Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc29e12
         (459 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ974166-1|ABJ52806.1|  494|Anopheles gambiae serpin 6 protein.        23   5.1  
AY583530-1|AAS93544.1|  260|Anopheles gambiae NOS protein protein.     23   5.1  
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ...    22   9.0  
AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin b...    22   9.0  

>DQ974166-1|ABJ52806.1|  494|Anopheles gambiae serpin 6 protein.
          Length = 494

 Score = 23.0 bits (47), Expect = 5.1
 Identities = 20/68 (29%), Positives = 30/68 (44%), Gaps = 3/68 (4%)
 Frame = +3

Query: 159 AVSLSVNNSDGHGGVPISAERRPRIRPPVLHAPEQGARPSP---*ILQQLLVVHPRRSRR 329
           A  +++ +S    G P  +  RPR   P  +AP Q    +P     + QL+V    R  R
Sbjct: 42  AQRVALRHSFETDGTPAPSTVRPRPPAPPTNAPSQLPALTPDNDAKISQLVVDFMMRISR 101

Query: 330 PQPRDASR 353
             P+  SR
Sbjct: 102 TLPQQQSR 109


>AY583530-1|AAS93544.1|  260|Anopheles gambiae NOS protein protein.
          Length = 260

 Score = 23.0 bits (47), Expect = 5.1
 Identities = 9/29 (31%), Positives = 14/29 (48%)
 Frame = -2

Query: 242 WRTNSRPTLCGDGDASMTIAVVDTERYSL 156
           WR  +   +C D DA+ T   ++ E   L
Sbjct: 71  WRNTTLDEICADFDANGTTCELEEEEVDL 99


>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 1222

 Score = 22.2 bits (45), Expect = 9.0
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = -3

Query: 82  RKFFNKLSENRKEPTSP 32
           R   N+L+E+ +EP+SP
Sbjct: 565 RLILNRLNEHLEEPSSP 581


>AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 568

 Score = 22.2 bits (45), Expect = 9.0
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = +3

Query: 195 GGVPISAERRPRIRPP 242
           G VP +AER  R RPP
Sbjct: 324 GPVPGAAERHRRRRPP 339


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 483,976
Number of Sequences: 2352
Number of extensions: 9202
Number of successful extensions: 34
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 39544623
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)