59), Expect = 7.0
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = -2
Query: 154 ITSLSHFVSLMTNILILSNLKRLEHFNFANLVSLVLYSTYF 32
I S S F+ TN+ LSN R E F + L ++L S F
Sbjct: 66 IVSFSRFIKFQTNLRQLSNYCRNERFFTSFLKIIILTSINF 106
>AC087081-8|AAY55899.1| 499|Caenorhabditis elegans Hypothetical
protein Y82E9BL.18 protein.
Length = 499
Score = 27.9 bits (59), Expect = 7.0
Identities = 20/75 (26%), Positives = 36/75 (48%), Gaps = 4/75 (5%)
Frame = +1
Query: 301 LLLVNFNYDGT-GVDTFFWAGDSGRPGPQGFIIPDQFGKTNVLERYYNEE---VRLTLPE 468
++ NF + + FF AGD G G + DQF + LE++ N E + + +
Sbjct: 340 IVFENFRFQSICSILPFFAAGDLEEIGVWGTRVGDQFDQITKLEQWKNAETFNMLFSKLD 399
Query: 469 GKRISRIKWFAVYDI 513
GK I ++ F +++
Sbjct: 400 GKCIKQLFHFDEFNV 414
>AF077536-6|ABO16440.1| 309|Caenorhabditis elegans Hypothetical
protein C16A11.6 protein.
Length = 309
Score = 27.5 bits (58), Expect = 9.3
Identities = 11/33 (33%), Positives = 22/33 (66%)
Frame = -2
Query: 145 LSHFVSLMTNILILSNLKRLEHFNFANLVSLVL 47
L H + ++ LI++N++ +E F+F NL+ +L
Sbjct: 174 LFHGIGTLSTELIVANIEGVEVFDFLNLIDALL 206
>AF003135-7|AAK18991.1| 254|Caenorhabditis elegans Hypothetical
protein W03F11.5b protein.
Length = 254
Score = 27.5 bits (58), Expect = 9.3
Identities = 15/30 (50%), Positives = 20/30 (66%), Gaps = 2/30 (6%)
Frame = -3
Query: 216 TIIILRITFFS--KSYEQDETNT*HLYHTS 133
TI++L IT FS KSYE++E +YH S
Sbjct: 11 TILLLFITIFSGAKSYEEEEEVPRGIYHFS 40
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,023,646
Number of Sequences: 27780
Number of extensions: 367519
Number of successful extensions: 966
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 856
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 964
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1539654388
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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