Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc29e10
         (657 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY089467-1|AAL90205.1|  597|Drosophila melanogaster AT27838p pro...    28   9.7  
AE014297-577|AAF54049.2|  597|Drosophila melanogaster CG14609-PA...    28   9.7  

>AY089467-1|AAL90205.1|  597|Drosophila melanogaster AT27838p
           protein.
          Length = 597

 Score = 28.3 bits (60), Expect = 9.7
 Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
 Frame = +2

Query: 506 QSLGHRLQDLDLIAQNLGPKVLNHKQPK-AVPAPNQLLVVQENQ 634
           ++L H+LQ L  + +  G  + N  +PK A P  N    V+E Q
Sbjct: 286 KNLQHKLQMLSALKKPAGTSIANFNKPKEAAPTTNLKRYVRETQ 329


>AE014297-577|AAF54049.2|  597|Drosophila melanogaster CG14609-PA
           protein.
          Length = 597

 Score = 28.3 bits (60), Expect = 9.7
 Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
 Frame = +2

Query: 506 QSLGHRLQDLDLIAQNLGPKVLNHKQPK-AVPAPNQLLVVQENQ 634
           ++L H+LQ L  + +  G  + N  +PK A P  N    V+E Q
Sbjct: 286 KNLQHKLQMLSALKKPAGTSIANFNKPKEAAPTTNLKRYVRETQ 329


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,213,014
Number of Sequences: 53049
Number of extensions: 377645
Number of successful extensions: 1021
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1010
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1021
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2806815600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)