Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc29e05
(661 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI0000DB7667 Cluster: PREDICTED: similar to CG32344-PA... 226 3e-58
UniRef50_UPI00015B5D7B Cluster: PREDICTED: similar to LD28101p; ... 217 1e-55
UniRef50_Q8SY39 Cluster: LD28101p; n=3; Diptera|Rep: LD28101p - ... 215 1e-54
UniRef50_Q8TDD1 Cluster: ATP-dependent RNA helicase DDX54; n=45;... 213 2e-54
UniRef50_UPI0001555979 Cluster: PREDICTED: similar to ATP-depend... 208 9e-53
UniRef50_Q4SJI2 Cluster: Chromosome 4 SCAF14575, whole genome sh... 205 6e-52
UniRef50_Q16W98 Cluster: DEAD box ATP-dependent RNA helicase; n=... 198 7e-50
UniRef50_Q6C7X8 Cluster: ATP-dependent RNA helicase DBP10; n=3; ... 186 4e-46
UniRef50_Q09719 Cluster: ATP-dependent RNA helicase dbp10; n=2; ... 186 5e-46
UniRef50_Q5BFU7 Cluster: ATP-dependent RNA helicase dbp10; n=14;... 185 1e-45
UniRef50_Q688Z4 Cluster: Putative uncharacterized protein; n=3; ... 184 1e-45
UniRef50_Q2H0R2 Cluster: ATP-dependent RNA helicase DBP10; n=1; ... 182 7e-45
UniRef50_A4R5B8 Cluster: ATP-dependent RNA helicase DBP10; n=2; ... 178 1e-43
UniRef50_Q0UMB6 Cluster: ATP-dependent RNA helicase DBP10; n=1; ... 177 2e-43
UniRef50_O49289 Cluster: Putative DEAD-box ATP-dependent RNA hel... 171 2e-41
UniRef50_Q12389 Cluster: ATP-dependent RNA helicase DBP10; n=10;... 169 4e-41
UniRef50_A3BT52 Cluster: DEAD-box ATP-dependent RNA helicase 29;... 167 3e-40
UniRef50_UPI0000499A01 Cluster: DEAD/DEAH box helicase; n=1; Ent... 161 1e-38
UniRef50_Q54CD8 Cluster: Putative RNA helicase; n=2; Dictyosteli... 158 1e-37
UniRef50_Q5CHB7 Cluster: Putative uncharacterized protein; n=2; ... 157 3e-37
UniRef50_Q4Q2Z6 Cluster: ATP-dependent RNA helicase, putative; n... 156 4e-37
UniRef50_Q238V7 Cluster: Type III restriction enzyme, res subuni... 152 6e-36
UniRef50_A6QYH1 Cluster: 2-isopropylmalate synthase; n=4; Ascomy... 149 6e-35
UniRef50_P32892 Cluster: ATP-dependent RNA helicase DRS1; n=13; ... 145 7e-34
UniRef50_Q54TJ4 Cluster: Putative uncharacterized protein; n=1; ... 143 4e-33
UniRef50_Q5BF42 Cluster: Putative uncharacterized protein; n=1; ... 142 5e-33
UniRef50_Q0LVA0 Cluster: Helicase-like:DEAD/DEAH box helicase-li... 141 1e-32
UniRef50_Q0HYG8 Cluster: DEAD/DEAH box helicase domain protein; ... 140 3e-32
UniRef50_A0KTC9 Cluster: DEAD/DEAH box helicase domain protein; ... 139 5e-32
UniRef50_Q09903 Cluster: ATP-dependent RNA helicase drs1; n=1; S... 139 5e-32
UniRef50_Q4P3W3 Cluster: ATP-dependent RNA helicase DBP10; n=1; ... 139 5e-32
UniRef50_A0EIJ0 Cluster: Chromosome undetermined scaffold_99, wh... 139 6e-32
UniRef50_Q9ZRZ8 Cluster: DEAD-box ATP-dependent RNA helicase 28;... 138 8e-32
UniRef50_P25888 Cluster: Putative ATP-dependent RNA helicase rhl... 137 3e-31
UniRef50_P0C2N7 Cluster: ATP-dependent RNA helicase DRS1; n=2; C... 136 3e-31
UniRef50_Q96GQ7 Cluster: Probable ATP-dependent RNA helicase DDX... 136 3e-31
UniRef50_P0C2N8 Cluster: ATP-dependent RNA helicase drs-1; n=16;... 136 4e-31
UniRef50_A5G1U8 Cluster: DEAD/DEAH box helicase domain protein; ... 132 9e-30
UniRef50_Q89UH0 Cluster: Dead-box ATP-dependent RNA helicase; n=... 131 1e-29
UniRef50_UPI00015B6038 Cluster: PREDICTED: similar to DEAD box A... 131 2e-29
UniRef50_Q4V836 Cluster: MGC114699 protein; n=9; Deuterostomia|R... 130 2e-29
UniRef50_Q016I5 Cluster: Predicted ATP-dependent RNA helicase FA... 129 5e-29
UniRef50_A2EAD4 Cluster: DEAD/DEAH box helicase family protein; ... 129 5e-29
UniRef50_Q4P9P3 Cluster: ATP-dependent RNA helicase DRS1; n=1; U... 129 7e-29
UniRef50_UPI00003C8469 Cluster: hypothetical protein Faci_030017... 128 2e-28
UniRef50_Q82T78 Cluster: RhlE; ATP-dependent RNA helicase RhlE; ... 128 2e-28
UniRef50_A0KZD5 Cluster: DEAD/DEAH box helicase domain protein; ... 128 2e-28
UniRef50_A2DSJ0 Cluster: DEAD/DEAH box helicase family protein; ... 128 2e-28
UniRef50_A3WD13 Cluster: DNA and RNA helicase; n=2; Alphaproteob... 127 2e-28
UniRef50_A0KXT6 Cluster: DEAD/DEAH box helicase domain protein; ... 127 2e-28
UniRef50_Q5FNK0 Cluster: ATP-dependent RNA helicase; n=1; Glucon... 127 3e-28
UniRef50_Q95XM9 Cluster: Putative uncharacterized protein; n=2; ... 127 3e-28
UniRef50_A6VTY7 Cluster: DEAD/DEAH box helicase domain protein; ... 126 4e-28
UniRef50_Q64VR8 Cluster: ATP-dependent RNA helicase DeaD; n=14; ... 126 6e-28
UniRef50_Q08Q14 Cluster: HeliCase, c-terminal:dead/deah box heli... 126 6e-28
UniRef50_Q62IF8 Cluster: ATP-dependent RNA helicase RhlE; n=59; ... 125 1e-27
UniRef50_Q0BSI7 Cluster: ATP-dependent RNA helicase; n=12; Alpha... 124 1e-27
UniRef50_Q5FUQ9 Cluster: ATP-dependent RNA helicase; n=11; cellu... 124 2e-27
UniRef50_Q3AZR1 Cluster: DEAD/DEAH box helicase-like; n=2; Synec... 124 2e-27
UniRef50_Q7JQN4 Cluster: LD15481p; n=7; Endopterygota|Rep: LD154... 124 2e-27
UniRef50_A4S6M9 Cluster: Predicted protein; n=3; Ostreococcus|Re... 123 4e-27
UniRef50_Q5L3G9 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 123 4e-27
UniRef50_Q9S531 Cluster: DEAD-box protein; n=4; Cystobacterineae... 122 8e-27
UniRef50_Q0FAJ4 Cluster: Dead-box ATP-dependent RNA helicase; n=... 122 8e-27
UniRef50_A6GPV2 Cluster: Helicase; n=1; Limnobacter sp. MED105|R... 122 1e-26
UniRef50_P44701 Cluster: ATP-dependent RNA helicase srmB homolog... 122 1e-26
UniRef50_UPI00015BD198 Cluster: UPI00015BD198 related cluster; n... 121 1e-26
UniRef50_UPI0000E87E35 Cluster: putative ATP-dependent RNA helic... 121 1e-26
UniRef50_Q8D6Y8 Cluster: Superfamily II DNA and RNA helicase; n=... 121 2e-26
UniRef50_Q67NW1 Cluster: ATP-dependent RNA helicase; n=5; Firmic... 121 2e-26
UniRef50_Q44NG9 Cluster: Helicase, C-terminal:DEAD/DEAH box heli... 121 2e-26
UniRef50_Q0G0P8 Cluster: Superfamily II DNA and RNA helicase; n=... 121 2e-26
UniRef50_Q21EB3 Cluster: DEAD/DEAH box helicase-like protein; n=... 120 2e-26
UniRef50_Q22T03 Cluster: DEAD/DEAH box helicase family protein; ... 120 2e-26
UniRef50_A7AWJ7 Cluster: DEAD/DEAH box helicase and helicase con... 120 2e-26
UniRef50_Q31EF0 Cluster: ATP-dependent RNA helicase; n=1; Thiomi... 120 4e-26
UniRef50_Q1MYS3 Cluster: Probable ATP-dependent RNA helicase; n=... 120 4e-26
UniRef50_P96614 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 120 4e-26
UniRef50_Q2BMZ1 Cluster: ATP-dependent RNA helicase; n=1; Neptun... 119 5e-26
UniRef50_A6NQG8 Cluster: Putative uncharacterized protein; n=2; ... 119 5e-26
UniRef50_A2U4F0 Cluster: Putative ATP-dependent RNA helicase; n=... 119 5e-26
UniRef50_Q8YH70 Cluster: ATP-DEPENDENT RNA HELICASE RHLE; n=10; ... 119 7e-26
UniRef50_Q6APU7 Cluster: Related to ATP-dependent RNA helicase; ... 119 7e-26
UniRef50_Q9N478 Cluster: Putative uncharacterized protein; n=2; ... 119 7e-26
UniRef50_Q2BP56 Cluster: Putative ATP-dependent RNA helicase; n=... 118 9e-26
UniRef50_Q1JSQ3 Cluster: Dead-box helicase, putative; n=1; Toxop... 118 1e-25
UniRef50_Q0AVQ9 Cluster: ATP-dependent RNA helicase; n=1; Syntro... 118 2e-25
UniRef50_A7CSF3 Cluster: DEAD/DEAH box helicase domain protein; ... 118 2e-25
UniRef50_A4SWL3 Cluster: DEAD/DEAH box helicase domain protein; ... 118 2e-25
UniRef50_Q4N0E9 Cluster: ATP-dependent RNA helicase, putative; n... 117 2e-25
UniRef50_A2SQE1 Cluster: DEAD/DEAH box helicase domain protein; ... 117 2e-25
UniRef50_Q11UP8 Cluster: ATP-dependent RNA helicase; n=1; Cytoph... 117 3e-25
UniRef50_Q11U28 Cluster: ATP-dependent RNA helicase protein; n=4... 117 3e-25
UniRef50_A0RP33 Cluster: Putative ATP-dependent RNA helicase Rhl... 117 3e-25
UniRef50_A0C321 Cluster: Chromosome undetermined scaffold_146, w... 117 3e-25
UniRef50_Q81VG0 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 117 3e-25
UniRef50_Q3AFI3 Cluster: ATP-dependent RNA helicase, DEAD box fa... 116 4e-25
UniRef50_A4LYS0 Cluster: DEAD/DEAH box helicase domain protein; ... 116 4e-25
UniRef50_Q8EZ11 Cluster: ATP-dependent RNA helicase; n=4; Leptos... 116 5e-25
UniRef50_Q39MK8 Cluster: DEAD/DEAH box helicase; n=10; Proteobac... 116 5e-25
UniRef50_A4FZ46 Cluster: DEAD/DEAH box helicase domain protein; ... 116 5e-25
UniRef50_Q6MR64 Cluster: ATP-dependent RNA helicase; n=5; cellul... 116 7e-25
UniRef50_Q5NML9 Cluster: DNA and RNA helicase; n=28; Alphaproteo... 116 7e-25
UniRef50_Q1MY97 Cluster: DEAD/DEAH box helicase-like protein; n=... 116 7e-25
UniRef50_A2DH37 Cluster: DEAD/DEAH box helicase family protein; ... 116 7e-25
UniRef50_Q6MN50 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 115 9e-25
UniRef50_Q0HKH0 Cluster: DEAD/DEAH box helicase domain protein; ... 115 9e-25
UniRef50_A7CUH7 Cluster: DEAD/DEAH box helicase domain protein; ... 115 9e-25
UniRef50_Q7QQ49 Cluster: GLP_139_12217_14094; n=1; Giardia lambl... 115 9e-25
UniRef50_P39517 Cluster: ATP-dependent RNA helicase DHH1; n=103;... 115 9e-25
UniRef50_Q7VFA9 Cluster: ATP-dependent RNA helicase DeaD; n=6; H... 115 1e-24
UniRef50_A1FEC3 Cluster: DEAD/DEAH box helicase-like; n=21; Gamm... 115 1e-24
UniRef50_Q7A4G0 Cluster: Probable DEAD-box ATP-dependent RNA hel... 115 1e-24
UniRef50_Q7R3I2 Cluster: GLP_158_41121_38797; n=1; Giardia lambl... 114 2e-24
UniRef50_Q5KIK3 Cluster: ATP-dependent RNA helicase DRS1; n=1; F... 114 2e-24
UniRef50_Q8XKJ8 Cluster: ATP-dependent RNA helicase; n=12; Clost... 114 2e-24
UniRef50_Q11WD3 Cluster: Possible ATP-dependent RNA helicase; n=... 114 2e-24
UniRef50_A7HDE9 Cluster: DEAD/DEAH box helicase domain protein; ... 114 2e-24
UniRef50_UPI00004987FF Cluster: DEAD/DEAH box helicase; n=5; Ent... 113 3e-24
UniRef50_A5EYB1 Cluster: ATP-dependent rna helicase Rhl; n=2; Ga... 113 3e-24
UniRef50_A2DB16 Cluster: DEAD/DEAH box helicase family protein; ... 113 3e-24
UniRef50_Q1N6E2 Cluster: ATP-dependent RNA helicase; n=1; Oceano... 113 4e-24
UniRef50_Q1I3W1 Cluster: ATP-dependent RNA helicase RhlE, DEAD b... 113 4e-24
UniRef50_Q15T34 Cluster: DEAD/DEAH box helicase-like; n=1; Pseud... 113 4e-24
UniRef50_A6CFZ8 Cluster: ATP-dependent RNA helicase; n=1; Planct... 113 4e-24
UniRef50_A5UZK3 Cluster: DEAD/DEAH box helicase domain protein; ... 113 4e-24
UniRef50_Q4P5U4 Cluster: ATP-dependent RNA helicase DBP4; n=1; U... 113 4e-24
UniRef50_Q30P62 Cluster: DEAD/DEAH box helicase-like; n=1; Thiom... 113 5e-24
UniRef50_Q869K2 Cluster: Similar to Dictyostelium discoideum (Sl... 113 5e-24
UniRef50_Q0W8H7 Cluster: ATP-dependent RNA helicase; n=1; uncult... 113 5e-24
UniRef50_Q11TW3 Cluster: Possible ATP-dependent RNA helicase; n=... 112 6e-24
UniRef50_A5FST0 Cluster: DEAD/DEAH box helicase domain protein; ... 112 6e-24
UniRef50_P20448 Cluster: ATP-dependent RNA helicase DBP4; n=13; ... 112 6e-24
UniRef50_Q12QV2 Cluster: DEAD/DEAH box helicase-like protein; n=... 112 8e-24
UniRef50_Q30YG9 Cluster: DEAD/DEAH box helicase-like; n=3; Delta... 111 1e-23
UniRef50_A7HKQ8 Cluster: DEAD/DEAH box helicase domain protein; ... 111 1e-23
UniRef50_A7HG33 Cluster: DEAD/DEAH box helicase domain protein; ... 111 1e-23
UniRef50_A6NSW7 Cluster: Putative uncharacterized protein; n=1; ... 111 1e-23
UniRef50_A0VLH7 Cluster: DEAD/DEAH box helicase domain protein; ... 111 1e-23
UniRef50_Q5CX71 Cluster: Hca4p helicase DBP4 (Helicase CA4). EIF... 111 1e-23
UniRef50_Q4N4B1 Cluster: ATP-dependent RNA helicase, putative; n... 111 1e-23
UniRef50_Q16JA8 Cluster: DEAD box ATP-dependent RNA helicase; n=... 111 1e-23
UniRef50_UPI0000D5571E Cluster: PREDICTED: similar to CG5800-PA;... 111 1e-23
UniRef50_Q9KAA6 Cluster: ATP-dependent RNA helicase; n=5; Firmic... 111 1e-23
UniRef50_A6TTG0 Cluster: DEAD/DEAH box helicase domain protein; ... 111 1e-23
UniRef50_Q5CWJ4 Cluster: Drs1p, eIF4a-1-family RNA SFII helicase... 111 1e-23
UniRef50_Q8D7D0 Cluster: Superfamily II DNA and RNA helicase; n=... 111 2e-23
UniRef50_Q81QF0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 111 2e-23
UniRef50_Q30SZ2 Cluster: DEAD/DEAH box helicase-like; n=1; Thiom... 111 2e-23
UniRef50_Q2YZZ9 Cluster: Putative uncharacterized protein; n=1; ... 111 2e-23
UniRef50_Q12B10 Cluster: DEAD/DEAH box helicase-like; n=13; Prot... 111 2e-23
UniRef50_A2DES1 Cluster: DEAD/DEAH box helicase family protein; ... 111 2e-23
UniRef50_Q978T9 Cluster: ATP-dependent RNA helicase; n=3; Thermo... 111 2e-23
UniRef50_A5DPU0 Cluster: ATP-dependent RNA helicase MAK5; n=1; P... 111 2e-23
UniRef50_A3EUK2 Cluster: Superfamily II DNA and RNA helicase; n=... 110 3e-23
UniRef50_A7U5X2 Cluster: DEAD-box helicase 15; n=2; Plasmodium f... 109 4e-23
UniRef50_Q5KMS9 Cluster: ATP-dependent RNA helicase DBP10; n=1; ... 109 4e-23
UniRef50_Q1FMF9 Cluster: Helicase-like:DbpA, RNA-binding:DEAD/DE... 109 6e-23
UniRef50_A6DIU5 Cluster: Probable ATP dependent RNA helicase; n=... 109 6e-23
UniRef50_A4M6V6 Cluster: DEAD/DEAH box helicase domain protein; ... 109 6e-23
UniRef50_A0LLL9 Cluster: DEAD/DEAH box helicase domain protein; ... 109 6e-23
UniRef50_Q9KLE2 Cluster: ATP-dependent RNA helicase DeaD; n=35; ... 109 8e-23
UniRef50_Q087U7 Cluster: DEAD/DEAH box helicase domain protein; ... 109 8e-23
UniRef50_Q3ZDP1 Cluster: Vasa-like protein; n=7; Neoptera|Rep: V... 109 8e-23
UniRef50_Q4P3U9 Cluster: ATP-dependent rRNA helicase RRP3; n=20;... 109 8e-23
UniRef50_A3ZWP8 Cluster: ATP-dependent RNA helicase; n=1; Blasto... 108 1e-22
UniRef50_A7U5W7 Cluster: DEAD-box helicase 2; n=6; Plasmodium|Re... 108 1e-22
UniRef50_Q9PGP6 Cluster: ATP-dependent RNA helicase; n=10; cellu... 108 1e-22
UniRef50_Q4FSS4 Cluster: Possible ATP-dependent DEAD/DEAH box RN... 108 1e-22
UniRef50_Q185X0 Cluster: ATP-dependent RNA helicase; n=3; Clostr... 108 1e-22
UniRef50_A4BHZ9 Cluster: ATP-dependent RNA helicase; n=1; Reinek... 108 1e-22
UniRef50_Q54Y81 Cluster: Putative RNA helicase; n=2; Dictyosteli... 108 1e-22
UniRef50_Q9K7L3 Cluster: RNA helicase; n=2; Bacillus|Rep: RNA he... 107 2e-22
UniRef50_Q6MN67 Cluster: ATP-dependent RNA helicase; n=3; Deltap... 107 2e-22
UniRef50_Q484Q1 Cluster: RNA helicase DeaD; n=1; Colwellia psych... 107 2e-22
UniRef50_Q0M1B5 Cluster: Helicase-like:DEAD/DEAH box helicase-li... 107 2e-22
UniRef50_A6PQ62 Cluster: DEAD/DEAH box helicase domain protein; ... 107 2e-22
UniRef50_A1KUM8 Cluster: Putative ATP-dependent RNA helicase; n=... 107 2e-22
UniRef50_A7S2R2 Cluster: Predicted protein; n=5; Eumetazoa|Rep: ... 107 2e-22
UniRef50_Q5KN79 Cluster: ATP-dependent RNA helicase DBP4; n=1; F... 107 2e-22
UniRef50_UPI0000DAE40A Cluster: hypothetical protein Rgryl_01000... 107 2e-22
UniRef50_Q9KNA4 Cluster: ATP-dependent RNA helicase, DEAD box fa... 107 2e-22
UniRef50_Q0RTL3 Cluster: Cold-shock DeaD box ATP-dependent RNA h... 107 2e-22
UniRef50_A0Z0M4 Cluster: ATP-dependent RNA helicase; n=1; marine... 107 2e-22
UniRef50_Q95QN2 Cluster: Putative uncharacterized protein; n=2; ... 107 2e-22
UniRef50_A5K9H3 Cluster: Pre-mRNA splicing factor RNA helicase P... 107 2e-22
UniRef50_A5K917 Cluster: DEAD/DEAH box helicase, putative; n=4; ... 107 2e-22
UniRef50_P0A9P8 Cluster: Cold-shock DEAD box protein A; n=54; Ga... 107 2e-22
UniRef50_Q9NY93 Cluster: Probable ATP-dependent RNA helicase DDX... 107 2e-22
UniRef50_Q4PDT1 Cluster: ATP-dependent RNA helicase DBP3; n=1; U... 107 2e-22
UniRef50_UPI00015B61D8 Cluster: PREDICTED: similar to vasa-like ... 107 3e-22
UniRef50_Q3EBD3 Cluster: DEAD-box ATP-dependent RNA helicase 41;... 107 3e-22
UniRef50_Q8GY84 Cluster: DEAD-box ATP-dependent RNA helicase 10;... 107 3e-22
UniRef50_Q8YXJ0 Cluster: ATP-dependent RNA helicase; n=11; Cyano... 106 4e-22
UniRef50_Q5FS73 Cluster: ATP-dependent RNA helicase; n=2; Glucon... 106 4e-22
UniRef50_Q01PH0 Cluster: DEAD/DEAH box helicase domain protein; ... 106 4e-22
UniRef50_Q54VF1 Cluster: Putative uncharacterized protein; n=1; ... 106 4e-22
UniRef50_Q86XP3 Cluster: ATP-dependent RNA helicase DDX42; n=47;... 106 4e-22
UniRef50_Q9BUQ8 Cluster: Probable ATP-dependent RNA helicase DDX... 106 4e-22
UniRef50_Q98RE0 Cluster: ATP-DEPENDENT RNA HELICASE; n=1; Mycopl... 106 5e-22
UniRef50_A6FEC9 Cluster: ATP-dependent RNA helicase, DEAD box fa... 106 5e-22
UniRef50_A1SQH8 Cluster: DEAD/DEAH box helicase domain protein p... 106 5e-22
UniRef50_Q5CP59 Cluster: DEAD box polypeptide, Y chromosome-rela... 106 5e-22
UniRef50_P09052 Cluster: ATP-dependent RNA helicase vasa; n=5; E... 106 5e-22
UniRef50_A5E6W6 Cluster: ATP-dependent rRNA helicase RRP3; n=4; ... 106 5e-22
UniRef50_Q5KNF8 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 106 5e-22
UniRef50_A4QTR1 Cluster: ATP-dependent RNA helicase DBP9; n=4; A... 106 5e-22
UniRef50_Q5NN72 Cluster: DNA and RNA helicase; n=3; Sphingomonad... 105 7e-22
UniRef50_Q480Z7 Cluster: ATP-dependent RNA helicase, DEAD box fa... 105 7e-22
UniRef50_Q31AC4 Cluster: DEAD/DEAH box helicase-like protein; n=... 105 7e-22
UniRef50_A4BBH5 Cluster: Probable ATP-dependent RNA helicase; n=... 105 7e-22
UniRef50_A1USG3 Cluster: DEAD/DEAH box helicase domain/helicase ... 105 7e-22
UniRef50_Q5BYH3 Cluster: SJCHGC05414 protein; n=1; Schistosoma j... 105 7e-22
UniRef50_Q49K88 Cluster: DEAD box RNA helicase; n=1; Toxoplasma ... 105 7e-22
UniRef50_P21507 Cluster: ATP-dependent RNA helicase srmB; n=82; ... 105 7e-22
UniRef50_P93008 Cluster: DEAD-box ATP-dependent RNA helicase 21;... 105 7e-22
UniRef50_Q4PFD9 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 105 7e-22
UniRef50_Q80Y44 Cluster: Probable ATP-dependent RNA helicase DDX... 105 7e-22
UniRef50_Q13206 Cluster: Probable ATP-dependent RNA helicase DDX... 105 7e-22
UniRef50_Q8A2K2 Cluster: ATP-dependent RNA helicase; n=10; cellu... 105 9e-22
UniRef50_Q4UBP8 Cluster: RNA helicase, putative; n=4; Eukaryota|... 105 9e-22
UniRef50_P42305 Cluster: ATP-dependent RNA helicase dbpA; n=9; F... 105 9e-22
UniRef50_Q81JK1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 105 1e-21
UniRef50_Q8I0W7 Cluster: Snrnp protein, putative; n=6; Plasmodiu... 105 1e-21
UniRef50_O22907 Cluster: DEAD-box ATP-dependent RNA helicase 24;... 105 1e-21
UniRef50_A5DU73 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 105 1e-21
UniRef50_Q9Y6V7 Cluster: Probable ATP-dependent RNA helicase DDX... 105 1e-21
UniRef50_A3TJG3 Cluster: ATP-dependent RNA helicase; n=5; Actino... 104 2e-21
UniRef50_Q2FKY7 Cluster: DEAD/DEAH box helicase-like; n=1; Metha... 104 2e-21
UniRef50_Q9P9G7 Cluster: DEAD-box RNA helicase; n=3; Methanosarc... 104 2e-21
UniRef50_Q03532 Cluster: ATP-dependent RNA helicase HAS1; n=70; ... 104 2e-21
UniRef50_Q9RKJ0 Cluster: ATP-dependent RNA helicase; n=2; Strept... 104 2e-21
UniRef50_Q5GRS8 Cluster: Superfamily II DNA/RNA helicase; n=4; W... 104 2e-21
UniRef50_Q28T45 Cluster: DEAD/DEAH box helicase-like protein; n=... 104 2e-21
UniRef50_Q4Q8D5 Cluster: ATP-dependent RNA helicase, putative; n... 104 2e-21
UniRef50_Q7S5R1 Cluster: ATP-dependent RNA helicase dbp-3; n=10;... 104 2e-21
UniRef50_UPI0000ECBDA5 Cluster: ATP-dependent RNA helicase DDX24... 103 3e-21
UniRef50_Q6AMK6 Cluster: Probable ATP-dependent RNA helicase; n=... 103 3e-21
UniRef50_Q1U8H0 Cluster: Helicase-like:DEAD/DEAH box helicase-li... 103 3e-21
UniRef50_A4AFV6 Cluster: ATP-dependent RNA helicase; n=3; Actino... 103 3e-21
UniRef50_A3I1F5 Cluster: DEAD/DEAH box helicase-like protein; n=... 103 3e-21
UniRef50_A5DUB2 Cluster: ATP-dependent RNA helicase MAK5; n=5; S... 103 3e-21
UniRef50_Q5T1V6 Cluster: Probable ATP-dependent RNA helicase DDX... 103 3e-21
UniRef50_UPI0000499ECF Cluster: DEAD/DEAH box helicase; n=1; Ent... 103 4e-21
UniRef50_Q8F0Q7 Cluster: ATP-dependent RNA helicase; n=4; Leptos... 103 4e-21
UniRef50_Q6F0U0 Cluster: ATP-dependent RNA helicase; n=1; Mesopl... 103 4e-21
UniRef50_Q6D2K3 Cluster: ATP-independent RNA helicase; n=6; Prot... 103 4e-21
UniRef50_A7P8T9 Cluster: Chromosome chr3 scaffold_8, whole genom... 103 4e-21
UniRef50_A4UCU0 Cluster: DEAD box polypeptide 47 isoform 1 varia... 103 4e-21
UniRef50_Q2GSC7 Cluster: Putative uncharacterized protein; n=6; ... 103 4e-21
UniRef50_Q9H0S4 Cluster: Probable ATP-dependent RNA helicase DDX... 103 4e-21
UniRef50_Q2H2J1 Cluster: ATP-dependent RNA helicase DBP4; n=14; ... 103 4e-21
UniRef50_UPI000155CE2F Cluster: PREDICTED: similar to R27090_2; ... 103 5e-21
UniRef50_Q3SF48 Cluster: DEAD/DEAH box helicase; n=6; cellular o... 103 5e-21
UniRef50_Q03GJ4 Cluster: Superfamily II DNA and RNA helicase; n=... 103 5e-21
UniRef50_A5CVQ6 Cluster: ATP-dependent RNA helicase DeaD; n=2; s... 103 5e-21
UniRef50_A0M3C7 Cluster: RhlE-like DEAD box family ATP-dependent... 103 5e-21
UniRef50_Q7R0K7 Cluster: GLP_154_39979_41331; n=1; Giardia lambl... 103 5e-21
UniRef50_Q4JG17 Cluster: Vasa-like protein; n=1; Litopenaeus van... 103 5e-21
UniRef50_A0RUV7 Cluster: Superfamily II helicase; n=3; Thermopro... 103 5e-21
UniRef50_A4RK80 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 103 5e-21
UniRef50_Q32LU9 Cluster: LOC562123 protein; n=3; Danio rerio|Rep... 102 7e-21
UniRef50_Q26CN9 Cluster: ATP-dependent RNA helicase; n=1; Flavob... 102 7e-21
UniRef50_Q7R3S1 Cluster: GLP_82_62372_60057; n=1; Giardia lambli... 102 7e-21
UniRef50_Q5CWD0 Cluster: Prp5p C terminal KH. eIF4A-1-family RNA... 102 7e-21
UniRef50_Q4P7Y2 Cluster: Putative uncharacterized protein; n=1; ... 102 7e-21
UniRef50_UPI0000D57716 Cluster: PREDICTED: similar to CG9143-PA;... 102 9e-21
UniRef50_Q8D3Y6 Cluster: ATP-dependent RNA helicase, DEAD box fa... 102 9e-21
UniRef50_O07897 Cluster: Heat resistant RNA dependent ATPase; n=... 102 9e-21
UniRef50_A6T3R2 Cluster: ATP-dependent RNA helicase; n=52; cellu... 102 9e-21
UniRef50_A4C6L9 Cluster: ATP-dependent RNA helicase, DEAD box fa... 102 9e-21
UniRef50_Q4UBV5 Cluster: DEAD-box family (RNA) helicase, putativ... 102 9e-21
UniRef50_A4IBK1 Cluster: ATP-dependent RNA helicase, putative; n... 102 9e-21
UniRef50_Q9LUW5 Cluster: DEAD-box ATP-dependent RNA helicase 53;... 102 9e-21
UniRef50_A6VWX2 Cluster: DEAD/DEAH box helicase domain protein; ... 101 1e-20
UniRef50_Q4UA43 Cluster: DEAD-family helicase, putative; n=3; Pi... 101 1e-20
UniRef50_Q4U8S0 Cluster: DEAD-box family helicase, putative; n=2... 101 1e-20
UniRef50_Q2PZC2 Cluster: Vasa protein; n=3; Apidae|Rep: Vasa pro... 101 1e-20
UniRef50_A7AWZ5 Cluster: DEAD/DEAH box helicase and helicase con... 101 1e-20
UniRef50_Q9C551 Cluster: DEAD-box ATP-dependent RNA helicase 5; ... 101 1e-20
UniRef50_Q1DMX8 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 101 1e-20
UniRef50_Q58083 Cluster: Probable ATP-dependent RNA helicase MJ0... 101 1e-20
UniRef50_Q92GV2 Cluster: ATP-dependent RNA helicase RhlE; n=10; ... 101 2e-20
UniRef50_Q0TQ86 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 101 2e-20
UniRef50_Q0S0C5 Cluster: Possible ATP-dependent RNA helicase; n=... 101 2e-20
UniRef50_A7JLA3 Cluster: ATP-dependent RNA helicase; n=20; Franc... 101 2e-20
UniRef50_Q675R0 Cluster: ATP-dependent 61 kDa nucleolar RNA heli... 101 2e-20
UniRef50_Q14240 Cluster: Eukaryotic initiation factor 4A-II; n=3... 101 2e-20
UniRef50_Q10202 Cluster: ATP-dependent RNA helicase dbp3; n=1; S... 101 2e-20
UniRef50_Q4T821 Cluster: Chromosome undetermined SCAF7914, whole... 101 2e-20
UniRef50_Q89M45 Cluster: ATP-dependent RNA helicase; n=29; cellu... 101 2e-20
UniRef50_Q87HW1 Cluster: ATP-dependent RNA helicase, DEAD box fa... 101 2e-20
UniRef50_Q725W5 Cluster: ATP-dependent RNA helicase, DEAD/DEAH f... 101 2e-20
UniRef50_Q2Z064 Cluster: Probable ATP-dependent RNA helicase; n=... 101 2e-20
UniRef50_A0DK92 Cluster: Chromosome undetermined scaffold_54, wh... 101 2e-20
UniRef50_Q9SB89 Cluster: DEAD-box ATP-dependent RNA helicase 27;... 101 2e-20
UniRef50_Q5K7L2 Cluster: ATP-dependent RNA helicase DBP9; n=1; F... 101 2e-20
UniRef50_Q9KKW0 Cluster: ATP-dependent RNA helicase, DEAD box fa... 100 3e-20
UniRef50_Q1QYG3 Cluster: DEAD/DEAH box helicase-like protein; n=... 100 3e-20
UniRef50_Q9LKL6 Cluster: DEAD box protein P68; n=5; Viridiplanta... 100 3e-20
UniRef50_Q88NB7 Cluster: ATP-dependent RNA helicase rhlB; n=18; ... 100 3e-20
UniRef50_Q9HXE5 Cluster: ATP-dependent RNA helicase rhlB; n=22; ... 100 3e-20
UniRef50_Q8D563 Cluster: Superfamily II DNA and RNA helicase; n=... 100 4e-20
UniRef50_Q893G8 Cluster: ATP-dependent RNA helicase; n=4; Clostr... 100 4e-20
UniRef50_Q6A841 Cluster: Putative ATP-dependent RNA helicase; n=... 100 4e-20
UniRef50_A6Q8Y9 Cluster: ATP-dependent RNA helicase, DEAD-box fa... 100 4e-20
UniRef50_A6H0L1 Cluster: Probable ATP-dependent RNA helicase, DE... 100 4e-20
UniRef50_Q9GNP1 Cluster: Vasa homolog; n=18; Eumetazoa|Rep: Vasa... 100 4e-20
UniRef50_Q9SF41 Cluster: DEAD-box ATP-dependent RNA helicase 45;... 100 4e-20
UniRef50_Q5JKF2 Cluster: DEAD-box ATP-dependent RNA helicase 40;... 100 4e-20
UniRef50_A2XVF7 Cluster: DEAD-box ATP-dependent RNA helicase 13;... 100 4e-20
UniRef50_Q8SRB2 Cluster: ATP-dependent RNA helicase DBP2; n=103;... 100 4e-20
UniRef50_Q6A6U7 Cluster: ATP-dependent RNA helicase; n=3; Actino... 99 5e-20
UniRef50_Q03AA2 Cluster: Superfamily II DNA and RNA helicase; n=... 99 5e-20
UniRef50_Q4QFH1 Cluster: ATP-dependent RNA helicase, putative; n... 99 5e-20
UniRef50_A7APE7 Cluster: DEAD/DEAH box helicase domain containin... 99 5e-20
UniRef50_Q7S6F3 Cluster: ATP-dependent RNA helicase dbp-9; n=14;... 99 5e-20
UniRef50_UPI00006CDDA3 Cluster: CLN3 protein; n=1; Tetrahymena t... 100 6e-20
UniRef50_A4RW46 Cluster: Predicted protein; n=2; Ostreococcus|Re... 100 6e-20
UniRef50_O26305 Cluster: ATP-dependent RNA helicase, eIF-4A fami... 100 6e-20
UniRef50_Q9PA24 Cluster: ATP-dependent RNA helicase rhlB; n=87; ... 100 6e-20
UniRef50_Q8H0U8 Cluster: DEAD-box ATP-dependent RNA helicase 42;... 100 6e-20
UniRef50_Q5KJI2 Cluster: ATP-dependent RNA helicase DHH1; n=4; D... 100 6e-20
UniRef50_Q5ZT20 Cluster: ATP-dependent RNA helicase; n=4; Legion... 99 8e-20
UniRef50_Q0S0C7 Cluster: ATP-dependent RNA helicase; n=5; Actino... 99 8e-20
UniRef50_A7BCL2 Cluster: Putative uncharacterized protein; n=1; ... 99 8e-20
UniRef50_A1U3D6 Cluster: DEAD/DEAH box helicase domain protein; ... 99 8e-20
UniRef50_A5BHG9 Cluster: Putative uncharacterized protein; n=1; ... 99 8e-20
UniRef50_A4S507 Cluster: Predicted protein; n=2; Ostreococcus|Re... 99 8e-20
UniRef50_A4S3A0 Cluster: Predicted protein; n=2; Ostreococcus|Re... 99 8e-20
UniRef50_A4S107 Cluster: Predicted protein; n=1; Ostreococcus lu... 99 8e-20
UniRef50_Q1VL45 Cluster: DEAD/DEAH box helicase-like protein; n=... 99 1e-19
UniRef50_Q14NT1 Cluster: Putative atp-dependent rna helicase pro... 99 1e-19
UniRef50_A6DK15 Cluster: ATP-dependent RNA helicase, specific fo... 99 1e-19
UniRef50_A0V009 Cluster: DEAD/DEAH box helicase-like; n=1; Clost... 99 1e-19
UniRef50_A0K1H7 Cluster: DEAD/DEAH box helicase domain protein; ... 99 1e-19
UniRef50_Q7QQX6 Cluster: GLP_383_7421_6129; n=1; Giardia lamblia... 99 1e-19
UniRef50_Q4W7T7 Cluster: VASA RNA helicase; n=3; Daphniidae|Rep:... 99 1e-19
UniRef50_Q96XQ7 Cluster: 337aa long hypothetical ATP-dependent R... 99 1e-19
UniRef50_P38712 Cluster: ATP-dependent rRNA helicase RRP3; n=6; ... 99 1e-19
UniRef50_Q5NZY2 Cluster: ATP-dependent RNA helicase DeaD; n=18; ... 98 1e-19
UniRef50_Q4IZ16 Cluster: DEAD/DEAH box helicase:Helicase, C-term... 98 1e-19
UniRef50_Q18W60 Cluster: DEAD/DEAH box helicase-like; n=2; Desul... 98 1e-19
UniRef50_A6DML6 Cluster: ATP-dependent RNA helicase; n=1; Lentis... 98 1e-19
UniRef50_Q9VXW2 Cluster: CG6227-PA; n=11; Coelomata|Rep: CG6227-... 98 1e-19
UniRef50_A2DP01 Cluster: DEAD/DEAH box helicase family protein; ... 98 1e-19
UniRef50_Q2NEZ7 Cluster: Predicted helicase; n=6; cellular organ... 98 1e-19
UniRef50_Q966L9 Cluster: ATP-dependent RNA helicase glh-2; n=4; ... 98 1e-19
UniRef50_UPI0001509DC1 Cluster: DEAD/DEAH box helicase family pr... 98 2e-19
UniRef50_A0LD66 Cluster: DEAD/DEAH box helicase domain protein; ... 98 2e-19
UniRef50_Q9VRI0 Cluster: CG1666-PA; n=22; Eumetazoa|Rep: CG1666-... 98 2e-19
UniRef50_Q9Y7T7 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 98 2e-19
UniRef50_Q8SR01 Cluster: ATP-dependent RNA helicase DBP4; n=1; E... 98 2e-19
UniRef50_UPI0001509D93 Cluster: DEAD/DEAH box helicase family pr... 97 2e-19
UniRef50_UPI0000499D6F Cluster: DEAD/DEAH box helicase; n=1; Ent... 97 2e-19
UniRef50_Q6MBR0 Cluster: Putative ATP-dependent RNA helicase; n=... 97 2e-19
UniRef50_Q965K2 Cluster: Putative uncharacterized protein; n=2; ... 97 2e-19
UniRef50_Q65XX1 Cluster: Vasa-and belle-like helicase protein 1,... 97 2e-19
UniRef50_Q6C024 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 97 2e-19
UniRef50_Q4PEX7 Cluster: ATP-dependent RNA helicase DBP8; n=1; U... 97 2e-19
UniRef50_UPI00015B617E Cluster: PREDICTED: hypothetical protein;... 97 3e-19
UniRef50_Q5QVE4 Cluster: ATP-dependent RNA helicase; n=2; Idioma... 97 3e-19
UniRef50_Q1WSN6 Cluster: ATP-dependent RNA helicase; n=1; Lactob... 97 3e-19
UniRef50_Q11UI8 Cluster: DEAD box-related helicase; n=3; Sphingo... 97 3e-19
UniRef50_A6W6A7 Cluster: DEAD/DEAH box helicase domain protein; ... 97 3e-19
UniRef50_A6VX62 Cluster: DEAD/DEAH box helicase domain protein; ... 97 3e-19
UniRef50_A4B5L7 Cluster: ATP-dependent RNA helicase DbpA; n=3; P... 97 3e-19
UniRef50_A7SE71 Cluster: Predicted protein; n=1; Nematostella ve... 97 3e-19
UniRef50_Q5KPU1 Cluster: ATP-dependent RNA helicase DBP8; n=2; F... 97 3e-19
UniRef50_UPI00015B6103 Cluster: PREDICTED: similar to CG8611-PB;... 97 4e-19
UniRef50_O34750 Cluster: YfmL protein; n=5; Bacillus|Rep: YfmL p... 97 4e-19
UniRef50_A4J5M3 Cluster: DEAD/DEAH box helicase domain protein; ... 97 4e-19
UniRef50_A1UCR5 Cluster: DEAD/DEAH box helicase domain protein; ... 97 4e-19
UniRef50_Q01EH4 Cluster: Ddx49 Ddx49-related DEAD box helicase s... 97 4e-19
UniRef50_Q388E8 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 97 4e-19
UniRef50_A7RY08 Cluster: Predicted protein; n=2; Eukaryota|Rep: ... 97 4e-19
UniRef50_A2ED04 Cluster: DEAD/DEAH box helicase family protein; ... 97 4e-19
UniRef50_Q97WT0 Cluster: ATP-dependent RNA helicase; n=4; Sulfol... 97 4e-19
UniRef50_Q6MQY6 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 96 6e-19
UniRef50_A4BET4 Cluster: DEAD/DEAH box helicase-like protein; n=... 96 6e-19
UniRef50_A7RHS2 Cluster: Predicted protein; n=1; Nematostella ve... 96 6e-19
UniRef50_Q6CZD9 Cluster: ATP-dependent RNA helicase rhlB; n=2; G... 96 6e-19
UniRef50_Q11039 Cluster: Cold-shock DEAD box protein A homolog; ... 96 6e-19
UniRef50_P44586 Cluster: Cold-shock DEAD box protein A homolog; ... 96 6e-19
UniRef50_Q835K0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 96 8e-19
UniRef50_Q3AX69 Cluster: DEAD/DEAH box helicase-like; n=15; Cyan... 96 8e-19
UniRef50_Q2J6D3 Cluster: DEAD/DEAH box helicase-like; n=2; Frank... 96 8e-19
UniRef50_A2D755 Cluster: DEAD/DEAH box helicase family protein; ... 96 8e-19
UniRef50_Q9SQV1 Cluster: Probable DEAD-box ATP-dependent RNA hel... 96 8e-19
UniRef50_Q9UTP9 Cluster: ATP-dependent RNA helicase dbp4; n=1; S... 96 8e-19
UniRef50_Q81RE0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 95 1e-18
UniRef50_Q7VQL9 Cluster: Cold-shock DEAD-box protein A, inducibl... 95 1e-18
UniRef50_Q62J95 Cluster: ATP-dependent RNA helicase RhlE, putati... 95 1e-18
UniRef50_Q93382 Cluster: Putative uncharacterized protein; n=2; ... 95 1e-18
UniRef50_Q86IZ9 Cluster: Similar to Rattus norvegicus (Rat). ROK... 95 1e-18
UniRef50_Q7PDQ7 Cluster: Similar ATP-dependent RNA Helicase; n=2... 95 1e-18
UniRef50_Q4YV55 Cluster: RNA helicase , putative; n=4; Plasmodiu... 95 1e-18
UniRef50_A2EQ41 Cluster: DEAD/DEAH box helicase family protein; ... 95 1e-18
UniRef50_Q9NXZ2 Cluster: Probable ATP-dependent RNA helicase DDX... 95 1e-18
UniRef50_UPI000049A17D Cluster: helicase; n=1; Entamoeba histoly... 95 1e-18
UniRef50_UPI00004992E6 Cluster: DEAD/DEAH box helicase; n=3; Ent... 95 1e-18
UniRef50_Q1Q4V2 Cluster: Similar to ATP-independent RNA helicase... 95 1e-18
UniRef50_A6TX49 Cluster: DEAD/DEAH box helicase domain protein; ... 95 1e-18
UniRef50_A6GSW1 Cluster: Putative ATP-dependent RNA helicase; n=... 95 1e-18
UniRef50_A2SJY2 Cluster: Putative ATP-dependent RNA helicase; n=... 95 1e-18
UniRef50_Q8MZI3 Cluster: GH10652p; n=2; Drosophila melanogaster|... 95 1e-18
UniRef50_A0C015 Cluster: Chromosome undetermined scaffold_14, wh... 95 1e-18
UniRef50_UPI00015B4D43 Cluster: PREDICTED: hypothetical protein;... 95 2e-18
UniRef50_UPI00004994C0 Cluster: DEAD/DEAH box helicase; n=2; Ent... 95 2e-18
UniRef50_Q7UNV7 Cluster: ATP-dependent RNA helicase; n=2; Planct... 95 2e-18
UniRef50_A5FH33 Cluster: DEAD/DEAH box helicase domain protein; ... 95 2e-18
UniRef50_A0JYP4 Cluster: DEAD/DEAH box helicase domain protein; ... 95 2e-18
UniRef50_Q7QP86 Cluster: GLP_397_1016_18; n=1; Giardia lamblia A... 95 2e-18
UniRef50_Q4Q1N9 Cluster: DEAD box RNA helicase, putative; n=5; T... 95 2e-18
UniRef50_A6RW79 Cluster: Putative uncharacterized protein; n=1; ... 95 2e-18
UniRef50_Q56XG6 Cluster: DEAD-box ATP-dependent RNA helicase 15;... 95 2e-18
UniRef50_Q4P7M1 Cluster: ATP-dependent RNA helicase DBP9; n=2; U... 95 2e-18
UniRef50_UPI0000566899 Cluster: UPI0000566899 related cluster; n... 94 2e-18
UniRef50_Q4RK69 Cluster: Chromosome 2 SCAF15032, whole genome sh... 94 2e-18
UniRef50_Q0HLM7 Cluster: DEAD/DEAH box helicase domain protein; ... 94 2e-18
UniRef50_A3JG19 Cluster: ATP-dependent RNA helicase; n=1; Marino... 94 2e-18
UniRef50_Q019E9 Cluster: ATP-dependent RNA helicase; n=2; Ostreo... 94 2e-18
UniRef50_Q54CB8 Cluster: Putative uncharacterized protein; n=1; ... 94 2e-18
UniRef50_A2G6R5 Cluster: DEAD/DEAH box helicase family protein; ... 94 2e-18
UniRef50_Q0CMM5 Cluster: Putative uncharacterized protein; n=2; ... 94 2e-18
UniRef50_Q0D622 Cluster: DEAD-box ATP-dependent RNA helicase 32;... 94 2e-18
UniRef50_UPI00015B5BD1 Cluster: PREDICTED: similar to RE48840p; ... 94 3e-18
UniRef50_UPI00015B5BA9 Cluster: PREDICTED: similar to RE48840p; ... 94 3e-18
UniRef50_Q6KI10 Cluster: DEAD-box ATP-dependent RNA helicase; n=... 94 3e-18
UniRef50_Q2BIX8 Cluster: Probable ATP-dependent RNA helicase; n=... 94 3e-18
UniRef50_Q8IL21 Cluster: RNA helicase, putative; n=2; Plasmodium... 94 3e-18
UniRef50_Q1AG34 Cluster: Ded1-like DEAD-box RNA helicase; n=1; C... 94 3e-18
UniRef50_P91340 Cluster: Putative uncharacterized protein; n=3; ... 94 3e-18
UniRef50_A7RKF5 Cluster: Predicted protein; n=1; Nematostella ve... 94 3e-18
UniRef50_A3H9E9 Cluster: DEAD/DEAH box helicase-like; n=1; Caldi... 94 3e-18
UniRef50_Q9LYJ9 Cluster: DEAD-box ATP-dependent RNA helicase 46;... 94 3e-18
UniRef50_Q0E3X4 Cluster: DEAD-box ATP-dependent RNA helicase 35A... 94 3e-18
UniRef50_Q4IP34 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 94 3e-18
UniRef50_Q6BLU9 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 94 3e-18
UniRef50_Q750Q4 Cluster: ATP-dependent RNA helicase MSS116, mito... 94 3e-18
UniRef50_Q9NUL7 Cluster: Probable ATP-dependent RNA helicase DDX... 94 3e-18
UniRef50_Q9RXH8 Cluster: ATP-dependent RNA helicase, putative; n... 93 4e-18
UniRef50_Q7MT81 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 93 4e-18
UniRef50_Q6NHC6 Cluster: Putative RNA helicase; n=2; Corynebacte... 93 4e-18
UniRef50_A1G315 Cluster: DEAD/DEAH box helicase-like; n=2; Salin... 93 4e-18
UniRef50_A0UX17 Cluster: DEAD/DEAH box helicase-like; n=5; Clost... 93 4e-18
UniRef50_O97032 Cluster: DjVLGB; n=2; Dugesia|Rep: DjVLGB - Duge... 93 4e-18
UniRef50_Q9FFT9 Cluster: Probable DEAD-box ATP-dependent RNA hel... 93 4e-18
UniRef50_Q9VHP0 Cluster: ATP-dependent RNA helicase bel; n=4; Pr... 93 4e-18
UniRef50_UPI000051A2EE Cluster: PREDICTED: similar to Helicase C... 93 5e-18
UniRef50_Q5VQL1-2 Cluster: Isoform 2 of Q5VQL1 ; n=2; Magnolioph... 93 5e-18
UniRef50_A1VA48 Cluster: DEAD/DEAH box helicase domain protein; ... 93 5e-18
UniRef50_A4S6F2 Cluster: Predicted protein; n=1; Ostreococcus lu... 93 5e-18
UniRef50_Q7QUN8 Cluster: GLP_47_37459_39102; n=1; Giardia lambli... 93 5e-18
UniRef50_Q4JF01 Cluster: Vasa homlogue; n=2; Eukaryota|Rep: Vasa... 93 5e-18
UniRef50_Q59H21 Cluster: ATP-dependent RNA helicase ROK1 isoform... 93 5e-18
UniRef50_A4RBW7 Cluster: Putative uncharacterized protein; n=4; ... 93 5e-18
UniRef50_A5E058 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 93 5e-18
UniRef50_Q8SQK9 Cluster: ATP-dependent RNA helicase DHH1; n=1; E... 93 5e-18
UniRef50_Q9Y2R4 Cluster: Probable ATP-dependent RNA helicase DDX... 93 5e-18
UniRef50_Q07886 Cluster: Probable ATP-dependent RNA helicase Dbp... 93 5e-18
UniRef50_UPI00015A4B44 Cluster: DEAD (Asp-Glu-Ala-Asp) box polyp... 93 7e-18
UniRef50_Q11QF9 Cluster: Inducible ATP-independent RNA helicase;... 93 7e-18
UniRef50_A2TP65 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 93 7e-18
UniRef50_Q7QNT5 Cluster: GLP_88_2286_3572; n=1; Giardia lamblia ... 93 7e-18
UniRef50_A7RGX3 Cluster: Predicted protein; n=3; Eukaryota|Rep: ... 93 7e-18
UniRef50_A7ARY5 Cluster: DEAD/DEAH box helicase protein family; ... 93 7e-18
UniRef50_Q8SR63 Cluster: ATP-dependent rRNA helicase RRP3; n=1; ... 93 7e-18
UniRef50_Q6K7R9 Cluster: DEAD-box ATP-dependent RNA helicase 48;... 93 7e-18
UniRef50_Q10RI7 Cluster: DEAD-box ATP-dependent RNA helicase 38;... 93 7e-18
UniRef50_UPI000023DE12 Cluster: hypothetical protein FG05108.1; ... 92 9e-18
UniRef50_Q1J0S9 Cluster: DEAD/DEAH box helicase-like protein; n=... 92 9e-18
UniRef50_Q9VX34 Cluster: CG5800-PA; n=2; Sophophora|Rep: CG5800-... 92 9e-18
UniRef50_A7TRT2 Cluster: Putative uncharacterized protein; n=1; ... 92 9e-18
UniRef50_Q9M2F9 Cluster: DEAD-box ATP-dependent RNA helicase 52;... 92 9e-18
UniRef50_Q0UN57 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 92 9e-18
UniRef50_Q754U8 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 92 9e-18
UniRef50_Q9VHU1 Cluster: Probable ATP-dependent RNA helicase DDX... 92 9e-18
UniRef50_Q03YT1 Cluster: Superfamily II DNA and RNA helicase; n=... 92 1e-17
UniRef50_A4B385 Cluster: ATP-dependent RNA helicase, DEAD box fa... 92 1e-17
UniRef50_A2U1Q9 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 92 1e-17
UniRef50_Q4N7J8 Cluster: DEAD box RNA helicase, putative; n=2; T... 92 1e-17
UniRef50_Q4N4Z2 Cluster: ATP-dependent RNA helicase, putative; n... 92 1e-17
UniRef50_Q13838 Cluster: Spliceosome RNA helicase BAT1; n=55; Eu... 92 1e-17
UniRef50_Q9NVP1 Cluster: ATP-dependent RNA helicase DDX18; n=24;... 92 1e-17
UniRef50_Q88XN5 Cluster: ATP-dependent RNA helicase; n=2; Lactob... 91 2e-17
UniRef50_Q5QY63 Cluster: ATP-dependent RNA helicase; n=3; Altero... 91 2e-17
UniRef50_A6DL95 Cluster: Probable ATP-dependent RNA helicase; n=... 91 2e-17
UniRef50_Q015I7 Cluster: ATP-dependent RNA helicase; n=2; Ostreo... 91 2e-17
UniRef50_P19109 Cluster: ATP-dependent RNA helicase p62; n=9; Eu... 91 2e-17
UniRef50_Q9P7C7 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 91 2e-17
UniRef50_Q9DF36 Cluster: RNA helicase II/Gu; n=9; Tetrapoda|Rep:... 91 2e-17
UniRef50_Q4S1T3 Cluster: Chromosome undetermined SCAF14764, whol... 91 2e-17
UniRef50_Q1IMK6 Cluster: DEAD/DEAH box helicase-like; n=1; Acido... 91 2e-17
UniRef50_Q55BR9 Cluster: Putative uncharacterized protein; n=1; ... 91 2e-17
UniRef50_A2DHK0 Cluster: DEAD/DEAH box helicase family protein; ... 91 2e-17
UniRef50_Q5KME7 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 91 2e-17
UniRef50_Q0U6X2 Cluster: ATP-dependent RNA helicase MAK5; n=2; P... 91 2e-17
UniRef50_P20449 Cluster: ATP-dependent RNA helicase DBP5; n=23; ... 91 2e-17
UniRef50_A6TUK6 Cluster: DEAD/DEAH box helicase domain protein; ... 91 3e-17
>UniRef50_UPI0000DB7667 Cluster: PREDICTED: similar to CG32344-PA;
n=1; Apis mellifera|Rep: PREDICTED: similar to
CG32344-PA - Apis mellifera
Length = 743
Score = 226 bits (553), Expect = 3e-58
Identities = 109/159 (68%), Positives = 132/159 (83%)
Frame = +3
Query: 183 SGAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPI 362
SG FQSM LSFP+LKGI KRGYK PTPIQRKTIP+AL G+D+VAMARTGSGKTACF++P+
Sbjct: 35 SGGFQSMALSFPILKGILKRGYKIPTPIQRKTIPLALEGRDIVAMARTGSGKTACFLIPL 94
Query: 363 LEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQF 542
EKL + K RALILSPTRELALQTL+F++ELG+FTGL + ILGG+++E QF
Sbjct: 95 FEKLKIRQAK----VGARALILSPTRELALQTLKFIKELGRFTGLKATIILGGDNMENQF 150
Query: 543 NVMSGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
+ + G +PDI++ATPGRFLHICIEM L+L+NI VVFDE
Sbjct: 151 SAIHG-NPDILIATPGRFLHICIEMDLQLNNIEYVVFDE 188
>UniRef50_UPI00015B5D7B Cluster: PREDICTED: similar to LD28101p;
n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
LD28101p - Nasonia vitripennis
Length = 782
Score = 217 bits (531), Expect = 1e-55
Identities = 107/159 (67%), Positives = 128/159 (80%)
Frame = +3
Query: 183 SGAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPI 362
SG FQSMGLS V++GI KRGYK PTPIQRKTIPIAL G+DVVAMARTGSGKTACF++P+
Sbjct: 37 SGGFQSMGLSQSVIRGILKRGYKIPTPIQRKTIPIALDGRDVVAMARTGSGKTACFLIPM 96
Query: 363 LEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQF 542
EKL K RALILSPTRELALQT RF++E+G+FTGL S+ ILGG+S++ QF
Sbjct: 97 FEKLKTRQAK----TGARALILSPTRELALQTQRFIKEIGRFTGLKSSVILGGDSMDNQF 152
Query: 543 NVMSGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
+ + G +PDI+VATPGRFLHICIEM + L +I V+FDE
Sbjct: 153 SAIHG-NPDIIVATPGRFLHICIEMDMNLKSIEFVIFDE 190
>UniRef50_Q8SY39 Cluster: LD28101p; n=3; Diptera|Rep: LD28101p -
Drosophila melanogaster (Fruit fly)
Length = 827
Score = 215 bits (524), Expect = 1e-54
Identities = 108/194 (55%), Positives = 138/194 (71%), Gaps = 4/194 (2%)
Frame = +3
Query: 90 KELDDHLPGFDAPKADXXXXXXXXXXXXXXS----SGAFQSMGLSFPVLKGITKRGYKQP 257
K+ D +PGF + D S SG FQSMGL F ++KGITKRGYK P
Sbjct: 3 KKQADEIPGFPSLDNDAGTSDRGADILKSKSKKNKSGGFQSMGLGFELIKGITKRGYKVP 62
Query: 258 TPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPT 437
TPIQRKTIP+ L G+DVVAMA+TGSGKTACF++P+ EKL + P K RALILSPT
Sbjct: 63 TPIQRKTIPLILEGRDVVAMAKTGSGKTACFLIPLFEKL----QRREPTKGARALILSPT 118
Query: 438 RELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVMSGSSPDIVVATPGRFLHICIEM 617
RELA+QT +F++ELG+F L S +LGG+S++ QF+ + + PD++VATPGRFLH+C+EM
Sbjct: 119 RELAVQTYKFIKELGRFMELKSILVLGGDSMDSQFSAIH-TCPDVIVATPGRFLHLCVEM 177
Query: 618 SLKLDNIXIVVFDE 659
LKL++I VVFDE
Sbjct: 178 DLKLNSIEYVVFDE 191
>UniRef50_Q8TDD1 Cluster: ATP-dependent RNA helicase DDX54; n=45;
Eukaryota|Rep: ATP-dependent RNA helicase DDX54 - Homo
sapiens (Human)
Length = 881
Score = 213 bits (521), Expect = 2e-54
Identities = 104/159 (65%), Positives = 126/159 (79%)
Frame = +3
Query: 183 SGAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPI 362
SG FQSMGLS+PV KGI K+GYK PTPIQRKTIP+ L GKDVVAMARTGSGKTACF+LP+
Sbjct: 95 SGGFQSMGLSYPVFKGIMKKGYKVPTPIQRKTIPVILDGKDVVAMARTGSGKTACFLLPM 154
Query: 363 LEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQF 542
E+L + + RALILSPTRELALQTL+F +ELGKFTGL +A ILGG+ +E QF
Sbjct: 155 FERLKTHSAQ----TGARALILSPTRELALQTLKFTKELGKFTGLKTALILGGDRMEDQF 210
Query: 543 NVMSGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
+ +PDI++ATPGR +H+ +EMSLKL ++ VVFDE
Sbjct: 211 AALH-ENPDIIIATPGRLVHVAVEMSLKLQSVEYVVFDE 248
>UniRef50_UPI0001555979 Cluster: PREDICTED: similar to ATP-dependent
RNA helicase; n=1; Ornithorhynchus anatinus|Rep:
PREDICTED: similar to ATP-dependent RNA helicase -
Ornithorhynchus anatinus
Length = 580
Score = 208 bits (508), Expect = 9e-53
Identities = 100/159 (62%), Positives = 124/159 (77%)
Frame = +3
Query: 183 SGAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPI 362
SG FQSMGLS+PV KG+ K+GYK PTPIQRKTIP+ L GKDVVAMARTGSGKTACF++P+
Sbjct: 149 SGGFQSMGLSYPVFKGVMKKGYKVPTPIQRKTIPVILDGKDVVAMARTGSGKTACFLIPM 208
Query: 363 LEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQF 542
EKL + + RAL+LSPTRELALQT +F +ELGKFTGL A ILGG+ +E QF
Sbjct: 209 FEKLKAHSAQ----AGARALVLSPTRELALQTGKFTKELGKFTGLKMALILGGDRMEDQF 264
Query: 543 NVMSGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
+ +PDI++ATPGR +H+ +EM+LKL ++ VVFDE
Sbjct: 265 AALH-ENPDIIIATPGRLMHVAVEMNLKLQSVEYVVFDE 302
>UniRef50_Q4SJI2 Cluster: Chromosome 4 SCAF14575, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 4 SCAF14575, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 532
Score = 205 bits (501), Expect = 6e-52
Identities = 99/159 (62%), Positives = 123/159 (77%)
Frame = +3
Query: 183 SGAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPI 362
SG FQSMGLSFPV KG+ ++GYK PTPIQRKTIP+ L GKDVVAMARTGSGKTA F++P+
Sbjct: 36 SGGFQSMGLSFPVFKGVMRKGYKVPTPIQRKTIPVILDGKDVVAMARTGSGKTAAFLIPM 95
Query: 363 LEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQF 542
E+L P + RALILSPTRELALQT++F +ELGKFT L +A ILGG+S++ QF
Sbjct: 96 FERLKAPQAQ----TGARALILSPTRELALQTMKFTKELGKFTKLKTALILGGDSMDDQF 151
Query: 543 NVMSGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
+ +PDI++ TPGR +H+ EM+LKL N+ VVFDE
Sbjct: 152 AALH-ENPDIIIGTPGRLMHVIKEMNLKLQNVEYVVFDE 189
>UniRef50_Q16W98 Cluster: DEAD box ATP-dependent RNA helicase; n=1;
Aedes aegypti|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 784
Score = 198 bits (484), Expect = 7e-50
Identities = 99/187 (52%), Positives = 126/187 (67%), Gaps = 3/187 (1%)
Frame = +3
Query: 108 LPGFDAPKADXXXXXXXXXXXXXXSS---GAFQSMGLSFPVLKGITKRGYKQPTPIQRKT 278
LPGF AD G FQ+MGLS P+LK I K GYK PTPIQRKT
Sbjct: 9 LPGFSIENADLDFDDDDDVSGKKGKKKKGGGFQAMGLSMPILKAILKMGYKVPTPIQRKT 68
Query: 279 IPIALTGKDVVAMARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQT 458
IP+ L G+DVVAMA+TGSGKT CF++P+ EKL K RAL+L+PTRELA+QT
Sbjct: 69 IPLILEGRDVVAMAKTGSGKTGCFLIPLFEKLKQREIK----SGARALVLTPTRELAIQT 124
Query: 459 LRFVRELGKFTGLTSAAILGGESIEQQFNVMSGSSPDIVVATPGRFLHICIEMSLKLDNI 638
+F+++LGKFT L + +LGG+S++ QF + + PDI+VATPGRFLH+C+EM LKL ++
Sbjct: 125 FKFIKQLGKFTDLKTILVLGGDSMDSQFAAIH-TLPDIIVATPGRFLHLCVEMDLKLSSV 183
Query: 639 XIVVFDE 659
VFDE
Sbjct: 184 QYCVFDE 190
>UniRef50_Q6C7X8 Cluster: ATP-dependent RNA helicase DBP10; n=3;
Saccharomycetales|Rep: ATP-dependent RNA helicase DBP10
- Yarrowia lipolytica (Candida lipolytica)
Length = 926
Score = 186 bits (453), Expect = 4e-46
Identities = 94/160 (58%), Positives = 121/160 (75%)
Frame = +3
Query: 180 SSGAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLP 359
SSG+F +GLS VLK I ++G+KQPTPIQRKTIP+ L GKDVV MARTGSGKTA FVLP
Sbjct: 100 SSGSFAGLGLSQLVLKNIARKGFKQPTPIQRKTIPLVLEGKDVVGMARTGSGKTAAFVLP 159
Query: 360 ILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQ 539
+LEKL V + K RA+ILSP+RELALQTL+ V++ T L A ++GG+S+E+Q
Sbjct: 160 MLEKLKVHSAK----VGARAVILSPSRELALQTLKVVKDFSAGTDLRLAMLVGGDSLEEQ 215
Query: 540 FNVMSGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
F +M S+PDI++ATPGRFLH+ +EM L L ++ + FDE
Sbjct: 216 FKMMM-SNPDIIIATPGRFLHLKVEMELSLASVEYICFDE 254
>UniRef50_Q09719 Cluster: ATP-dependent RNA helicase dbp10; n=2;
Schizosaccharomyces pombe|Rep: ATP-dependent RNA
helicase dbp10 - Schizosaccharomyces pombe (Fission
yeast)
Length = 848
Score = 186 bits (452), Expect = 5e-46
Identities = 94/156 (60%), Positives = 118/156 (75%)
Frame = +3
Query: 192 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 371
FQSMGL+ +L+ I K+G+K PTPIQRKTIP+ L G+DVV MARTGSGKTA FV+P++E
Sbjct: 71 FQSMGLNQTLLRAIFKKGFKAPTPIQRKTIPLLLEGRDVVGMARTGSGKTAAFVIPMIEH 130
Query: 372 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 551
L N RALILSP RELALQT++ V++ K T L S AI+GG S+E+QF+++
Sbjct: 131 L----KSTLANSNTRALILSPNRELALQTVKVVKDFSKGTDLRSVAIVGGVSLEEQFSLL 186
Query: 552 SGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
SG PDIVVATPGRFLH+ +EM L+L +I VVFDE
Sbjct: 187 SG-KPDIVVATPGRFLHLKVEMKLELSSIEYVVFDE 221
>UniRef50_Q5BFU7 Cluster: ATP-dependent RNA helicase dbp10; n=14;
Pezizomycotina|Rep: ATP-dependent RNA helicase dbp10 -
Emericella nidulans (Aspergillus nidulans)
Length = 936
Score = 185 bits (450), Expect = 1e-45
Identities = 92/158 (58%), Positives = 121/158 (76%)
Frame = +3
Query: 186 GAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPIL 365
G FQ+MGL+ +LK I ++G+ PTPIQRKTIP+ + +DVV MARTGSGKTA FV+P++
Sbjct: 91 GGFQAMGLNANLLKAIARKGFSVPTPIQRKTIPVIMEDQDVVGMARTGSGKTAAFVIPMI 150
Query: 366 EKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFN 545
EKL + K R LILSP+RELALQTL+ V+ELGK T L S ++GG+S+E+QF
Sbjct: 151 EKLKSHSTK----FGARGLILSPSRELALQTLKVVKELGKGTDLKSVLLVGGDSLEEQFG 206
Query: 546 VMSGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
+M+G +PDIV+ATPGRFLH+ +EM+L L +I VVFDE
Sbjct: 207 MMAG-NPDIVIATPGRFLHLKVEMNLDLSSIKYVVFDE 243
>UniRef50_Q688Z4 Cluster: Putative uncharacterized protein; n=3;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 871
Score = 184 bits (449), Expect = 1e-45
Identities = 90/159 (56%), Positives = 120/159 (75%)
Frame = +3
Query: 183 SGAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPI 362
+G +Q +GL V K I K+G+ QPTPIQRKTIP + GKDVVAM+RTGSGKTA FV+P+
Sbjct: 23 AGGWQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVAMSRTGSGKTAAFVIPM 82
Query: 363 LEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQF 542
L+KL + T G +RAL++SPTRELALQT + V+ELG+FTGL A ++GG+ IE+QF
Sbjct: 83 LQKL---KRRDTTG--IRALMVSPTRELALQTFKVVKELGRFTGLRCACLVGGDQIEEQF 137
Query: 543 NVMSGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
+ + +PDI++ATPGR LH+ +EM L+L + VVFDE
Sbjct: 138 STIH-ENPDILLATPGRLLHVIVEMDLRLSYVQYVVFDE 175
>UniRef50_Q2H0R2 Cluster: ATP-dependent RNA helicase DBP10; n=1;
Chaetomium globosum|Rep: ATP-dependent RNA helicase
DBP10 - Chaetomium globosum (Soil fungus)
Length = 762
Score = 182 bits (443), Expect = 7e-45
Identities = 87/159 (54%), Positives = 124/159 (77%)
Frame = +3
Query: 183 SGAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPI 362
SG FQ+MGL+ +L+ I+++G+ PTPIQRKTIP+ L +DVV MARTGSGKTA FV+P+
Sbjct: 85 SGGFQAMGLNSNLLRAISRKGFSVPTPIQRKTIPLVLERRDVVGMARTGSGKTAAFVIPM 144
Query: 363 LEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQF 542
+E+L + + RA+I+SP+RELALQTL+ V+ELGK T L + ++GG+S+E+QF
Sbjct: 145 IERLKAHSAR----VGARAIIMSPSRELALQTLKVVKELGKGTDLKTVLLVGGDSLEEQF 200
Query: 543 NVMSGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
+M+ ++PDI++ATPGRFLH+ +EMSL L ++ VVFDE
Sbjct: 201 GLMA-ANPDIIIATPGRFLHLKVEMSLNLSSVRYVVFDE 238
>UniRef50_A4R5B8 Cluster: ATP-dependent RNA helicase DBP10; n=2;
Sordariomycetes|Rep: ATP-dependent RNA helicase DBP10 -
Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 914
Score = 178 bits (433), Expect = 1e-43
Identities = 88/159 (55%), Positives = 121/159 (76%)
Frame = +3
Query: 183 SGAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPI 362
SG FQ+MGL+ +L+ IT++G+ PTPIQRK+IP+ L +DVV MARTGSGKTA FV+P+
Sbjct: 89 SGGFQAMGLNPSLLQAITRKGFAVPTPIQRKSIPLILDRRDVVGMARTGSGKTAAFVIPM 148
Query: 363 LEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQF 542
+E+L + + RALI+SP+RELALQTL+ V+E GK T L + ++GG+S+E QF
Sbjct: 149 IERLRAHSAR----VGARALIMSPSRELALQTLKVVKEFGKGTDLKTVLLVGGDSLEDQF 204
Query: 543 NVMSGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
M+ ++PDI++ATPGRFLH+ +EMSL L +I VVFDE
Sbjct: 205 GFMT-TNPDIIIATPGRFLHLKVEMSLDLSSIKYVVFDE 242
>UniRef50_Q0UMB6 Cluster: ATP-dependent RNA helicase DBP10; n=1;
Phaeosphaeria nodorum|Rep: ATP-dependent RNA helicase
DBP10 - Phaeosphaeria nodorum (Septoria nodorum)
Length = 878
Score = 177 bits (431), Expect = 2e-43
Identities = 84/158 (53%), Positives = 119/158 (75%)
Frame = +3
Query: 186 GAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPIL 365
G FQ+MGL+ +LK I ++G+K PTPIQRK +P+ L G DVV MARTGSGKTA FV+P++
Sbjct: 78 GGFQAMGLNVALLKAIAQKGFKIPTPIQRKAVPLILQGDDVVGMARTGSGKTAAFVIPMI 137
Query: 366 EKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFN 545
E+L + K R +I+SP+RELALQTL+ V+E G+ T L + ++GG+S+E+QFN
Sbjct: 138 ERLKTHSAK----VGARGVIMSPSRELALQTLKVVKEFGRGTDLRTILLVGGDSLEEQFN 193
Query: 546 VMSGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
M+ ++PDI++ATPGRFLH+ +EM L L ++ +VFDE
Sbjct: 194 SMT-TNPDIIIATPGRFLHLKVEMGLDLSSVQYIVFDE 230
>UniRef50_O49289 Cluster: Putative DEAD-box ATP-dependent RNA
helicase 29; n=4; core eudicotyledons|Rep: Putative
DEAD-box ATP-dependent RNA helicase 29 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 845
Score = 171 bits (415), Expect = 2e-41
Identities = 86/160 (53%), Positives = 115/160 (71%), Gaps = 1/160 (0%)
Frame = +3
Query: 183 SGAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPI 362
SG F+S+ L V I K+GYK PTPIQRKT+P+ L+G DVVAMARTGSGKTA F++P+
Sbjct: 27 SGGFESLNLGPNVFNAIKKKGYKVPTPIQRKTMPLILSGVDVVAMARTGSGKTAAFLIPM 86
Query: 363 LEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQF 542
LEKL + P +RALILSPTR+LA QTL+F +ELGKFT L + ++GG+S+E QF
Sbjct: 87 LEKL----KQHVPQGGVRALILSPTRDLAEQTLKFTKELGKFTDLRVSLLVGGDSMEDQF 142
Query: 543 NVMSGSSPDIVVATPGRFLHICIEM-SLKLDNIXIVVFDE 659
++ PD+++ATPGR +H+ E+ + L + VVFDE
Sbjct: 143 EELT-KGPDVIIATPGRLMHLLSEVDDMTLRTVEYVVFDE 181
>UniRef50_Q12389 Cluster: ATP-dependent RNA helicase DBP10; n=10;
Saccharomycetales|Rep: ATP-dependent RNA helicase DBP10
- Saccharomyces cerevisiae (Baker's yeast)
Length = 995
Score = 169 bits (412), Expect = 4e-41
Identities = 84/159 (52%), Positives = 116/159 (72%), Gaps = 1/159 (0%)
Frame = +3
Query: 186 GAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPIL 365
G+F S GLS VL I ++G++QPTPIQRKTIP+ L +D+V MARTGSGKTA F+LP++
Sbjct: 137 GSFPSFGLSKIVLNNIKRKGFRQPTPIQRKTIPLILQSRDIVGMARTGSGKTAAFILPMV 196
Query: 366 EKLLVPNNKPTPGK-NLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQF 542
EKL K GK RA+ILSP+RELA+QT ++ + T L S + GG+S+E+QF
Sbjct: 197 EKL-----KSHSGKIGARAVILSPSRELAMQTFNVFKDFARGTELRSVLLTGGDSLEEQF 251
Query: 543 NVMSGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
+M ++PD+++ATPGRFLH+ +EM+L L ++ VVFDE
Sbjct: 252 GMMM-TNPDVIIATPGRFLHLKVEMNLDLKSVEYVVFDE 289
>UniRef50_A3BT52 Cluster: DEAD-box ATP-dependent RNA helicase 29;
n=3; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 29 - Oryza sativa subsp. japonica (Rice)
Length = 851
Score = 167 bits (405), Expect = 3e-40
Identities = 82/160 (51%), Positives = 114/160 (71%), Gaps = 1/160 (0%)
Frame = +3
Query: 183 SGAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPI 362
SG F+SMGL V +G+ +GY+ PTPIQRK +P+ L G D+ AMARTGSGKTA F++P+
Sbjct: 48 SGGFESMGLCEEVYRGVRHKGYRVPTPIQRKAMPLILAGHDIAAMARTGSGKTAAFLVPM 107
Query: 363 LEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQF 542
+++L + G +RALILSPTR+LA QTL+F ++LGKFT L + I+GG+S+E QF
Sbjct: 108 IQRL----RRHDAGAGIRALILSPTRDLATQTLKFAQQLGKFTDLKISLIVGGDSMESQF 163
Query: 543 NVMSGSSPDIVVATPGRFLHICIEM-SLKLDNIXIVVFDE 659
++ +PDI++ATPGR +H E+ L L + VVFDE
Sbjct: 164 EELA-ENPDIIIATPGRLVHHLAEVEDLNLRTVEYVVFDE 202
>UniRef50_UPI0000499A01 Cluster: DEAD/DEAH box helicase; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 684
Score = 161 bits (392), Expect = 1e-38
Identities = 82/160 (51%), Positives = 110/160 (68%)
Frame = +3
Query: 180 SSGAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLP 359
SSG FQSMGL+ L G+ K+GY+ PTPIQRK IP L G D++AMARTGSGKTA +++P
Sbjct: 11 SSGGFQSMGLNKQTLLGVLKKGYRVPTPIQRKAIPAILRGNDIIAMARTGSGKTAAYLVP 70
Query: 360 ILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQ 539
I+ +L T G +R+LI+ PTRELALQT++ ELGK T L ++ I+GG + Q
Sbjct: 71 IINRL---ETHSTEG--VRSLIICPTRELALQTIKVFNELGKLTNLKASLIIGGSKLSDQ 125
Query: 540 FNVMSGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
F+ +S S PDI+VATPGR I ++ L+ + +V FDE
Sbjct: 126 FDNLS-SGPDIIVATPGRLTFILEGANISLNRVEMVCFDE 164
>UniRef50_Q54CD8 Cluster: Putative RNA helicase; n=2; Dictyostelium
discoideum|Rep: Putative RNA helicase - Dictyostelium
discoideum AX4
Length = 1091
Score = 158 bits (383), Expect = 1e-37
Identities = 78/159 (49%), Positives = 113/159 (71%)
Frame = +3
Query: 183 SGAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPI 362
+G FQSM L+ +LK I K+G+ PTPIQRK+IP+ L G D+V MARTGSGKT FV+P+
Sbjct: 229 TGGFQSMDLTKNLLKAILKKGFNVPTPIQRKSIPMILDGHDIVGMARTGSGKTGAFVIPM 288
Query: 363 LEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQF 542
++KL ++ T G +RA+ILSPTRELA+QT + V++ + T L + I+GG+S+E QF
Sbjct: 289 IQKL--GDHSTTVG--VRAVILSPTRELAIQTFKVVKDFSQGTQLRTILIVGGDSMEDQF 344
Query: 543 NVMSGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
++ +PDI++ATPGR +H +E + L + +VFDE
Sbjct: 345 TDLA-RNPDIIIATPGRLMHHLLETGMSLSKVQYIVFDE 382
>UniRef50_Q5CHB7 Cluster: Putative uncharacterized protein; n=2;
Cryptosporidium|Rep: Putative uncharacterized protein -
Cryptosporidium hominis
Length = 868
Score = 157 bits (380), Expect = 3e-37
Identities = 84/160 (52%), Positives = 107/160 (66%)
Frame = +3
Query: 180 SSGAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLP 359
+ G FQS G S +L+ I GY PTPIQRK P L G+DVVAMARTGSGKTA FVLP
Sbjct: 2 AKGTFQSFGFSPKLLESIKIIGYSLPTPIQRKCFPSILAGRDVVAMARTGSGKTAGFVLP 61
Query: 360 ILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQ 539
++E+L +++ +R ++LSPTRELALQT R VR+L T L A+ GG S+++Q
Sbjct: 62 MIERLGCSHSQIV---GIRGVVLSPTRELALQTYRVVRKLACKTNLVVCALTGGSSLDRQ 118
Query: 540 FNVMSGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
F +SG +PDIVVATPGR H IE L L + I++ DE
Sbjct: 119 FESLSG-NPDIVVATPGRLFHHIIEAGLSLIAVKIIILDE 157
>UniRef50_Q4Q2Z6 Cluster: ATP-dependent RNA helicase, putative; n=7;
Trypanosomatidae|Rep: ATP-dependent RNA helicase,
putative - Leishmania major
Length = 803
Score = 156 bits (379), Expect = 4e-37
Identities = 85/158 (53%), Positives = 108/158 (68%)
Frame = +3
Query: 186 GAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPIL 365
G FQS L P+L I K+G+ PTPIQRK IP L G DVVAMARTGSGKTA F++P+L
Sbjct: 22 GGFQSFNLEKPLLDAILKQGFSVPTPIQRKAIPPMLQGNDVVAMARTGSGKTAAFLIPML 81
Query: 366 EKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFN 545
L + G +R L+LSPTREL+LQ LR L KF L AA++GG+S++QQF
Sbjct: 82 NTLKA--HAKIVG--IRGLVLSPTRELSLQILRNGFALNKFLDLRFAALVGGDSMDQQFE 137
Query: 546 VMSGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
+++ S+PD+VVATPGR LHI E SL L ++ +V DE
Sbjct: 138 LLA-SNPDVVVATPGRLLHIMEEASLHLTSVRCLVLDE 174
>UniRef50_Q238V7 Cluster: Type III restriction enzyme, res subunit
family protein; n=1; Tetrahymena thermophila SB210|Rep:
Type III restriction enzyme, res subunit family protein
- Tetrahymena thermophila SB210
Length = 1130
Score = 152 bits (369), Expect = 6e-36
Identities = 78/158 (49%), Positives = 104/158 (65%)
Frame = +3
Query: 186 GAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPIL 365
G F+SM L +PV K I RG+ PTPIQRK IP+ L G+DVVA +RTGSGKTA F++P++
Sbjct: 299 GGFESMNLVYPVYKAIKTRGFNMPTPIQRKAIPLILEGRDVVACSRTGSGKTAAFIIPLI 358
Query: 366 EKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFN 545
KL N+ G RALI+ PTRELALQ ++ KFT LT I+GG +E QF
Sbjct: 359 NKL--QNHSRIVG--ARALIVVPTRELALQIASVLKTFIKFTDLTYTLIVGGHGLEGQFE 414
Query: 546 VMSGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
++ S+PDI++ATPGR + E L L+ + ++FDE
Sbjct: 415 SLA-SNPDIIIATPGRLSQLIDETDLSLNKVEFLIFDE 451
>UniRef50_A6QYH1 Cluster: 2-isopropylmalate synthase; n=4;
Ascomycota|Rep: 2-isopropylmalate synthase - Ajellomyces
capsulatus NAm1
Length = 1466
Score = 149 bits (361), Expect = 6e-35
Identities = 78/162 (48%), Positives = 106/162 (65%), Gaps = 2/162 (1%)
Frame = +3
Query: 180 SSGAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLP 359
S+ +FQ+ LS P+L+G+T G+ PTPIQRKTIP+AL GKDVV A TGSGKT F++P
Sbjct: 303 SAKSFQAFSLSRPILRGLTSVGFTTPTPIQRKTIPVALLGKDVVGGAVTGSGKTGAFIIP 362
Query: 360 ILEKLLV-PNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQ 536
ILE+LL P PT R IL PTRELA+Q +L FT +T ++GG S+ +
Sbjct: 363 ILERLLYRPRKVPTS----RVAILMPTRELAVQCYNVATKLATFTDITFCQLVGGFSLRE 418
Query: 537 QFNVMSGSSPDIVVATPGRFL-HICIEMSLKLDNIXIVVFDE 659
Q N++ PD+++ATPGRF+ H+ S +D + I+V DE
Sbjct: 419 QENILK-KRPDVIIATPGRFIDHMRNSASFTVDTLEILVLDE 459
>UniRef50_P32892 Cluster: ATP-dependent RNA helicase DRS1; n=13;
Saccharomycetales|Rep: ATP-dependent RNA helicase DRS1 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 752
Score = 145 bits (352), Expect = 7e-34
Identities = 86/206 (41%), Positives = 123/206 (59%), Gaps = 2/206 (0%)
Frame = +3
Query: 48 KQHGEIKLIKMLKPKELDDHLPGFDAPKADXXXXXXXXXXXXXXSSGAFQSMGLSFPVLK 227
++ E+ L K K E+D+ +A KAD F S+ LS PVLK
Sbjct: 186 EEQEEMTLEKGGKDDEIDEEDDSEEA-KADFYAPETEGDEAKKQMYENFNSLSLSRPVLK 244
Query: 228 GITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEKLLVPNNKPTPGK 407
G+ GY +P+PIQ TIPIAL GKD++A A TGSGKTA F++PI+E+LL KP
Sbjct: 245 GLASLGYVKPSPIQSATIPIALLGKDIIAGAVTGSGKTAAFMIPIIERLLY---KPAKIA 301
Query: 408 NLRALILSPTRELALQTLRFVRELGKF-TGLTSAAILGGESIEQQFNVMSGSSPDIVVAT 584
+ R ++L PTRELA+Q +++ +F +G+T +GG ++ QQ ++ S PDIV+AT
Sbjct: 302 STRVIVLLPTRELAIQVADVGKQIARFVSGITFGLAVGGLNLRQQEQMLK-SRPDIVIAT 360
Query: 585 PGRFL-HICIEMSLKLDNIXIVVFDE 659
PGRF+ HI S +D++ I+V DE
Sbjct: 361 PGRFIDHIRNSASFNVDSVEILVMDE 386
>UniRef50_Q54TJ4 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 783
Score = 143 bits (346), Expect = 4e-33
Identities = 75/157 (47%), Positives = 105/157 (66%), Gaps = 1/157 (0%)
Frame = +3
Query: 192 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 371
F+ + LS P+LK + K G+ QPTPIQ K IP+AL GKD++A A TGSGKTA F+LP+LE+
Sbjct: 192 FEELHLSRPLLKAVQKLGFSQPTPIQAKAIPLALNGKDILASASTGSGKTAAFLLPVLER 251
Query: 372 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 551
LL + + + +R LIL PTRELALQ + L +F+ +TS I+GG S + Q V
Sbjct: 252 LLF---RDSEYRAIRVLILLPTRELALQCQSVMENLAQFSNITSCLIVGGLSNKAQ-EVE 307
Query: 552 SGSSPDIVVATPGRFL-HICIEMSLKLDNIXIVVFDE 659
SPD+V+ATPGR + H+ + LD++ I++ DE
Sbjct: 308 LRKSPDVVIATPGRLIDHLLNAHGIGLDDLEILILDE 344
>UniRef50_Q5BF42 Cluster: Putative uncharacterized protein; n=1;
Emericella nidulans|Rep: Putative uncharacterized protein
- Emericella nidulans (Aspergillus nidulans)
Length = 1676
Score = 142 bits (345), Expect = 5e-33
Identities = 75/159 (47%), Positives = 102/159 (64%), Gaps = 2/159 (1%)
Frame = +3
Query: 189 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILE 368
+FQ LS P+L+G+ + PTPIQ+KTIP+AL GKD+V A TGSGKTA FV+PILE
Sbjct: 791 SFQEFNLSRPILRGLAAVNFTNPTPIQQKTIPVALLGKDIVGSAVTGSGKTAAFVVPILE 850
Query: 369 KLLV-PNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFN 545
+LL P PT R IL PTRELA+Q +L +T +T ++GG S+ +Q N
Sbjct: 851 RLLFRPRKVPTS----RVAILMPTRELAVQCYNVATKLATYTDITFCQLVGGFSLREQEN 906
Query: 546 VMSGSSPDIVVATPGRFL-HICIEMSLKLDNIXIVVFDE 659
V+ PD+++ATPGRF+ H+ S +D + I+V DE
Sbjct: 907 VLK-KRPDVIIATPGRFIDHMRNSASFTVDTLEILVLDE 944
>UniRef50_Q0LVA0 Cluster: Helicase-like:DEAD/DEAH box helicase-like;
n=7; Alphaproteobacteria|Rep: Helicase-like:DEAD/DEAH
box helicase-like - Caulobacter sp. K31
Length = 542
Score = 141 bits (342), Expect = 1e-32
Identities = 71/156 (45%), Positives = 98/156 (62%)
Frame = +3
Query: 192 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 371
F +GL+ P+LK +T +GY PTPIQ + IP+ ++G+D++ +A+TG+GKTA F LPIL +
Sbjct: 67 FTDLGLAKPLLKALTDKGYTVPTPIQAQAIPLVMSGRDLLGIAQTGTGKTAAFALPILHR 126
Query: 372 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 551
L + KP P + R L+LSPTRELA Q R+ GK GLT A I GG Q +
Sbjct: 127 -LAEDKKPAPRRGFRCLVLSPTRELATQIAESFRDYGKHMGLTVATIFGGVKYGPQMKAL 185
Query: 552 SGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
+ + D+VVATPGR + E S L+ + I V DE
Sbjct: 186 A-AGVDVVVATPGRLMDHLGEKSAHLNGVEIFVLDE 220
>UniRef50_Q0HYG8 Cluster: DEAD/DEAH box helicase domain protein;
n=62; Proteobacteria|Rep: DEAD/DEAH box helicase domain
protein - Shewanella sp. (strain MR-7)
Length = 549
Score = 140 bits (339), Expect = 3e-32
Identities = 74/157 (47%), Positives = 101/157 (64%)
Frame = +3
Query: 189 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILE 368
+F S+GLS P+ K +T++GY P+PIQ + IP LTGKDV+A A+TG+GKTA F LP+LE
Sbjct: 2 SFSSLGLSLPIQKAVTEQGYDTPSPIQAQAIPAVLTGKDVMAAAQTGTGKTAGFTLPLLE 61
Query: 369 KLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNV 548
LL NK G+ +RAL+L+PTRELA Q V GK+ L SA + GG I Q
Sbjct: 62 -LLSKGNKAKAGQ-IRALVLTPTRELAAQVSESVETYGKYLPLRSAVVFGGVPINPQIQK 119
Query: 549 MSGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
+ D++VATPGR L + + +K + + I+V DE
Sbjct: 120 LR-HGVDVLVATPGRLLDLVQQNVVKFNQLEILVLDE 155
>UniRef50_A0KTC9 Cluster: DEAD/DEAH box helicase domain protein;
n=132; Bacteria|Rep: DEAD/DEAH box helicase domain
protein - Shewanella sp. (strain ANA-3)
Length = 578
Score = 139 bits (337), Expect = 5e-32
Identities = 73/157 (46%), Positives = 102/157 (64%)
Frame = +3
Query: 189 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILE 368
+F S+GLS P+ K +T++GY P+PIQ + IP LTGKDV+A A+TG+GKTA F LP+LE
Sbjct: 2 SFSSLGLSAPIQKAVTEQGYDTPSPIQAQAIPAVLTGKDVMAAAQTGTGKTAGFTLPLLE 61
Query: 369 KLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNV 548
LL NK G+ +RAL+L+PTRELA Q V GK+ L SA + GG I Q
Sbjct: 62 -LLSKGNKAKAGQ-IRALVLTPTRELAAQVSESVETYGKYLPLRSAVVFGGVPINPQIQK 119
Query: 549 MSGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
+ D++VATPGR L + + ++K + + ++V DE
Sbjct: 120 LR-HGVDVLVATPGRLLDLEQQKAVKFNQLEVLVLDE 155
>UniRef50_Q09903 Cluster: ATP-dependent RNA helicase drs1; n=1;
Schizosaccharomyces pombe|Rep: ATP-dependent RNA
helicase drs1 - Schizosaccharomyces pombe (Fission
yeast)
Length = 754
Score = 139 bits (337), Expect = 5e-32
Identities = 77/159 (48%), Positives = 102/159 (64%), Gaps = 2/159 (1%)
Frame = +3
Query: 189 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILE 368
+FQSM LS P+LKG++ G++ PT IQ KTIP+AL GKD+V A TGSGKTA F++PILE
Sbjct: 260 SFQSMNLSRPILKGLSNLGFEVPTQIQDKTIPLALLGKDIVGAAVTGSGKTAAFIVPILE 319
Query: 369 KLLV-PNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFN 545
+LL P PT R LIL PTRELA+Q ++ FT + +GG S++ Q
Sbjct: 320 RLLYRPKKVPT----TRVLILCPTRELAMQCHSVATKIASFTDIMVCLCIGGLSLKLQEQ 375
Query: 546 VMSGSSPDIVVATPGRFL-HICIEMSLKLDNIXIVVFDE 659
+ PDIV+ATPGRF+ H+ ++NI I+V DE
Sbjct: 376 ELR-KRPDIVIATPGRFIDHMRNSQGFTVENIEIMVMDE 413
>UniRef50_Q4P3W3 Cluster: ATP-dependent RNA helicase DBP10; n=1;
Ustilago maydis|Rep: ATP-dependent RNA helicase DBP10 -
Ustilago maydis (Smut fungus)
Length = 1154
Score = 139 bits (337), Expect = 5e-32
Identities = 75/173 (43%), Positives = 115/173 (66%), Gaps = 15/173 (8%)
Frame = +3
Query: 186 GAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTG--KDVVAMARTGSGKTACFVLP 359
G+FQSMGL +L+ + RG+ PTPIQR+ IP ++ +DVV MARTGSGKT +++P
Sbjct: 144 GSFQSMGLHPSLLRSLLIRGFTTPTPIQRQAIPAIMSQPPRDVVGMARTGSGKTLAYLIP 203
Query: 360 ILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKF-------------TGLT 500
++ +L N + +P +++LIL P+RELA+Q LR +E+ + +
Sbjct: 204 LINRL---NGRHSPTFGIKSLILCPSRELAVQILRVGKEIARGWKADAGEGQDSRGEAIR 260
Query: 501 SAAILGGESIEQQFNVMSGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
A I+GGES+++QF +MS ++PD+V+ATPGR LH+ +EM+L L ++ VVFDE
Sbjct: 261 WAIIVGGESLDEQFGIMS-NNPDVVIATPGRMLHLTVEMNLDLKSVEYVVFDE 312
>UniRef50_A0EIJ0 Cluster: Chromosome undetermined scaffold_99, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_99,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 706
Score = 139 bits (336), Expect = 6e-32
Identities = 72/159 (45%), Positives = 104/159 (65%)
Frame = +3
Query: 183 SGAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPI 362
SG F+SMGL + + I +G+ PTPIQRK IP L G+D+VA ++TGSGKTA F++P+
Sbjct: 9 SGGFESMGLIPELYRAIKSQGFNVPTPIQRKAIPQILAGRDIVACSKTGSGKTAAFLIPL 68
Query: 363 LEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQF 542
+ KL N+ G +R LIL PTRELALQ ++ L KF+ + + ++GG E QF
Sbjct: 69 INKL--QNHSTVVG--IRGLILLPTRELALQIASVLKALLKFSDIQYSIMVGGHGFEGQF 124
Query: 543 NVMSGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
++ S+PDI++ TPGR L +E LKL + +V++DE
Sbjct: 125 ESLA-SNPDILICTPGRVLQHLLEDRLKLSRVQMVIYDE 162
>UniRef50_Q9ZRZ8 Cluster: DEAD-box ATP-dependent RNA helicase 28;
n=5; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 28 - Arabidopsis thaliana (Mouse-ear cress)
Length = 789
Score = 138 bits (335), Expect = 8e-32
Identities = 75/157 (47%), Positives = 102/157 (64%), Gaps = 1/157 (0%)
Frame = +3
Query: 192 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 371
F + LS P+L+ GYK+PTPIQ IP+ALTG+D+ A A TGSGKTA F LP LE+
Sbjct: 169 FMELNLSRPLLRACETLGYKKPTPIQAACIPLALTGRDLCASAITGSGKTAAFALPTLER 228
Query: 372 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 551
LL +P R LIL+PTRELA+Q ++ L +FT + I+GG S+ +Q V+
Sbjct: 229 LLF---RPKRVFATRVLILTPTRELAVQIHSMIQNLAQFTDIKCGLIVGGLSVREQ-EVV 284
Query: 552 SGSSPDIVVATPGRFL-HICIEMSLKLDNIXIVVFDE 659
S PDIVVATPGR + H+ MS+ LD++ +++ DE
Sbjct: 285 LRSMPDIVVATPGRMIDHLRNSMSVDLDDLAVLILDE 321
>UniRef50_P25888 Cluster: Putative ATP-dependent RNA helicase rhlE;
n=122; cellular organisms|Rep: Putative ATP-dependent
RNA helicase rhlE - Escherichia coli (strain K12)
Length = 454
Score = 137 bits (331), Expect = 3e-31
Identities = 68/157 (43%), Positives = 103/157 (65%)
Frame = +3
Query: 189 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILE 368
+F S+GLS +L+ + ++GY++PTPIQ++ IP L G+D++A A+TG+GKTA F LP+L+
Sbjct: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61
Query: 369 KLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNV 548
L+ + +RALIL+PTRELA Q VR+ K+ + S + GG SI Q
Sbjct: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMK 121
Query: 549 MSGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
+ G D++VATPGR L + + ++KLD + I+V DE
Sbjct: 122 LRG-GVDVLVATPGRLLDLEHQNAVKLDQVEILVLDE 157
>UniRef50_P0C2N7 Cluster: ATP-dependent RNA helicase DRS1; n=2;
Chaetomium globosum|Rep: ATP-dependent RNA helicase DRS1
- Chaetomium globosum (Soil fungus)
Length = 795
Score = 136 bits (330), Expect = 3e-31
Identities = 76/159 (47%), Positives = 102/159 (64%), Gaps = 2/159 (1%)
Frame = +3
Query: 189 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILE 368
+FQ M LS P+L+G+T G+ +PTPIQ KTIPIAL GKDVV A TGSGKTA FV+PILE
Sbjct: 277 SFQGMSLSRPILRGLTSVGFTKPTPIQAKTIPIALMGKDVVGGAVTGSGKTAAFVVPILE 336
Query: 369 KLLV-PNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFN 545
+LL P PT R ++L+PTRELA+Q +L T + +GG S++ Q
Sbjct: 337 RLLYRPKKVPT----TRVVVLTPTRELAIQCHSVATKLASHTDIKFCLAVGGLSLKVQEG 392
Query: 546 VMSGSSPDIVVATPGRFL-HICIEMSLKLDNIXIVVFDE 659
+ PD+V+ATPGRF+ H+ S ++ + I+V DE
Sbjct: 393 ELR-LRPDVVIATPGRFIDHMRNSASFAVETVEILVLDE 430
>UniRef50_Q96GQ7 Cluster: Probable ATP-dependent RNA helicase DDX27;
n=34; Bilateria|Rep: Probable ATP-dependent RNA helicase
DDX27 - Homo sapiens (Human)
Length = 796
Score = 136 bits (330), Expect = 3e-31
Identities = 70/158 (44%), Positives = 100/158 (63%), Gaps = 1/158 (0%)
Frame = +3
Query: 189 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILE 368
+FQ M LS P+LK IT G+KQPTPIQ+ IP+ L GKD+ A A TG+GKTA F LP+LE
Sbjct: 219 SFQDMNLSRPLLKAITAMGFKQPTPIQKACIPVGLLGKDICACAATGTGKTAAFALPVLE 278
Query: 369 KLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNV 548
+L+ KP R L+L PTREL +Q R+L +F +T+ +GG ++ Q
Sbjct: 279 RLIY---KPRQAPVTRVLVLVPTRELGIQVHSVTRQLAQFCNITTCLAVGGLDVKSQEAA 335
Query: 549 MSGSSPDIVVATPGRFL-HICIEMSLKLDNIXIVVFDE 659
+ ++PDI++ATPGR + H+ S L +I +++ DE
Sbjct: 336 LR-AAPDILIATPGRLIDHLHNCPSFHLSSIEVLILDE 372
>UniRef50_P0C2N8 Cluster: ATP-dependent RNA helicase drs-1; n=16;
Fungi/Metazoa group|Rep: ATP-dependent RNA helicase
drs-1 - Neurospora crassa
Length = 829
Score = 136 bits (329), Expect = 4e-31
Identities = 78/159 (49%), Positives = 101/159 (63%), Gaps = 2/159 (1%)
Frame = +3
Query: 189 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILE 368
+FQ M LS P+L+G+T G+ +PTPIQ KTIPI+L GKDVV A TGSGKTA FV+PILE
Sbjct: 294 SFQEMSLSRPILRGLTSVGFTKPTPIQAKTIPISLMGKDVVGGAVTGSGKTAAFVVPILE 353
Query: 369 KLLV-PNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFN 545
+LL P PT R +IL+PTRELA+Q +L T + +GG S++ Q
Sbjct: 354 RLLYRPKKVPT----TRVVILTPTRELAIQCHAVAVKLASHTDIKFCLAVGGLSLKVQ-E 408
Query: 546 VMSGSSPDIVVATPGRFL-HICIEMSLKLDNIXIVVFDE 659
PD+V+ATPGRF+ H+ S +D I I+V DE
Sbjct: 409 AELRLRPDVVIATPGRFIDHMRNSASFAVDTIEILVLDE 447
>UniRef50_A5G1U8 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Acidiphilium cryptum JF-5|Rep: DEAD/DEAH box
helicase domain protein - Acidiphilium cryptum (strain
JF-5)
Length = 525
Score = 132 bits (318), Expect = 9e-30
Identities = 69/156 (44%), Positives = 99/156 (63%)
Frame = +3
Query: 192 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 371
F ++GL+ P+L+ I+++ Y+ PTPIQ ++IP+ L G D+V +A+TG+GKTA FVLPIL +
Sbjct: 59 FTTLGLAEPLLRAISEQSYETPTPIQARSIPVMLEGHDLVGIAQTGTGKTAAFVLPILHR 118
Query: 372 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 551
+ +P P + RAL+L+PTRELA Q R GKFT + A ++GG Q M
Sbjct: 119 IAANRARPAP-RACRALVLAPTRELATQIADAARTYGKFTRPSVAVVIGGAKPGPQARRM 177
Query: 552 SGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
S D++VATPGR L ++LD + VV DE
Sbjct: 178 E-SGVDLLVATPGRLLDHVAAGVIRLDAVETVVLDE 212
>UniRef50_Q89UH0 Cluster: Dead-box ATP-dependent RNA helicase; n=23;
Alphaproteobacteria|Rep: Dead-box ATP-dependent RNA
helicase - Bradyrhizobium japonicum
Length = 530
Score = 131 bits (317), Expect = 1e-29
Identities = 71/158 (44%), Positives = 100/158 (63%), Gaps = 1/158 (0%)
Frame = +3
Query: 189 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILE 368
+FQ GL+ P+ + +++ Y PTPIQ +TIP ALTG+DVV +A+TG+GKTA F LPIL
Sbjct: 17 SFQDFGLAEPIARALSEENYVTPTPIQAQTIPTALTGRDVVGIAQTGTGKTASFALPILH 76
Query: 369 KLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQF-N 545
+LL KP P K R L+LSPTREL+ Q L G+ L+S +GG + +Q +
Sbjct: 77 RLLEHRIKPQP-KTTRVLVLSPTRELSGQILDSFNAYGRHIRLSSTLAIGGVPMGRQVRS 135
Query: 546 VMSGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
+M G +++VATPGR L + LKL ++ +V DE
Sbjct: 136 LMQG--VEVLVATPGRLLDLVQSNGLKLGSVEFLVLDE 171
>UniRef50_UPI00015B6038 Cluster: PREDICTED: similar to DEAD box
ATP-dependent RNA helicase; n=1; Nasonia
vitripennis|Rep: PREDICTED: similar to DEAD box
ATP-dependent RNA helicase - Nasonia vitripennis
Length = 836
Score = 131 bits (316), Expect = 2e-29
Identities = 66/157 (42%), Positives = 98/157 (62%), Gaps = 1/157 (0%)
Frame = +3
Query: 192 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 371
F +M LS P+LK +T + PTPIQ TIP+AL G+D+ A TG+GKTA ++LP LE+
Sbjct: 156 FYNMNLSRPLLKAVTSMNFVNPTPIQAATIPVALMGRDICGCAATGTGKTAAYMLPTLER 215
Query: 372 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 551
LL +P G R L+L PTREL +Q + ++L +FT + +GG ++ Q +V+
Sbjct: 216 LLY---RPLDGAVTRVLVLVPTRELGVQVYQVTKQLSQFTSVEVGLSVGGLDVKVQESVL 272
Query: 552 SGSSPDIVVATPGRFL-HICIEMSLKLDNIXIVVFDE 659
+PDIV+ATPGR + H+ + LD I +++ DE
Sbjct: 273 R-KNPDIVIATPGRLIDHLANTPTFSLDTIEVLILDE 308
>UniRef50_Q4V836 Cluster: MGC114699 protein; n=9; Deuterostomia|Rep:
MGC114699 protein - Xenopus laevis (African clawed frog)
Length = 758
Score = 130 bits (315), Expect = 2e-29
Identities = 68/157 (43%), Positives = 98/157 (62%), Gaps = 1/157 (0%)
Frame = +3
Query: 192 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 371
FQ M LS P+LK I+ + QPTPIQ+ IP+ L GKD+ A A TG+GKTA F+LP+LE+
Sbjct: 183 FQDMNLSRPLLKAISAMSFTQPTPIQKACIPVGLLGKDICACAATGTGKTAAFMLPVLER 242
Query: 372 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 551
L+ KP R L+L PTREL +Q R+L +FT +T+ +GG ++ Q +
Sbjct: 243 LIY---KPREAPVTRVLVLVPTRELGIQVHAVTRQLAQFTEVTTCLAVGGLDVKTQEAAL 299
Query: 552 SGSSPDIVVATPGRFL-HICIEMSLKLDNIXIVVFDE 659
S PD+++ATPGR + H+ S L+ I +++ DE
Sbjct: 300 R-SGPDVLIATPGRLIDHLHNCPSFSLNCIEVLILDE 335
>UniRef50_Q016I5 Cluster: Predicted ATP-dependent RNA helicase FAL1,
involved in rRNA maturation, DEAD-box superfamily; n=2;
Ostreococcus|Rep: Predicted ATP-dependent RNA helicase
FAL1, involved in rRNA maturation, DEAD-box superfamily
- Ostreococcus tauri
Length = 1222
Score = 129 bits (312), Expect = 5e-29
Identities = 76/161 (47%), Positives = 102/161 (63%), Gaps = 1/161 (0%)
Frame = +3
Query: 180 SSGAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLP 359
SSG F+SM + V + + ++GY+ PTPIQRK IP AL G+DVVAMARTGSGKTA F++P
Sbjct: 464 SSGGFESMEILPEVFRAVKRKGYRVPTPIQRKAIPPALEGRDVVAMARTGSGKTAAFLIP 523
Query: 360 ILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQ 539
+L KL + + G +R T F +EL KFT L AA++GG+S+E Q
Sbjct: 524 VLSKLRTHSFE--SGCTVRG------------TFAFAKELSKFTNLRVAALVGGDSMEAQ 569
Query: 540 FNVMSGSSPDIVVATPGRFLHICIEM-SLKLDNIXIVVFDE 659
F +S ++PDI+VATPGR LH E+ + L + VV DE
Sbjct: 570 FADLS-NNPDIIVATPGRLLHHVEEVKAFTLRTVCHVVLDE 609
>UniRef50_A2EAD4 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 703
Score = 129 bits (312), Expect = 5e-29
Identities = 68/151 (45%), Positives = 97/151 (64%)
Frame = +3
Query: 207 LSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEKLLVPN 386
L P LK T Y++PTPIQ++ IP+ L DVVAM++TGSGKTA F+LPI++KL
Sbjct: 8 LEGPALKVATTM-YRKPTPIQKEVIPVVLADHDVVAMSKTGSGKTASFLLPIVQKL---- 62
Query: 387 NKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVMSGSSP 566
N+ + R LI++P+RELALQT + ++ T L A I+GGE++ QF ++ +P
Sbjct: 63 NEHSTITGCRCLIITPSRELALQTGHYFQKYASQTNLKCAQIIGGEALPPQFESLT-KNP 121
Query: 567 DIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
D+++ATPGR L I E L + I+V DE
Sbjct: 122 DVIIATPGRLLQIIAETQYSLSRVQIIVIDE 152
>UniRef50_Q4P9P3 Cluster: ATP-dependent RNA helicase DRS1; n=1;
Ustilago maydis|Rep: ATP-dependent RNA helicase DRS1 -
Ustilago maydis (Smut fungus)
Length = 932
Score = 129 bits (311), Expect = 7e-29
Identities = 70/162 (43%), Positives = 101/162 (62%), Gaps = 2/162 (1%)
Frame = +3
Query: 180 SSGAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLP 359
+ +F + LS PVL+ ++ + +PTPIQ +TIPIAL GKD+VA A TGSGKTA F++P
Sbjct: 331 AESSFGAFDLSRPVLRALSSLSFHKPTPIQSRTIPIALAGKDIVAGAVTGSGKTAAFMIP 390
Query: 360 ILEKLLVPNNKPTPGK-NLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQ 536
+E+L TP + R LIL+PTRELA+Q + + KFT + +GG S++
Sbjct: 391 TIERLTWRAKTRTPHEAKSRVLILAPTRELAIQCYSVGKSIAKFTDIRFCLCVGGLSVKS 450
Query: 537 QFNVMSGSSPDIVVATPGRFL-HICIEMSLKLDNIXIVVFDE 659
Q + P++V+ATPGR + H+ S LD+I I+V DE
Sbjct: 451 QEAELK-LRPEVVIATPGRLIDHVRNSASFTLDDIEILVMDE 491
>UniRef50_UPI00003C8469 Cluster: hypothetical protein Faci_03001730;
n=1; Ferroplasma acidarmanus fer1|Rep: hypothetical
protein Faci_03001730 - Ferroplasma acidarmanus fer1
Length = 430
Score = 128 bits (308), Expect = 2e-28
Identities = 67/153 (43%), Positives = 97/153 (63%)
Frame = +3
Query: 201 MGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEKLLV 380
M +S + K + + +PT IQ K IP+ LTGKDV+ ++TGSGKTA ++LP+L +
Sbjct: 1 MDISENLKKSLGLMKFTEPTEIQEKAIPVVLTGKDVIIRSKTGSGKTAAYLLPVLNSV-- 58
Query: 381 PNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVMSGS 560
+ GK+++A+I+ PTRELALQT R LGK +G+ S + GG SI +Q + GS
Sbjct: 59 ---EKLKGKSVKAIIILPTRELALQTHRVASRLGKISGIKSTIVYGGASIIRQVEELPGS 115
Query: 561 SPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
DIV+ TPGR L + + LKLD++ +V DE
Sbjct: 116 --DIVIGTPGRILDLYNQKYLKLDHVKYLVLDE 146
>UniRef50_Q82T78 Cluster: RhlE; ATP-dependent RNA helicase RhlE;
n=3; Nitrosomonadaceae|Rep: RhlE; ATP-dependent RNA
helicase RhlE - Nitrosomonas europaea
Length = 498
Score = 128 bits (308), Expect = 2e-28
Identities = 68/158 (43%), Positives = 98/158 (62%), Gaps = 2/158 (1%)
Frame = +3
Query: 192 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 371
F +GLS +L + GY PTPIQ + IP L GKDV+A A+TG+GKTA F LP+L +
Sbjct: 7 FAQLGLSSEILHAVNDEGYVNPTPIQAQVIPSILAGKDVMASAQTGTGKTAGFTLPLLYR 66
Query: 372 L-LVPNNKPTPGKN-LRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFN 545
L N +P ++ +RALI++PTRELA+Q VR+ GK+ L +A + GG +IE Q
Sbjct: 67 LQAYANTSVSPARHPVRALIMAPTRELAMQIDESVRKYGKYLALRTAVVFGGINIEPQIA 126
Query: 546 VMSGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
+ + +I+VATPGR L + + ++ I+V DE
Sbjct: 127 ALQ-AGVEILVATPGRLLDLVEQKAVNFSKTEILVLDE 163
>UniRef50_A0KZD5 Cluster: DEAD/DEAH box helicase domain protein;
n=19; Alteromonadales|Rep: DEAD/DEAH box helicase domain
protein - Shewanella sp. (strain ANA-3)
Length = 487
Score = 128 bits (308), Expect = 2e-28
Identities = 68/157 (43%), Positives = 101/157 (64%), Gaps = 1/157 (0%)
Frame = +3
Query: 192 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 371
F ++GLS P+L I + GY Q T +Q++ IP+AL GKD++A A+TG+GKTA F LP+LE+
Sbjct: 24 FDTLGLSSPILNAIAECGYLQLTQVQQQVIPLALEGKDIMACAQTGTGKTASFALPVLEQ 83
Query: 372 L-LVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNV 548
L PN+KP LRAL+++PTRELA+Q +++ +F L + A+ GG ++ Q
Sbjct: 84 LSKQPNDKPL----LRALVMTPTRELAIQVCANIQKYSQFLPLKTLAVYGGANMNPQRKG 139
Query: 549 MSGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
+ DI+VATPGR I + L L ++ +V DE
Sbjct: 140 VE-QGVDILVATPGRLFDIIGQFHLDLSSVTTLVIDE 175
>UniRef50_A2DSJ0 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 515
Score = 128 bits (308), Expect = 2e-28
Identities = 69/158 (43%), Positives = 101/158 (63%), Gaps = 1/158 (0%)
Frame = +3
Query: 189 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILE 368
+F+ +GLS +++ + K ++ PTP+Q KTIPIAL G+DV A A TGSGKTA F++P +E
Sbjct: 17 SFEELGLSHSIIRALHKMNFEIPTPVQNKTIPIALQGRDVCASAVTGSGKTAAFLIPTVE 76
Query: 369 KLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNV 548
+LL +K T + RA+ILSPTRELA QT + ++ +FT LT+ + GG S ++
Sbjct: 77 RLL--RSKSTEAQT-RAVILSPTRELAAQTYSVLSQIIQFTPLTALLLTGGSSNVKEEEE 133
Query: 549 MSGSSPDIVVATPGRFL-HICIEMSLKLDNIXIVVFDE 659
PD +V TPGR + HI L+N+ ++V DE
Sbjct: 134 RLLEYPDFLVCTPGRIIDHIKNCEGFTLENVLVLVLDE 171
>UniRef50_A3WD13 Cluster: DNA and RNA helicase; n=2;
Alphaproteobacteria|Rep: DNA and RNA helicase -
Erythrobacter sp. NAP1
Length = 484
Score = 127 bits (307), Expect = 2e-28
Identities = 62/156 (39%), Positives = 99/156 (63%)
Frame = +3
Query: 192 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 371
F +GLS PVL+ + +GY PTPIQ + IP L G+D++ +A+TG+GKTA F+LP +++
Sbjct: 4 FSDLGLSQPVLQALDLKGYSTPTPIQEQAIPPVLEGRDLLGIAQTGTGKTAAFMLPSIDR 63
Query: 372 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 551
L +N+ P K+ R L+L+PTREL Q ++ G GL +I+GG S+ + N +
Sbjct: 64 LREADNR-IPFKSCRMLVLAPTRELVSQIAASAKDYGALAGLKVQSIVGGTSVNKDRNKL 122
Query: 552 SGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
+ DI++ATPGR L + + + L ++ ++V DE
Sbjct: 123 HRGT-DILIATPGRLLDLIDQKAFNLGSVEVLVLDE 157
>UniRef50_A0KXT6 Cluster: DEAD/DEAH box helicase domain protein;
n=22; Gammaproteobacteria|Rep: DEAD/DEAH box helicase
domain protein - Shewanella sp. (strain ANA-3)
Length = 491
Score = 127 bits (307), Expect = 2e-28
Identities = 67/158 (42%), Positives = 102/158 (64%), Gaps = 2/158 (1%)
Frame = +3
Query: 192 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 371
F +GL ++K +T+ GY PTPIQ K IP L GK+V+A A+TG+GKTA FVLP+L +
Sbjct: 3 FSQLGLHSALVKAVTELGYTTPTPIQTKAIPSILAGKNVLAAAQTGTGKTASFVLPLLHR 62
Query: 372 LL-VPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGG-ESIEQQFN 545
P +P K +RA+IL+PTRELALQ + + K+ LT+ A+ GG ++ Q+
Sbjct: 63 FADAPKIRP---KRVRAIILTPTRELALQVEENINQYAKYLPLTAMAMYGGVDAAPQKKR 119
Query: 546 VMSGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
++ G D++VATPGR L + + +++ D + ++V DE
Sbjct: 120 LIEG--VDLLVATPGRLLDMYTQRAIRFDEVSVLVLDE 155
>UniRef50_Q5FNK0 Cluster: ATP-dependent RNA helicase; n=1;
Gluconobacter oxydans|Rep: ATP-dependent RNA helicase -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 393
Score = 127 bits (306), Expect = 3e-28
Identities = 72/156 (46%), Positives = 98/156 (62%)
Frame = +3
Query: 192 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 371
F+ +GL P+L + + G+K+P+ IQ + IP L GKDV+ ++TGSGKTA FVLP+L+K
Sbjct: 22 FEELGLIAPLLATLAQAGHKRPSLIQTQAIPPLLEGKDVLVGSQTGSGKTAAFVLPMLQK 81
Query: 372 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 551
L P PG RALIL PTRELA QT R+LG+ L + I GG S EQQ +
Sbjct: 82 LTEAG--PAPGP--RALILEPTRELAAQTAAVCRQLGRRLSLKTRVICGGTSREQQVQSV 137
Query: 552 SGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
S DI+VAT GR L + ++ L L+++ +V DE
Sbjct: 138 S-DGVDIIVATHGRLLDLVMQADLVLEHLTYLVLDE 172
>UniRef50_Q95XM9 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 763
Score = 127 bits (306), Expect = 3e-28
Identities = 69/153 (45%), Positives = 92/153 (60%), Gaps = 1/153 (0%)
Frame = +3
Query: 189 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILE 368
+F+ M LS +LK + GY PTPIQ+ IP+ALTGKD+ A A TG+GKTA FVLPILE
Sbjct: 149 SFEQMNLSRQILKACSGAGYSDPTPIQQACIPVALTGKDICACAATGTGKTAAFVLPILE 208
Query: 369 KLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNV 548
+++ +P R L+L PTRELA+Q + R+L F L GG ++ Q
Sbjct: 209 RMIY---RPKGASCTRVLVLVPTRELAIQVFQVFRKLSTFIQLEVCLCAGGLDLKAQEAA 265
Query: 549 MSGSSPDIVVATPGRFL-HICIEMSLKLDNIXI 644
+ S PD+VVATPGR + H+ S L NI +
Sbjct: 266 LR-SGPDVVVATPGRLIDHLHNSPSFNLSNIEV 297
>UniRef50_A6VTY7 Cluster: DEAD/DEAH box helicase domain protein;
n=48; root|Rep: DEAD/DEAH box helicase domain protein -
Marinomonas sp. MWYL1
Length = 463
Score = 126 bits (305), Expect = 4e-28
Identities = 63/160 (39%), Positives = 98/160 (61%)
Frame = +3
Query: 180 SSGAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLP 359
+S +F +GLS P+LK I +GY +P+ IQ + IP L G+DV+A A+TG+GKTA F LP
Sbjct: 3 TSMSFNKLGLSAPILKAIEDQGYTEPSAIQAQAIPAILEGQDVMAAAQTGTGKTAGFTLP 62
Query: 360 ILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQ 539
+LE ++ + +RAL+L+PTRELA Q V+ G+ L S + GG I Q
Sbjct: 63 LLE--ILSKGENAQSNQVRALVLTPTRELAAQVAESVKNYGQHLSLKSTVVFGGVKINPQ 120
Query: 540 FNVMSGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
+ + DI++ATPGR + + + +++ D + ++V DE
Sbjct: 121 MMALRRGA-DILIATPGRMMDLYNQKAVRFDKLEVLVLDE 159
>UniRef50_Q64VR8 Cluster: ATP-dependent RNA helicase DeaD; n=14;
Bacteria|Rep: ATP-dependent RNA helicase DeaD -
Bacteroides fragilis
Length = 427
Score = 126 bits (303), Expect = 6e-28
Identities = 65/156 (41%), Positives = 98/156 (62%)
Frame = +3
Query: 192 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 371
F+++ L P+LK + + GY PTPIQ ++IPI L GKD++ A+TG+GKTA F +PIL+K
Sbjct: 3 FENLNLIEPILKALRQEGYTSPTPIQEQSIPILLQGKDLLGCAQTGTGKTAAFSIPILQK 62
Query: 372 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 551
L +++ K ++AL+L+PTRELA+Q G++TGL A I GG + Q + +
Sbjct: 63 LYKTDHR----KGIKALVLTPTRELAIQIGESFEAYGRYTGLKHAVIFGGVGQKPQTDAL 118
Query: 552 SGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
S I+VATPGR L + + + L ++ V DE
Sbjct: 119 R-SGIQILVATPGRLLDLISQGFISLSSLDFFVLDE 153
>UniRef50_Q08Q14 Cluster: HeliCase, c-terminal:dead/deah box
helicase, n-terminal; n=3; Bacteria|Rep: HeliCase,
c-terminal:dead/deah box helicase, n-terminal -
Stigmatella aurantiaca DW4/3-1
Length = 608
Score = 126 bits (303), Expect = 6e-28
Identities = 64/160 (40%), Positives = 98/160 (61%)
Frame = +3
Query: 180 SSGAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLP 359
+ F+S+GL P+++ ++ GY++PTPIQR +P L GKD++ +A TG+GKTA F LP
Sbjct: 34 ADNTFESLGLLPPLVEALSALGYEEPTPIQRAALPPLLEGKDLLGIAATGTGKTAAFSLP 93
Query: 360 ILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQ 539
+L+++ + P AL+L PTRELA+Q + G+ G++ + GG+ I QQ
Sbjct: 94 LLQRITPGAHAPFTAS---ALVLVPTRELAMQVAEAIHRYGQKLGISVVPLYGGQVISQQ 150
Query: 540 FNVMSGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
V+ D+VVATPGR L +LKL+ + +VV DE
Sbjct: 151 LRVLK-RGVDVVVATPGRALDHLQRKTLKLEQVRVVVLDE 189
>UniRef50_Q62IF8 Cluster: ATP-dependent RNA helicase RhlE; n=59;
Betaproteobacteria|Rep: ATP-dependent RNA helicase RhlE
- Burkholderia mallei (Pseudomonas mallei)
Length = 482
Score = 125 bits (301), Expect = 1e-27
Identities = 68/158 (43%), Positives = 96/158 (60%), Gaps = 2/158 (1%)
Frame = +3
Query: 192 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 371
F GL+ +LK I ++GY PTPIQ K IP+ L+G+DV+ A+TG+GKTA F LPI+++
Sbjct: 13 FDQFGLAAEILKAIAEQGYTTPTPIQAKAIPVVLSGRDVMGAAQTGTGKTASFSLPIIQR 72
Query: 372 LL-VPNNKPTPGKN-LRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFN 545
LL N +P ++ +RALIL+PTRELA Q V K T L SA + GG + Q
Sbjct: 73 LLPQANTSASPARHPVRALILTPTRELADQVAANVHAYAKHTPLRSAVVFGGVDMNPQMA 132
Query: 546 VMSGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
+ +I++ATPGR L + + L + I+V DE
Sbjct: 133 ELR-RGVEILIATPGRLLDHVQQKTANLGQVQILVLDE 169
>UniRef50_Q0BSI7 Cluster: ATP-dependent RNA helicase; n=12;
Alphaproteobacteria|Rep: ATP-dependent RNA helicase -
Granulobacter bethesdensis (strain ATCC BAA-1260 /
CGDNIH1)
Length = 763
Score = 124 bits (300), Expect = 1e-27
Identities = 66/156 (42%), Positives = 98/156 (62%)
Frame = +3
Query: 192 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 371
F +GLS PV + IT+ GY PTPIQ + IP+ L G+DV+ A+TG+GKTA F LP+++
Sbjct: 225 FADLGLSEPVQRAITEMGYLHPTPIQAQAIPVVLMGRDVLGCAQTGTGKTASFTLPMMDI 284
Query: 372 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 551
L +++ + R+LIL PTRELALQ + G++ L A ++GGES+ Q +V+
Sbjct: 285 L---SDRRARARMPRSLILEPTRELALQVAENFVKYGQYLKLNHALLIGGESMNDQRDVL 341
Query: 552 SGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
S D+++ATPGR + + L L + I+V DE
Sbjct: 342 S-KGVDVLIATPGRLIDLFDRGGLLLTDTRILVIDE 376
>UniRef50_Q5FUQ9 Cluster: ATP-dependent RNA helicase; n=11; cellular
organisms|Rep: ATP-dependent RNA helicase -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 793
Score = 124 bits (299), Expect = 2e-27
Identities = 67/156 (42%), Positives = 96/156 (61%)
Frame = +3
Query: 192 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 371
F +GLS P+++ I + GY+ PTPIQ + IP L G DV+ +A+TG+GKTA F LP+L+K
Sbjct: 293 FADLGLSEPIMRAIEELGYEHPTPIQAQAIPEVLKGHDVLGVAQTGTGKTASFTLPMLQK 352
Query: 372 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 551
L + R+LIL PTRELALQ + GK+ LT A ++GGES+ +Q +V+
Sbjct: 353 LA---GSRARARMPRSLILEPTRELALQVAENFKLYGKYLRLTHALLIGGESMAEQRDVL 409
Query: 552 SGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
+ D+++ATPGR L + L L +V DE
Sbjct: 410 N-RGVDVLIATPGRLLDLFGRGGLLLTQTSTLVIDE 444
>UniRef50_Q3AZR1 Cluster: DEAD/DEAH box helicase-like; n=2;
Synechococcus|Rep: DEAD/DEAH box helicase-like -
Synechococcus sp. (strain CC9902)
Length = 458
Score = 124 bits (299), Expect = 2e-27
Identities = 67/156 (42%), Positives = 95/156 (60%)
Frame = +3
Query: 192 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 371
F+ + L ++ I + GY PTPIQ TIP L GKD++A A+TG+GKTA F+LPI+E
Sbjct: 26 FEQLELCAETVRSIKESGYLSPTPIQALTIPEVLQGKDIMASAQTGTGKTAAFILPIIE- 84
Query: 372 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 551
LL +KP + +L+L+PTRELA Q + K+ L S A+ GG SI Q +
Sbjct: 85 LLRAEDKP-KRYQVHSLVLTPTRELAAQVEASAKAYTKYLALRSDAVFGGVSIRPQVKRL 143
Query: 552 SGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
G DI+VATPGR L + + ++ DN+ ++V DE
Sbjct: 144 QG-GVDILVATPGRLLDLINQKMIRFDNLKVLVLDE 178
>UniRef50_Q7JQN4 Cluster: LD15481p; n=7; Endopterygota|Rep: LD15481p
- Drosophila melanogaster (Fruit fly)
Length = 782
Score = 124 bits (299), Expect = 2e-27
Identities = 68/159 (42%), Positives = 98/159 (61%), Gaps = 2/159 (1%)
Frame = +3
Query: 189 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILE 368
+F M LS P+++ I GY PTPIQ TIP+AL G+D+ A TG+GKTA ++LP LE
Sbjct: 158 SFYQMNLSRPLMRAIGVLGYIYPTPIQASTIPVALLGRDICGCAATGTGKTAAYMLPTLE 217
Query: 369 KLLVPNNKPTPGKNL-RALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFN 545
+LL +P K + R L+L PTREL Q + ++L +FT + +GG ++ Q
Sbjct: 218 RLLY---RPLNNKAITRVLVLVPTRELGAQVYQVTKQLCQFTTIDVGLAIGGLDVKAQEA 274
Query: 546 VMSGSSPDIVVATPGRFL-HICIEMSLKLDNIXIVVFDE 659
V+ +PDIV+ATPGR + HI S LD+I +++ DE
Sbjct: 275 VLR-QNPDIVIATPGRLIDHIKNTPSFTLDSIEVLILDE 312
>UniRef50_A4S6M9 Cluster: Predicted protein; n=3; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 755
Score = 123 bits (296), Expect = 4e-27
Identities = 67/158 (42%), Positives = 95/158 (60%), Gaps = 1/158 (0%)
Frame = +3
Query: 189 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILE 368
AF + LS P+ + GYK+PTPIQ IPIA+TG+DV A TGSGKTA F+LP LE
Sbjct: 149 AFDELHLSRPLTRACEALGYKKPTPIQAAVIPIAMTGRDVCGRAVTGSGKTAAFMLPQLE 208
Query: 369 KLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNV 548
++L + P P L+L PTRELA+Q + L +FT + + ++GG S Q
Sbjct: 209 RML--HRGPRPAAATHVLVLVPTRELAVQVHQMTESLAQFTTIRAVLVVGGLSANVQAAA 266
Query: 549 MSGSSPDIVVATPGRFL-HICIEMSLKLDNIXIVVFDE 659
+ + P+IVVATPGR + H+ S L+++ ++ DE
Sbjct: 267 LR-TRPEIVVATPGRVIDHVRNTHSFGLEDLATLILDE 303
>UniRef50_Q5L3G9 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=7; Bacteria|Rep: DEAD-box ATP-dependent RNA helicase
ydbR - Geobacillus kaustophilus
Length = 467
Score = 123 bits (296), Expect = 4e-27
Identities = 63/156 (40%), Positives = 99/156 (63%)
Frame = +3
Query: 192 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 371
FQ +GLS V+K I + G+++ TPIQ KTIP++L KDV+ A+TG+GKTA F +PI+EK
Sbjct: 4 FQELGLSQEVMKAIERMGFEETTPIQAKTIPLSLQNKDVIGQAQTGTGKTAAFGIPIVEK 63
Query: 372 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 551
+ V N+ ++AL+++PTRELA+Q + ++G + I GG+ IE+Q +
Sbjct: 64 VNVKNSA------VQALVVAPTRELAIQVSEELYKIGAVKRVRVLPIYGGQDIERQIRAL 117
Query: 552 SGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
P ++V TPGR + +L+L+++ VV DE
Sbjct: 118 K-KHPHVIVGTPGRIIDHINRGTLRLEHVHTVVLDE 152
>UniRef50_Q9S531 Cluster: DEAD-box protein; n=4;
Cystobacterineae|Rep: DEAD-box protein - Myxococcus
xanthus
Length = 808
Score = 122 bits (294), Expect = 8e-27
Identities = 68/156 (43%), Positives = 92/156 (58%)
Frame = +3
Query: 192 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 371
F M LS P+ + +RGY PTP+Q + A+ GKD++ ++TG+GKTA F LP+LEK
Sbjct: 31 FDDMNLSEPIRLALAERGYTNPTPVQARAFRPAIEGKDLIVRSKTGTGKTAAFGLPLLEK 90
Query: 372 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 551
+ P + +RALIL PTRELALQ ++ L K GL AAI GG S++QQ + +
Sbjct: 91 I------PADERRVRALILCPTRELALQVADELKMLAKHKGLKIAAIYGGASMKQQEDAL 144
Query: 552 SGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
+P I+V TPGR +LKLD V DE
Sbjct: 145 EEGTP-IIVGTPGRVFDHINRGNLKLDACDHAVLDE 179
>UniRef50_Q0FAJ4 Cluster: Dead-box ATP-dependent RNA helicase; n=6;
Alphaproteobacteria|Rep: Dead-box ATP-dependent RNA
helicase - alpha proteobacterium HTCC2255
Length = 531
Score = 122 bits (294), Expect = 8e-27
Identities = 67/159 (42%), Positives = 93/159 (58%)
Frame = +3
Query: 183 SGAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPI 362
+ AF +GL ++K + GY PTPIQ + IP L KD+V +A+TG+GKTA F LP+
Sbjct: 102 ASAFSKLGLDAEIVKALGFLGYTLPTPIQSQAIPAVLNSKDLVGLAQTGTGKTAAFALPL 161
Query: 363 LEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQF 542
+++LL+ N G++ RA+ILSPTRELALQ GK L +GG I +Q
Sbjct: 162 IQQLLM-NPIAIKGRSARAIILSPTRELALQIHEAFVSFGKRLPLNFTHAIGGAPIRKQM 220
Query: 543 NVMSGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
+S DI+VATPGR + + L+LD +V DE
Sbjct: 221 RDLS-KGVDILVATPGRLEDLVDQKGLRLDETKFLVLDE 258
>UniRef50_A6GPV2 Cluster: Helicase; n=1; Limnobacter sp. MED105|Rep:
Helicase - Limnobacter sp. MED105
Length = 539
Score = 122 bits (293), Expect = 1e-26
Identities = 67/158 (42%), Positives = 92/158 (58%), Gaps = 2/158 (1%)
Frame = +3
Query: 192 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 371
F L + K I +GY QPTPIQ K IP+ +TG DV+ A+TG+GKTA F LPIL +
Sbjct: 22 FADFALHPDIQKAIDAQGYTQPTPIQAKAIPVVMTGVDVMGAAQTGTGKTAGFSLPILNR 81
Query: 372 LL-VPNNKPTPGKN-LRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFN 545
L+ + +P ++ +RALIL+PTRELA Q V KFT L S + GG I Q
Sbjct: 82 LMPLATENTSPARHPVRALILTPTRELADQVAANVHTYAKFTPLRSTVVYGGVDINPQIQ 141
Query: 546 VMSGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
+ ++V+ATPGR L + S+ L + ++V DE
Sbjct: 142 TLR-RGVELVIATPGRLLDHVQQKSINLGQVQVLVLDE 178
>UniRef50_P44701 Cluster: ATP-dependent RNA helicase srmB homolog;
n=39; Gammaproteobacteria|Rep: ATP-dependent RNA
helicase srmB homolog - Haemophilus influenzae
Length = 439
Score = 122 bits (293), Expect = 1e-26
Identities = 67/157 (42%), Positives = 95/157 (60%), Gaps = 1/157 (0%)
Frame = +3
Query: 192 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 371
F+ LS +LK + K+GY +PT IQ + IP A+ DV+ A TG+GKTA F+LP L+
Sbjct: 6 FEQFDLSPELLKALEKKGYSRPTAIQMEAIPAAMEESDVLGSAPTGTGKTAAFLLPALQH 65
Query: 372 LL-VPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNV 548
LL P KP P R L+L+PTRELA+Q EL +FT L A I GG + + +V
Sbjct: 66 LLDYPRRKPGPP---RILVLTPTRELAMQVAEQAEELAQFTHLNIATITGGVAYQNHGDV 122
Query: 549 MSGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
+ ++ D+VVATPGR L E + ++ +++FDE
Sbjct: 123 FN-TNQDLVVATPGRLLQYIKEENFDCRSVEMLIFDE 158
>UniRef50_UPI00015BD198 Cluster: UPI00015BD198 related cluster; n=1;
unknown|Rep: UPI00015BD198 UniRef100 entry - unknown
Length = 364
Score = 121 bits (292), Expect = 1e-26
Identities = 61/151 (40%), Positives = 91/151 (60%)
Frame = +3
Query: 207 LSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEKLLVPN 386
LS + K + GYK+PTPIQR IP+AL G D++ A TG+GKT F +PI+EKL
Sbjct: 7 LSLELQKALEDAGYKEPTPIQRDAIPLALEGYDILGQAATGTGKTGAFAIPIVEKL--QK 64
Query: 387 NKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVMSGSSP 566
KP +++AL+L+PTRELA+Q + L K+ L+S GG S++Q +++ +
Sbjct: 65 GKP----DVKALVLTPTRELAIQVKEQIYMLTKYKRLSSYVFYGGTSVKQNLDILQNKNV 120
Query: 567 DIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
DI++ TPGR + +L L + +V DE
Sbjct: 121 DILIGTPGRIKDLIDRKALNLSKVEYLVLDE 151
>UniRef50_UPI0000E87E35 Cluster: putative ATP-dependent RNA helicase
protein; n=1; Methylophilales bacterium HTCC2181|Rep:
putative ATP-dependent RNA helicase protein -
Methylophilales bacterium HTCC2181
Length = 427
Score = 121 bits (292), Expect = 1e-26
Identities = 66/157 (42%), Positives = 93/157 (59%)
Frame = +3
Query: 189 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILE 368
+FQ+ L +LK I + GY QPTPIQ K+IP + K V+A A+TG+GKTA FVLPIL+
Sbjct: 2 SFQTFNLDASILKAIQEAGYDQPTPIQTKSIPEIMLNKHVLASAQTGTGKTAAFVLPILD 61
Query: 369 KLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNV 548
KL + G+ R LI+SPTRELA Q +++ ++ + S I GG S Q N
Sbjct: 62 KL---TKNRSEGRGPRVLIVSPTRELATQITDSIKKYSRYLRINSITITGGISYGLQ-NR 117
Query: 549 MSGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
M DI+VATPGR L + + + + +++ DE
Sbjct: 118 MFSKPIDILVATPGRLLDLYQQKKINFKGLEVMILDE 154
>UniRef50_Q8D6Y8 Cluster: Superfamily II DNA and RNA helicase; n=32;
Gammaproteobacteria|Rep: Superfamily II DNA and RNA
helicase - Vibrio vulnificus
Length = 427
Score = 121 bits (291), Expect = 2e-26
Identities = 66/157 (42%), Positives = 97/157 (61%)
Frame = +3
Query: 189 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILE 368
+F S G + V+K + + GY++ TPIQ+K IP+A G D+ A A+TG+GKTA F LP+++
Sbjct: 2 SFASQGFAPEVVKALEECGYEKLTPIQQKAIPVARRGHDIFATAQTGTGKTAAFSLPLIQ 61
Query: 369 KLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNV 548
+LL + K K RALI +PTRELA Q ++ K+T L+ AAI GG + Q +
Sbjct: 62 QLL-ESGKSASRKTARALIFAPTRELAEQIADNIKAYTKYTNLSVAAIFGGRKMSSQERM 120
Query: 549 MSGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
+ + DI+VATPGR ++ + NI +VFDE
Sbjct: 121 LE-NGVDILVATPGRLEEHIESGNVSVANIEFLVFDE 156
>UniRef50_Q67NW1 Cluster: ATP-dependent RNA helicase; n=5;
Firmicutes|Rep: ATP-dependent RNA helicase -
Symbiobacterium thermophilum
Length = 526
Score = 121 bits (291), Expect = 2e-26
Identities = 64/156 (41%), Positives = 98/156 (62%)
Frame = +3
Query: 192 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 371
F+ + LS VLK + G+++P+PIQ + IP L GKDV+ A+TG+GKTA F +PI+E+
Sbjct: 8 FRDLALSEKVLKALDDMGFEEPSPIQAQAIPALLQGKDVIGQAQTGTGKTAAFGVPIVER 67
Query: 372 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 551
LVP + ++AL+L+PTRELA+Q + ++G+ + + AI GG+SIE+Q +
Sbjct: 68 -LVPGQRA-----VQALVLTPTRELAIQVAEEITKIGRHARVKTIAIYGGQSIERQIRSL 121
Query: 552 SGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
D+V+ TPGR L +L L + +VV DE
Sbjct: 122 R-FGVDVVIGTPGRILDHLGRSTLDLSQVRMVVLDE 156
>UniRef50_Q44NG9 Cluster: Helicase, C-terminal:DEAD/DEAH box
helicase, N-terminal; n=9; Bacteroidetes/Chlorobi
group|Rep: Helicase, C-terminal:DEAD/DEAH box helicase,
N-terminal - Chlorobium limicola DSM 245
Length = 499
Score = 121 bits (291), Expect = 2e-26
Identities = 65/157 (41%), Positives = 96/157 (61%), Gaps = 1/157 (0%)
Frame = +3
Query: 192 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 371
F+S+ + P+L+ I + GY+ PTPIQ + IP+ L G D++ A+TG+GKTA F +P+L+
Sbjct: 84 FRSLAIIEPILQAIEEEGYQTPTPIQAEAIPLILDGNDLLGCAQTGTGKTAAFAIPVLQL 143
Query: 372 L-LVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNV 548
L V N+ + +R+LI++PTRELA+Q + G+ TGLTS I GG + Q
Sbjct: 144 LNAVKTNEKK--RKIRSLIITPTRELAIQIGESFKAYGRHTGLTSTVIFGGVNQNPQTAS 201
Query: 549 MSGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
+ DI++ATPGR L + + L L NI V DE
Sbjct: 202 LQ-KGIDILIATPGRLLDLMNQGHLHLRNIEFFVLDE 237
>UniRef50_Q0G0P8 Cluster: Superfamily II DNA and RNA helicase; n=2;
Aurantimonadaceae|Rep: Superfamily II DNA and RNA
helicase - Fulvimarina pelagi HTCC2506
Length = 457
Score = 121 bits (291), Expect = 2e-26
Identities = 61/160 (38%), Positives = 95/160 (59%)
Frame = +3
Query: 180 SSGAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLP 359
+S F GL+ P+ + + + PTPIQ + IP AL G+D++ +A+TG+GKTA F LP
Sbjct: 2 TSTTFDGFGLAEPLTRALARLELTTPTPIQERAIPHALAGRDMLGIAQTGTGKTAAFALP 61
Query: 360 ILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQ 539
+L L+ KPT + +ALILSPTRELA+Q + +L + T ++ + GG S+ Q
Sbjct: 62 LLHHLMTVGGKPTT-RTTKALILSPTRELAVQIAESIADLSEGTPISHCVVFGGVSVRPQ 120
Query: 540 FNVMSGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
++ DI+VATPGR L + + ++ L ++ DE
Sbjct: 121 IQALA-RGVDILVATPGRLLDLMEQRAIDLRETRHLILDE 159
>UniRef50_Q21EB3 Cluster: DEAD/DEAH box helicase-like protein; n=2;
Gammaproteobacteria|Rep: DEAD/DEAH box helicase-like
protein - Saccharophagus degradans (strain 2-40 / ATCC
43961 / DSM 17024)
Length = 436
Score = 120 bits (290), Expect = 2e-26
Identities = 62/156 (39%), Positives = 94/156 (60%)
Frame = +3
Query: 192 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 371
F +GL + K + K + +PT +Q +TIP L GKD++ A+TGSGKTA F+LP+L K
Sbjct: 3 FSELGLHQSLQKALDKLTFTKPTDVQVQTIPAVLAGKDIMVSAKTGSGKTAAFLLPMLHK 62
Query: 372 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 551
L N P P + RALIL PTRELALQT++ + +T + I+GGE+ + Q +
Sbjct: 63 FL---NDPRPNTSTRALILLPTRELALQTVKAFEQFAGYTQIKVGLIMGGEAYKHQVATV 119
Query: 552 SGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
+P+++VATPGR + ++ ++ +V DE
Sbjct: 120 R-KNPEVLVATPGRLVEHIKNGNVDFSDLEFLVLDE 154
>UniRef50_Q22T03 Cluster: DEAD/DEAH box helicase family protein;
n=1; Tetrahymena thermophila SB210|Rep: DEAD/DEAH box
helicase family protein - Tetrahymena thermophila SB210
Length = 643
Score = 120 bits (290), Expect = 2e-26
Identities = 63/157 (40%), Positives = 101/157 (64%), Gaps = 1/157 (0%)
Frame = +3
Query: 192 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 371
+Q +GL P+LK + + Y+ PT IQ IP AL GKD++A + TGSGKTA F++PIL+K
Sbjct: 192 WQDLGLIKPLLKAVEEMQYEFPTNIQSLAIPAALQGKDLLASSLTGSGKTAAFLIPILQK 251
Query: 372 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 551
P + +ALI++PTRELA Q +L K+T L + ++G ++++Q +
Sbjct: 252 FY---RSPFTNYS-KALIVTPTRELAFQIYEVFTKLNKYTKLRACLVIGQSAMQKQEAEL 307
Query: 552 SGSSPDIVVATPGRFL-HICIEMSLKLDNIXIVVFDE 659
G +P++++ATPGR + H+ S+ LDN+ +++FDE
Sbjct: 308 RG-NPEVIIATPGRLIDHLQNSRSIDLDNLEVLIFDE 343
>UniRef50_A7AWJ7 Cluster: DEAD/DEAH box helicase and helicase
conserved C-terminal domain containing protein; n=1;
Babesia bovis|Rep: DEAD/DEAH box helicase and helicase
conserved C-terminal domain containing protein - Babesia
bovis
Length = 783
Score = 120 bits (290), Expect = 2e-26
Identities = 73/164 (44%), Positives = 101/164 (61%), Gaps = 5/164 (3%)
Frame = +3
Query: 183 SGAFQSMGLSFPVLKGIT-KRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLP 359
+GAF +GL + + K YKQP+ IQR+TIP L G+DVV +ARTGSGKTA ++ P
Sbjct: 21 TGAFGLLGLDRTLCYALEHKLRYKQPSTIQRRTIPAVLQGRDVVCIARTGSGKTAAYLAP 80
Query: 360 ILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFT----GLTSAAILGGES 527
+++ L+ + T G +R LIL PTRELALQ +++ FT L SA ++GGES
Sbjct: 81 VVQ--LLEGHSRTVG--VRCLILLPTRELALQVSSVLKKFIAFTKRDDALRSATLIGGES 136
Query: 528 IEQQFNVMSGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
+E QF ++ +PD+VVATPGR E S+ L + V DE
Sbjct: 137 VEGQFGALT-FNPDLVVATPGRLSQHIAEKSIDLTLVTHFVIDE 179
>UniRef50_Q31EF0 Cluster: ATP-dependent RNA helicase; n=1;
Thiomicrospira crunogena XCL-2|Rep: ATP-dependent RNA
helicase - Thiomicrospira crunogena (strain XCL-2)
Length = 401
Score = 120 bits (288), Expect = 4e-26
Identities = 66/156 (42%), Positives = 96/156 (61%)
Frame = +3
Query: 192 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 371
F+ + L +L I ++ Y +PTPIQ + IP L KDV+A A TG+GKTA FVLP L+
Sbjct: 3 FEELDLDPKLLTAIEEQHYHKPTPIQAEAIPEMLLSKDVLAGAATGTGKTAAFVLPALQF 62
Query: 372 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 551
LL + P P + R LIL+PTRELA Q + V++LG S + GG + ++Q ++
Sbjct: 63 LL---DDPRPSRKPRVLILAPTRELAFQIHKVVKQLGAHCPFESNVVTGGFASDKQLEIL 119
Query: 552 SGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
S DI+VATPGR L+I + + L +I +++ DE
Sbjct: 120 Q-SKIDILVATPGRLLNIMSKEFIDLSDIELLIIDE 154
>UniRef50_Q1MYS3 Cluster: Probable ATP-dependent RNA helicase; n=1;
Oceanobacter sp. RED65|Rep: Probable ATP-dependent RNA
helicase - Oceanobacter sp. RED65
Length = 449
Score = 120 bits (288), Expect = 4e-26
Identities = 65/156 (41%), Positives = 94/156 (60%)
Frame = +3
Query: 192 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 371
FQS L +LKGI G+ + T +Q++TIP AL +D++ ARTGSGKTA FV+P+L+
Sbjct: 2 FQSFSLDQRILKGIEALGFTKATDVQQQTIPEALKQQDLMVCARTGSGKTAAFVVPMLQH 61
Query: 372 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 551
LL P RALIL PTRELA Q L+ + L KFTG+ S I GG+ + Q +
Sbjct: 62 LL---THKAPNSGTRALILVPTRELAKQLLKQCQALAKFTGIQSGMITGGQEFKFQ-AAL 117
Query: 552 SGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
+P+I++ATPGR + + ++++ + DE
Sbjct: 118 FRKNPEIIIATPGRLIDHLKQKKDLMEDVEYFILDE 153
>UniRef50_P96614 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=90; Bacilli|Rep: DEAD-box ATP-dependent RNA helicase
ydbR - Bacillus subtilis
Length = 494
Score = 120 bits (288), Expect = 4e-26
Identities = 60/156 (38%), Positives = 99/156 (63%)
Frame = +3
Query: 192 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 371
FQ LS ++K I + G+++ TPIQ +TIP+ L+ KDV+ A+TG+GKTA F +P++EK
Sbjct: 5 FQDFNLSSDLMKAINRMGFEEATPIQAQTIPLGLSNKDVIGQAQTGTGKTAAFGIPLVEK 64
Query: 372 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 551
+ N +P N++A++++PTRELA+Q + ++G+ I GG+ I +Q +
Sbjct: 65 I----NPESP--NIQAIVIAPTRELAIQVSEELYKIGQDKRAKVLPIYGGQDIGRQIRAL 118
Query: 552 SGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
+P+I+V TPGR L +++L+N+ VV DE
Sbjct: 119 K-KNPNIIVGTPGRLLDHINRRTIRLNNVNTVVMDE 153
>UniRef50_Q2BMZ1 Cluster: ATP-dependent RNA helicase; n=1;
Neptuniibacter caesariensis|Rep: ATP-dependent RNA
helicase - Neptuniibacter caesariensis
Length = 417
Score = 119 bits (287), Expect = 5e-26
Identities = 74/160 (46%), Positives = 96/160 (60%), Gaps = 3/160 (1%)
Frame = +3
Query: 189 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILE 368
+F S+GLS ++ GYK+PT IQ K IP L G D++A A TGSGKTA FVLP+LE
Sbjct: 2 SFVSLGLSDFFTSTLSSLGYKEPTAIQDKAIPAVLKGHDLIAAAETGSGKTAGFVLPLLE 61
Query: 369 KLLVPNNKPTPGKNL-RALILSPTRELALQTLRFVRELGKF--TGLTSAAILGGESIEQQ 539
KL ++ P PG NL AL+L PTRELA+Q + V + + S AI GG +I Q
Sbjct: 62 KL---HSIPAPGNNLTHALVLVPTRELAVQVSQSVDRYSENCPRKIRSVAIYGGAAINPQ 118
Query: 540 FNVMSGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
+S DIVVATPGR L + + +L L + +V DE
Sbjct: 119 MQSLS-KGCDIVVATPGRLLDLMRKNALDLRGLKALVLDE 157
>UniRef50_A6NQG8 Cluster: Putative uncharacterized protein; n=2;
Bacteroidales|Rep: Putative uncharacterized protein -
Bacteroides capillosus ATCC 29799
Length = 636
Score = 119 bits (287), Expect = 5e-26
Identities = 66/156 (42%), Positives = 93/156 (59%)
Frame = +3
Query: 192 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 371
F+ +GL+ +LK + + GY++P+PIQ K IP AL G+DV+ A+TG+GKT F PIL++
Sbjct: 3 FRELGLTQSILKALAELGYEKPSPIQEKAIPPALAGRDVLGCAQTGTGKTCAFAAPILQR 62
Query: 372 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 551
L G+ +R+LIL+PTRELALQ GK L SA I GG + Q + +
Sbjct: 63 L---GGDIPAGRPIRSLILTPTRELALQIQESFEAYGKHLPLRSAVIFGGVGQQPQVDKL 119
Query: 552 SGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
DI+VATPGR L + + + L + I V DE
Sbjct: 120 K-KGVDILVATPGRLLDLQGQGFVDLSRLEIFVLDE 154
>UniRef50_A2U4F0 Cluster: Putative ATP-dependent RNA helicase; n=2;
Polaribacter|Rep: Putative ATP-dependent RNA helicase -
Polaribacter dokdonensis MED152
Length = 411
Score = 119 bits (287), Expect = 5e-26
Identities = 59/156 (37%), Positives = 95/156 (60%)
Frame = +3
Query: 192 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 371
F + L+ + K I + + +PT +Q KTIP+ L K+V+ A+TG+GKTA F LPI+
Sbjct: 3 FSDIPLNKSIQKAIAEARFHKPTLVQEKTIPLVLDKKNVIVAAQTGTGKTAAFALPIINL 62
Query: 372 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 551
L + K ++AL+++PTRELA+Q L + K++ L S A+ GG S+E Q ++
Sbjct: 63 LFDKQDAEKGEKKIKALVITPTRELAIQILENFKSYSKYSNLRSTAVFGGVSLEPQKEIL 122
Query: 552 SGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
+ DI+VATPGR + + ++ ++ L + I V DE
Sbjct: 123 A-KGVDILVATPGRLIDLQMQGNIDLSQLEIFVLDE 157
>UniRef50_Q8YH70 Cluster: ATP-DEPENDENT RNA HELICASE RHLE; n=10;
Rhizobiales|Rep: ATP-DEPENDENT RNA HELICASE RHLE -
Brucella melitensis
Length = 535
Score = 119 bits (286), Expect = 7e-26
Identities = 63/160 (39%), Positives = 100/160 (62%)
Frame = +3
Query: 180 SSGAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLP 359
++G F ++G++ +LKG+ G +P PIQ + IP L G+D++ +A+TGSGKTA F LP
Sbjct: 85 NTGGFAALGITGVLLKGVEAAGMTEPKPIQTQAIPSQLEGQDILGIAQTGSGKTAAFSLP 144
Query: 360 ILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQ 539
IL+K++ +K P K RALIL+PTRELA+Q + +R + K +++A +LGG S Q
Sbjct: 145 ILQKIIGLGDKRRP-KTARALILAPTRELAVQIEQTIRNVSKSAHISTALVLGGVSKLSQ 203
Query: 540 FNVMSGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
++ D+++ATPGR + + + L +V DE
Sbjct: 204 IKRIA-PGIDVLIATPGRLTDLMRDGLVDLSQTRWLVLDE 242
>UniRef50_Q6APU7 Cluster: Related to ATP-dependent RNA helicase;
n=1; Desulfotalea psychrophila|Rep: Related to
ATP-dependent RNA helicase - Desulfotalea psychrophila
Length = 498
Score = 119 bits (286), Expect = 7e-26
Identities = 56/156 (35%), Positives = 91/156 (58%)
Frame = +3
Query: 192 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 371
F + P++ GI ++ TPIQ +++ L GKD++ A TG+GKTA F++ ++ +
Sbjct: 96 FHDFAIPLPLMHGIADLKFEYCTPIQEQSLEAVLAGKDLIGKANTGTGKTAVFLVGVMAR 155
Query: 372 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 551
LL + RALIL+PTREL +Q ++ ++LG++TG+ + A+ GG E+Q ++
Sbjct: 156 LLADKKGGLGKRTPRALILAPTRELVMQIVKDAKKLGRYTGVNADAVYGGAEYEKQMELL 215
Query: 552 SGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
DIVVATPGR + + + DN +V DE
Sbjct: 216 KRGKTDIVVATPGRLIDFHNKRLVNFDNCQTLVIDE 251
>UniRef50_Q9N478 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 732
Score = 119 bits (286), Expect = 7e-26
Identities = 66/157 (42%), Positives = 93/157 (59%), Gaps = 1/157 (0%)
Frame = +3
Query: 192 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 371
F+ LS+ L+G+ Y +PT IQR TI +LTG DVV A+TGSGKT V+P+LE
Sbjct: 78 FEDFPLSWRTLEGLKDNDYTKPTEIQRDTIAYSLTGSDVVGAAKTGSGKTLALVIPVLEA 137
Query: 372 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 551
L K +P L ALI+SPTRELALQT + +G G + ++GG + + N +
Sbjct: 138 LW--RAKWSPDYGLGALIISPTRELALQTFSTINAVGAHHGFSCGLVIGGSDVAFERNRI 195
Query: 552 SGSSPDIVVATPGRFL-HICIEMSLKLDNIXIVVFDE 659
SG +I+V TPGR L H+ + D++ ++V DE
Sbjct: 196 SGI--NIIVCTPGRLLQHMDENAQMSCDSLQVLVLDE 230
>UniRef50_Q2BP56 Cluster: Putative ATP-dependent RNA helicase; n=1;
Neptuniibacter caesariensis|Rep: Putative ATP-dependent
RNA helicase - Neptuniibacter caesariensis
Length = 427
Score = 118 bits (285), Expect = 9e-26
Identities = 64/161 (39%), Positives = 98/161 (60%), Gaps = 1/161 (0%)
Frame = +3
Query: 180 SSGAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLP 359
S+ +F + L + + GY+QPTPIQ + IP+ L G D++A A+TG+GKTA F LP
Sbjct: 2 SASSFAELALCPELQFTLKNLGYEQPTPIQSQAIPLVLRGDDLLAEAQTGTGKTASFALP 61
Query: 360 ILEKLLVPNNKPTPG-KNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQ 536
I+EKL + P G + +RAL+L+PTRELA+Q E G+ G+ ++ GG +E
Sbjct: 62 IIEKL---SKNPIDGYRPVRALVLAPTRELAIQVADNTLEYGRDLGMRVISVYGGVPVEN 118
Query: 537 QFNVMSGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
Q + + DI+VATPGR L + + ++ L+ + +V DE
Sbjct: 119 QIKRLKRGT-DILVATPGRLLDLLRQKAISLEKLEYLVLDE 158
>UniRef50_Q1JSQ3 Cluster: Dead-box helicase, putative; n=1;
Toxoplasma gondii|Rep: Dead-box helicase, putative -
Toxoplasma gondii
Length = 822
Score = 118 bits (284), Expect = 1e-25
Identities = 66/158 (41%), Positives = 97/158 (61%), Gaps = 1/158 (0%)
Frame = +3
Query: 189 AFQSMGLSFPV-LKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPIL 365
AF+++GLS P L I G+ QPTPIQR+ IP+ L GKD + M+RTGSGKTACF+LP+L
Sbjct: 25 AFETLGLSTPTSLAAIKGLGFSQPTPIQRRAIPLLLKGKDCILMSRTGSGKTACFLLPLL 84
Query: 366 EKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFN 545
+ L+ + G +RA++++PTREL Q R +L + L +LGGE+ +QF
Sbjct: 85 D--LLGEHSSVVG--VRAVLIAPTRELVAQIHRVCSKLLHSSSLRVCCLLGGENYSKQFL 140
Query: 546 VMSGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
+S +PD+++ T GR + + L L +V DE
Sbjct: 141 ALS-RNPDVLLTTVGRGSQLIHDKVLSLSAARFLVLDE 177
>UniRef50_Q0AVQ9 Cluster: ATP-dependent RNA helicase; n=1;
Syntrophomonas wolfei subsp. wolfei str. Goettingen|Rep:
ATP-dependent RNA helicase - Syntrophomonas wolfei
subsp. wolfei (strain Goettingen)
Length = 530
Score = 118 bits (283), Expect = 2e-25
Identities = 65/156 (41%), Positives = 96/156 (61%)
Frame = +3
Query: 192 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 371
F SMGL +L+ I ++G+++PTPIQ K+IPIA+ G D++ A+TG+GKTA F +PIL
Sbjct: 6 FYSMGLKTDLLQMIDEKGFEKPTPIQVKSIPIAMAGLDLMGQAQTGTGKTASFGIPIL-- 63
Query: 372 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 551
N+ G+ L+AL+L PTRELA+Q + L + + AI GG+SIE Q +
Sbjct: 64 -----NRVIKGEGLQALVLCPTRELAVQVTEEISSLSRRMRIQVLAIYGGQSIELQLRSL 118
Query: 552 SGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
+P+I+V TPGR + ++ L + VV DE
Sbjct: 119 R-RNPEIIVGTPGRLMDHMNRGTISLSPLKYVVLDE 153
>UniRef50_A7CSF3 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Opitutaceae bacterium TAV2|Rep: DEAD/DEAH box
helicase domain protein - Opitutaceae bacterium TAV2
Length = 343
Score = 118 bits (283), Expect = 2e-25
Identities = 62/157 (39%), Positives = 95/157 (60%), Gaps = 1/157 (0%)
Frame = +3
Query: 192 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 371
F +GL +++G+ GY PTP+Q + IP+ L G+D+VA A+TG+GKTA F LP+L +
Sbjct: 3 FSKLGLPSSLVRGVQAMGYVDPTPVQLRAIPVVLAGRDLVASAQTGTGKTAAFALPVLAR 62
Query: 372 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESI-EQQFNV 548
L PG R L+L PTREL Q R+ G+FT + S I GG +Q+ ++
Sbjct: 63 L----GGHRPG-GPRVLVLEPTRELGAQVETAFRDFGRFTDVRSTIIHGGVGYGKQRSDL 117
Query: 549 MSGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
+G+ DIV+AT GR + E ++LD++ +++ DE
Sbjct: 118 RAGT--DIVIATVGRLMDFIKEKEIRLDSVEVLILDE 152
>UniRef50_A4SWL3 Cluster: DEAD/DEAH box helicase domain protein;
n=3; Proteobacteria|Rep: DEAD/DEAH box helicase domain
protein - Polynucleobacter sp. QLW-P1DMWA-1
Length = 500
Score = 118 bits (283), Expect = 2e-25
Identities = 62/160 (38%), Positives = 97/160 (60%), Gaps = 4/160 (2%)
Frame = +3
Query: 192 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 371
FQ+ L+ +LK + + G+ Q T +Q + IP AL G D++ ++TGSGKTA F+LP++ +
Sbjct: 21 FQNFALAASLLKNVAELGFTQATSVQAQVIPAALAGGDLLVSSQTGSGKTAAFLLPLINQ 80
Query: 372 LLV--PNNKPTPGK-NLRALILSPTRELALQTLRFVRELGK-FTGLTSAAILGGESIEQQ 539
L+ PNN P PG+ + L+L PTRELA Q L + G+ A ++GG +Q
Sbjct: 81 LIEDNPNNSPVPGRAQPKVLVLCPTRELAQQVAADAVNLVRGMKGIRIATVMGGMPYGKQ 140
Query: 540 FNVMSGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
+ G+ +VVATPGR L +C +++LD++ +V DE
Sbjct: 141 IQALKGAL--LVVATPGRLLDLCDSKAIRLDDVKQLVIDE 178
>UniRef50_Q4N0E9 Cluster: ATP-dependent RNA helicase, putative; n=2;
Theileria|Rep: ATP-dependent RNA helicase, putative -
Theileria parva
Length = 839
Score = 117 bits (282), Expect = 2e-25
Identities = 71/163 (43%), Positives = 100/163 (61%), Gaps = 5/163 (3%)
Frame = +3
Query: 186 GAFQSMGLSFPVLKGITKR-GYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPI 362
G F ++GL P+ + KR Y QP+ IQRKTIP L G DV+ +ARTGSGKT ++ PI
Sbjct: 9 GPFGTLGLKKPICLTLQKRLRYDQPSAIQRKTIPHILAGSDVLCIARTGSGKTVAYIAPI 68
Query: 363 LEKLLVPNNKPTPGKNLRALILSPTRELALQT----LRFVRELGKFTGLTSAAILGGESI 530
++ L+ + P G +R LIL PTRELALQ +FV + L + ++GG+S+
Sbjct: 69 VQ--LLDFHSPVVG--VRCLILLPTRELALQVEGVLKKFVNFSNQDDALRVSLLIGGKSV 124
Query: 531 EQQFNVMSGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
E QF +S +PDIV+ATPGR ++ + SL L + +V DE
Sbjct: 125 ESQFGSLS-FNPDIVIATPGRLVYHLEQKSLTLSLLTHLVIDE 166
>UniRef50_A2SQE1 Cluster: DEAD/DEAH box helicase domain protein;
n=6; cellular organisms|Rep: DEAD/DEAH box helicase
domain protein - Methanocorpusculum labreanum (strain
ATCC 43576 / DSM 4855 / Z)
Length = 656
Score = 117 bits (282), Expect = 2e-25
Identities = 66/157 (42%), Positives = 95/157 (60%), Gaps = 1/157 (0%)
Frame = +3
Query: 192 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 371
F +S +L+ I G+++PTPIQ IP L GKDV A+TG+GKTA F +PI+E+
Sbjct: 7 FAEFAISEELLQAIGDMGFEEPTPIQAMAIPQILDGKDVTGQAQTGTGKTAAFGIPIIER 66
Query: 372 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKF-TGLTSAAILGGESIEQQFNV 548
L P+N KN++AL+LSPTRELA+QT L K+ GL I GG+ IE+Q
Sbjct: 67 -LDPDN-----KNVQALVLSPTRELAIQTAEEFSRLMKYKKGLNVVPIYGGQPIERQLRA 120
Query: 549 MSGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
+ G + +V+ TPGR + +L LD++ + + DE
Sbjct: 121 LKG-TVQVVIGTPGRVIDHIKRGTLHLDSVTMFILDE 156
>UniRef50_Q11UP8 Cluster: ATP-dependent RNA helicase; n=1; Cytophaga
hutchinsonii ATCC 33406|Rep: ATP-dependent RNA helicase
- Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB
9469)
Length = 580
Score = 117 bits (281), Expect = 3e-25
Identities = 66/157 (42%), Positives = 95/157 (60%), Gaps = 1/157 (0%)
Frame = +3
Query: 192 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 371
F+ +GLS V++ I GY + TPIQ KTIPI +TGKD+ A+TG+GKTA F +P +E
Sbjct: 3 FKDLGLSPEVVEAIESIGYSEATPIQEKTIPILMTGKDLTGQAQTGTGKTAAFGIPAIEH 62
Query: 372 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKF-TGLTSAAILGGESIEQQFNV 548
+ + N+ ++LIL PTRELALQ +++L KF GL A+ GGESIE+Q
Sbjct: 63 VDISINQ------TQSLILCPTRELALQVCTELKKLSKFKKGLRVLAVYGGESIERQIRD 116
Query: 549 MSGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
+ + IVV TPGR + +L ++ ++ DE
Sbjct: 117 LKAGA-HIVVGTPGRIIDHLDRRTLNASHLSQIILDE 152
>UniRef50_Q11U28 Cluster: ATP-dependent RNA helicase protein; n=4;
Bacteria|Rep: ATP-dependent RNA helicase protein -
Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)
Length = 413
Score = 117 bits (281), Expect = 3e-25
Identities = 60/157 (38%), Positives = 99/157 (63%), Gaps = 1/157 (0%)
Frame = +3
Query: 192 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 371
F+S L+ + K + + G+ +PT IQ K+IP L G+DV+A+A+TG+GKTA FV+P+L
Sbjct: 3 FESYDLAPGIKKSLAEAGFNRPTDIQFKSIPPILAGEDVLAIAQTGTGKTAAFVIPVLNT 62
Query: 372 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 551
L+ N K + ++ L+++PTRELA+Q +++G +T L + I GG +EQ+ +
Sbjct: 63 LI--NVKKSEHTDISCLVMAPTRELAVQISEVFKKIGAYTRLRTVCITGG--VEQEAQIA 118
Query: 552 SGS-SPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
+ DI+VATPGR + + +K+ + I+V DE
Sbjct: 119 AADYGIDILVATPGRMFDLIYQKHIKITRVKILVLDE 155
>UniRef50_A0RP33 Cluster: Putative ATP-dependent RNA helicase RhlE;
n=1; Campylobacter fetus subsp. fetus 82-40|Rep:
Putative ATP-dependent RNA helicase RhlE - Campylobacter
fetus subsp. fetus (strain 82-40)
Length = 624
Score = 117 bits (281), Expect = 3e-25
Identities = 67/157 (42%), Positives = 90/157 (57%), Gaps = 1/157 (0%)
Frame = +3
Query: 192 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 371
F LS +L+ + + Y PT IQ+ IP + GKD++A ARTG+GKTA F LPILEK
Sbjct: 3 FSDFDLSSAILEALKELNYDAPTQIQQVAIPAIMQGKDILAGARTGTGKTAAFALPILEK 62
Query: 372 L-LVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNV 548
L NK P R L+L PTRELA Q + ++ K + + GG S Q
Sbjct: 63 LSSKERNKKRP--QTRVLVLVPTRELANQVTQNIKSYAKKLPFKTLPVFGGVSSYPQIQA 120
Query: 549 MSGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
+ S DIVVATPGR L + ++ +L L++I +VFDE
Sbjct: 121 LK-SGIDIVVATPGRLLDLALQNALSLEHIDTLVFDE 156
>UniRef50_A0C321 Cluster: Chromosome undetermined scaffold_146,
whole genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_146,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 564
Score = 117 bits (281), Expect = 3e-25
Identities = 65/157 (41%), Positives = 95/157 (60%), Gaps = 1/157 (0%)
Frame = +3
Query: 192 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 371
F + L+ ++K +GY PT +Q K IPI + GKDV+A + TGSGKTA F+LPI+++
Sbjct: 118 FHQLKLNKALVKACHDQGYTHPTNVQAKIIPIIMNGKDVLASSCTGSGKTAAFLLPIMQR 177
Query: 372 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 551
N + +ALI+ PTRELALQ +L K+ T+A ++G I+QQ +
Sbjct: 178 FGNLKNL----QYSKALIILPTRELALQCFEMFEKLNKYANCTAALVIGAVPIQQQETEL 233
Query: 552 SGSSPDIVVATPGRFLHICI-EMSLKLDNIXIVVFDE 659
PDI++ATPGR + + SL++ NI I+VFDE
Sbjct: 234 R-KYPDIIIATPGRTVDLLTNSSSLEIQNIEILVFDE 269
>UniRef50_Q81VG0 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=16; cellular organisms|Rep: DEAD-box ATP-dependent RNA
helicase ydbR - Bacillus anthracis
Length = 528
Score = 117 bits (281), Expect = 3e-25
Identities = 60/156 (38%), Positives = 96/156 (61%)
Frame = +3
Query: 192 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 371
F+ +GLS +L+ + G+++ TPIQ +TIP AL GKD++ A+TG+GKTA F LP+L+K
Sbjct: 4 FRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLDK 63
Query: 372 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 551
+ T ++++ ++++PTRELA+Q + ++GK + I GG+ I +Q +
Sbjct: 64 V------DTHKESVQGIVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRAL 117
Query: 552 SGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
P I+V TPGR L +L+L N+ VV DE
Sbjct: 118 K-KHPHIIVGTPGRILDHINRKTLRLQNVETVVLDE 152
>UniRef50_Q3AFI3 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=1; Carboxydothermus hydrogenoformans
Z-2901|Rep: ATP-dependent RNA helicase, DEAD box family
- Carboxydothermus hydrogenoformans (strain Z-2901 / DSM
6008)
Length = 430
Score = 116 bits (280), Expect = 4e-25
Identities = 60/156 (38%), Positives = 95/156 (60%)
Frame = +3
Query: 192 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 371
F+ +GL P+LK + G++ PTPIQ++ IP+ L G ++V A TG+GKTA ++LP+L++
Sbjct: 4 FKKLGLITPLLKAVNDLGFEMPTPIQKEAIPLILEGHNLVGQAPTGTGKTAAYLLPVLQR 63
Query: 372 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 551
+ GK + LI++PTRELALQ V +LGK+ + + A+ GG++IE+Q +
Sbjct: 64 I-------QRGKKAQVLIVTPTRELALQVADEVAKLGKYLKVRALAVYGGQAIERQIRGL 116
Query: 552 SGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
+++V TPGR L + I IV+ DE
Sbjct: 117 R-QGVEVIVGTPGRILDHIGRKTFPAAEIKIVILDE 151
>UniRef50_A4LYS0 Cluster: DEAD/DEAH box helicase domain protein;
n=4; Desulfuromonadales|Rep: DEAD/DEAH box helicase
domain protein - Geobacter bemidjiensis Bem
Length = 482
Score = 116 bits (280), Expect = 4e-25
Identities = 65/157 (41%), Positives = 94/157 (59%), Gaps = 1/157 (0%)
Frame = +3
Query: 192 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 371
F + + V KGI + G+ Q TPIQ K +P+ALTGKDV A+TG+GKTA F++ I K
Sbjct: 3 FTELQIPAEVQKGIDETGFTQCTPIQEKALPLALTGKDVAGQAQTGTGKTATFLISIFTK 62
Query: 372 LLVPNNKPTPGK-NLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNV 548
LL + T G+ + RALIL+PTREL +Q + + LGK+TG AI GG +Q +
Sbjct: 63 LL--SQAKTGGEHHPRALILAPTRELVVQIEKDAQALGKYTGFNIQAIYGGVDYMKQRDA 120
Query: 549 MSGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
+ + DIV+ TPGR + + + ++ +V DE
Sbjct: 121 LKAGA-DIVIGTPGRLIDYLKQKVYSVKDVEALVIDE 156
>UniRef50_Q8EZ11 Cluster: ATP-dependent RNA helicase; n=4;
Leptospira|Rep: ATP-dependent RNA helicase - Leptospira
interrogans
Length = 521
Score = 116 bits (279), Expect = 5e-25
Identities = 65/157 (41%), Positives = 93/157 (59%), Gaps = 1/157 (0%)
Frame = +3
Query: 192 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 371
F + LS + I + G+++ +PIQ + IP+ L GKD++ A+TG+GKTA F +P +E
Sbjct: 11 FSELNLSAEIQNAILEMGFEEASPIQSEAIPVILKGKDIIGHAQTGTGKTAAFAIPTIEL 70
Query: 372 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTG-LTSAAILGGESIEQQFNV 548
L V + K+L+ALIL PTREL +Q R+L K+ G I GG+ IE+Q
Sbjct: 71 LEVES------KHLQALILCPTRELVIQVSEQFRKLIKYKGNFEVVPIYGGQEIERQLRA 124
Query: 549 MSGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
+ +P IV+ATPGR + S+ LD I IVV DE
Sbjct: 125 LR-KNPQIVIATPGRMMDHMRRGSIHLDEIKIVVLDE 160
>UniRef50_Q39MK8 Cluster: DEAD/DEAH box helicase; n=10;
Proteobacteria|Rep: DEAD/DEAH box helicase -
Burkholderia sp. (strain 383) (Burkholderia cepacia
(strain ATCC 17760/ NCIB 9086 / R18194))
Length = 481
Score = 116 bits (279), Expect = 5e-25
Identities = 65/157 (41%), Positives = 91/157 (57%)
Frame = +3
Query: 189 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILE 368
+F S+GL P+L+ + Y+ PTP+Q K IP L GKDV+A A+TG+GKTA F LP+L+
Sbjct: 2 SFASLGLIDPLLRNLQDLNYQAPTPVQAKAIPAVLGGKDVMAGAQTGTGKTAGFALPLLQ 61
Query: 369 KLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNV 548
+ LV + R L+L PTRELA Q L+ GK L A GG SI Q
Sbjct: 62 R-LVQHGPAVSSNRARVLVLVPTRELAEQVLQSFIAYGKGLDLRFLAAYGGVSINPQMMK 120
Query: 549 MSGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
+ D++VATPGR L + + +++ D + +V DE
Sbjct: 121 LR-KGVDVLVATPGRLLDLNRQNAVQFDQVQTLVLDE 156
>UniRef50_A4FZ46 Cluster: DEAD/DEAH box helicase domain protein;
n=4; Euryarchaeota|Rep: DEAD/DEAH box helicase domain
protein - Methanococcus maripaludis
Length = 541
Score = 116 bits (279), Expect = 5e-25
Identities = 64/158 (40%), Positives = 95/158 (60%), Gaps = 1/158 (0%)
Frame = +3
Query: 189 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGK-DVVAMARTGSGKTACFVLPIL 365
+F+++GLS +L+ + K+G+ PTPIQ + IPI + GK D+V A+TG+GKTA F +PIL
Sbjct: 3 SFKNLGLSDEILEALEKKGFTTPTPIQEQAIPILIEGKRDIVGQAQTGTGKTAAFGIPIL 62
Query: 366 EKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFN 545
E + +N +ALIL+PTRELA+Q + + L + GG+SI++Q
Sbjct: 63 ETI------DESSRNTQALILAPTRELAIQVAEEIDSIKGSKRLNVFPVYGGQSIDRQIR 116
Query: 546 VMSGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
+ IVV TPGR L ++KL+N+ VV DE
Sbjct: 117 ELR-RGVQIVVGTPGRILDHISRRTIKLENVSYVVLDE 153
>UniRef50_Q6MR64 Cluster: ATP-dependent RNA helicase; n=5; cellular
organisms|Rep: ATP-dependent RNA helicase - Bdellovibrio
bacteriovorus
Length = 505
Score = 116 bits (278), Expect = 7e-25
Identities = 64/156 (41%), Positives = 88/156 (56%)
Frame = +3
Query: 192 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 371
F + L P+ + + GY+ PTPIQ IP+ L G D++ +A+TG+GKTA F LPIL+
Sbjct: 6 FTDLPLIAPLQFSLKEAGYETPTPIQLAAIPVILEGHDLLGIAQTGTGKTAAFSLPILQN 65
Query: 372 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 551
L K P K+ R LIL+PTRELA+Q + K + A I GG Q +
Sbjct: 66 LSKHTRKIEP-KSPRCLILTPTRELAIQIHENIEAYSKHLNMKHAVIFGGVGQNPQVRAL 124
Query: 552 SGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
G DI++ATPGR + + + LKLD + I V DE
Sbjct: 125 QG-GVDILIATPGRLMDLHGQKHLKLDRVEIFVLDE 159
>UniRef50_Q5NML9 Cluster: DNA and RNA helicase; n=28;
Alphaproteobacteria|Rep: DNA and RNA helicase -
Zymomonas mobilis
Length = 458
Score = 116 bits (278), Expect = 7e-25
Identities = 62/160 (38%), Positives = 96/160 (60%)
Frame = +3
Query: 180 SSGAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLP 359
+S +F+++GL +++ + GY +PTPIQ + IP L GKD+ +A+TG+GKTA F LP
Sbjct: 4 TSVSFKTLGLDSSLVQALDGLGYSKPTPIQAQAIPHLLEGKDLCGIAQTGTGKTAAFALP 63
Query: 360 ILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQ 539
+ L N + P + R LILSPTRELA Q R + + ++ A+ GG I +Q
Sbjct: 64 SIH-YLATNPQARPQRGCRMLILSPTRELASQIARACNDYTRHLRMSVNAVFGGVPIGRQ 122
Query: 540 FNVMSGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
++ + DI+VATPGR L + + +L L ++ + V DE
Sbjct: 123 MRMLDRGT-DILVATPGRLLDLIDQRALVLKDVEVFVLDE 161
>UniRef50_Q1MY97 Cluster: DEAD/DEAH box helicase-like protein; n=2;
Gammaproteobacteria|Rep: DEAD/DEAH box helicase-like
protein - Oceanobacter sp. RED65
Length = 614
Score = 116 bits (278), Expect = 7e-25
Identities = 67/161 (41%), Positives = 93/161 (57%), Gaps = 1/161 (0%)
Frame = +3
Query: 180 SSGAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLP 359
SS F S+GL F +L+ I ++GY+QP+PIQ ++IP L GKDV+ +A+TG+GKTA F LP
Sbjct: 4 SSTGFASLGLPFNLLRAIEEQGYEQPSPIQEQSIPHLLEGKDVLGLAQTGTGKTAAFTLP 63
Query: 360 ILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKF-TGLTSAAILGGESIEQ 536
+L + +P + L+L+PTRELA Q V K + + A+I GG
Sbjct: 64 LLARTQNEVREP------QVLVLAPTRELAQQVAMAVESYSKHESNVKVASIYGGSDFGS 117
Query: 537 QFNVMSGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
QF + P VV TPGR + +LKL+ I VV DE
Sbjct: 118 QFRALK-QGPQWVVGTPGRVMDHIRRGTLKLEGIRAVVLDE 157
>UniRef50_A2DH37 Cluster: DEAD/DEAH box helicase family protein;
n=2; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 541
Score = 116 bits (278), Expect = 7e-25
Identities = 59/156 (37%), Positives = 89/156 (57%)
Frame = +3
Query: 192 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 371
F G+ VL+ + GYK PTP+QR +IP L G+D++ ++TGSGKTA F+LP++ +
Sbjct: 123 FPGCGIRNEVLRNVAHNGYKVPTPVQRYSIPYILNGEDLIVTSQTGSGKTAAFMLPVITQ 182
Query: 372 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 551
L+ + P P + L PTRELA+Q R+ K T L + + GG I +Q +
Sbjct: 183 LIGTCHSPNPS----CVALCPTRELAIQIFEETRKFCKGTDLKTTCVFGGAPITEQIRNL 238
Query: 552 SGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
S DIV+ATPGR + I + + L + ++ DE
Sbjct: 239 S-RGIDIVIATPGRLIDILKQHCITLSEVRFLILDE 273
>UniRef50_Q6MN50 Cluster: ATP-dependent RNA helicase; n=1;
Bdellovibrio bacteriovorus|Rep: ATP-dependent RNA
helicase - Bdellovibrio bacteriovorus
Length = 656
Score = 115 bits (277), Expect = 9e-25
Identities = 66/157 (42%), Positives = 92/157 (58%), Gaps = 1/157 (0%)
Frame = +3
Query: 192 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTG-KDVVAMARTGSGKTACFVLPILE 368
F+S GLS PV+ + G+ PTPIQR+ +PI L G D + +A TG+GKTA F +P++E
Sbjct: 46 FESFGLSAPVMAAMADMGFTTPTPIQRQALPILLAGANDFIGLASTGTGKTAAFGIPLIE 105
Query: 369 KLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNV 548
N + K+ +AL+LSPTRELALQ + LGK G+ I GG S Q +
Sbjct: 106 ------NIDSTVKDTQALVLSPTRELALQVAEQLTLLGKKKGVRVVTIYGGASYRTQIDG 159
Query: 549 MSGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
+ + IVVATPGR + + +KL ++ VV DE
Sbjct: 160 IKRGA-HIVVATPGRLVDFLEQKMIKLQSVKTVVLDE 195
>UniRef50_Q0HKH0 Cluster: DEAD/DEAH box helicase domain protein;
n=37; Gammaproteobacteria|Rep: DEAD/DEAH box helicase
domain protein - Shewanella sp. (strain MR-4)
Length = 427
Score = 115 bits (277), Expect = 9e-25
Identities = 64/162 (39%), Positives = 90/162 (55%), Gaps = 2/162 (1%)
Frame = +3
Query: 180 SSGAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLP 359
S +F +G+ P+ +T+ Y PTPIQ TIP L+G+DV+A A TGSGKTA F +P
Sbjct: 7 SVASFAELGIIAPLCNRLTELTYAAPTPIQAATIPAVLSGRDVLAGANTGSGKTAAFAVP 66
Query: 360 ILEKLLVPNNKPTPGKNLRALILSPTRELALQTL-RFVRELGKFTG-LTSAAILGGESIE 533
+L++L +R L+L PTRELA Q F+ F G L A GG S+
Sbjct: 67 LLQRLFEAKTAEKSAGQVRCLVLVPTRELAQQVADSFLSYASHFNGQLKIVAAFGGVSVN 126
Query: 534 QQFNVMSGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
Q + + D++VATPGR L + +LKL+ + +V DE
Sbjct: 127 LQMQSLRAGA-DVLVATPGRLLDLLASNALKLNRVLALVLDE 167
>UniRef50_A7CUH7 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Opitutaceae bacterium TAV2|Rep: DEAD/DEAH box
helicase domain protein - Opitutaceae bacterium TAV2
Length = 536
Score = 115 bits (277), Expect = 9e-25
Identities = 63/157 (40%), Positives = 90/157 (57%)
Frame = +3
Query: 189 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILE 368
AF +GL+ + +T+ GY +PTPIQ + +P L G+DV A+TG+GKTA F LPIL
Sbjct: 134 AFSKLGLNDALAFAVTEMGYTEPTPIQAQAVPAVLAGRDVTGSAQTGTGKTAAFALPILH 193
Query: 369 KLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNV 548
KL + LR L+L PTRELALQ ++ K+T LT+ + GG +Q
Sbjct: 194 KL------GAHERRLRCLVLEPTRELALQVEEAFQKYSKYTDLTATVVYGGVGYGKQRED 247
Query: 549 MSGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
+ D+V ATPGR L + ++ L ++ I+V DE
Sbjct: 248 LQ-RGVDVVAATPGRLLDHIEQGTMTLADVEILVLDE 283
>UniRef50_Q7QQ49 Cluster: GLP_139_12217_14094; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_139_12217_14094 - Giardia lamblia
ATCC 50803
Length = 625
Score = 115 bits (277), Expect = 9e-25
Identities = 63/158 (39%), Positives = 95/158 (60%), Gaps = 1/158 (0%)
Frame = +3
Query: 189 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILE 368
++Q + LS + + + + G+K PT +Q K IPI L G+D + A TGSGKT F +P+LE
Sbjct: 2 SWQGLSLSRQLTRAVLRLGWKFPTTVQEKVIPIVLAGRDALVSAVTGSGKTGAFGIPLLE 61
Query: 369 KLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNV 548
++++ + T G ALILSPTRELA QT ++EL FT ++GG +Q
Sbjct: 62 RMIL-RGRDTYGTT--ALILSPTRELAAQTAAVLQELAYFTNFRVYLLIGGTDTAKQAAQ 118
Query: 549 MSGSSPDIVVATPGRFLHICIE-MSLKLDNIXIVVFDE 659
+ + PDI+VATPGR + + ++ LD I ++V DE
Sbjct: 119 LR-TEPDIIVATPGRLIDLVRNTVNFSLDTIEVLVLDE 155
>UniRef50_P39517 Cluster: ATP-dependent RNA helicase DHH1; n=103;
Eukaryota|Rep: ATP-dependent RNA helicase DHH1 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 506
Score = 115 bits (277), Expect = 9e-25
Identities = 62/156 (39%), Positives = 94/156 (60%)
Frame = +3
Query: 192 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 371
F+ L +L GI + G+++P+PIQ + IP+A+TG+D++A A+ G+GKTA FV+P LEK
Sbjct: 48 FEDFYLKRELLMGIFEAGFEKPSPIQEEAIPVAITGRDILARAKNGTGKTAAFVIPTLEK 107
Query: 372 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 551
+ KP K ++ALI+ PTRELALQT + VR LGK G++ GG ++ +
Sbjct: 108 V-----KPKLNK-IQALIMVPTRELALQTSQVVRTLGKHCGISCMVTTGGTNLRDDI-LR 160
Query: 552 SGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
+ I+V TPGR L + L + + + DE
Sbjct: 161 LNETVHILVGTPGRVLDLASRKVADLSDCSLFIMDE 196
>UniRef50_Q7VFA9 Cluster: ATP-dependent RNA helicase DeaD; n=6;
Helicobacteraceae|Rep: ATP-dependent RNA helicase DeaD -
Helicobacter hepaticus
Length = 530
Score = 115 bits (276), Expect = 1e-24
Identities = 64/156 (41%), Positives = 97/156 (62%)
Frame = +3
Query: 192 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 371
F GL VLKGI + G+ P+P+Q ++IPI L GKD++A A+TG+GKTA F +PIL
Sbjct: 47 FDVFGLKDFVLKGIREAGFSTPSPVQSQSIPIILQGKDLIAQAQTGTGKTAAFAIPILNT 106
Query: 372 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 551
L N+ K++ ALI++PTRELA+Q + +LG+F + + + GG+SI++Q +++
Sbjct: 107 L----NR---NKDIEALIITPTRELAMQISEEILKLGRFGRIKTICMYGGQSIKRQCDLL 159
Query: 552 SGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
P ++ATPGR L + + IVV DE
Sbjct: 160 E-KKPKAMIATPGRLLDHLQNGRIAHFSPQIVVLDE 194
>UniRef50_A1FEC3 Cluster: DEAD/DEAH box helicase-like; n=21;
Gammaproteobacteria|Rep: DEAD/DEAH box helicase-like -
Pseudomonas putida W619
Length = 621
Score = 115 bits (276), Expect = 1e-24
Identities = 61/159 (38%), Positives = 94/159 (59%)
Frame = +3
Query: 183 SGAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPI 362
+ F L +LK + + + +PTP+Q IP+AL G+D+ A+TGSGKTA FVLP+
Sbjct: 181 TSVFSQFALHERLLKAVAELKFVEPTPVQAAAIPLALQGRDLRVTAQTGSGKTAAFVLPL 240
Query: 363 LEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQF 542
L +L+ + +RALIL PTRELA QTL+ V+ +FT + + + GGE ++Q
Sbjct: 241 LNRLV---DLKGARVEIRALILLPTRELAQQTLKQVQLFSQFTYIKAGLVTGGEDFKEQ- 296
Query: 543 NVMSGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
M PD+++ TPGR L +L L ++ +++ DE
Sbjct: 297 AAMLRKVPDVLIGTPGRLLEQLNAGNLDLSHVQVMILDE 335
>UniRef50_Q7A4G0 Cluster: Probable DEAD-box ATP-dependent RNA
helicase SA1885; n=13; Staphylococcus|Rep: Probable
DEAD-box ATP-dependent RNA helicase SA1885 -
Staphylococcus aureus (strain N315)
Length = 506
Score = 115 bits (276), Expect = 1e-24
Identities = 60/157 (38%), Positives = 94/157 (59%), Gaps = 1/157 (0%)
Frame = +3
Query: 192 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 371
F+ +G+S ++ + G+K+PTPIQ+ +IP AL G D++ A+TG+GKT F +P++EK
Sbjct: 4 FKELGISDNTVQSLESMGFKEPTPIQKDSIPYALQGIDILGQAQTGTGKTGAFGIPLIEK 63
Query: 372 LLVPNNKPTPGK-NLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNV 548
++ GK +++LIL+PTRELA+Q +RE + G+ + GG IE+Q
Sbjct: 64 VV--------GKQGVQSLILAPTRELAMQVAEQLREFSRGQGVQVVTVFGGMPIERQIKA 115
Query: 549 MSGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
+ P IVV TPGR + +LK D I ++ DE
Sbjct: 116 LK-KGPQIVVGTPGRVIDHLNRRTLKTDGIHTLILDE 151
>UniRef50_Q7R3I2 Cluster: GLP_158_41121_38797; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_158_41121_38797 - Giardia lamblia
ATCC 50803
Length = 774
Score = 114 bits (275), Expect = 2e-24
Identities = 66/162 (40%), Positives = 103/162 (63%), Gaps = 6/162 (3%)
Frame = +3
Query: 192 FQSMG-LSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILE 368
F+ +G LS PVLK I GY T IQ+ IP+ + G D +++TGSGKTA + +P++
Sbjct: 35 FEKLGKLSPPVLKAIHSLGYSTLTSIQKAAIPVIIDGGDACVVSKTGSGKTAAYSIPLVN 94
Query: 369 KLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTG--LTSAAILGGESIEQQF 542
L+ ++ T G +R L+++PTREL +Q +R+L +FT L ++GGE++E+QF
Sbjct: 95 --LLGCHRATTG--IRGLVIAPTRELCVQIGGVIRKLSRFTDPELRVCLLVGGEALEKQF 150
Query: 543 NVMSGSSPDIVVATPGRFLHICIEMSL---KLDNIXIVVFDE 659
++ ++PDI+V TPGR LHI ++S +L +I V FDE
Sbjct: 151 TALT-ANPDIIVCTPGRILHIHDQVSTFKSQLKSIEYVCFDE 191
>UniRef50_Q5KIK3 Cluster: ATP-dependent RNA helicase DRS1; n=1;
Filobasidiella neoformans|Rep: ATP-dependent RNA
helicase DRS1 - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 808
Score = 114 bits (275), Expect = 2e-24
Identities = 65/160 (40%), Positives = 98/160 (61%), Gaps = 3/160 (1%)
Frame = +3
Query: 189 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILE 368
+F +M LS P+L+ +T + PTPIQ + IP+AL G+D++ A TGSGKTA F++PILE
Sbjct: 223 SFTAMNLSRPLLRALTSLQFTAPTPIQARAIPLALLGRDILGSAVTGSGKTAAFMVPILE 282
Query: 369 KLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGL--TSAAILGGESIEQQF 542
+L ++ G R L+L PTRELA+Q + L + GL A ++GG S+ Q
Sbjct: 283 RLCY-RDRGKGGAACRVLVLCPTRELAVQCEAVGKALAEKGGLDVRFALLVGGLSLNAQA 341
Query: 543 NVMSGSSPDIVVATPGRFL-HICIEMSLKLDNIXIVVFDE 659
+ + + PDI++ATPGR + H+ S L + ++V DE
Sbjct: 342 HTLR-TLPDILIATPGRLIDHLTNTPSFTLSALDVLVIDE 380
>UniRef50_Q8XKJ8 Cluster: ATP-dependent RNA helicase; n=12;
Clostridium|Rep: ATP-dependent RNA helicase -
Clostridium perfringens
Length = 528
Score = 114 bits (274), Expect = 2e-24
Identities = 63/156 (40%), Positives = 92/156 (58%)
Frame = +3
Query: 192 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 371
F +GL +LK I G+++P+ IQ ++IP+AL G D++ A+TG+GKTA F I+
Sbjct: 6 FDDLGLKESLLKAIKDMGFEEPSQIQAESIPVALEGHDIIGQAQTGTGKTAAFGCAIINN 65
Query: 372 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 551
K +P +ALIL+PTRELA+Q + LGK L+ I GG+ I++Q +
Sbjct: 66 ADFSGKKKSP----KALILAPTRELAIQVNEELVRLGKHEKLSVLPIYGGQPIDRQIRAL 121
Query: 552 SGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
+ DIVV TPGR L + SL L++I +V DE
Sbjct: 122 K-NGVDIVVGTPGRVLDLIRRKSLPLNDIGFLVLDE 156
>UniRef50_Q11WD3 Cluster: Possible ATP-dependent RNA helicase; n=4;
Sphingobacteriales|Rep: Possible ATP-dependent RNA
helicase - Cytophaga hutchinsonii (strain ATCC 33406 /
NCIMB 9469)
Length = 463
Score = 114 bits (274), Expect = 2e-24
Identities = 63/156 (40%), Positives = 91/156 (58%)
Frame = +3
Query: 192 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 371
F+ + L+ +L I + GY +PT IQ K IP L G D++ +A+TG+GKTA + LPIL K
Sbjct: 7 FEELKLNRQLLNAIEEAGYTEPTEIQSKAIPQILAGHDIIGVAQTGTGKTAAYALPILMK 66
Query: 372 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 551
+ K G N RA+I PTREL +Q +++L K+T L A+ GG + Q +
Sbjct: 67 I-----KYAQGHNPRAVIFGPTRELVMQIEIAMKQLAKYTDLRIVALYGGIGPKLQKEHL 121
Query: 552 SGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
DI+VATPGRFL + +E + L + +V DE
Sbjct: 122 Q-KGVDIIVATPGRFLDLYLEEEIVLKEVKTMVLDE 156
>UniRef50_A7HDE9 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Anaeromyxobacter sp. Fw109-5|Rep: DEAD/DEAH box
helicase domain protein - Anaeromyxobacter sp. Fw109-5
Length = 680
Score = 114 bits (274), Expect = 2e-24
Identities = 60/160 (37%), Positives = 90/160 (56%)
Frame = +3
Query: 180 SSGAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLP 359
S +F +GLS PV + I + GY++PTP+Q T GKDV+ ++TG+GKTA F +P
Sbjct: 18 SQASFDELGLSEPVRRAIAEHGYERPTPVQVSTFRPVRDGKDVIVRSKTGTGKTAAFAIP 77
Query: 360 ILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQ 539
ILE++ +P+ AL++ PTRELA+Q + L K L+ A+ GG S+ +Q
Sbjct: 78 ILERIADGRRRPS------ALVMCPTRELAIQVAQEFTALAKHRDLSVVAVYGGASMGEQ 131
Query: 540 FNVMSGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
+ + +I+V TPGR +LKLD + DE
Sbjct: 132 LQKLEAGA-EIIVGTPGRIYDHIRRRTLKLDETMVCCLDE 170
>UniRef50_UPI00004987FF Cluster: DEAD/DEAH box helicase; n=5;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 432
Score = 113 bits (273), Expect = 3e-24
Identities = 63/160 (39%), Positives = 97/160 (60%), Gaps = 4/160 (2%)
Frame = +3
Query: 192 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 371
F+ +GL VLK + GYK+PT IQ +IP+AL KD++ +A+TGSGKTA F+LP+++
Sbjct: 11 FKDLGLIPEVLKVVEYLGYKKPTRIQENSIPVALQKKDIIGIAQTGSGKTASFLLPMVQH 70
Query: 372 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGK-FTGLTSAAILGGESIEQQFNV 548
LL N + +I+ PTRELA Q + + E+GK GLTS ++GG + +Q +V
Sbjct: 71 LL---NVKEKNRGFYCIIIEPTRELAAQVVEVIDEMGKALPGLTSCLLVGGMDVMKQ-SV 126
Query: 549 MSGSSPDIVVATPGRFL-HICIEMSLK--LDNIXIVVFDE 659
P ++V TPGR + HI ++ ++ + +V DE
Sbjct: 127 QLAKRPQVIVGTPGRIVYHIKNTKGVEESIEKVKFLVIDE 166
>UniRef50_A5EYB1 Cluster: ATP-dependent rna helicase Rhl; n=2;
Gammaproteobacteria|Rep: ATP-dependent rna helicase Rhl
- Dichelobacter nodosus (strain VCS1703A)
Length = 432
Score = 113 bits (273), Expect = 3e-24
Identities = 58/156 (37%), Positives = 92/156 (58%)
Frame = +3
Query: 192 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 371
F + +L+ + + + TPIQ +T+P+ L G DV+ +A+TG+GKTA F+L ++
Sbjct: 11 FTDFPIHSALLEALEDIHFTKTTPIQAQTLPLTLAGYDVMGIAQTGTGKTAAFLLSLMHY 70
Query: 372 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 551
L+ P K A++L+PTRELA+Q + + LG +TGL S AI GG SIE Q +
Sbjct: 71 LMTNPVHPK-AKGPWAIVLAPTRELAIQIKKEMDLLGAYTGLVSLAIYGGTSIEHQKKLF 129
Query: 552 SGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
+ D+++ TPGR + + + +L NI + V DE
Sbjct: 130 QACNVDVIIGTPGRIIDLFKQKVFRLKNIEVCVLDE 165
>UniRef50_A2DB16 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 449
Score = 113 bits (273), Expect = 3e-24
Identities = 60/158 (37%), Positives = 95/158 (60%), Gaps = 1/158 (0%)
Frame = +3
Query: 189 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILE 368
+F + L+ P+++ + + + PT +Q +TIP L+G+D+ A A TGSGK+ F++PI++
Sbjct: 8 SFLDLKLAKPIIRALNENNFTNPTKVQAETIPKILSGQDICATAITGSGKSMAFLIPIVQ 67
Query: 369 KLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNV 548
KLL P P +ALI+SPTRELA Q L +TS ++GG S E+Q +
Sbjct: 68 KLLTFRGLPGP----KALIMSPTRELAQQLKAVCDMLAAHCAITSTLVIGGVSDEEQREL 123
Query: 549 MSGSSPDIVVATPGRFLHICIEMS-LKLDNIXIVVFDE 659
++ +PDI++ TPGRF+ LKL+++ V DE
Sbjct: 124 LT-PAPDIIIGTPGRFIDSIFNAKVLKLEHLQFFVLDE 160
>UniRef50_Q1N6E2 Cluster: ATP-dependent RNA helicase; n=1;
Oceanobacter sp. RED65|Rep: ATP-dependent RNA helicase -
Oceanobacter sp. RED65
Length = 475
Score = 113 bits (272), Expect = 4e-24
Identities = 56/156 (35%), Positives = 87/156 (55%)
Frame = +3
Query: 192 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 371
F L +++ I G+ +PIQ + +P L G+D++ A+TG+GKTA F++ +L+K
Sbjct: 100 FHDFNLDARIMRSIQDLGFSYASPIQAEALPYTLAGRDIIGKAQTGTGKTAAFLITVLQK 159
Query: 372 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 551
LL + RALIL+PTRELA+Q + L K+ L +LGG ++Q +
Sbjct: 160 LLTVKPEERFASEPRALILAPTRELAMQIAKDADGLSKYADLNIVTVLGGVDYDKQKEQL 219
Query: 552 SGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
D+VVATPGR L + + LD + ++V DE
Sbjct: 220 ENEVVDVVVATPGRLLDYLQQGIVYLDQVEMLVIDE 255
>UniRef50_Q1I3W1 Cluster: ATP-dependent RNA helicase RhlE, DEAD box
family; n=21; Pseudomonadaceae|Rep: ATP-dependent RNA
helicase RhlE, DEAD box family - Pseudomonas entomophila
(strain L48)
Length = 634
Score = 113 bits (272), Expect = 4e-24
Identities = 63/161 (39%), Positives = 92/161 (57%), Gaps = 4/161 (2%)
Frame = +3
Query: 189 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILE 368
+F S+GLS +++ I GY QPTP+Q++ IP L G+D++ A+TG+GKT F LPILE
Sbjct: 2 SFASLGLSEALVRAIEAAGYTQPTPVQQRAIPAVLQGRDLMVAAQTGTGKTGGFALPILE 61
Query: 369 KLLV---PNNKPTPG-KNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQ 536
+L P+ G + R L+L+PTRELA Q + + SA I GG +
Sbjct: 62 RLFPGGHPDKSQRHGPRQPRVLVLTPTRELAAQVHDSFKVYARDLNFISACIFGGVGMNP 121
Query: 537 QFNVMSGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
Q M+ D++VA PGR L + + S+ L + I+V DE
Sbjct: 122 QVQAMA-KGVDVLVACPGRLLDLAGQGSVDLSRVEILVLDE 161
>UniRef50_Q15T34 Cluster: DEAD/DEAH box helicase-like; n=1;
Pseudoalteromonas atlantica T6c|Rep: DEAD/DEAH box
helicase-like - Pseudoalteromonas atlantica (strain T6c
/ BAA-1087)
Length = 458
Score = 113 bits (272), Expect = 4e-24
Identities = 60/157 (38%), Positives = 94/157 (59%)
Frame = +3
Query: 189 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILE 368
+F+++GL ++ I +GY T IQR+ IP+ L D++A+A+TG+GKTA F LP+L+
Sbjct: 2 SFEALGLRDELIHAIATQGYSVATDIQREAIPLVLAQHDLLAVAQTGTGKTAAFTLPLLQ 61
Query: 369 KLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNV 548
+L + G +R+LI++PTRELA Q V + S A+ GG IE Q
Sbjct: 62 RLAAKQSTKVQG--VRSLIVTPTRELAAQVAISVEIYSTQLNIRSFAVYGGVRIEPQIAQ 119
Query: 549 MSGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
+ D+++ATPGR L + + +L +N+ I+VFDE
Sbjct: 120 LQ-EGVDVLIATPGRLLDLYEQRALHFENLEILVFDE 155
>UniRef50_A6CFZ8 Cluster: ATP-dependent RNA helicase; n=1;
Planctomyces maris DSM 8797|Rep: ATP-dependent RNA
helicase - Planctomyces maris DSM 8797
Length = 445
Score = 113 bits (272), Expect = 4e-24
Identities = 66/156 (42%), Positives = 89/156 (57%)
Frame = +3
Query: 192 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 371
FQ + L PV K + + YK PTPIQ +TIP AL G+DV+ A+TG+GKTA LPIL +
Sbjct: 4 FQELKLIAPVQKALVEENYKIPTPIQAQTIPAALEGRDVLGCAQTGTGKTAALALPILNQ 63
Query: 372 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 551
L + K P L AL+L+PTRELA+Q G+ L S I GG Q +
Sbjct: 64 LGKNSRKSIPHHPL-ALVLAPTRELAIQIGDSFDAYGRHLKLRSVLIYGGVGQGNQVKAL 122
Query: 552 SGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
+ I+VATPGR L + + +KL+ + + V DE
Sbjct: 123 KRGA-HILVATPGRLLDLMNQGHIKLNQLEVFVLDE 157
>UniRef50_A5UZK3 Cluster: DEAD/DEAH box helicase domain protein;
n=12; Bacteria|Rep: DEAD/DEAH box helicase domain
protein - Roseiflexus sp. RS-1
Length = 467
Score = 113 bits (272), Expect = 4e-24
Identities = 63/157 (40%), Positives = 91/157 (57%)
Frame = +3
Query: 189 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILE 368
+F S + GI GY PTPIQ + IP AL G+DV+ +A+TG+GKTA FVLPIL+
Sbjct: 2 SFDSFRFHPQITAGIRDLGYHTPTPIQEQVIPHALDGRDVIGIAQTGTGKTAAFVLPILQ 61
Query: 369 KLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNV 548
+L+ P +RA+I++PTRELA Q + LGK+TGL S + GG + Q
Sbjct: 62 RLM-----RGPRGRVRAMIVTPTRELAEQIQGVIEALGKYTGLRSVTLYGGVGYQGQIQR 116
Query: 549 MSGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
+ +I V PGR L +L L+++ +++ DE
Sbjct: 117 LR-RGVEIAVVCPGRLLDHLERGTLTLEHLDMLILDE 152
>UniRef50_Q4P5U4 Cluster: ATP-dependent RNA helicase DBP4; n=1;
Ustilago maydis|Rep: ATP-dependent RNA helicase DBP4 -
Ustilago maydis (Smut fungus)
Length = 869
Score = 113 bits (272), Expect = 4e-24
Identities = 58/157 (36%), Positives = 97/157 (61%), Gaps = 1/157 (0%)
Frame = +3
Query: 192 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 371
F + LS +G+ + GY T IQ K++ ++L GKDV+ ARTGSGKT F++P+LE
Sbjct: 60 FTQLPLSDRTCRGLKRAGYTDMTDIQAKSLSLSLKGKDVLGAARTGSGKTLAFLIPVLE- 118
Query: 372 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 551
++ K P L AL++SPTRELA+Q +R++G + ++ ++GG+ ++Q+ + +
Sbjct: 119 -ILYRRKWGPSDGLGALVISPTRELAIQIFEVLRKIGSYHTFSAGLVIGGKDVKQEKDRL 177
Query: 552 SGSSPDIVVATPGRFL-HICIEMSLKLDNIXIVVFDE 659
S +I++ATPGR L H+ + N+ ++V DE
Sbjct: 178 --SRINILIATPGRLLQHMDQTLGFDTSNVQVLVLDE 212
>UniRef50_Q30P62 Cluster: DEAD/DEAH box helicase-like; n=1;
Thiomicrospira denitrificans ATCC 33889|Rep: DEAD/DEAH
box helicase-like - Thiomicrospira denitrificans (strain
ATCC 33889 / DSM 1351)
Length = 411
Score = 113 bits (271), Expect = 5e-24
Identities = 63/159 (39%), Positives = 92/159 (57%), Gaps = 3/159 (1%)
Frame = +3
Query: 192 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 371
F +GLS +L+ + + G+ +PTPIQ + IP+ L D++A A+TGSGK+A F+LPILE
Sbjct: 3 FSKLGLSQNILQALKQNGFTKPTPIQERVIPLVLERHDIMAKAQTGSGKSASFILPILE- 61
Query: 372 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTS--AAILGGESI-EQQF 542
L+ + ++ L+L+PTREL Q + G F ++GGE I EQ F
Sbjct: 62 -LLSRDSYEGKAKIKVLVLTPTRELTQQIVEAFNTFGAFMSKKPKVVGVIGGEGIGEQLF 120
Query: 543 NVMSGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
N+ G DI+VAT GRFL I + + L ++ V DE
Sbjct: 121 NIQKGC--DILVATSGRFLDILSKKQMILSHVDFFVLDE 157
>UniRef50_Q869K2 Cluster: Similar to Dictyostelium discoideum (Slime
mold). Putative RNA helicase; n=3; Dictyostelium
discoideum|Rep: Similar to Dictyostelium discoideum
(Slime mold). Putative RNA helicase - Dictyostelium
discoideum (Slime mold)
Length = 1151
Score = 113 bits (271), Expect = 5e-24
Identities = 62/150 (41%), Positives = 90/150 (60%)
Frame = +3
Query: 204 GLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEKLLVP 383
GL+ V + K Y++PT IQ +TIP + G+D++ +ARTGSGKT F+LP+ +L
Sbjct: 515 GLTEKVHLLLKKFQYEKPTSIQAQTIPAIMNGRDLIGIARTGSGKTLAFLLPMFRHILA- 573
Query: 384 NNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVMSGSS 563
K PG+ + ALI+SPTRELALQ ++ K GL +A + GG SI +Q + +
Sbjct: 574 QPKSAPGEGMIALIMSPTRELALQIHVECKKFSKVLGLRTACVYGGASISEQIAELKRGA 633
Query: 564 PDIVVATPGRFLHICIEMSLKLDNIXIVVF 653
DIVV TPGR + I + ++ N+ V F
Sbjct: 634 -DIVVCTPGRMIDILCANNRRITNLRRVTF 662
>UniRef50_Q0W8H7 Cluster: ATP-dependent RNA helicase; n=1;
uncultured methanogenic archaeon RC-I|Rep: ATP-dependent
RNA helicase - Uncultured methanogenic archaeon RC-I
Length = 497
Score = 113 bits (271), Expect = 5e-24
Identities = 58/156 (37%), Positives = 92/156 (58%)
Frame = +3
Query: 192 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 371
F + L+ +++ + + G+++ TPIQ + IP+A+ GKD++ ARTG+GKTA F +P++E
Sbjct: 4 FTELNLTPSIVRAVHEMGFEEATPIQEQAIPLAMEGKDLIGQARTGTGKTAAFGIPMVEA 63
Query: 372 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 551
+ +PT K ++ L++ PTRELA+Q + +GK G+ S AI GG+ Q +
Sbjct: 64 I-----RPT-SKGVQGLVVVPTRELAVQVAEELTRIGKVRGIRSVAIYGGQDFRSQVKAL 117
Query: 552 SGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
P IVV TPGR L ++ +I I V DE
Sbjct: 118 E-ELPHIVVGTPGRLLEHMRREYVRTSDIRIAVLDE 152
>UniRef50_Q11TW3 Cluster: Possible ATP-dependent RNA helicase; n=5;
Bacteria|Rep: Possible ATP-dependent RNA helicase -
Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)
Length = 388
Score = 112 bits (270), Expect = 6e-24
Identities = 67/161 (41%), Positives = 97/161 (60%), Gaps = 4/161 (2%)
Frame = +3
Query: 189 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILE 368
+F ++GLS +LK + K+ Y P PIQ + IP L GKD++ +A+TGSGKTA FVLPIL+
Sbjct: 10 SFATLGLSPAILKALEKQFYNAPYPIQEQAIPAILKGKDILGIAQTGSGKTASFVLPILQ 69
Query: 369 KLLVPNNKPTPGKN--LRALILSPTRELALQTLRFVRELGKF--TGLTSAAILGGESIEQ 536
L KP GKN + AL+L PTRELA+Q + + + S A+ GG SI
Sbjct: 70 ML---QTKPL-GKNRHINALVLVPTRELAVQVGQVFQAFSNALPNKIKSLAVYGGVSINP 125
Query: 537 QFNVMSGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
Q + G +I++ATPGR L + ++ L ++ ++V DE
Sbjct: 126 QMIQLQG--VEILIATPGRLLDLVDSKAVYLSDVEVLVLDE 164
>UniRef50_A5FST0 Cluster: DEAD/DEAH box helicase domain protein;
n=8; Bacteria|Rep: DEAD/DEAH box helicase domain protein
- Dehalococcoides sp. BAV1
Length = 561
Score = 112 bits (270), Expect = 6e-24
Identities = 59/157 (37%), Positives = 92/157 (58%)
Frame = +3
Query: 189 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILE 368
+F+S V+ G+ GYK+PTPIQ + IP + G DV+ +A+TG+GKTA + LPI++
Sbjct: 2 SFESFNFDPAVMAGVRACGYKEPTPIQAQAIPPIMAGHDVIGLAQTGTGKTAAYALPIIQ 61
Query: 369 KLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNV 548
K+L TP +R L+++PTRELA Q R LG+ + +I GG +++QQ
Sbjct: 62 KML-----STPRGRVRTLVIAPTRELACQISDSFRSLGQRARIRECSIYGGVNMDQQIRR 116
Query: 549 MSGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
+ S D+VVA PGR L ++ + + ++ DE
Sbjct: 117 LR-SGVDVVVACPGRLLDHIWRGTIDVCGVETLIIDE 152
>UniRef50_P20448 Cluster: ATP-dependent RNA helicase DBP4; n=13;
Saccharomycetales|Rep: ATP-dependent RNA helicase DBP4 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 770
Score = 112 bits (270), Expect = 6e-24
Identities = 60/157 (38%), Positives = 97/157 (61%), Gaps = 1/157 (0%)
Frame = +3
Query: 192 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 371
F+ + +S P LKG+ + + + T IQ +IP++L G DV+A A+TGSGKT F++P++EK
Sbjct: 43 FKDLPISDPTLKGLRESSFIKLTEIQADSIPVSLQGHDVLAAAKTGSGKTLAFLVPVIEK 102
Query: 372 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 551
L K T L ALI+SPTRELA+Q + ++G T ++ ++GG+ + +F +
Sbjct: 103 LY--REKWTEFDGLGALIISPTRELAMQIYEVLTKIGSHTSFSAGLVIGGKDV--KFELE 158
Query: 552 SGSSPDIVVATPGRFL-HICIEMSLKLDNIXIVVFDE 659
S +I++ TPGR L H+ + L N+ ++V DE
Sbjct: 159 RISRINILIGTPGRILQHLDQAVGLNTSNLQMLVLDE 195
>UniRef50_Q12QV2 Cluster: DEAD/DEAH box helicase-like protein; n=16;
Gammaproteobacteria|Rep: DEAD/DEAH box helicase-like
protein - Shewanella denitrificans (strain OS217 / ATCC
BAA-1090 / DSM 15013)
Length = 433
Score = 112 bits (269), Expect = 8e-24
Identities = 62/158 (39%), Positives = 90/158 (56%), Gaps = 2/158 (1%)
Frame = +3
Query: 192 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 371
F+S + +L+ I + GY+ TP+Q++ IP G+DV+A A+TG+GKTA F LPIL+K
Sbjct: 3 FESFSFAPEILRAIAECGYQNMTPVQQQAIPAIRRGEDVLASAQTGTGKTAAFALPILQK 62
Query: 372 LLVPNNKP--TPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFN 545
+ + +P N RALIL+PTRELA Q + K ++ I GG + Q
Sbjct: 63 M---HERPMTVQHSNARALILTPTRELAAQVADNISAYSKHMNISVLTIYGGMKMATQAQ 119
Query: 546 VMSGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
+ DI+VATPGR L + +L L N+ +V DE
Sbjct: 120 KLK-QGADIIVATPGRLLEHIVACNLSLSNVEFLVLDE 156
>UniRef50_Q30YG9 Cluster: DEAD/DEAH box helicase-like; n=3;
Deltaproteobacteria|Rep: DEAD/DEAH box helicase-like -
Desulfovibrio desulfuricans (strain G20)
Length = 530
Score = 111 bits (268), Expect = 1e-23
Identities = 61/157 (38%), Positives = 91/157 (57%)
Frame = +3
Query: 189 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILE 368
+F L +++ ++ RG+ PTPIQ K +P AL G+D++ +A TG+GKTA FVLP+L
Sbjct: 57 SFARFSLHPALIEAVSARGFVNPTPIQEKALPPALAGQDILGLAATGTGKTAAFVLPLLH 116
Query: 369 KLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNV 548
+LL+ + LRAL+++PTREL Q V+ L +F L SA + GG + Q V
Sbjct: 117 RLLLQGE--SARGTLRALVVAPTRELVAQIHEEVKTLARFCRLRSATVYGGVGMHAQ-TV 173
Query: 549 MSGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
+ DIV+A PGR L L ++ ++V DE
Sbjct: 174 QLRTGVDIVLACPGRLLDHVRRGHADLSHVDMLVLDE 210
>UniRef50_A7HKQ8 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Fervidobacterium nodosum Rt17-B1|Rep: DEAD/DEAH box
helicase domain protein - Fervidobacterium nodosum
Rt17-B1
Length = 571
Score = 111 bits (268), Expect = 1e-23
Identities = 63/157 (40%), Positives = 96/157 (61%), Gaps = 1/157 (0%)
Frame = +3
Query: 192 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIAL-TGKDVVAMARTGSGKTACFVLPILE 368
F+ GLS +L I K+GY++PT IQ+ +P AL T KD++A A+TG+GKTA F +P+LE
Sbjct: 20 FEDFGLSEEILLAIQKKGYEKPTEIQKIVLPYALSTDKDLIAQAQTGTGKTAAFGIPLLE 79
Query: 369 KLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNV 548
++ N K ++A+I++PTRELALQ ++ L + + GG+S+E+QF
Sbjct: 80 RIDFKAN-----KFVKAIIVTPTRELALQIFEELKSLKGTKRVKITTLYGGQSLEKQFKD 134
Query: 549 MSGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
+ DIVV TPGR + +L L ++ +V DE
Sbjct: 135 LE-KGVDIVVGTPGRIIDHLNRDTLDLSHVEYLVLDE 170
>UniRef50_A7HG33 Cluster: DEAD/DEAH box helicase domain protein;
n=5; Cystobacterineae|Rep: DEAD/DEAH box helicase domain
protein - Anaeromyxobacter sp. Fw109-5
Length = 455
Score = 111 bits (268), Expect = 1e-23
Identities = 64/160 (40%), Positives = 93/160 (58%)
Frame = +3
Query: 180 SSGAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLP 359
S+ +F + LS L + + G++ PTPIQ + IP AL GKDV+ A TG+GKTA F+LP
Sbjct: 2 STTSFAELHLSPEALAALRRAGFEHPTPIQAQAIPPALAGKDVIGTAATGTGKTAAFLLP 61
Query: 360 ILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQ 539
++++L KP RAL+L+PTRELALQ + G + A I+GG + QQ
Sbjct: 62 LIDRLA---GKP----GTRALVLAPTRELALQIGEELERFGHARRVRGAVIIGGVGMAQQ 114
Query: 540 FNVMSGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
+ +IV+ATPGR + + + +LD I +V DE
Sbjct: 115 AEALR-QKREIVIATPGRLVDHLEQGNARLDGIEALVLDE 153
>UniRef50_A6NSW7 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 400
Score = 111 bits (268), Expect = 1e-23
Identities = 64/157 (40%), Positives = 92/157 (58%), Gaps = 1/157 (0%)
Frame = +3
Query: 192 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 371
+ +GLS V+K I K+GY + TP+Q IP + KDV+A A TG+GKT F +P++E
Sbjct: 14 YADLGLSAEVMKAIDKKGYVRATPVQAGAIPYFMEWKDVIAKAPTGTGKTFAFGIPMVEH 73
Query: 372 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKF-TGLTSAAILGGESIEQQFNV 548
+ ++AL+L+PTRELALQ +R+L +F G+ S + GG IE+Q
Sbjct: 74 I------DPESDAVQALVLAPTRELALQIQDELRDLCEFKEGVRSVCLYGGAPIEKQITT 127
Query: 549 MSGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
+ P IVVATPGR + ++KLD + VV DE
Sbjct: 128 LK-KHPQIVVATPGRLMDHMKRRTVKLDKVETVVLDE 163
>UniRef50_A0VLH7 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Rhodobacteraceae|Rep: DEAD/DEAH box helicase domain
protein - Dinoroseobacter shibae DFL 12
Length = 508
Score = 111 bits (268), Expect = 1e-23
Identities = 60/156 (38%), Positives = 89/156 (57%)
Frame = +3
Query: 192 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 371
F +GLS ++ G+ + PTPIQ + IP L G+DV+ +A+TG+GKTA F LP+L+
Sbjct: 73 FDMLGLSPRLVAGLAAQNITDPTPIQTRAIPHGLNGRDVLGIAQTGTGKTAAFGLPLLDA 132
Query: 372 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 551
L+ KP P + R LIL+PTREL Q +R + + L I+GG +I Q
Sbjct: 133 LMKAGTKPAP-RTCRGLILAPTRELVSQICESLRAFTEGSHLKLQVIVGGVAIGPQIK-R 190
Query: 552 SGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
+ D++VATPGR + + +L+L +V DE
Sbjct: 191 AERGADLIVATPGRLIDLLDRKALRLSETRFLVLDE 226
>UniRef50_Q5CX71 Cluster: Hca4p helicase DBP4 (Helicase CA4).
EIF4A-1-family RNA SFII helicase; n=3;
Cryptosporidium|Rep: Hca4p helicase DBP4 (Helicase CA4).
EIF4A-1-family RNA SFII helicase - Cryptosporidium
parvum Iowa II
Length = 770
Score = 111 bits (268), Expect = 1e-23
Identities = 66/162 (40%), Positives = 99/162 (61%), Gaps = 2/162 (1%)
Frame = +3
Query: 180 SSGAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLP 359
S F + +S L+G+ GY Q T IQR T+P +L G+D++ ARTGSGKT +V+P
Sbjct: 69 SPDLFSDLPISRRTLEGLRAEGYYQMTLIQRDTLPHSLQGRDIIGQARTGSGKTLAYVIP 128
Query: 360 ILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKF-TGLTSAAILGGESIEQ 536
ILE + N G L +LIL+PTRELA Q ++E+GKF + L++ I+GG+ I+
Sbjct: 129 ILENIYRDNYCSIDG--LLSLILTPTRELASQVFDVIKEIGKFHSTLSAGCIVGGKDIKS 186
Query: 537 QFNVMSGSSPDIVVATPGRFLHICIEMSL-KLDNIXIVVFDE 659
+ + + + +I+VATPGR + E L +N+ I+V DE
Sbjct: 187 ESSRI--NMLNILVATPGRLIQHMDESPLWDANNLKILVIDE 226
>UniRef50_Q4N4B1 Cluster: ATP-dependent RNA helicase, putative; n=4;
Eukaryota|Rep: ATP-dependent RNA helicase, putative -
Theileria parva
Length = 470
Score = 111 bits (268), Expect = 1e-23
Identities = 66/157 (42%), Positives = 93/157 (59%), Gaps = 1/157 (0%)
Frame = +3
Query: 192 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 371
F+ +G+ + + + G+K+PT IQ + IPIAL+GKD++ +A TGSGKTA F +PIL+K
Sbjct: 43 FEDLGVCVELCRACKELGWKRPTKIQIEAIPIALSGKDIIGLAETGSGKTAAFTIPILQK 102
Query: 372 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 551
LL KP + L +LIL+PTREL+LQ + LG GL ILGG + Q +
Sbjct: 103 LL---EKP---QRLFSLILAPTRELSLQIKEQLISLGSEIGLDVCLILGGLDMVSQALQL 156
Query: 552 SGSSPDIVVATPGRFL-HICIEMSLKLDNIXIVVFDE 659
S P I+V +PGR H+ L+ I +V DE
Sbjct: 157 S-KKPHIIVGSPGRIADHLQNTKGFSLETIKYLVLDE 192
>UniRef50_Q16JA8 Cluster: DEAD box ATP-dependent RNA helicase; n=1;
Aedes aegypti|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 727
Score = 111 bits (268), Expect = 1e-23
Identities = 64/160 (40%), Positives = 96/160 (60%), Gaps = 1/160 (0%)
Frame = +3
Query: 183 SGAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPI 362
+ +F LS L G+ + Y +PT IQR++I AL GKD++A A+TGSGKT F++P+
Sbjct: 61 TSSFSDFPLSKKTLGGLKQGQYHKPTAIQRESILPALQGKDILAAAKTGSGKTLAFLIPV 120
Query: 363 LEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQF 542
EKL N+ T L ALI++PTRELALQ V ++GK T+ I+GG++++ +
Sbjct: 121 FEKLY--TNQWTKLDGLGALIITPTRELALQIFETVAKIGKLHDFTTGLIIGGQNLKAEK 178
Query: 543 NVMSGSSPDIVVATPGRFL-HICIEMSLKLDNIXIVVFDE 659
N + +I++ TPGR L H+ N+ I+V DE
Sbjct: 179 NRL--HQLNIIICTPGRLLQHMDQNPLFDCTNLKILVLDE 216
>UniRef50_UPI0000D5571E Cluster: PREDICTED: similar to CG5800-PA;
n=1; Tribolium castaneum|Rep: PREDICTED: similar to
CG5800-PA - Tribolium castaneum
Length = 770
Score = 111 bits (267), Expect = 1e-23
Identities = 64/158 (40%), Positives = 95/158 (60%), Gaps = 1/158 (0%)
Frame = +3
Query: 189 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILE 368
+F + LS LKG+ + GY +PT IQR+TI + LTGKD++ A+TGSGKT F++PILE
Sbjct: 52 SFDDLPLSPKTLKGLKECGYTKPTDIQRETIKLGLTGKDILGAAQTGSGKTLAFLIPILE 111
Query: 369 KLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNV 548
+L G L AL+++PTRELA Q +R +G+ ++ I+GG+ ++ + N
Sbjct: 112 RLYCKQWTRLDG--LGALVITPTRELAYQIFEELRRVGEHHEFSAGLIIGGKDLKFERNR 169
Query: 549 MSGSSPDIVVATPGRFL-HICIEMSLKLDNIXIVVFDE 659
M +IV+ TPGR L H+ N+ I+V DE
Sbjct: 170 M--DQCNIVIGTPGRILQHMDENPLFDCVNMEILVLDE 205
>UniRef50_Q9KAA6 Cluster: ATP-dependent RNA helicase; n=5;
Firmicutes|Rep: ATP-dependent RNA helicase - Bacillus
halodurans
Length = 539
Score = 111 bits (267), Expect = 1e-23
Identities = 57/156 (36%), Positives = 93/156 (59%)
Frame = +3
Query: 192 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 371
F + + + K I + G+++P+PIQ K IP L G DV+ A+TG+GKTA F +P++EK
Sbjct: 8 FNELQIGEEIKKAIIEMGFEEPSPIQAKAIPAILAGGDVIGQAQTGTGKTAAFGIPVVEK 67
Query: 372 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 551
+ + G++++ALIL+PTRELA+Q +++L K + + I GG+SI Q +
Sbjct: 68 V-------STGRHVQALILTPTRELAIQVSGEIQKLSKHKKIRTLPIYGGQSIVHQIKAL 120
Query: 552 SGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
+V+ TPGR + +L LD++ V+ DE
Sbjct: 121 K-QGVQVVIGTPGRIIDHLRRKTLILDHVNTVILDE 155
>UniRef50_A6TTG0 Cluster: DEAD/DEAH box helicase domain protein;
n=3; Clostridiaceae|Rep: DEAD/DEAH box helicase domain
protein - Alkaliphilus metalliredigens QYMF
Length = 549
Score = 111 bits (267), Expect = 1e-23
Identities = 60/156 (38%), Positives = 93/156 (59%)
Frame = +3
Query: 192 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 371
F +G+S + + K +PTP+Q + IP L +DV+A A+TG+GKT F+LPILE+
Sbjct: 5 FAKLGISEEIENVLNKSDITEPTPVQLQAIPPLLAQRDVMAQAQTGTGKTLAFILPILER 64
Query: 372 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 551
+ V KPT ++ALI++PTRELA+Q ++L + G+ A GG+ +EQQ +
Sbjct: 65 VNV--EKPT----IQALIITPTRELAIQITAETKKLAEVKGINILAAYGGQDVEQQLRKL 118
Query: 552 SGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
GS I++ TPGR L ++ L + ++V DE
Sbjct: 119 KGSI-HIIIGTPGRLLDHLRRKTINLGKLSMLVLDE 153
>UniRef50_Q5CWJ4 Cluster: Drs1p, eIF4a-1-family RNA SFII helicase;
n=3; Cryptosporidium|Rep: Drs1p, eIF4a-1-family RNA SFII
helicase - Cryptosporidium parvum Iowa II
Length = 573
Score = 111 bits (267), Expect = 1e-23
Identities = 65/168 (38%), Positives = 107/168 (63%), Gaps = 12/168 (7%)
Frame = +3
Query: 192 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 371
+ S+ LS P+LK ++ + + T IQ++ IP+AL+G+D++A A TGSGKTA F+LP LE+
Sbjct: 32 WSSLELSRPLLKALSDLNFVEATLIQKEVIPLALSGRDIMAEAETGSGKTAAFLLPALER 91
Query: 372 LL----VPNNKPTP-GK-----NLRALILSPTRELALQTLRFVRELGKFTG-LTSAAILG 518
LL V N++ + G+ + L+L P+RELA+Q + L K+ +T A + G
Sbjct: 92 LLRSPYVRNSRVSSLGRVGGAVGTKVLVLLPSRELAMQCFGVLESLTKYCPVITRAVVTG 151
Query: 519 GESIEQQFNVMSGSSPDIVVATPGRFLHICIE-MSLKLDNIXIVVFDE 659
G +I+QQ ++ P IV+ATPGR L + + +S++L+ + I++ DE
Sbjct: 152 GMNIQQQERILK-CQPHIVIATPGRILDMLLNTLSIQLELLEIIILDE 198
>UniRef50_Q8D7D0 Cluster: Superfamily II DNA and RNA helicase; n=20;
Gammaproteobacteria|Rep: Superfamily II DNA and RNA
helicase - Vibrio vulnificus
Length = 418
Score = 111 bits (266), Expect = 2e-23
Identities = 59/159 (37%), Positives = 93/159 (58%)
Frame = +3
Query: 183 SGAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPI 362
+ F +GL + +++ G+ PTPIQ++ IP L G+DV+A A+TG+GKTA + LP+
Sbjct: 2 TNTFIELGLDSSLSDHLSQLGFNTPTPIQQQAIPHLLQGRDVLAAAQTGTGKTAAYGLPL 61
Query: 363 LEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQF 542
++ L + + T K+ RALIL+PTRELA Q +++ + T L + GG SI Q
Sbjct: 62 IQMLSRQSREETAPKHPRALILAPTRELAQQVFDNLKQYAQHTELAIVTVYGGTSIRVQQ 121
Query: 543 NVMSGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
++ DI++ATPGR L L+ + ++V DE
Sbjct: 122 EQLA-KGVDILIATPGRLLDHLFTKKTSLNQLQMLVLDE 159
>UniRef50_Q81QF0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=25; Firmicutes|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Bacillus anthracis
Length = 450
Score = 111 bits (266), Expect = 2e-23
Identities = 63/157 (40%), Positives = 92/157 (58%), Gaps = 1/157 (0%)
Frame = +3
Query: 192 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 371
F +G+S + + G + TPIQ K IP+ L+GKD++ A+TG+GKT FVLPILEK
Sbjct: 7 FLELGISETFNHTLRENGITEATPIQEKAIPVILSGKDIIGQAKTGTGKTLAFVLPILEK 66
Query: 372 LLVPNNKPTPGKNLRALILSPTRELALQ-TLRFVRELGKFTGLTSAAILGGESIEQQFNV 548
+ +++ALI++PTRELALQ T + L + + AI GG+ + QQ
Sbjct: 67 I------DPESSDVQALIVAPTRELALQITTEIKKMLVQREDINVLAIYGGQDVAQQLRK 120
Query: 549 MSGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
+ G++ IVVATPGR L ++ L N+ +V DE
Sbjct: 121 LKGNT-HIVVATPGRLLDHIRRETIDLSNLSTIVLDE 156
>UniRef50_Q30SZ2 Cluster: DEAD/DEAH box helicase-like; n=1;
Thiomicrospira denitrificans ATCC 33889|Rep: DEAD/DEAH
box helicase-like - Thiomicrospira denitrificans (strain
ATCC 33889 / DSM 1351)
Length = 432
Score = 111 bits (266), Expect = 2e-23
Identities = 59/157 (37%), Positives = 95/157 (60%)
Frame = +3
Query: 189 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILE 368
+F+ +G+ P+L I GY++PT IQ + IP+ L DV A A+TG+GKTA F L +L+
Sbjct: 2 SFEKLGVIKPLLSAIKDLGYEKPTTIQTRAIPLILAKSDVFATAQTGTGKTAAFGLGMLQ 61
Query: 369 KLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNV 548
+L ++ + LR L+++PTREL++Q ++ K G+ A ++GG+ +E Q +
Sbjct: 62 RLRKTSDDKQ--RALRGLVIAPTRELSIQIYEDLQSYAKNMGINIAVLVGGKDLESQQKI 119
Query: 549 MSGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
+ DIV+ATPGR L ++ L L ++ I V DE
Sbjct: 120 LK-EGVDIVIATPGRVLE-HVDKGLSLSHVEIFVLDE 154
>UniRef50_Q2YZZ9 Cluster: Putative uncharacterized protein; n=1;
uncultured candidate division OP8 bacterium|Rep:
Putative uncharacterized protein - uncultured candidate
division OP8 bacterium
Length = 453
Score = 111 bits (266), Expect = 2e-23
Identities = 64/156 (41%), Positives = 92/156 (58%)
Frame = +3
Query: 192 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 371
F S+ L +LK + + G+ +PTPIQ IP A++G+DV+A A TGSGKTA F+LPIL +
Sbjct: 3 FSSLHLHPTLLKALKELGFPRPTPIQADAIPPAMSGRDVMASAVTGSGKTAAFLLPILHQ 62
Query: 372 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 551
L+ P RAL+++PTRELA Q L + +L T +++AA+ GG SI Q +
Sbjct: 63 LI-----DRPRGTTRALVITPTRELAAQILEDLNDLAVHTPISAAAVFGGVSIRPQEHAF 117
Query: 552 SGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
D+++ TPGR L KL + +V DE
Sbjct: 118 R-RGVDVLIGTPGRLLDHFRAPYAKLAGLEHLVLDE 152
>UniRef50_Q12B10 Cluster: DEAD/DEAH box helicase-like; n=13;
Proteobacteria|Rep: DEAD/DEAH box helicase-like -
Polaromonas sp. (strain JS666 / ATCC BAA-500)
Length = 422
Score = 111 bits (266), Expect = 2e-23
Identities = 70/163 (42%), Positives = 91/163 (55%), Gaps = 7/163 (4%)
Frame = +3
Query: 192 FQSMGLS---FPV-LKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLP 359
F S+G S P L+ I +GY+ PT IQ + IP L G+DVV A+TGSGKTA F LP
Sbjct: 3 FSSLGFSPALLPAFLRAIGDKGYRAPTAIQSQAIPAILLGRDVVGSAQTGSGKTAAFALP 62
Query: 360 ILEKLL-VPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKF--TGLTSAAILGGESI 530
+L++L P P P R LIL PTRELA Q + K+ + A + GG SI
Sbjct: 63 MLQQLANAPTGTPRP---TRGLILVPTRELAAQVGEAIAGFAKYLPQRVKVAVVFGGVSI 119
Query: 531 EQQFNVMSGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
Q + G + DIVVATPGR L + +LK+ + +V DE
Sbjct: 120 NPQMMNLRGGA-DIVVATPGRLLDLLEHNALKISEVSTLVLDE 161
>UniRef50_A2DES1 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 640
Score = 111 bits (266), Expect = 2e-23
Identities = 58/152 (38%), Positives = 87/152 (57%)
Frame = +3
Query: 204 GLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEKLLVP 383
GL P++ + RG+KQPT IQ + IP L+G+D++ A TGSGKT F++P L +L
Sbjct: 107 GLPAPLMSHLRLRGFKQPTSIQCQAIPCILSGRDIIGCAVTGSGKTLAFIIPCLLHVLA- 165
Query: 384 NNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVMSGSS 563
PT A+ILSPTRELA QT +++ SA ++GG IE Q + S
Sbjct: 166 -QPPTGQYEAAAVILSPTRELAYQTHIECQKIFSLMDKKSACLVGGNDIENQLRAIKNGS 224
Query: 564 PDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
++++ATPGRF+ + + + + +V DE
Sbjct: 225 -NVIIATPGRFIDLLSSSAFNIKKVSYLVIDE 255
>UniRef50_Q978T9 Cluster: ATP-dependent RNA helicase; n=3;
Thermoplasma|Rep: ATP-dependent RNA helicase -
Thermoplasma volcanium
Length = 373
Score = 111 bits (266), Expect = 2e-23
Identities = 60/156 (38%), Positives = 88/156 (56%)
Frame = +3
Query: 192 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 371
F+ L +++ I GY +PT +Q IPIAL G D+V ++TGSGKTA +++PI+
Sbjct: 4 FEEFNLRNELIESIRGTGYSEPTEVQSMAIPIALAGSDLVVRSKTGSGKTAAYLIPII-- 61
Query: 372 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 551
N K +RALIL PTRELA+Q + LGK +G+ + + GG SI +Q ++
Sbjct: 62 -----NNTAKEKGIRALILLPTRELAVQVAKVSEALGKRSGIRTVVVYGGVSINKQIELI 116
Query: 552 SGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
+ +I+V TPGR L + L D + V DE
Sbjct: 117 LRGA-NIIVGTPGRTLDLIDRGILNFDKVSYFVLDE 151
>UniRef50_A5DPU0 Cluster: ATP-dependent RNA helicase MAK5; n=1;
Pichia guilliermondii|Rep: ATP-dependent RNA helicase
MAK5 - Pichia guilliermondii (Yeast) (Candida
guilliermondii)
Length = 754
Score = 111 bits (266), Expect = 2e-23
Identities = 65/153 (42%), Positives = 95/153 (62%), Gaps = 4/153 (2%)
Frame = +3
Query: 189 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILE 368
+ +++ LS + G+ G+K+PT IQRK IP+AL GKDV+ A TGSGKT + +PILE
Sbjct: 185 SMENVSLSTYTINGLAGCGFKEPTAIQRKAIPLALQGKDVIGKATTGSGKTLAYGIPILE 244
Query: 369 KLLVP-NNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTS---AAILGGESIEQ 536
+ L +K K A+I +PTRELA Q + + ++ KF+ L +I GG SI++
Sbjct: 245 RCLAQLESKTNTIKPPTAMIFAPTRELAHQVVDHMNKIAKFSPLAQNGIVSITGGLSIQK 304
Query: 537 QFNVMSGSSPDIVVATPGRFLHICIEMSLKLDN 635
Q ++S P I+VATPGR L + +E S+ L N
Sbjct: 305 QERLLS-HGPSILVATPGRCLEL-MEKSVDLVN 335
>UniRef50_A3EUK2 Cluster: Superfamily II DNA and RNA helicase; n=1;
Leptospirillum sp. Group II UBA|Rep: Superfamily II DNA
and RNA helicase - Leptospirillum sp. Group II UBA
Length = 444
Score = 110 bits (264), Expect = 3e-23
Identities = 61/157 (38%), Positives = 96/157 (61%), Gaps = 1/157 (0%)
Frame = +3
Query: 192 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 371
F+++GLS +L+ + G+ PTPIQ+++IP + G+D++ +A+TG+GKT F+LP+L K
Sbjct: 3 FEALGLSPEILRALNDLGHASPTPIQKQSIPHVIDGRDLLGIAQTGTGKTGGFLLPVLHK 62
Query: 372 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGG-ESIEQQFNV 548
+ G RAL+LSPTRELA Q + ++ K+ + ++GG + I Q+ N+
Sbjct: 63 IAEGRRH---GIRNRALVLSPTRELATQIHQAAKDYAKYLHTNAVLLVGGVDFIRQERNL 119
Query: 549 MSGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
+ DIVVATPGR L +L L N +V+ DE
Sbjct: 120 K--RNWDIVVATPGRLLDHVRRNNLTLANTSLVIIDE 154
>UniRef50_A7U5X2 Cluster: DEAD-box helicase 15; n=2; Plasmodium
falciparum|Rep: DEAD-box helicase 15 - Plasmodium
falciparum
Length = 717
Score = 109 bits (263), Expect = 4e-23
Identities = 69/159 (43%), Positives = 91/159 (57%), Gaps = 8/159 (5%)
Frame = +3
Query: 207 LSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEKLLVPN 386
+S P LK + ++ + PT IQR IP+AL GK ++A + TGSGKT FVLPILE+LL
Sbjct: 94 ISRPFLKVLYEQKFSNPTYIQRDVIPLALEGKSILANSETGSGKTLAFVLPILERLLQSV 153
Query: 387 NKPTPGKNL-------RALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFN 545
N N+ +ALIL PTREL+LQ +R L K+ +T + GG I+QQ
Sbjct: 154 NIKMRRNNMKGSYNITKALILLPTRELSLQCYDVIRSLTKYVTITYSLFCGGIDIKQQEY 213
Query: 546 VMSGSSPDIVVATPGRFLHICIEMSLKLDN-IXIVVFDE 659
+ DI V TPGR L + + S N + IVVFDE
Sbjct: 214 EFKKRN-DIFVCTPGRILDLLLNSSSDFINYLEIVVFDE 251
>UniRef50_Q5KMS9 Cluster: ATP-dependent RNA helicase DBP10; n=1;
Filobasidiella neoformans|Rep: ATP-dependent RNA
helicase DBP10 - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 802
Score = 109 bits (263), Expect = 4e-23
Identities = 68/183 (37%), Positives = 106/183 (57%), Gaps = 25/183 (13%)
Frame = +3
Query: 186 GAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTG--KDVVAMARTGSGKTACFVLP 359
G ++++ + +++ + R +K PTPIQR IP AL+ +D++ MARTGSGKT +++P
Sbjct: 27 GQWRALNVGPDLIRSLLIRKFKTPTPIQRAAIPPALSTPPRDILGMARTGSGKTLAYLIP 86
Query: 360 ILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGK------------------ 485
+L++ G+ RALIL P+RELA+Q ++L +
Sbjct: 87 LLQR----TGSTHHGQGPRALILCPSRELAVQIYTVGKDLARGMNKGKGKGKNKNEDEED 142
Query: 486 -----FTGLTSAAILGGESIEQQFNVMSGSSPDIVVATPGRFLHICIEMSLKLDNIXIVV 650
GL A I+GGE ++ QF MS S+PDIV+ATPGRFLH+ +EM + L ++ V+
Sbjct: 143 EEGKGKEGLRWALIIGGEGMDAQFEKMS-SNPDIVIATPGRFLHLIVEMHMDLRHLQTVI 201
Query: 651 FDE 659
+DE
Sbjct: 202 YDE 204
>UniRef50_Q1FMF9 Cluster: Helicase-like:DbpA, RNA-binding:DEAD/DEAH
box helicase-like; n=1; Clostridium phytofermentans
ISDg|Rep: Helicase-like:DbpA, RNA-binding:DEAD/DEAH box
helicase-like - Clostridium phytofermentans ISDg
Length = 483
Score = 109 bits (262), Expect = 6e-23
Identities = 60/156 (38%), Positives = 87/156 (55%)
Frame = +3
Query: 192 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 371
F L +++ ++ Y +PTPIQ K IP+AL GKD++A ++TGSGKTA F +PI E
Sbjct: 6 FTQYKLCEEIIQALSMLHYIEPTPIQEKVIPLALEGKDIIAKSKTGSGKTAAFAIPICES 65
Query: 372 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 551
++ N P +AL+L PTRELA Q + +G+ + + GG ++Q +
Sbjct: 66 IVWEENLP------QALVLEPTRELAYQVKDEIFNVGRMKRVKVPVVFGGFPFDKQALTL 119
Query: 552 SGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
S IVV TPGR L C +LK N+ V+ DE
Sbjct: 120 KQKS-HIVVGTPGRVLDHCETGTLKCSNVKYVIIDE 154
>UniRef50_A6DIU5 Cluster: Probable ATP dependent RNA helicase; n=1;
Lentisphaera araneosa HTCC2155|Rep: Probable ATP
dependent RNA helicase - Lentisphaera araneosa HTCC2155
Length = 537
Score = 109 bits (262), Expect = 6e-23
Identities = 60/157 (38%), Positives = 94/157 (59%), Gaps = 1/157 (0%)
Frame = +3
Query: 192 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALT-GKDVVAMARTGSGKTACFVLPILE 368
F ++GL + + + +G+K+P+PIQ + IP+ L+ D++ A+TG+GKTA F LPI++
Sbjct: 4 FTALGLEPWITQCLEAKGFKEPSPIQEQAIPVLLSQDHDIIGQAQTGTGKTAAFGLPIVQ 63
Query: 369 KLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNV 548
K+ KP +ALIL PTRELA+Q ++ K G+T+ + GG I Q
Sbjct: 64 KIEPGLKKP------QALILCPTRELAIQVNEEIKSFCKGRGITTVTLYGGAPIMDQKRA 117
Query: 549 MSGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
+ D+VVATPGR +H + L+LD++ +V DE
Sbjct: 118 LK-KGVDLVVATPGRCIHFIEDGKLELDSLEYLVLDE 153
>UniRef50_A4M6V6 Cluster: DEAD/DEAH box helicase domain protein;
n=2; cellular organisms|Rep: DEAD/DEAH box helicase
domain protein - Petrotoga mobilis SJ95
Length = 530
Score = 109 bits (262), Expect = 6e-23
Identities = 63/157 (40%), Positives = 90/157 (57%), Gaps = 1/157 (0%)
Frame = +3
Query: 192 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGK-DVVAMARTGSGKTACFVLPILE 368
FQ MGLS +L I ++GY+ PTPIQ K IP+ L+GK +V+ A+TG+GKTA F +P++E
Sbjct: 4 FQQMGLSDNILSAIDRKGYEAPTPIQEKVIPLLLSGKNNVIGQAQTGTGKTAAFGIPLIE 63
Query: 369 KLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNV 548
+L +++AL+L+PTRELALQ + L L + GG SI Q
Sbjct: 64 RL------DEKANDVQALVLTPTRELALQVCNEIDSLKGNKRLNLLPVYGGVSIGNQIRA 117
Query: 549 MSGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
+ D+VV TPGR + +L + I +V DE
Sbjct: 118 LK-RRVDLVVGTPGRIIDHLNRGTLDITKIKYLVIDE 153
>UniRef50_A0LLL9 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Deltaproteobacteria|Rep: DEAD/DEAH box helicase
domain protein - Syntrophobacter fumaroxidans (strain
DSM 10017 / MPOB)
Length = 533
Score = 109 bits (262), Expect = 6e-23
Identities = 64/159 (40%), Positives = 87/159 (54%), Gaps = 3/159 (1%)
Frame = +3
Query: 192 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 371
F + L P+L+GI ++ TPIQ +P L G D A+TG+GKTA F++ +L +
Sbjct: 118 FHDLDLPAPILRGIADAEFRYCTPIQAALLPHTLNGLDAAGRAQTGTGKTAVFIITMLTQ 177
Query: 372 LLVPNNKPTPGKNL---RALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQF 542
L N G+ RAL+L+PTRELALQ + L + T S AI GG E+Q
Sbjct: 178 FL--RNPAPEGRRKGTPRALVLAPTRELALQIEKETHLLSRHTPFKSVAIFGGMDYEKQK 235
Query: 543 NVMSGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
++G DIVVATPGR L + L L + I+V DE
Sbjct: 236 RRLTGEVIDIVVATPGRLLDFKRQGDLHLSKVEILVIDE 274
>UniRef50_Q9KLE2 Cluster: ATP-dependent RNA helicase DeaD; n=35;
Vibrionales|Rep: ATP-dependent RNA helicase DeaD -
Vibrio cholerae
Length = 663
Score = 109 bits (261), Expect = 8e-23
Identities = 61/157 (38%), Positives = 86/157 (54%), Gaps = 1/157 (0%)
Frame = +3
Query: 192 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 371
F + L+ +L +T+ G+ PTPIQ IP+ L G+D + A+TG+GKTA F LP+L K
Sbjct: 28 FSDLALNSAILSALTEMGFVSPTPIQAAAIPVLLEGRDALGKAQTGTGKTAAFSLPLLNK 87
Query: 372 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGK-FTGLTSAAILGGESIEQQFNV 548
L + KP +A++++PTRELA+Q ++ LG+ GL I GG SI Q
Sbjct: 88 LNLSQYKP------QAIVMAPTRELAIQVAAEIKNLGQNIKGLKVLEIYGGASILDQMRA 141
Query: 549 MSGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
+ S IVV TPGR + L LD + DE
Sbjct: 142 LK-SGAHIVVGTPGRVKDLITRDRLHLDECHTFILDE 177
>UniRef50_Q087U7 Cluster: DEAD/DEAH box helicase domain protein;
n=5; Gammaproteobacteria|Rep: DEAD/DEAH box helicase
domain protein - Shewanella frigidimarina (strain NCIMB
400)
Length = 421
Score = 109 bits (261), Expect = 8e-23
Identities = 62/165 (37%), Positives = 96/165 (58%), Gaps = 8/165 (4%)
Frame = +3
Query: 189 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILE 368
+F + L ++ + + Y+QPTPIQ + IP+ L+GKDV+A A+TG+GKTA F LP+L
Sbjct: 2 SFADLSLHPILINRLAELKYQQPTPIQLQAIPVILSGKDVMAGAQTGTGKTAAFALPLLH 61
Query: 369 KLLV--------PNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGE 524
+LL P+ + + AL+L PTRELA Q + + + +TS + GG
Sbjct: 62 QLLTHQDNLAAQPDTQHINSTPITALVLVPTRELAQQVHSSIEQYAYGSSVTSVMVYGGV 121
Query: 525 SIEQQFNVMSGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
SI +Q ++ + I+VATPGR L + + +L L + +VFDE
Sbjct: 122 SIGEQIRQLANGT-HILVATPGRLLDLLRKRALSLSQLTHLVFDE 165
>UniRef50_Q3ZDP1 Cluster: Vasa-like protein; n=7; Neoptera|Rep:
Vasa-like protein - Anopheles gambiae (African malaria
mosquito)
Length = 596
Score = 109 bits (261), Expect = 8e-23
Identities = 61/158 (38%), Positives = 90/158 (56%), Gaps = 1/158 (0%)
Frame = +3
Query: 189 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILE 368
+F+ GL V+ + K Y +PTPIQR IPI L G+D++A A+TGSGKTA F+LP++
Sbjct: 175 SFERSGLREEVMTNVRKSSYTKPTPIQRYAIPIILNGRDLMACAQTGSGKTAAFMLPMIH 234
Query: 369 KLL-VPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFN 545
LL ++ +N +I++PTRELA+Q R+ T L GG +++ Q
Sbjct: 235 HLLDKEDSLELRTRNPYIVIVAPTRELAIQIHDEGRKFAHGTKLKVCVSYGGTAVQHQLQ 294
Query: 546 VMSGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
+M G ++VATPGR L + +N+ VV DE
Sbjct: 295 LMRGGC-HVLVATPGRLLDFIDRGYVTFENVNFVVLDE 331
>UniRef50_Q4P3U9 Cluster: ATP-dependent rRNA helicase RRP3; n=20;
Eukaryota|Rep: ATP-dependent rRNA helicase RRP3 -
Ustilago maydis (Smut fungus)
Length = 551
Score = 109 bits (261), Expect = 8e-23
Identities = 64/157 (40%), Positives = 89/157 (56%), Gaps = 1/157 (0%)
Frame = +3
Query: 192 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 371
F +G+ +++ T G+K PTPIQ K IP AL +DV+ +A+TGSGKTA F +PIL+
Sbjct: 106 FSDLGVIPQIVEACTNMGFKHPTPIQVKAIPEALQARDVIGLAQTGSGKTAAFTIPILQA 165
Query: 372 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 551
L N KP A +L+PTRELA Q + V LG G+ SA I+GG + Q ++
Sbjct: 166 LW-DNPKP-----FFACVLAPTRELAYQISQQVEALGSTIGVRSATIVGGMDMMSQ-SIA 218
Query: 552 SGSSPDIVVATPGRFL-HICIEMSLKLDNIXIVVFDE 659
P ++VATPGR H+ L + +V DE
Sbjct: 219 LSKRPHVIVATPGRLQDHLENTKGFSLRGLQYLVMDE 255
>UniRef50_A3ZWP8 Cluster: ATP-dependent RNA helicase; n=1;
Blastopirellula marina DSM 3645|Rep: ATP-dependent RNA
helicase - Blastopirellula marina DSM 3645
Length = 428
Score = 108 bits (260), Expect = 1e-22
Identities = 61/156 (39%), Positives = 91/156 (58%)
Frame = +3
Query: 192 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 371
+ M LS + + Y QP+PIQ IP+AL G+DV+ ARTG+GKTA F +PI+E+
Sbjct: 6 YADMALSVEMKAALEAARYIQPSPIQAAIIPLALEGRDVLGQARTGTGKTAAFGIPIIER 65
Query: 372 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 551
L + P +N +ALIL+PTRELA+Q + +L + A+ GG+ + Q +
Sbjct: 66 L---EHGPN-SRNPQALILTPTRELAVQVRDEIAKLTHGQRINVVAVYGGKPLRSQMEKL 121
Query: 552 SGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
+P IVV TPGR + + +L+L+ + VV DE
Sbjct: 122 K-RAPHIVVGTPGRVIDLMTRRALQLEMLRTVVLDE 156
>UniRef50_A7U5W7 Cluster: DEAD-box helicase 2; n=6; Plasmodium|Rep:
DEAD-box helicase 2 - Plasmodium falciparum
Length = 562
Score = 108 bits (260), Expect = 1e-22
Identities = 60/157 (38%), Positives = 94/157 (59%), Gaps = 1/157 (0%)
Frame = +3
Query: 192 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 371
F+ + + +L+ I + G+K+PT IQR+ +P A KD++ ++ TGSGKTACF++PIL+
Sbjct: 158 FEDLNICEEILESIKELGWKKPTEIQREILPHAFLKKDIIGLSETGSGKTACFIIPILQD 217
Query: 372 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 551
L V NK ++ AL++SPTREL +Q + + LG + I GG I Q ++
Sbjct: 218 LKV--NK----QSFYALVISPTRELCIQISQNFQALGMNLLINICTIYGGVDIVTQ-SLN 270
Query: 552 SGSSPDIVVATPGRFL-HICIEMSLKLDNIXIVVFDE 659
P+++V+TPGR L H+ L N+ +VFDE
Sbjct: 271 LAKKPNVIVSTPGRILDHLNNTKGFNLKNLKYLVFDE 307
>UniRef50_Q9PGP6 Cluster: ATP-dependent RNA helicase; n=10; cellular
organisms|Rep: ATP-dependent RNA helicase - Xylella
fastidiosa
Length = 614
Score = 108 bits (259), Expect = 1e-22
Identities = 60/157 (38%), Positives = 88/157 (56%), Gaps = 1/157 (0%)
Frame = +3
Query: 192 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 371
F +GLS V++ +TK GY+ P+PIQ TIP L G+DV+ A+TG+GKTA F LP+L +
Sbjct: 17 FADLGLSDAVMQAVTKIGYETPSPIQAATIPALLAGRDVLGQAQTGTGKTAAFALPLLTR 76
Query: 372 LLVPNNKPTPGKNLRALILSPTRELALQTLR-FVRELGKFTGLTSAAILGGESIEQQFNV 548
++ KP + L+L+PTRELA+Q F R +G + GG+S QQ
Sbjct: 77 TVLNQVKP------QVLVLAPTRELAIQVAEAFQRYAASISGFRVLPVYGGQSYGQQLAA 130
Query: 549 MSGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
+ ++V TPGR + +L L + +V DE
Sbjct: 131 LK-RGVHVIVGTPGRVIDHLERGTLDLSELKTLVLDE 166
>UniRef50_Q4FSS4 Cluster: Possible ATP-dependent DEAD/DEAH box
RNA-helicase; n=4; Gammaproteobacteria|Rep: Possible
ATP-dependent DEAD/DEAH box RNA-helicase - Psychrobacter
arcticum
Length = 567
Score = 108 bits (259), Expect = 1e-22
Identities = 61/157 (38%), Positives = 89/157 (56%), Gaps = 1/157 (0%)
Frame = +3
Query: 192 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 371
F + ++ P+L + + GY PTPIQ + IP AL G+D++ A+TGSGKTA FV+P+L++
Sbjct: 46 FTDLNIAKPILSALERSGYTHPTPIQAEAIPFALQGRDLLLSAQTGSGKTAAFVIPVLDR 105
Query: 372 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGK-FTGLTSAAILGGESIEQQFNV 548
L + + K +ALIL+PTRELA Q VR K GL ++GG Q
Sbjct: 106 L---SRATSFDKLTKALILTPTRELAQQVHDSVRTYSKDMRGLFCVPLVGGAPYNGQITA 162
Query: 549 MSGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
+ ++VATPGR L + L ++ I+V DE
Sbjct: 163 LK-KGVQVIVATPGRLLDHINAGRVDLSSLEILVLDE 198
>UniRef50_Q185X0 Cluster: ATP-dependent RNA helicase; n=3;
Clostridium difficile|Rep: ATP-dependent RNA helicase -
Clostridium difficile (strain 630)
Length = 497
Score = 108 bits (259), Expect = 1e-22
Identities = 61/156 (39%), Positives = 92/156 (58%)
Frame = +3
Query: 192 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 371
F+ L+ +LK + GY P+ +QR+ IP L G+++V ++TGSGKTA F +P+ E
Sbjct: 5 FEKFKLNEKILKSLKSLGYNIPSRVQREVIPKLLKGQNLVVRSKTGSGKTASFAIPLCEN 64
Query: 372 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 551
+ V N N++ALI+ PTRELALQ + ++G+ + +AI G +SI+ Q +
Sbjct: 65 INVDYN------NIQALIVVPTRELALQVKDEISDIGRLKKVRCSAIFGKQSIKDQIAEL 118
Query: 552 SGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
IVVATPGR L S+KL+N+ +V DE
Sbjct: 119 K-QRVHIVVATPGRILDHINRGSIKLENVKYLVIDE 153
>UniRef50_A4BHZ9 Cluster: ATP-dependent RNA helicase; n=1; Reinekea
sp. MED297|Rep: ATP-dependent RNA helicase - Reinekea
sp. MED297
Length = 534
Score = 108 bits (259), Expect = 1e-22
Identities = 58/156 (37%), Positives = 89/156 (57%)
Frame = +3
Query: 192 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 371
F + L +++ I + GY+ +PIQ T+P AL G D + A+TG+GKTA F++ +
Sbjct: 29 FHDLFLPIALMRAIQEVGYEYCSPIQAMTLPYALAGHDCIGKAQTGTGKTAAFLITAITD 88
Query: 372 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 551
LL + RALIL+PTRELALQ + L K++ L AA++GG ++Q +
Sbjct: 89 LLEHRLEEQYVGEPRALILAPTRELALQIAEDAKALTKYSRLKVAAVVGGMDFDKQKQQL 148
Query: 552 SGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
DI+VATPGR + ++ LD I +++ DE
Sbjct: 149 HEQRTDILVATPGRLIDFMNRKAVFLDQIEMLIIDE 184
>UniRef50_Q54Y81 Cluster: Putative RNA helicase; n=2; Dictyostelium
discoideum|Rep: Putative RNA helicase - Dictyostelium
discoideum AX4
Length = 834
Score = 108 bits (259), Expect = 1e-22
Identities = 63/160 (39%), Positives = 97/160 (60%), Gaps = 4/160 (2%)
Frame = +3
Query: 192 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 371
+Q L +L+ I + GY++P+PIQ ++IPI+LTG+D++ +A TGSGKT FV+P+L
Sbjct: 415 WQESNLPREILEAIRQLGYEKPSPIQMQSIPISLTGRDILGIAETGSGKTCAFVIPMLIY 474
Query: 372 L-LVPN-NKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQ-F 542
+ P K T AL+++PTREL Q + R + G +++GG+SIE Q +
Sbjct: 475 ISKQPRLTKDTEADGPYALVMAPTRELVQQIEKETRNFAQHFGFRVVSLVGGQSIEDQAY 534
Query: 543 NVMSGSSPDIVVATPGRFLHICIEMS-LKLDNIXIVVFDE 659
V G +I++ATPGR L+ C+E L L+ +V DE
Sbjct: 535 QVSKGC--EIIIATPGR-LNDCLEKRYLVLNQCNYIVLDE 571
>UniRef50_Q9K7L3 Cluster: RNA helicase; n=2; Bacillus|Rep: RNA
helicase - Bacillus halodurans
Length = 389
Score = 107 bits (258), Expect = 2e-22
Identities = 54/156 (34%), Positives = 94/156 (60%)
Frame = +3
Query: 192 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 371
FQ + P L+ +T +G +PT IQ++ IP AL G++++ ++TG+GKT ++LP+L K
Sbjct: 4 FQQWPIGEPFLEALTNQGITEPTEIQQQVIPEALDGQNLIVHSQTGTGKTLAYLLPMLTK 63
Query: 372 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 551
+ P + +ALIL+PT+ELA+Q + ++L T +T ++GG +I++Q +
Sbjct: 64 -----TEELP-EQTQALILAPTQELAMQIVEVAKQLTATTSITVLPLIGGANIKRQVEKL 117
Query: 552 SGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
P + V TPGR L + LK+ ++ ++V DE
Sbjct: 118 KKKKPHVAVGTPGRILELMEMKKLKVPHVKMIVVDE 153
>UniRef50_Q6MN67 Cluster: ATP-dependent RNA helicase; n=3;
Deltaproteobacteria|Rep: ATP-dependent RNA helicase -
Bdellovibrio bacteriovorus
Length = 505
Score = 107 bits (258), Expect = 2e-22
Identities = 66/161 (40%), Positives = 94/161 (58%), Gaps = 1/161 (0%)
Frame = +3
Query: 180 SSGAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLP 359
S F ++ LS +L + + G++ TPIQ+++IP+ L GKD++ A+TGSGKTA F LP
Sbjct: 45 SQNEFSTLPLSPELLTVVQELGFETLTPIQQESIPLLLAGKDIIGQAKTGSGKTAAFSLP 104
Query: 360 ILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELG-KFTGLTSAAILGGESIEQ 536
IL K+ N P L+ALIL PTRELA Q + +R+LG + GL A+ GG+S +
Sbjct: 105 ILNKI----NLDQP--LLQALILCPTRELASQVVTEIRKLGRRLPGLKVLAMTGGQSGRE 158
Query: 537 QFNVMSGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
Q + + + IVV TPGR + L + VV DE
Sbjct: 159 QADALE-NGVQIVVGTPGRLADFVGRNRIDLSAVKTVVLDE 198
>UniRef50_Q484Q1 Cluster: RNA helicase DeaD; n=1; Colwellia
psychrerythraea 34H|Rep: RNA helicase DeaD - Colwellia
psychrerythraea (strain 34H / ATCC BAA-681)
(Vibriopsychroerythus)
Length = 611
Score = 107 bits (258), Expect = 2e-22
Identities = 64/158 (40%), Positives = 86/158 (54%), Gaps = 1/158 (0%)
Frame = +3
Query: 189 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILE 368
AF S+GL +L + G+ T IQ TIP L GKDV+ A+TG+GKTA F LP L
Sbjct: 16 AFASLGLPENLLSAVLSIGFTSATDIQALTIPPLLAGKDVLGEAQTGTGKTAAFGLPALA 75
Query: 369 KLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGK-FTGLTSAAILGGESIEQQFN 545
K+ KP + ++L+PTRELA+Q + GK GL A + GG+S QF
Sbjct: 76 KIDTSIKKP------QLMVLAPTRELAMQVAEAIESFGKDMKGLRVATLYGGQSYGPQFQ 129
Query: 546 VMSGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
+ + +VV TPGR + SLKLD + + V DE
Sbjct: 130 QLERGA-QVVVGTPGRLMDHLRRKSLKLDELRVCVLDE 166
>UniRef50_Q0M1B5 Cluster: Helicase-like:DEAD/DEAH box helicase-like;
n=11; Alphaproteobacteria|Rep: Helicase-like:DEAD/DEAH
box helicase-like - Caulobacter sp. K31
Length = 678
Score = 107 bits (258), Expect = 2e-22
Identities = 60/156 (38%), Positives = 88/156 (56%)
Frame = +3
Query: 192 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 371
F +GLS L+ + GY TPIQ IP+AL G+DV+ +A+TG+GKTA F LP+++K
Sbjct: 4 FSELGLSPTTLQAVADTGYTTATPIQAAAIPVALAGQDVLGIAQTGTGKTAAFTLPLIDK 63
Query: 372 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 551
L+ N + RAL+++PTRELA Q + K T L+ A ++GG S Q +
Sbjct: 64 LM---NGRAKARMPRALVIAPTRELADQVASSFEKYAKGTKLSWALLIGGVSFGDQEKKL 120
Query: 552 SGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
D+++ATPGR L L + + +V DE
Sbjct: 121 D-RGVDVLIATPGRLLDHFERGKLLMTGVQFLVVDE 155
>UniRef50_A6PQ62 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Victivallis vadensis ATCC BAA-548|Rep: DEAD/DEAH
box helicase domain protein - Victivallis vadensis ATCC
BAA-548
Length = 542
Score = 107 bits (258), Expect = 2e-22
Identities = 64/157 (40%), Positives = 89/157 (56%), Gaps = 1/157 (0%)
Frame = +3
Query: 192 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 371
F + L V GI G++ TPIQ T+P L G+D+ A+TG+GKTA F+L + +
Sbjct: 127 FLDLPLHEDVQFGIQHAGFEYCTPIQALTLPALLEGRDLAGKAQTGTGKTAAFLLAVFTR 186
Query: 372 LL-VPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNV 548
LL P + PG RAL+L+PTRELA+Q + L FTGLTS + GG E+Q
Sbjct: 187 LLNHPLEERKPGCP-RALVLAPTRELAMQIQKDAEVLEIFTGLTSVVVFGGMDHEKQRRS 245
Query: 549 MSGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
+ D+V+ TPGR + SLKL + ++V DE
Sbjct: 246 LE-QPVDLVIGTPGRIIDYSRGGSLKLSKVEVLVIDE 281
>UniRef50_A1KUM8 Cluster: Putative ATP-dependent RNA helicase; n=4;
Neisseria|Rep: Putative ATP-dependent RNA helicase -
Neisseria meningitidis serogroup C / serotype 2a (strain
ATCC 700532 /FAM18)
Length = 483
Score = 107 bits (258), Expect = 2e-22
Identities = 64/161 (39%), Positives = 95/161 (59%), Gaps = 2/161 (1%)
Frame = +3
Query: 183 SGAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPI 362
S F S+GL ++ +T +GY+ PTPIQ IP AL G D++A A+TG+GKTA F+LP
Sbjct: 28 SNPFSSLGLGTELVSALTAQGYENPTPIQAAAIPKALAGHDLLAAAQTGTGKTAAFMLPS 87
Query: 363 LEKL-LVPNNKPTPGKN-LRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQ 536
LE+L +P + +R L+L+PTRELA Q + V+ K L + GG ++++
Sbjct: 88 LERLKRYATASTSPAMHPVRMLVLTPTRELADQIDQNVQSYIKNLPLRHTVLFGGMNMDK 147
Query: 537 QFNVMSGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
Q + +IVVAT GR L + ++ L+ + IVV DE
Sbjct: 148 QTADLRAGC-EIVVATVGRLLDHVKQKNISLNKVEIVVLDE 187
>UniRef50_A7S2R2 Cluster: Predicted protein; n=5; Eumetazoa|Rep:
Predicted protein - Nematostella vectensis
Length = 643
Score = 107 bits (258), Expect = 2e-22
Identities = 63/158 (39%), Positives = 95/158 (60%), Gaps = 2/158 (1%)
Frame = +3
Query: 192 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 371
F +S L G+ K G+ PT IQ++ IP+AL+G+DV+ A+TGSGKT F++PI+E
Sbjct: 52 FSDFPISKRTLDGLMKAGFVTPTDIQKQGIPVALSGRDVLGAAKTGSGKTLAFLIPIIET 111
Query: 372 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIE-QQFNV 548
L K T L AL++SPTRELA QT + ++G L++ I+GG+ ++ +Q +
Sbjct: 112 LW--RQKWTSMDGLGALVISPTRELAYQTFEVLVKIGNKHDLSAGLIIGGKDLKNEQKRI 169
Query: 549 MSGSSPDIVVATPGRFL-HICIEMSLKLDNIXIVVFDE 659
M +IVV TPGR L H+ + ++ I+V DE
Sbjct: 170 M---KTNIVVCTPGRLLQHMDETPNFDCTSLQILVLDE 204
>UniRef50_Q5KN79 Cluster: ATP-dependent RNA helicase DBP4; n=1;
Filobasidiella neoformans|Rep: ATP-dependent RNA
helicase DBP4 - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 859
Score = 107 bits (258), Expect = 2e-22
Identities = 55/157 (35%), Positives = 94/157 (59%), Gaps = 1/157 (0%)
Frame = +3
Query: 192 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 371
F + +S KG+ + PTPIQ IP AL +D++ A+TGSGKT F++P+LE+
Sbjct: 62 FSELPMSSKTQKGLKSSHFLNPTPIQSLAIPPALQARDILGSAKTGSGKTLAFLIPLLER 121
Query: 372 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 551
L + P G L A+++SPTRELA+QT +R++GK+ ++ ++GG+ ++++ +
Sbjct: 122 LYLEKWGPMDG--LGAVVISPTRELAVQTFMQLRDIGKYHNFSAGLVIGGKPLKEEQERL 179
Query: 552 SGSSPDIVVATPGRFL-HICIEMSLKLDNIXIVVFDE 659
+I++ATPGR L H+ + + ++V DE
Sbjct: 180 --GRMNILIATPGRLLQHLDSTVGFDSSAVKVLVLDE 214
>UniRef50_UPI0000DAE40A Cluster: hypothetical protein
Rgryl_01000266; n=1; Rickettsiella grylli|Rep:
hypothetical protein Rgryl_01000266 - Rickettsiella
grylli
Length = 433
Score = 107 bits (257), Expect = 2e-22
Identities = 61/139 (43%), Positives = 87/139 (62%), Gaps = 1/139 (0%)
Frame = +3
Query: 192 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 371
F + +L GI +GY+ TPIQ K IP L G+DVV +A+TG+GKTA + LP+L++
Sbjct: 15 FTEFNFNTQILSGIQTQGYRTATPIQIKAIPAILQGRDVVGLAQTGTGKTAAYALPLLQQ 74
Query: 372 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGE-SIEQQFNV 548
L + PG+ LRALILSPTR+LA Q + G+ T L A I GG+ + +Q+ +
Sbjct: 75 L----TEGPPGQ-LRALILSPTRDLADQICVAMNHFGRQTHLRCATIYGGKINYTRQYQL 129
Query: 549 MSGSSPDIVVATPGRFLHI 605
++G DI+VA PGR L +
Sbjct: 130 LTG-GVDIIVACPGRLLDL 147
>UniRef50_Q9KNA4 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=48; Gammaproteobacteria|Rep: ATP-dependent RNA
helicase, DEAD box family - Vibrio cholerae
Length = 452
Score = 107 bits (257), Expect = 2e-22
Identities = 61/156 (39%), Positives = 87/156 (55%)
Frame = +3
Query: 192 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 371
F+ +GL +LK + +KQ T IQ++ IP+ + G+D++A ++TGSGKT FVLP+L K
Sbjct: 7 FKDLGLDNRLLKNLAHYNFKQATEIQQQAIPLTIAGRDLLASSKTGSGKTLAFVLPMLHK 66
Query: 372 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 551
L K K+ R LIL PTRELA Q +R + T+ I GGE+ Q +
Sbjct: 67 SL--KTKAFSAKDPRGLILVPTRELAKQVYGELRSMLGGLSYTATLITGGENFNDQVKAL 124
Query: 552 SGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
+ P +VATPGR SL L+ + +V DE
Sbjct: 125 A-RGPRFIVATPGRLADHLDHRSLFLEGLETLVLDE 159
>UniRef50_Q0RTL3 Cluster: Cold-shock DeaD box ATP-dependent RNA
helicase; n=2; Bacteria|Rep: Cold-shock DeaD box
ATP-dependent RNA helicase - Frankia alni (strain
ACN14a)
Length = 608
Score = 107 bits (257), Expect = 2e-22
Identities = 59/156 (37%), Positives = 87/156 (55%)
Frame = +3
Query: 192 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 371
F + L +L+ + GY++PTPIQR+ +P + G+D++ A TG+GKTA F LP+L +
Sbjct: 59 FAELALRPELLRSLAALGYEEPTPIQREAVPPLVAGRDLLGQAATGTGKTAAFALPLLHR 118
Query: 372 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 551
L + T +AL+L PTRELA+Q + G+ G + GG I +Q +
Sbjct: 119 L---TDDRTGDHGPQALVLVPTRELAVQVSEAIHRYGRDLGARVLPVYGGAPIGRQVRAL 175
Query: 552 SGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
D+VVATPGR L +L+LD + VV DE
Sbjct: 176 V-QGVDVVVATPGRALDHMGRGTLRLDGLHTVVLDE 210
>UniRef50_A0Z0M4 Cluster: ATP-dependent RNA helicase; n=1; marine
gamma proteobacterium HTCC2080|Rep: ATP-dependent RNA
helicase - marine gamma proteobacterium HTCC2080
Length = 582
Score = 107 bits (257), Expect = 2e-22
Identities = 67/157 (42%), Positives = 85/157 (54%), Gaps = 1/157 (0%)
Frame = +3
Query: 192 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 371
F S+GL + + + GY+ TPIQ TIP+ L G+DVV +A+TG+GKTA F LPIL
Sbjct: 11 FNSLGLPDFLQENLQSLGYETATPIQAGTIPLLLEGRDVVGLAQTGTGKTAAFALPILAN 70
Query: 372 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGK-FTGLTSAAILGGESIEQQFNV 548
+ V P +AL+L PTRELA Q R G+ GL +I GG + QQ
Sbjct: 71 IDVKVRSP------QALVLCPTRELAQQVAEAFRSYGRGMGGLRILSIFGGADMRQQLKS 124
Query: 549 MSGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
+ IVVATPGR L S+ L I VV DE
Sbjct: 125 LR-EGTHIVVATPGRLLDHIERRSIDLTGINAVVLDE 160
>UniRef50_Q95QN2 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 730
Score = 107 bits (257), Expect = 2e-22
Identities = 59/159 (37%), Positives = 92/159 (57%), Gaps = 3/159 (1%)
Frame = +3
Query: 192 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 371
++ G V + + + GY +PTPIQR+ IPI L +DV+ +A TGSGKTA F+LP+L
Sbjct: 303 WEEAGFPDEVYQAVKEIGYLEPTPIQRQAIPIGLQNRDVIGVAETGSGKTAAFLLPLLVW 362
Query: 372 LL-VPNNKPTPGKNL--RALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQF 542
+ +P + ++L A+I++PTRELA Q + GK G+ + +++GG S E Q
Sbjct: 363 ITSLPKMERQEHRDLGPYAIIMAPTRELAQQIEEETNKFGKLLGIKTVSVIGGASREDQ- 421
Query: 543 NVMSGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
+ ++V+ATPGR L + L L+ V+ DE
Sbjct: 422 GMKLRMGVEVVIATPGRLLDVLENRYLLLNQCTYVILDE 460
>UniRef50_A5K9H3 Cluster: Pre-mRNA splicing factor RNA helicase PRP28,
putative; n=2; Eukaryota|Rep: Pre-mRNA splicing factor
RNA helicase PRP28, putative - Plasmodium vivax
Length = 1006
Score = 107 bits (257), Expect = 2e-22
Identities = 63/160 (39%), Positives = 93/160 (58%), Gaps = 4/160 (2%)
Frame = +3
Query: 192 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILE- 368
++ LS +LK I K Y++PTPIQ + IPIAL +D++ +A TGSGKTA FVLP+L
Sbjct: 583 WEESNLSSDLLKAIKKAKYEKPTPIQMQAIPIALEMRDLIGIAETGSGKTAAFVLPMLAY 642
Query: 369 -KLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIE-QQF 542
K L P T ALI++P+RELA+Q + + + A++GG + E Q F
Sbjct: 643 VKQLPPLTYETSQDGPYALIIAPSRELAIQIFDETNKFASYCSCRTVAVVGGRNAEAQAF 702
Query: 543 NVMSGSSPDIVVATPGRFLHICIEMSLK-LDNIXIVVFDE 659
+ G +I++ TPGR +H C+E + L+ V+ DE
Sbjct: 703 ELRKG--VEIIIGTPGR-IHDCLEKAYTVLNQCNYVILDE 739
>UniRef50_A5K917 Cluster: DEAD/DEAH box helicase, putative; n=4;
Plasmodium|Rep: DEAD/DEAH box helicase, putative -
Plasmodium vivax
Length = 737
Score = 107 bits (257), Expect = 2e-22
Identities = 67/158 (42%), Positives = 90/158 (56%), Gaps = 7/158 (4%)
Frame = +3
Query: 207 LSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEKLL-VP 383
+S P LK + + + PT IQR IP+AL GK ++A + TGSGKT FVLPILE+LL P
Sbjct: 111 ISRPFLKVLYEGKFNNPTFIQRDVIPLALEGKSILANSETGSGKTLAFVLPILERLLHSP 170
Query: 384 NNK-----PTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNV 548
N K P ++LIL PTRELALQ V+ + K+ +T + GG ++QQ
Sbjct: 171 NIKMRSYNPRSVCVTKSLILLPTRELALQCYDVVKSMTKYVSITYSLFCGGIDVKQQ-EY 229
Query: 549 MSGSSPDIVVATPGRFLHICIEMSLKLDN-IXIVVFDE 659
DI + TPGR L + + S N + +VVFDE
Sbjct: 230 EYKKKKDIFICTPGRILDLLLNSSSDFINYLEVVVFDE 267
>UniRef50_P0A9P8 Cluster: Cold-shock DEAD box protein A; n=54;
Gammaproteobacteria|Rep: Cold-shock DEAD box protein A -
Shigella flexneri
Length = 629
Score = 107 bits (257), Expect = 2e-22
Identities = 61/157 (38%), Positives = 88/157 (56%), Gaps = 1/157 (0%)
Frame = +3
Query: 192 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 371
F +GL P+L+ + GY++P+PIQ + IP L G+DV+ MA+TGSGKTA F LP+L+
Sbjct: 8 FADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAFSLPLLQN 67
Query: 372 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGK-FTGLTSAAILGGESIEQQFNV 548
L P + L+L+PTRELA+Q + + K G+ A+ GG+ + Q
Sbjct: 68 LDPELKAP------QILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLRA 121
Query: 549 MSGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
+ P IVV TPGR L +L L + +V DE
Sbjct: 122 LR-QGPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDE 157
>UniRef50_Q9NY93 Cluster: Probable ATP-dependent RNA helicase DDX56;
n=25; Theria|Rep: Probable ATP-dependent RNA helicase
DDX56 - Homo sapiens (Human)
Length = 547
Score = 107 bits (257), Expect = 2e-22
Identities = 65/161 (40%), Positives = 97/161 (60%), Gaps = 5/161 (3%)
Frame = +3
Query: 192 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 371
F+ MGL +L+ +T G+ +PT IQ K IP+AL GKD++A ARTGSGKTA + +P+L+
Sbjct: 9 FEHMGLDPRLLQAVTDLGWSRPTLIQEKAIPLALEGKDLLARARTGSGKTAAYAIPMLQL 68
Query: 372 LLVPN-NKPTPGKNLRALILSPTRELALQTLRFVRELGKFTG--LTSAAILGGE-SIEQQ 539
LL P + +R L+L PT+ELA Q +++L + + A + E S+ Q+
Sbjct: 69 LLHRKATGPVVEQAVRGLVLVPTKELARQAQSMIQQLATYCARDVRVANVSAAEDSVSQR 128
Query: 540 FNVMSGSSPDIVVATPGRFLHICIEMSLKL-DNIXIVVFDE 659
+M PD+VV TP R L + SLKL D++ ++V DE
Sbjct: 129 AVLM--EKPDVVVGTPSRILSHLQQDSLKLRDSLELLVVDE 167
>UniRef50_Q4PDT1 Cluster: ATP-dependent RNA helicase DBP3; n=1;
Ustilago maydis|Rep: ATP-dependent RNA helicase DBP3 -
Ustilago maydis (Smut fungus)
Length = 585
Score = 107 bits (257), Expect = 2e-22
Identities = 62/154 (40%), Positives = 87/154 (56%), Gaps = 7/154 (4%)
Frame = +3
Query: 219 VLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILE------KLLV 380
V K + +G+ PTPIQ P+ L KDVV +A TGSGKT F LP L+ K+L
Sbjct: 170 VKKTLDSQGFSTPTPIQACCWPVLLQNKDVVGIAETGSGKTFAFGLPALQHLVTKHKVLD 229
Query: 381 PNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVMSGS 560
K G + L+++PTRELA+QT + +LGK G+ + GG S ++Q +++ S
Sbjct: 230 SGKKKAKGAQVNVLVIAPTRELAIQTEENMAKLGKSMGIGMICLYGGVSKQEQVRLLNQS 289
Query: 561 SP-DIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
P IVV TPGR L + + SL L + +V DE
Sbjct: 290 PPVRIVVGTPGRVLDMARDGSLDLSGVTYLVLDE 323
>UniRef50_UPI00015B61D8 Cluster: PREDICTED: similar to vasa-like
protein; n=1; Nasonia vitripennis|Rep: PREDICTED:
similar to vasa-like protein - Nasonia vitripennis
Length = 732
Score = 107 bits (256), Expect = 3e-22
Identities = 64/162 (39%), Positives = 89/162 (54%), Gaps = 5/162 (3%)
Frame = +3
Query: 189 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILE 368
+F L + I K GY +PTP+Q+ IPI L+G+D++A A+TGSGKTA F++PI+
Sbjct: 303 SFDEANLRVLLNTNIKKSGYTKPTPVQKYGIPILLSGRDLMACAQTGSGKTAAFLIPIIH 362
Query: 369 KLLVPNNKPTPGKNL-----RALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIE 533
LL + + + RALI+SPTREL +Q R+ K + L I GG S
Sbjct: 363 TLLAKDRDLSDMSSANQVEPRALIISPTRELTIQIFDEARKFSKDSVLKCHIIYGGTSTS 422
Query: 534 QQFNVMSGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
Q + DI+VATPGR L + + + D I VV DE
Sbjct: 423 HQMKQIF-QGVDILVATPGRLLDLVGKGKITFDAIEFVVLDE 463
>UniRef50_Q3EBD3 Cluster: DEAD-box ATP-dependent RNA helicase 41;
n=6; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 41 - Arabidopsis thaliana (Mouse-ear cress)
Length = 505
Score = 107 bits (256), Expect = 3e-22
Identities = 60/159 (37%), Positives = 96/159 (60%), Gaps = 3/159 (1%)
Frame = +3
Query: 192 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 371
F S GL +L + GY PTPIQ + IP ALTGK ++A A TGSGKTA F++PI+ +
Sbjct: 112 FTSCGLPPKLLLNLETAGYDFPTPIQMQAIPAALTGKSLLASADTGSGKTASFLVPIISR 171
Query: 372 LLVPNNK-PT-PGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIE-QQF 542
+++ P+ +N A++L+PTREL +Q + LGK +A ++GG+ + Q +
Sbjct: 172 CTTYHSEHPSDQRRNPLAMVLAPTRELCVQVEDQAKMLGKGLPFKTALVVGGDPMSGQLY 231
Query: 543 NVMSGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
+ G ++++ TPGR + + + +++LDNI V DE
Sbjct: 232 RIQQG--VELIIGTPGRVVDLLSKHTIELDNIMTFVLDE 268
>UniRef50_Q8GY84 Cluster: DEAD-box ATP-dependent RNA helicase 10;
n=34; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
10 - Arabidopsis thaliana (Mouse-ear cress)
Length = 456
Score = 107 bits (256), Expect = 3e-22
Identities = 62/163 (38%), Positives = 91/163 (55%), Gaps = 7/163 (4%)
Frame = +3
Query: 192 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 371
F +G+ ++K + G+K P+ IQ + +P AL GKDV+ +A+TGSGKT F +PIL+
Sbjct: 11 FAELGVREELVKACERLGWKNPSKIQAEALPFALEGKDVIGLAQTGSGKTGAFAIPILQA 70
Query: 372 LL--VPNNKPTPGKN----LRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIE 533
LL V +++P G+ A +LSPTRELA+Q LG L A ++GG
Sbjct: 71 LLEYVYDSEPKKGRRPDPAFFACVLSPTRELAIQIAEQFEALGADISLRCAVLVGGIDRM 130
Query: 534 QQFNVMSGSSPDIVVATPGRFL-HICIEMSLKLDNIXIVVFDE 659
QQ + G P ++VATPGR H+ L ++ +V DE
Sbjct: 131 QQ-TIALGKRPHVIVATPGRLWDHMSDTKGFSLKSLKYLVLDE 172
>UniRef50_Q8YXJ0 Cluster: ATP-dependent RNA helicase; n=11;
Cyanobacteria|Rep: ATP-dependent RNA helicase - Anabaena
sp. (strain PCC 7120)
Length = 513
Score = 106 bits (255), Expect = 4e-22
Identities = 63/157 (40%), Positives = 95/157 (60%)
Frame = +3
Query: 189 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILE 368
+F +G+S ++ + K G+ PT IQ + IP L+G+DVV ++TG+GKTA F LPILE
Sbjct: 4 SFPELGISQERVEHLEKLGFTAPTNIQAQAIPQLLSGRDVVGQSQTGTGKTAAFSLPILE 63
Query: 369 KLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNV 548
+ L P K ++A++L+PTRELA+Q + + +GL + AI GG+SI++Q +
Sbjct: 64 R-LDPQQKA-----VQAIVLTPTRELAIQVHDAMAQFVGNSGLRTLAIYGGQSIDRQM-L 116
Query: 549 MSGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
IVV TPGR + + +LKLD + V DE
Sbjct: 117 QLKRGVHIVVGTPGRVIDLLERGNLKLDQVKWFVLDE 153
>UniRef50_Q5FS73 Cluster: ATP-dependent RNA helicase; n=2;
Gluconobacter oxydans|Rep: ATP-dependent RNA helicase -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 432
Score = 106 bits (255), Expect = 4e-22
Identities = 57/160 (35%), Positives = 87/160 (54%)
Frame = +3
Query: 180 SSGAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLP 359
S+ AF + L+ +L+ + + GY +PTPIQ ++IP+ L G+D++ +A+TG+GKTA F LP
Sbjct: 5 SAQAFADLALAPTLLRALDEAGYVKPTPIQAQSIPLLLEGRDLLGLAQTGTGKTASFALP 64
Query: 360 ILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQ 539
+L + L +P P R L+L+PTREL Q + + I GG S Q
Sbjct: 65 LLHR-LAATPRPAPKNGARVLVLAPTRELVSQIADGFESFSRHQPVRVTTIFGGVSQVHQ 123
Query: 540 FNVMSGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
+ DI+VA PGR L + + L + +V DE
Sbjct: 124 VKALE-EGVDIIVAAPGRLLDLIEQGLCDLSQLETLVLDE 162
>UniRef50_Q01PH0 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Solibacter usitatus Ellin6076|Rep: DEAD/DEAH box
helicase domain protein - Solibacter usitatus (strain
Ellin6076)
Length = 422
Score = 106 bits (255), Expect = 4e-22
Identities = 59/156 (37%), Positives = 89/156 (57%)
Frame = +3
Query: 192 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 371
F + LS + + K + +PTPIQ I AL GKD+VA A+TG+GKT F+LP ++
Sbjct: 4 FSELPLSAQLKSNLAKNNFTEPTPIQSLAIEPALAGKDIVATAQTGTGKTLAFLLPTIQL 63
Query: 372 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 551
L +P +RALIL+PTRELALQ + ++ + TG+ +A +GG + Q +
Sbjct: 64 LSTEPRQP----GVRALILTPTRELALQINEALLQIARGTGIRAAVAVGGLNERSQLRDI 119
Query: 552 SGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
G + +IVVATPGR + L + +++ DE
Sbjct: 120 RGGA-NIVVATPGRLYDFMSRGLINLTTVRMLILDE 154
>UniRef50_Q54VF1 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 685
Score = 106 bits (255), Expect = 4e-22
Identities = 56/158 (35%), Positives = 95/158 (60%), Gaps = 2/158 (1%)
Frame = +3
Query: 192 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 371
F+SMGL +L+ + K G++ P+ +Q K+IP++L GKD++A ARTGSGKTA + +PI++K
Sbjct: 25 FESMGLDNRILRALKKMGFQNPSLVQSKSIPLSLQGKDILAKARTGSGKTAAYSIPIIQK 84
Query: 372 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKF-TGLTSAAILGGESIEQQFNV 548
+L+ K K ++A++L PTREL Q ++ + L S LG + +
Sbjct: 85 VLMAKEKSNI-KGVKAVVLVPTRELCEQVKNHFNQVSYYCQQLVSVVQLGNDKTLDEQKG 143
Query: 549 MSGSSPDIVVATPGRFLHICIEMSLKLDN-IXIVVFDE 659
+ PD++V+TP R + +++L + + I+V DE
Sbjct: 144 LLRDIPDVIVSTPTRLVQHLENKTIQLQSTLDILVIDE 181
>UniRef50_Q86XP3 Cluster: ATP-dependent RNA helicase DDX42; n=47;
Coelomata|Rep: ATP-dependent RNA helicase DDX42 - Homo
sapiens (Human)
Length = 938
Score = 106 bits (255), Expect = 4e-22
Identities = 58/157 (36%), Positives = 88/157 (56%)
Frame = +3
Query: 189 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILE 368
+F G ++ I K Y QPTPIQ + +P+AL+G+D++ +A+TGSGKTA F+ P+L
Sbjct: 254 SFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTGSGKTAAFIWPMLI 313
Query: 369 KLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNV 548
++ + PG A+I+ PTREL Q + GK L S A+ GG S+ +Q
Sbjct: 314 HIM-DQKELEPGDGPIAVIVCPTRELCQQIHAECKRFGKAYNLRSVAVYGGGSMWEQAKA 372
Query: 549 MSGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
+ +IVV TPGR + + + L + +VFDE
Sbjct: 373 LQ-EGAEIVVCTPGRLIDHVKKKATNLQRVSYLVFDE 408
>UniRef50_Q9BUQ8 Cluster: Probable ATP-dependent RNA helicase DDX23;
n=50; Eumetazoa|Rep: Probable ATP-dependent RNA helicase
DDX23 - Homo sapiens (Human)
Length = 820
Score = 106 bits (255), Expect = 4e-22
Identities = 63/151 (41%), Positives = 90/151 (59%), Gaps = 4/151 (2%)
Frame = +3
Query: 219 VLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEKL-LVP--NN 389
+L+ I K GYK+PTPIQR+ IPI L +D++ +A TGSGKTA F++P+L + +P +
Sbjct: 402 ILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLIPLLVWITTLPKIDR 461
Query: 390 KPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQ-FNVMSGSSP 566
+ A+IL+PTRELA Q + GK G+ + A++GG S E Q F + G
Sbjct: 462 IEESDQGPYAIILAPTRELAQQIEEETIKFGKPLGIRTVAVIGGISREDQGFRLRMGC-- 519
Query: 567 DIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
+IV+ATPGR + + L L VV DE
Sbjct: 520 EIVIATPGRLIDVLENRYLVLSRCTYVVLDE 550
>UniRef50_Q98RE0 Cluster: ATP-DEPENDENT RNA HELICASE; n=1;
Mycoplasma pulmonis|Rep: ATP-DEPENDENT RNA HELICASE -
Mycoplasma pulmonis
Length = 480
Score = 106 bits (254), Expect = 5e-22
Identities = 60/156 (38%), Positives = 89/156 (57%)
Frame = +3
Query: 192 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 371
F M + +LK + + G+++PT IQ +P A GKD++ A+TG+GKTA F +PIL
Sbjct: 3 FTQMNIKSEILKSLDEIGFEKPTKIQEAVLPFAFEGKDIIGQAQTGTGKTAAFAIPILSN 62
Query: 372 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 551
L N+ ++ L+++PTRELA Q + LGK+T A ILGG S E+Q +
Sbjct: 63 LDCSINR------IQHLVIAPTRELANQIYDQLNILGKYTCSKIALILGGVSYEKQKAAL 116
Query: 552 SGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
+ S +IVVATPGR + + + L +I DE
Sbjct: 117 N-SGVNIVVATPGRLEDLLAQNKIDLSHIKTFTLDE 151
>UniRef50_A6FEC9 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=1; Moritella sp. PE36|Rep: ATP-dependent RNA
helicase, DEAD box family - Moritella sp. PE36
Length = 460
Score = 106 bits (254), Expect = 5e-22
Identities = 56/156 (35%), Positives = 93/156 (59%)
Frame = +3
Query: 192 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 371
FQ G+ ++ I G++Q T +Q IP+ L G D++A ++TGSGKT + LPIL++
Sbjct: 3 FQDFGIDPRLISSIEHLGFEQATEVQEAAIPLILGGCDIMATSQTGSGKTIAYGLPILQR 62
Query: 372 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 551
+L + + +RA+IL+PTRELA+Q ++ LG I+G ES + Q ++
Sbjct: 63 ML--KQRRFEHRAVRAVILAPTRELAIQVHANMKHLGMSLDYQIQLIIGRESFQHQEKLL 120
Query: 552 SGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
+P++++ATPGR L E S+ L+++ +V DE
Sbjct: 121 R-KNPEVLIATPGRLLDHIREKSISLEHLEFLVLDE 155
>UniRef50_A1SQH8 Cluster: DEAD/DEAH box helicase domain protein
precursor; n=2; Actinomycetales|Rep: DEAD/DEAH box
helicase domain protein precursor - Nocardioides sp.
(strain BAA-499 / JS614)
Length = 507
Score = 106 bits (254), Expect = 5e-22
Identities = 58/160 (36%), Positives = 87/160 (54%)
Frame = +3
Query: 180 SSGAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLP 359
S+ F +G+ + + RG QPTPIQ T+P +L G+DV+ RTGSGKT F+LP
Sbjct: 6 SAAGFADLGVPASLAAVLADRGIVQPTPIQAATLPDSLAGRDVLGRGRTGSGKTYAFLLP 65
Query: 360 ILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQ 539
++ + L + +P + RAL+L+PTREL Q ++ L + GLT+ + GG Q
Sbjct: 66 LVAR-LTASGRPAQARKPRALVLAPTRELVNQIEEALKPLARTAGLTTQTVFGGVGQNPQ 124
Query: 540 FNVMSGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
+ + DIV+A PGR + + L + I V DE
Sbjct: 125 VQGLRRGA-DIVLACPGRLEDLIGQGHCDLSQVEITVLDE 163
>UniRef50_Q5CP59 Cluster: DEAD box polypeptide, Y
chromosome-related; n=3; Apicomplexa|Rep: DEAD box
polypeptide, Y chromosome-related - Cryptosporidium
hominis
Length = 702
Score = 106 bits (254), Expect = 5e-22
Identities = 63/161 (39%), Positives = 93/161 (57%), Gaps = 9/161 (5%)
Frame = +3
Query: 204 GLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEKLLVP 383
G+ +L I + Y++PTP+Q+ +IP L G+D++A A+TGSGKTA F+ PI+ K+L
Sbjct: 207 GIHEILLDNIRRVKYERPTPVQKFSIPTVLNGRDLMACAQTGSGKTAAFLFPIVMKMLND 266
Query: 384 NNKPTPGK-NLR--------ALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQ 536
PTP + +LR AL+LSPTRELA+QT R+ TG+ + + GG +
Sbjct: 267 GPPPTPQQSSLRIKRMAYPVALVLSPTRELAIQTYEESRKFCFGTGIRTNVLYGGSEVRS 326
Query: 537 QFNVMSGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
Q + S DI+VATPGR + + L I ++ DE
Sbjct: 327 QIMDLDRGS-DIIVATPGRLRDLIDRGKVNLKLIKFLILDE 366
>UniRef50_P09052 Cluster: ATP-dependent RNA helicase vasa; n=5;
Eukaryota|Rep: ATP-dependent RNA helicase vasa -
Drosophila melanogaster (Fruit fly)
Length = 661
Score = 106 bits (254), Expect = 5e-22
Identities = 61/156 (39%), Positives = 88/156 (56%)
Frame = +3
Query: 192 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 371
F S L ++ + K GYK PTPIQ+ +IP+ +G+D++A A+TGSGKTA F+LPIL K
Sbjct: 247 FTSADLRDIIIDNVNKSGYKIPTPIQKCSIPVISSGRDLMACAQTGSGKTAAFLLPILSK 306
Query: 372 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 551
LL ++ G+ + +I+SPTRELA+Q R+ + L + GG S Q N
Sbjct: 307 LLEDPHELELGRP-QVVIVSPTRELAIQIFNEARKFAFESYLKIGIVYGGTSFRHQ-NEC 364
Query: 552 SGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
+V+ATPGR L + ++ VV DE
Sbjct: 365 ITRGCHVVIATPGRLLDFVDRTFITFEDTRFVVLDE 400
>UniRef50_A5E6W6 Cluster: ATP-dependent rRNA helicase RRP3; n=4;
Saccharomycetaceae|Rep: ATP-dependent rRNA helicase RRP3
- Lodderomyces elongisporus (Yeast) (Saccharomyces
elongisporus)
Length = 504
Score = 106 bits (254), Expect = 5e-22
Identities = 64/158 (40%), Positives = 85/158 (53%), Gaps = 1/158 (0%)
Frame = +3
Query: 189 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILE 368
+F L +L+ I Y QPTPIQ IP AL GKD+V +A TGSGKTA F +PIL+
Sbjct: 99 SFTEFDLVPELLESIQSLKYTQPTPIQAAAIPHALQGKDIVGIAETGSGKTAAFAIPILQ 158
Query: 369 KLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNV 548
L T + AL+L+PTRELA Q LG GL S I+GG S+ +Q
Sbjct: 159 TLY------TAAQPYYALVLAPTRELAFQIKETFDALGSSMGLRSVCIIGGMSMMEQARD 212
Query: 549 MSGSSPDIVVATPGRFL-HICIEMSLKLDNIXIVVFDE 659
+ P +++ATPGR + H+ L + +V DE
Sbjct: 213 LM-RKPHVIIATPGRLIDHLEHTKGFSLKKLQYLVMDE 249
>UniRef50_Q5KNF8 Cluster: Pre-mRNA-splicing ATP-dependent RNA
helicase PRP28; n=1; Filobasidiella neoformans|Rep:
Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 738
Score = 106 bits (254), Expect = 5e-22
Identities = 61/150 (40%), Positives = 89/150 (59%), Gaps = 3/150 (2%)
Frame = +3
Query: 219 VLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEKL--LVPNNK 392
+L I + GYK+P+PIQR+ IPI + +D++ +A+TGSGKTA FV+P+L+ + L P N
Sbjct: 326 ILDIIEEIGYKEPSPIQRQAIPIGMQNRDLIGVAKTGSGKTAAFVIPMLDYIGHLPPLND 385
Query: 393 PTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESI-EQQFNVMSGSSPD 569
ALI++PTRELA Q R G +I+GG S+ EQQF + G+ +
Sbjct: 386 DNRHLGPYALIMAPTRELAQQIETETRRFALPLGYKCVSIVGGRSVEEQQFALRDGA--E 443
Query: 570 IVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
I++ATPGR + + L + VV DE
Sbjct: 444 IIIATPGRLKDMVDKSILVMSQCRYVVMDE 473
>UniRef50_A4QTR1 Cluster: ATP-dependent RNA helicase DBP9; n=4;
Ascomycota|Rep: ATP-dependent RNA helicase DBP9 -
Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 636
Score = 106 bits (254), Expect = 5e-22
Identities = 62/163 (38%), Positives = 94/163 (57%), Gaps = 3/163 (1%)
Frame = +3
Query: 180 SSGAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLP 359
SS +F +GL +L+ + ++ +++PT +Q K IP+AL G+DV+A A+TGSGKTA +VLP
Sbjct: 41 SSSSFADLGLDPRLLQAVAQQSFQKPTLVQSKAIPLALEGRDVLAKAKTGSGKTAAYVLP 100
Query: 360 ILEKLLVPNNKPTPGKN-LRALILSPTRELALQTLRFVRELGKFTG--LTSAAILGGESI 530
IL+ +L + PG + +LIL PTREL +Q + V F + + S
Sbjct: 101 ILQAVL-KRKQINPGATYISSLILVPTRELTVQVTKEVERFSAFCAKEVQVVGLTDKVSD 159
Query: 531 EQQFNVMSGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
Q +++ SSPDIVV+TP +L LD + +V DE
Sbjct: 160 AVQRSLLQSSSPDIVVSTPSTAWRNVDSGALSLDKLTHLVLDE 202
>UniRef50_Q5NN72 Cluster: DNA and RNA helicase; n=3;
Sphingomonadales|Rep: DNA and RNA helicase - Zymomonas
mobilis
Length = 492
Score = 105 bits (253), Expect = 7e-22
Identities = 56/157 (35%), Positives = 94/157 (59%)
Frame = +3
Query: 189 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILE 368
+F +GLS +L+ + + GY++PTP+Q IP L +D++A+A+TG+GKTA FVLP+++
Sbjct: 2 SFADLGLSKELLQAVAELGYEEPTPVQAAAIPSVLMMRDLIAVAQTGTGKTASFVLPMID 61
Query: 369 KLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNV 548
L + + R+LIL PTRELA Q + GK+ L+ + ++GG + +Q
Sbjct: 62 ILA---HGRCRARMPRSLILEPTRELAAQVAENFEKYGKYHKLSMSLLIGGVPMAEQQAA 118
Query: 549 MSGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
+ D+++ATPGR L + + L + ++V DE
Sbjct: 119 LE-KGVDVLIATPGRLLDLFERGKILLSSCEMLVIDE 154
>UniRef50_Q480Z7 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=2; Alteromonadales|Rep: ATP-dependent RNA
helicase, DEAD box family - Colwellia psychrerythraea
(strain 34H / ATCC BAA-681) (Vibriopsychroerythus)
Length = 399
Score = 105 bits (253), Expect = 7e-22
Identities = 57/156 (36%), Positives = 89/156 (57%)
Frame = +3
Query: 192 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 371
F++ L ++ + +GYKQPTPIQ++ IP + G D++ +A+TG+GKTA F LPI+ K
Sbjct: 4 FKAFSLLESIIDRVNLKGYKQPTPIQKECIPALINGNDLLGIAQTGTGKTAAFSLPIINK 63
Query: 372 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 551
N K+ R+LIL+PTRELA Q ++ + + GL + + GG + Q + +
Sbjct: 64 -FGRNKIDIKAKSTRSLILTPTRELASQIMQNIDDYSDGLGLKTKVVYGGVGRQAQVDSI 122
Query: 552 SGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
DI+VATPGR L + + + + V DE
Sbjct: 123 E-LGLDILVATPGRLLDLIETGDINFKALEVFVLDE 157
>UniRef50_Q31AC4 Cluster: DEAD/DEAH box helicase-like protein; n=7;
Prochlorococcus marinus|Rep: DEAD/DEAH box helicase-like
protein - Prochlorococcus marinus (strain MIT 9312)
Length = 593
Score = 105 bits (253), Expect = 7e-22
Identities = 58/161 (36%), Positives = 89/161 (55%), Gaps = 1/161 (0%)
Frame = +3
Query: 180 SSGAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLP 359
+ F G + +L ++ +GYK PTPIQ+ IP + G+D++ A+TG+GKTA F LP
Sbjct: 49 NENGFLDFGFNQSILNSLSNKGYKNPTPIQKAAIPELMLGRDLLGQAQTGTGKTAAFALP 108
Query: 360 ILEKLLVPNNKPTPGKNLRALILSPTRELALQTLR-FVRELGKFTGLTSAAILGGESIEQ 536
++EKL +NK N + L+++PTRELA Q F + T + AI GG
Sbjct: 109 LIEKL--ADNKEL---NAKVLVMTPTRELATQVAESFKSYSSESTNFKTIAIYGGTDYRN 163
Query: 537 QFNVMSGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
Q + D+VV TPGR + + + K+++I +V DE
Sbjct: 164 QIYALK-RKVDVVVGTPGRIMDHIRQGTFKVNSINCLVLDE 203
>UniRef50_A4BBH5 Cluster: Probable ATP-dependent RNA helicase; n=1;
Reinekea sp. MED297|Rep: Probable ATP-dependent RNA
helicase - Reinekea sp. MED297
Length = 448
Score = 105 bits (253), Expect = 7e-22
Identities = 60/156 (38%), Positives = 91/156 (58%)
Frame = +3
Query: 192 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 371
F S L + I + G+ +PT +Q +IP AL GKD++ A TGSGKTA ++LP L +
Sbjct: 2 FASFDLHPKLTAAIEQHGWTEPTDVQTASIPQALDGKDLLISAETGSGKTAAYLLPALHR 61
Query: 372 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 551
+L KP G +R L++ PTRELA Q ++ L + TGL + I GG+ + Q +++
Sbjct: 62 VL-SERKPKAG--IRVLVMVPTRELAQQVMKDCEALTQQTGLKTVIIRGGQEFQYQASLL 118
Query: 552 SGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
+P+IV+ATPGR + S L ++ +V DE
Sbjct: 119 R-RNPEIVIATPGRMTEHLNKNSTDLLDVECLVLDE 153
>UniRef50_A1USG3 Cluster: DEAD/DEAH box helicase domain/helicase
conserved C-terminal domain protein; n=2;
Rhizobiales|Rep: DEAD/DEAH box helicase domain/helicase
conserved C-terminal domain protein - Bartonella
bacilliformis (strain ATCC 35685 / KC583)
Length = 462
Score = 105 bits (253), Expect = 7e-22
Identities = 65/156 (41%), Positives = 88/156 (56%)
Frame = +3
Query: 192 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 371
F ++GLS V+K + GY PTPIQ +TIP L KDV+ +A+TG+GKTA FVLP+L
Sbjct: 8 FDNLGLSAKVIKAVQLAGYTAPTPIQSETIPHVLQHKDVLGIAQTGTGKTASFVLPMLTL 67
Query: 372 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 551
L K + R LIL PTRELA Q + G L A ++GG S + Q +
Sbjct: 68 LEKGRAK---ARMPRTLILEPTRELAAQVKENFDKYGINHRLNVALLIGGVSFDHQDRKL 124
Query: 552 SGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
+ D+++ATPGR L +L L + I+V DE
Sbjct: 125 ERGA-DVLIATPGRLLDHFERGTLLLMGVEILVIDE 159
>UniRef50_Q5BYH3 Cluster: SJCHGC05414 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC05414 protein - Schistosoma
japonicum (Blood fluke)
Length = 325
Score = 105 bits (253), Expect = 7e-22
Identities = 64/161 (39%), Positives = 94/161 (58%), Gaps = 2/161 (1%)
Frame = +3
Query: 183 SGAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPI 362
SG F+ + +S PV + I G+ T IQ K IP L +D++A A+TGSGKT F++P+
Sbjct: 49 SGKFEDLPISEPVKRAIKDMGFTHMTDIQNKCIPQLLEHRDIMACAKTGSGKTLAFLIPV 108
Query: 363 LEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQF 542
+E +L +P G A+I+SPTREL+LQT + EL +FT L I+GG + + +
Sbjct: 109 VELMLSLGLQPRNGTG--AIIISPTRELSLQTYGVLTELIQFTNLRIGLIMGGSNRQTEA 166
Query: 543 -NVMSGSSPDIVVATPGRFL-HICIEMSLKLDNIXIVVFDE 659
N+ G + I+VATPGR L H+ N+ +V DE
Sbjct: 167 QNLEKGVT--ILVATPGRLLDHLTNTKFFLRHNLKALVIDE 205
>UniRef50_Q49K88 Cluster: DEAD box RNA helicase; n=1; Toxoplasma
gondii|Rep: DEAD box RNA helicase - Toxoplasma gondii
Length = 479
Score = 105 bits (253), Expect = 7e-22
Identities = 60/160 (37%), Positives = 90/160 (56%), Gaps = 1/160 (0%)
Frame = +3
Query: 183 SGAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPI 362
S F S+GL + ++ G+K PT IQ + +P AL G+D++A+A TGSGKTA F LPI
Sbjct: 50 SPTFASLGLCSELCASVSTLGWKSPTAIQSEVLPYALQGRDIIALAETGSGKTAAFGLPI 109
Query: 363 LEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQF 542
L++LL + ALIL+PTREL LQ + + +G G+T ++GG Q
Sbjct: 110 LQRLLQRTQR------FYALILAPTRELCLQISQQILAMGGTLGVTVVTLVGGLDHNTQ- 162
Query: 543 NVMSGSSPDIVVATPGRFL-HICIEMSLKLDNIXIVVFDE 659
+ P +VV +PGR + H+ L ++ ++V DE
Sbjct: 163 AIALAKKPHVVVGSPGRVVDHLQQTKGFSLKSVKVLVLDE 202
>UniRef50_P21507 Cluster: ATP-dependent RNA helicase srmB; n=82;
Proteobacteria|Rep: ATP-dependent RNA helicase srmB -
Escherichia coli (strain K12)
Length = 444
Score = 105 bits (253), Expect = 7e-22
Identities = 65/157 (41%), Positives = 86/157 (54%), Gaps = 1/157 (0%)
Frame = +3
Query: 192 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 371
F + L +L+ + +G+ +PT IQ IP AL G+DV+ A TG+GKTA ++LP L+
Sbjct: 6 FSELELDESLLEALQDKGFTRPTAIQAAAIPPALDGRDVLGSAPTGTGKTAAYLLPALQH 65
Query: 372 LL-VPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNV 548
LL P K P R LIL+PTRELA+Q REL K T L A I GG + V
Sbjct: 66 LLDFPRKKSGPP---RILILTPTRELAMQVSDHARELAKHTHLDIATITGGVAYMNHAEV 122
Query: 549 MSGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
S + DIVVAT GR L E + + ++ DE
Sbjct: 123 FS-ENQDIVVATTGRLLQYIKEENFDCRAVETLILDE 158
>UniRef50_P93008 Cluster: DEAD-box ATP-dependent RNA helicase 21;
n=8; Viridiplantae|Rep: DEAD-box ATP-dependent RNA
helicase 21 - Arabidopsis thaliana (Mouse-ear cress)
Length = 733
Score = 105 bits (253), Expect = 7e-22
Identities = 61/161 (37%), Positives = 95/161 (59%), Gaps = 4/161 (2%)
Frame = +3
Query: 189 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILE 368
+++ L+ +LK + + GYK+P+PIQ IP+ L +DV+ +A TGSGKTA FVLP+L
Sbjct: 314 SWEESKLTSELLKAVERAGYKKPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLA 373
Query: 369 KL--LVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQ- 539
+ L P ++ + A++++PTRELA Q + + G +I+GG+SIE+Q
Sbjct: 374 YISRLPPMSEENETEGPYAVVMAPTRELAQQIEEETVKFAHYLGFRVTSIVGGQSIEEQG 433
Query: 540 FNVMSGSSPDIVVATPGRFLHICIEMSLK-LDNIXIVVFDE 659
+ G +IV+ATPGR + C+E L+ VV DE
Sbjct: 434 LKITQGC--EIVIATPGRLID-CLERRYAVLNQCNYVVLDE 471
>UniRef50_Q4PFD9 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=1; Ustilago maydis|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Ustilago maydis (Smut fungus)
Length = 1156
Score = 105 bits (253), Expect = 7e-22
Identities = 57/151 (37%), Positives = 88/151 (58%), Gaps = 1/151 (0%)
Frame = +3
Query: 204 GLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEKLLVP 383
GL L I + GY PTPIQ + +P ++G+D++ +A+TGSGKT F+LP+ +
Sbjct: 482 GLPASCLDVIKRLGYSAPTPIQSQAMPAIMSGRDIIGVAKTGSGKTMAFLLPMFRH--IK 539
Query: 384 NNKPT-PGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVMSGS 560
+ +P P + +I++PTRELA+Q R +R K GL +A + GG I +Q M
Sbjct: 540 DQRPVEPSEGPVGIIMTPTRELAVQIYREMRPFIKALGLRAACVYGGAPISEQIAEMK-K 598
Query: 561 SPDIVVATPGRFLHICIEMSLKLDNIXIVVF 653
+ DIVVATPGR + + S ++ N+ V +
Sbjct: 599 TADIVVATPGRLIDLLTANSGRVTNLYRVTY 629
>UniRef50_Q80Y44 Cluster: Probable ATP-dependent RNA helicase DDX10;
n=14; Eutheria|Rep: Probable ATP-dependent RNA helicase
DDX10 - Mus musculus (Mouse)
Length = 875
Score = 105 bits (253), Expect = 7e-22
Identities = 62/157 (39%), Positives = 94/157 (59%), Gaps = 1/157 (0%)
Frame = +3
Query: 192 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 371
F LS LKG+ + Y+ T IQ++TI +AL GKDV+ A+TGSGKT F++P+LE
Sbjct: 71 FSDFPLSKKTLKGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLEA 130
Query: 372 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 551
L T G L LI+SPTRELA QT +R++GK ++ I+GG+ ++ + +
Sbjct: 131 LYRLQWTSTDG--LGVLIISPTRELAYQTFEVLRKVGKNHDFSAGLIIGGKDLKHEAERI 188
Query: 552 SGSSPDIVVATPGRFL-HICIEMSLKLDNIXIVVFDE 659
++ +I+V TPGR L H+ + N+ ++V DE
Sbjct: 189 --NNINILVCTPGRLLQHMDETICFHATNLQMLVLDE 223
>UniRef50_Q13206 Cluster: Probable ATP-dependent RNA helicase DDX10;
n=24; Coelomata|Rep: Probable ATP-dependent RNA helicase
DDX10 - Homo sapiens (Human)
Length = 875
Score = 105 bits (253), Expect = 7e-22
Identities = 62/157 (39%), Positives = 95/157 (60%), Gaps = 1/157 (0%)
Frame = +3
Query: 192 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 371
F LS LKG+ + Y+ T IQ++TI +AL GKDV+ A+TGSGKT F++P+LE
Sbjct: 71 FSDFPLSKKTLKGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLEA 130
Query: 372 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 551
L T G L LI+SPTRELA QT +R++GK ++ I+GG+ ++ + +
Sbjct: 131 LYRLQWTSTDG--LGVLIISPTRELAYQTFEVLRKVGKNHDFSAGLIIGGKDLKHEAERI 188
Query: 552 SGSSPDIVVATPGRFL-HICIEMSLKLDNIXIVVFDE 659
++ +I+V TPGR L H+ +S ++ ++V DE
Sbjct: 189 --NNINILVCTPGRLLQHMDETVSFHATDLQMLVLDE 223
>UniRef50_Q8A2K2 Cluster: ATP-dependent RNA helicase; n=10; cellular
organisms|Rep: ATP-dependent RNA helicase - Bacteroides
thetaiotaomicron
Length = 647
Score = 105 bits (252), Expect = 9e-22
Identities = 61/158 (38%), Positives = 90/158 (56%), Gaps = 2/158 (1%)
Frame = +3
Query: 192 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIAL-TGKDVVAMARTGSGKTACFVLPILE 368
F+ +G+S + K I + GY+ P P+Q + IP L DVVA+A+TG+GKTA F LP+L+
Sbjct: 4 FEELGVSPEIRKAIEEMGYENPMPVQEEVIPYLLGENNDVVALAQTGTGKTAAFGLPLLQ 63
Query: 369 KLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKF-TGLTSAAILGGESIEQQFN 545
++ V N P ++LIL PTREL LQ + + K+ GL + GG SI+ Q
Sbjct: 64 QIDVKNRVP------QSLILCPTRELCLQIAGDLNDYSKYIDGLKVLPVYGGSSIDSQIR 117
Query: 546 VMSGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
+ I+VATPGR L + ++ L + +V DE
Sbjct: 118 SLK-RGVHIIVATPGRLLDLMERKTVSLSTVHNIVMDE 154
>UniRef50_Q4UBP8 Cluster: RNA helicase, putative; n=4;
Eukaryota|Rep: RNA helicase, putative - Theileria
annulata
Length = 976
Score = 105 bits (252), Expect = 9e-22
Identities = 57/156 (36%), Positives = 88/156 (56%), Gaps = 1/156 (0%)
Frame = +3
Query: 189 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILE 368
+F GL P+LK + KR Y++P PIQ + IP + G+DV+ +A TGSGKT F+LP +
Sbjct: 369 SFSQCGLPDPILKILEKREYERPFPIQMQCIPALMCGRDVIGIAETGSGKTLAFLLPAIR 428
Query: 369 KLL-VPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFN 545
L P+ + G + L+++PTREL +Q + + GL + AI GG I +Q N
Sbjct: 429 HALDQPSLRENDG--MIVLVIAPTRELVIQISNESSKFSRAVGLKTLAIYGGAGIGEQLN 486
Query: 546 VMSGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVF 653
+ + +IV+ TPGR + + K+ N+ V F
Sbjct: 487 ALKRGA-EIVIGTPGRLIDVLTLSKGKVTNLRRVTF 521
>UniRef50_P42305 Cluster: ATP-dependent RNA helicase dbpA; n=9;
Firmicutes|Rep: ATP-dependent RNA helicase dbpA -
Bacillus subtilis
Length = 479
Score = 105 bits (252), Expect = 9e-22
Identities = 60/156 (38%), Positives = 90/156 (57%)
Frame = +3
Query: 192 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 371
F++ +S +L+ + GY +PT +Q+ IP AL KD+V ++TGSGKTA F +P+ E
Sbjct: 4 FKNYQISHDILRALEGLGYTEPTKVQQSVIPAALERKDLVVKSQTGSGKTASFGIPLCEL 63
Query: 372 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 551
NKP +ALIL+PTRELA+Q + +G+F + + A+ G S ++Q +
Sbjct: 64 ANWDENKP------QALILTPTRELAVQVKEDITNIGRFKRIKATAVFGKSSFDKQKAEL 117
Query: 552 SGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
S IVV TPGR L + +L LD + +V DE
Sbjct: 118 KQKS-HIVVGTPGRVLDHIEKGTLPLDRLSYLVIDE 152
>UniRef50_Q81JK1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=30; Firmicutes|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Bacillus anthracis
Length = 481
Score = 105 bits (251), Expect = 1e-21
Identities = 61/160 (38%), Positives = 91/160 (56%)
Frame = +3
Query: 180 SSGAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLP 359
S +F + LS V + +T GY+ PT +Q + IP+AL KD+V ++TGSGKTA F +P
Sbjct: 2 SKKSFSNYALSKEVRRALTGLGYEHPTEVQGEVIPVALQKKDLVVKSQTGSGKTASFGIP 61
Query: 360 ILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQ 539
+ E + NKP +AL+L+PTRELA+Q + +G+F + +AAI G +Q
Sbjct: 62 LCEMVEWEENKP------QALVLTPTRELAVQVKEDITNIGRFKRIKAAAIYGKSPFARQ 115
Query: 540 FNVMSGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
+ IVV TPGR L + +L L+ + +V DE
Sbjct: 116 -KLELKQKTHIVVGTPGRVLDHIEKGTLSLERLKYLVIDE 154
>UniRef50_Q8I0W7 Cluster: Snrnp protein, putative; n=6;
Plasmodium|Rep: Snrnp protein, putative - Plasmodium
falciparum (isolate 3D7)
Length = 1123
Score = 105 bits (251), Expect = 1e-21
Identities = 63/160 (39%), Positives = 92/160 (57%), Gaps = 4/160 (2%)
Frame = +3
Query: 192 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILE- 368
++ LS +LK I K Y++PTPIQ + IPIAL +D++ +A TGSGKTA FVLP+L
Sbjct: 700 WEESNLSNDLLKAIKKAKYEKPTPIQMQAIPIALEMRDLIGIAETGSGKTAAFVLPMLSY 759
Query: 369 -KLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIE-QQF 542
K L P T AL+++P+RELA+Q + + + A++GG + E Q F
Sbjct: 760 VKQLPPLTYETSQDGPYALVIAPSRELAIQIYEETNKFASYCSCRTVAVVGGRNAEAQAF 819
Query: 543 NVMSGSSPDIVVATPGRFLHICIEMSLK-LDNIXIVVFDE 659
+ G +IV+ TPGR L C+E + L+ V+ DE
Sbjct: 820 ELRRG--VEIVIGTPGR-LQDCLEKAYTVLNQCNYVILDE 856
>UniRef50_O22907 Cluster: DEAD-box ATP-dependent RNA helicase 24;
n=7; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 24 - Arabidopsis thaliana (Mouse-ear cress)
Length = 760
Score = 105 bits (251), Expect = 1e-21
Identities = 59/157 (37%), Positives = 91/157 (57%), Gaps = 1/157 (0%)
Frame = +3
Query: 192 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 371
F+ G S ++ I K+ Y++PT IQ + +PI L+G+DV+ +A+TGSGKTA FVLP++
Sbjct: 230 FEDCGFSSQIMSAIKKQAYEKPTAIQCQALPIVLSGRDVIGIAKTGSGKTAAFVLPMIVH 289
Query: 372 LL-VPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNV 548
++ P + G +I +PTRELA Q ++ K GL +A+ GG S +QF
Sbjct: 290 IMDQPELQRDEGP--IGVICAPTRELAHQIFLEAKKFSKAYGLRVSAVYGGMSKHEQFKE 347
Query: 549 MSGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
+ +IVVATPGR + + +L + +V DE
Sbjct: 348 LKAGC-EIVVATPGRLIDMLKMKALTMMRASYLVLDE 383
>UniRef50_A5DU73 Cluster: Pre-mRNA-splicing ATP-dependent RNA
helicase PRP28; n=3; Saccharomycetales|Rep:
Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 -
Lodderomyces elongisporus (Yeast) (Saccharomyces
elongisporus)
Length = 597
Score = 105 bits (251), Expect = 1e-21
Identities = 63/165 (38%), Positives = 91/165 (55%), Gaps = 8/165 (4%)
Frame = +3
Query: 189 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILE 368
++ GL +L + G++QPTP+QR +IPI+L +DVV +A TGSGKT F+LP+L
Sbjct: 186 SWDESGLDPKILASLKSFGFRQPTPVQRASIPISLELRDVVGVAETGSGKTLAFLLPLLH 245
Query: 369 KLLVPNNKPTPGKNLR----ALILSPTRELALQTLRFVRELGKFTGLTSAAILGG----E 524
L + + +R AL+L+PTRELALQ + + GK G +I+GG E
Sbjct: 246 YLSRVDGNYLNYEKVRNEPLALVLAPTRELALQITQEAEKFGKQLGFNVLSIIGGRQYQE 305
Query: 525 SIEQQFNVMSGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
+++Q N++ G IVV TPGR L L +V DE
Sbjct: 306 TMDQIDNMIVGRGVHIVVGTPGRLLDSVERKILNFSKCYYLVMDE 350
>UniRef50_Q9Y6V7 Cluster: Probable ATP-dependent RNA helicase DDX49;
n=34; Eumetazoa|Rep: Probable ATP-dependent RNA helicase
DDX49 - Homo sapiens (Human)
Length = 483
Score = 105 bits (251), Expect = 1e-21
Identities = 65/157 (41%), Positives = 88/157 (56%), Gaps = 1/157 (0%)
Frame = +3
Query: 192 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 371
F +GLS +++ + G KQPTP+Q IP L G+D + A+TGSGKTA FVLPIL+K
Sbjct: 4 FAELGLSSWLVEQCRQLGLKQPTPVQLGCIPAILEGRDCLGCAKTGSGKTAAFVLPILQK 63
Query: 372 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 551
L + P + L+L+PTRELA Q R LGK GL I+GG + Q +
Sbjct: 64 L---SEDP---YGIFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIIVGGMDMVAQALEL 117
Query: 552 SGSSPDIVVATPGRFL-HICIEMSLKLDNIXIVVFDE 659
S P +V+ATPGR H+ + + I +V DE
Sbjct: 118 S-RKPHVVIATPGRLADHLRSSNTFSIKKIRFLVMDE 153
>UniRef50_A3TJG3 Cluster: ATP-dependent RNA helicase; n=5;
Actinomycetales|Rep: ATP-dependent RNA helicase -
Janibacter sp. HTCC2649
Length = 514
Score = 104 bits (250), Expect = 2e-21
Identities = 59/159 (37%), Positives = 89/159 (55%)
Frame = +3
Query: 183 SGAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPI 362
+ F +G+ +++ + +R PTPIQ T+P +L G+DV+ RTGSGKT F+LP+
Sbjct: 17 TAGFGRLGVPESLVRVLAERDILSPTPIQAATLPDSLAGRDVLGRGRTGSGKTYAFLLPM 76
Query: 363 LEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQF 542
L +L + K RALIL+PTRELA+Q + L + G+TS + GG Q
Sbjct: 77 LARLSAGGTR-RQAKRPRALILAPTRELAIQIDEALAPLAQPLGITSKTVFGGVGQGPQV 135
Query: 543 NVMSGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
N ++ D+VVA PGR + + + LD + I + DE
Sbjct: 136 NAIT-RGVDVVVACPGRLEDLMNQGHVILDAVEITILDE 173
>UniRef50_Q2FKY7 Cluster: DEAD/DEAH box helicase-like; n=1;
Methanospirillum hungatei JF-1|Rep: DEAD/DEAH box
helicase-like - Methanospirillum hungatei (strain JF-1 /
DSM 864)
Length = 531
Score = 104 bits (250), Expect = 2e-21
Identities = 59/158 (37%), Positives = 92/158 (58%), Gaps = 1/158 (0%)
Frame = +3
Query: 189 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILE 368
+F + LS ++K I GY++PTPIQ++ IP+ L G DV A TG+GKTA F +P +E
Sbjct: 5 SFSDLQLSPGIIKAIRDIGYEEPTPIQQEVIPLILAGNDVAGQAYTGTGKTAAFGIPAIE 64
Query: 369 KLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKF-TGLTSAAILGGESIEQQFN 545
L P N +N++ ++L P+RELA+Q + +L G++ + GG+ IE+Q
Sbjct: 65 -LCQPAN-----RNVQTIVLCPSRELAVQVGTELNKLAMHKKGISILPVYGGQPIERQIK 118
Query: 546 VMSGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
+S I++ TPGR + +L LD + +VV DE
Sbjct: 119 ALS-RGVQIIIGTPGRVIDHIKRKTLLLDAVSLVVLDE 155
>UniRef50_Q9P9G7 Cluster: DEAD-box RNA helicase; n=3;
Methanosarcinaceae|Rep: DEAD-box RNA helicase -
Methanococcoides burtonii
Length = 522
Score = 104 bits (250), Expect = 2e-21
Identities = 58/157 (36%), Positives = 90/157 (57%)
Frame = +3
Query: 189 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILE 368
+F+ +G+ +L+ I + +++PT IQ+ IP+ L GKD++ A TGSGKT F I++
Sbjct: 3 SFKKLGIEDAILRSIEDKKFEEPTEIQKMAIPLILEGKDIIGGAATGSGKTLAFGCGIIQ 62
Query: 369 KLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNV 548
K+ G +RAL+L+PTRELA Q ++E + L A I GG +I Q
Sbjct: 63 KI-------EKGNGIRALVLTPTRELAEQVQNSLKEFSRHKQLRVAPIYGGVAINPQIRQ 115
Query: 549 MSGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
+ + D+VVATPGR L ++ L ++ I+V DE
Sbjct: 116 LERA--DVVVATPGRLLDHIERGTIDLGDVEILVLDE 150
>UniRef50_Q03532 Cluster: ATP-dependent RNA helicase HAS1; n=70;
Eukaryota|Rep: ATP-dependent RNA helicase HAS1 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 505
Score = 104 bits (250), Expect = 2e-21
Identities = 58/157 (36%), Positives = 88/157 (56%), Gaps = 1/157 (0%)
Frame = +3
Query: 192 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 371
F+ + LS P LK I K G+ T +Q +TIP L G+DV+ A+TGSGKT F++P +E
Sbjct: 44 FEELKLSQPTLKAIEKMGFTTMTSVQARTIPPLLAGRDVLGAAKTGSGKTLAFLIPAIEL 103
Query: 372 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 551
L KP G + ++++PTRELALQ REL +F T ++GG + Q+ +
Sbjct: 104 LHSLKFKPRNGTGI--IVITPTRELALQIFGVARELMEFHSQTFGIVIGGANRRQEAEKL 161
Query: 552 SGSSPDIVVATPGRFL-HICIEMSLKLDNIXIVVFDE 659
++++ATPGR L H+ N+ ++ DE
Sbjct: 162 M-KGVNMLIATPGRLLDHLQNTKGFVFKNLKALIIDE 197
>UniRef50_Q9RKJ0 Cluster: ATP-dependent RNA helicase; n=2;
Streptomyces|Rep: ATP-dependent RNA helicase -
Streptomyces coelicolor
Length = 740
Score = 104 bits (249), Expect = 2e-21
Identities = 62/156 (39%), Positives = 82/156 (52%)
Frame = +3
Query: 192 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 371
F +GL V++ + + G P PIQ TIP AL GKD++ RTGSGKT F LP L
Sbjct: 63 FADLGLPEGVVRKLAQNGVTTPFPIQAATIPDALAGKDILGRGRTGSGKTLSFGLPTLAT 122
Query: 372 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 551
L T RA+IL+PTRELA+Q ++ G GL + GG S+ Q +
Sbjct: 123 LA---GGRTEKHKPRAVILTPTRELAMQVADALQPYGDVLGLKMKVVCGGTSMGNQIYAL 179
Query: 552 SGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
D++VATPGR I + L+N+ I V DE
Sbjct: 180 E-RGVDVLVATPGRLRDIINRGACSLENVQIAVLDE 214
>UniRef50_Q5GRS8 Cluster: Superfamily II DNA/RNA helicase; n=4;
Wolbachia|Rep: Superfamily II DNA/RNA helicase -
Wolbachia sp. subsp. Brugia malayi (strain TRS)
Length = 408
Score = 104 bits (249), Expect = 2e-21
Identities = 61/158 (38%), Positives = 90/158 (56%), Gaps = 1/158 (0%)
Frame = +3
Query: 189 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILE 368
+F MGL + + + K + PTP+Q + IP+AL GKD++ A+TG+GKT F +P++
Sbjct: 3 SFYEMGLPLLLAQALDKNSFSVPTPVQAQAIPLALKGKDILGSAQTGTGKTLAFAIPLIA 62
Query: 369 KLLVPNNKPTPGKNLRALILSPTRELALQ-TLRFVRELGKFTGLTSAAILGGESIEQQFN 545
KLL N T AL++ PTRELA Q T + L K + L A ++GGE I +Q N
Sbjct: 63 KLLGEPNAST------ALVIVPTRELAQQVTNEIGKLLLKNSVLKIALLIGGEPIFRQLN 116
Query: 546 VMSGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
+ P IV+ TPGR + +L +N+ +V DE
Sbjct: 117 QLQ-RRPRIVIGTPGRIIDHIERKTLITNNVSTLVLDE 153
>UniRef50_Q28T45 Cluster: DEAD/DEAH box helicase-like protein; n=18;
Alphaproteobacteria|Rep: DEAD/DEAH box helicase-like
protein - Jannaschia sp. (strain CCS1)
Length = 644
Score = 104 bits (249), Expect = 2e-21
Identities = 60/156 (38%), Positives = 88/156 (56%)
Frame = +3
Query: 192 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 371
F + L+ V K I + GY+ PTPIQ IP AL G+DV+ +A+TG+GKTA F LP++
Sbjct: 13 FADLDLNPKVQKAIVEAGYESPTPIQAGAIPPALAGRDVLGIAQTGTGKTASFTLPMITM 72
Query: 372 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 551
L + + R+L+L PTRELA Q K LT A ++GG S ++Q +
Sbjct: 73 LARGRAR---ARMPRSLVLCPTRELAAQVAENFDIYAKHVKLTKALLIGGVSFKEQEQAI 129
Query: 552 SGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
D+++ATPGR L L L+++ ++V DE
Sbjct: 130 D-KGVDVLIATPGRLLDHFERGKLILNDVKVMVVDE 164
>UniRef50_Q4Q8D5 Cluster: ATP-dependent RNA helicase, putative; n=6;
Trypanosomatidae|Rep: ATP-dependent RNA helicase,
putative - Leishmania major
Length = 900
Score = 104 bits (249), Expect = 2e-21
Identities = 59/157 (37%), Positives = 93/157 (59%), Gaps = 1/157 (0%)
Frame = +3
Query: 192 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 371
F + +S G+ + Y TP+Q+ T+ +AL G DV+ A+TGSGKT CFV+P+LE+
Sbjct: 71 FTELPISQRTQMGLERGHYTILTPVQKGTLHLALAGLDVLGAAKTGSGKTLCFVIPVLER 130
Query: 372 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 551
L + + + AL+LSPTRELALQ + ++ +G L++A + GG ++++ +
Sbjct: 131 LY--RERWSSDMGVGALLLSPTRELALQIFKVMQLVGYKHVLSAALLTGGRDVQEERKRL 188
Query: 552 SGSSPDIVVATPGRFL-HICIEMSLKLDNIXIVVFDE 659
S I+V TPGR L H+ + L LDN+ + DE
Sbjct: 189 HAIS--IIVGTPGRVLHHLQDDAELVLDNLQLFCMDE 223
>UniRef50_Q7S5R1 Cluster: ATP-dependent RNA helicase dbp-3; n=10;
Pezizomycotina|Rep: ATP-dependent RNA helicase dbp-3 -
Neurospora crassa
Length = 614
Score = 104 bits (249), Expect = 2e-21
Identities = 60/146 (41%), Positives = 82/146 (56%), Gaps = 8/146 (5%)
Frame = +3
Query: 246 YKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEKLLVPNNKPTPGKNL---- 413
Y PTPIQ + P +L+G+DV+ +A TGSGKT F LP +E L ++P P N
Sbjct: 199 YTNPTPIQSASWPFSLSGRDVIGIAETGSGKTMAFSLPCVESLA---SRPKPKFNSRDRT 255
Query: 414 ---RALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM-SGSSPDIVVA 581
RA+I+SPTRELA+QT + L GL++ I GG +Q N++ + DI+ A
Sbjct: 256 AHPRAVIVSPTRELAMQTHAALSGLASLVGLSAVCIFGGSDKNEQRNLLYKNNGVDIITA 315
Query: 582 TPGRFLHICIEMSLKLDNIXIVVFDE 659
TPGR E S+ L N+ V DE
Sbjct: 316 TPGRLKDFLSEGSISLANVSFAVLDE 341
>UniRef50_UPI0000ECBDA5 Cluster: ATP-dependent RNA helicase DDX24
(EC 3.6.1.-) (DEAD box protein 24).; n=2; Gallus
gallus|Rep: ATP-dependent RNA helicase DDX24 (EC
3.6.1.-) (DEAD box protein 24). - Gallus gallus
Length = 625
Score = 103 bits (248), Expect = 3e-21
Identities = 60/159 (37%), Positives = 94/159 (59%), Gaps = 9/159 (5%)
Frame = +3
Query: 189 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGK-DVVAMARTGSGKTACFVLPIL 365
A++ + + PVLK ++ G+ PTPIQ T+P A+ D++ A TGSGKT F +P++
Sbjct: 83 AWKDLFVPQPVLKALSSLGFSAPTPIQALTLPSAIRDNMDILGAAETGSGKTLAFAIPMI 142
Query: 366 EKLLV---PNNKP-TPG----KNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGG 521
+L NNK T G + L L+L+PTRELA+Q + + KFTG+ +A ++GG
Sbjct: 143 HSVLEWQQSNNKEHTVGLHKKRPLLGLVLTPTRELAVQVKHHIDAVAKFTGIKTAILVGG 202
Query: 522 ESIEQQFNVMSGSSPDIVVATPGRFLHICIEMSLKLDNI 638
+ ++Q V++ P+IV+ATPGR + E L N+
Sbjct: 203 MAAQKQERVLN-RKPEIVIATPGRLWELIKERHPHLSNL 240
>UniRef50_Q6AMK6 Cluster: Probable ATP-dependent RNA helicase; n=1;
Desulfotalea psychrophila|Rep: Probable ATP-dependent
RNA helicase - Desulfotalea psychrophila
Length = 632
Score = 103 bits (248), Expect = 3e-21
Identities = 60/157 (38%), Positives = 85/157 (54%)
Frame = +3
Query: 189 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILE 368
+F L ++ + K G+ QPTPIQ K IP+ L G D++ A+TG+GKTA F LP+L
Sbjct: 56 SFTDFNLKSDLVANLVKLGFSQPTPIQEKAIPLLLAGSDLIGQAQTGTGKTAAFGLPLL- 114
Query: 369 KLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNV 548
NN K ++AL+L+PTRELA Q + G + GG S + Q
Sbjct: 115 -----NNIDFSKKCVQALVLAPTRELAQQVGDALATYSGDDGRNVLVVYGGSSYQAQVGG 169
Query: 549 MSGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
+ + +VV TPGR L + + SLKLD + +V DE
Sbjct: 170 LRRGA-RVVVGTPGRLLDLIRQGSLKLDQLKTLVLDE 205
>UniRef50_Q1U8H0 Cluster: Helicase-like:DEAD/DEAH box helicase-like;
n=2; Lactobacillus reuteri|Rep: Helicase-like:DEAD/DEAH
box helicase-like - Lactobacillus reuteri 100-23
Length = 433
Score = 103 bits (248), Expect = 3e-21
Identities = 57/139 (41%), Positives = 84/139 (60%), Gaps = 1/139 (0%)
Frame = +3
Query: 246 YKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALI 425
YKQPT IQ+ P T + V+ +A TGSGKT F LP+L K++ PG+ + L+
Sbjct: 13 YKQPTAIQKAVAPALKTDQSVLGIAPTGSGKTLAFTLPLLPKIM-------PGEGTQLLV 65
Query: 426 LSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVMS-GSSPDIVVATPGRFLH 602
L+P++ELA+QT + +RE G++ ++ GG ++ +Q VM+ PDIVV TPGR LH
Sbjct: 66 LAPSQELAIQTTKVIREWATLIGVSVQSLTGGANLRRQ--VMNLHQHPDIVVGTPGRVLH 123
Query: 603 ICIEMSLKLDNIXIVVFDE 659
+ LKL + +V DE
Sbjct: 124 MLDNHHLKLGYLMTMVIDE 142
>UniRef50_A4AFV6 Cluster: ATP-dependent RNA helicase; n=3;
Actinobacteria (class)|Rep: ATP-dependent RNA helicase -
marine actinobacterium PHSC20C1
Length = 757
Score = 103 bits (248), Expect = 3e-21
Identities = 57/159 (35%), Positives = 88/159 (55%), Gaps = 2/159 (1%)
Frame = +3
Query: 189 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILE 368
+F +G+ + + + G + P PIQ TIP L GKDV+ +TGSGKT F P++E
Sbjct: 373 SFLDLGIGSNISRQLASMGAESPFPIQAATIPDVLAGKDVLGRGKTGSGKTIAFGAPLVE 432
Query: 369 KLLVPN--NKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQF 542
+L+ N G+ RALIL+PTRELA Q R ++ + + GL + I+GG +Q
Sbjct: 433 RLMENNGGKDRQMGRKPRALILAPTRELAQQIDRTIQPIARSVGLFTTTIVGGVPQYKQV 492
Query: 543 NVMSGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
++ D+++ATPGR + + L L + + V DE
Sbjct: 493 AALT-RGVDVIIATPGRVEDLIEQGRLDLSQVKVTVLDE 530
>UniRef50_A3I1F5 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Algoriphagus sp. PR1|Rep: DEAD/DEAH box helicase-like
protein - Algoriphagus sp. PR1
Length = 399
Score = 103 bits (248), Expect = 3e-21
Identities = 59/160 (36%), Positives = 93/160 (58%)
Frame = +3
Query: 180 SSGAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLP 359
S +F S+ L +++ ++++GY+ T IQ ++I L G+D++ ++ TGSGKT F++P
Sbjct: 53 SKTSFASLSLDSVMMRNLSEKGYENMTNIQEQSIEALLEGRDLLGISNTGSGKTGAFLIP 112
Query: 360 ILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQ 539
I+E L PG+ ALI++PTRELALQ + + L K L SA +GG +I
Sbjct: 113 IIEHAL-----KNPGQ-FTALIVTPTRELALQIDQEFKSLSKGMRLHSATFIGGTNINTD 166
Query: 540 FNVMSGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
V+S ++V TPGR L + LKL+ + +V DE
Sbjct: 167 MKVLS-RKLHVIVGTPGRLLDLTNRKLLKLNQVKTLVLDE 205
>UniRef50_A5DUB2 Cluster: ATP-dependent RNA helicase MAK5; n=5;
Saccharomycetales|Rep: ATP-dependent RNA helicase MAK5 -
Lodderomyces elongisporus (Yeast) (Saccharomyces
elongisporus)
Length = 855
Score = 103 bits (248), Expect = 3e-21
Identities = 64/165 (38%), Positives = 99/165 (60%), Gaps = 14/165 (8%)
Frame = +3
Query: 207 LSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEKLLVPN 386
LS +L G++ + PTPIQ++TIP+AL GKDV+ A TGSGKT + +PILEK +
Sbjct: 226 LSPYILNGLSNMKFTTPTPIQKRTIPLALEGKDVIGKATTGSGKTLAYGIPILEKYI--Q 283
Query: 387 NKPTPGKNLR--------ALILSPTRELALQTLRFVRELGKFTGLTSAAIL---GGESIE 533
+ T + +R +I +PTRELA Q + + ++ +++ L++ I+ GG SI+
Sbjct: 284 SLDTVKRKVREKVVNHPTGIIFAPTRELAHQVVDHLNKIAQYSPLSTKGIVSVTGGLSIQ 343
Query: 534 QQFNVMSGSSPDIVVATPGRFLHIC---IEMSLKLDNIXIVVFDE 659
+Q ++S P I+VATPGR L +C E+ +L I+V DE
Sbjct: 344 KQERLLS-FGPGIIVATPGRMLELCQNDQELVKRLSMTDIIVLDE 387
>UniRef50_Q5T1V6 Cluster: Probable ATP-dependent RNA helicase DDX59;
n=34; Euteleostomi|Rep: Probable ATP-dependent RNA
helicase DDX59 - Homo sapiens (Human)
Length = 619
Score = 103 bits (248), Expect = 3e-21
Identities = 60/157 (38%), Positives = 91/157 (57%), Gaps = 1/157 (0%)
Frame = +3
Query: 192 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 371
F+ L + + K GY+ PTPIQ + IP+ L G+D++A A TGSGKTA F+LP++ +
Sbjct: 205 FEHCSLPEVLNHNLKKSGYEVPTPIQMQMIPVGLLGRDILASADTGSGKTAAFLLPVIMR 264
Query: 372 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVREL-GKFTGLTSAAILGGESIEQQFNV 548
L + P+ ALIL+PTRELA+Q R +EL + + ++GG + Q
Sbjct: 265 ALFESKTPS------ALILTPTRELAIQIERQAKELMSGLPRMKTVLLVGGLPLPPQLYR 318
Query: 549 MSGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
+ +++ATPGR L I + S++L + IVV DE
Sbjct: 319 LQ-QHVKVIIATPGRLLDIIKQSSVELCGVKIVVVDE 354
>UniRef50_UPI0000499ECF Cluster: DEAD/DEAH box helicase; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 542
Score = 103 bits (247), Expect = 4e-21
Identities = 61/157 (38%), Positives = 92/157 (58%), Gaps = 1/157 (0%)
Frame = +3
Query: 192 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 371
++S+ LS + K + + GY + T IQ ++IP+ L GKD++A ARTGSGKT F++PI+E
Sbjct: 83 YKSLNLSEEIQKALEEAGYTKMTTIQARSIPLLLMGKDIMAKARTGSGKTLAFLIPIVEI 142
Query: 372 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 551
L + + G A+I+SPTRELA+QT + ++ + T I+GG S +++ +
Sbjct: 143 LNKIHFQTRNGTG--AIIISPTRELAIQTFDVLEKILAHSERTRTLIIGGSSKKKEEEAL 200
Query: 552 SGSSPDIVVATPGRFL-HICIEMSLKLDNIXIVVFDE 659
IVVATPGR L HI N+ +V DE
Sbjct: 201 K-KGASIVVATPGRLLDHIINTKCFIYRNLKCLVIDE 236
>UniRef50_Q8F0Q7 Cluster: ATP-dependent RNA helicase; n=4;
Leptospira|Rep: ATP-dependent RNA helicase - Leptospira
interrogans
Length = 540
Score = 103 bits (247), Expect = 4e-21
Identities = 57/158 (36%), Positives = 92/158 (58%), Gaps = 2/158 (1%)
Frame = +3
Query: 192 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 371
F+ + + +L I + GY + TPIQ K+IP L GKD+ +A+TG+GKT F++P++
Sbjct: 3 FEELSIHPKLLSAIQEIGYTELTPIQEKSIPHGLEGKDITGLAQTGTGKTVAFLIPVIHN 62
Query: 372 LLVPNNKPTPG-KNLRALILSPTRELALQTLRFVRELGKFT-GLTSAAILGGESIEQQFN 545
+L T G + + AL+L+PTREL +Q ++L K + G+ S I+GG + Q
Sbjct: 63 IL------TKGIQGIAALVLAPTRELTMQIAEEAKKLLKHSEGIRSVPIIGGTDYKSQNK 116
Query: 546 VMSGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
+ G + I+VATPGR + + S+ + N+ V DE
Sbjct: 117 DLEGLN-GIIVATPGRLIDMIKSGSIDISNVEFFVLDE 153
>UniRef50_Q6F0U0 Cluster: ATP-dependent RNA helicase; n=1;
Mesoplasma florum|Rep: ATP-dependent RNA helicase -
Mesoplasma florum (Acholeplasma florum)
Length = 666
Score = 103 bits (247), Expect = 4e-21
Identities = 60/157 (38%), Positives = 91/157 (57%), Gaps = 1/157 (0%)
Frame = +3
Query: 192 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 371
F+ + LS VL + K + + T IQ + IP+ L GK++ + TG+GKTA FVLPILEK
Sbjct: 3 FKELQLSDKVLVALEKANFNEATEIQARAIPLFLEGKNIFGKSSTGTGKTASFVLPILEK 62
Query: 372 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELG-KFTGLTSAAILGGESIEQQFNV 548
+ PN + ++A+I++PTRELA+Q + +R G + L A ++GG + Q
Sbjct: 63 -IEPNK-----RRVQAVIMAPTRELAMQIVNQIRIFGSRIENLVIAPLIGGADMRDQIKR 116
Query: 549 MSGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
+ S IVV TPGR +LKLD++ ++ DE
Sbjct: 117 LKDS--QIVVGTPGRVNDHLNRKTLKLDDVRTIILDE 151
>UniRef50_Q6D2K3 Cluster: ATP-independent RNA helicase; n=6;
Proteobacteria|Rep: ATP-independent RNA helicase -
Erwinia carotovora subsp. atroseptica (Pectobacterium
atrosepticum)
Length = 460
Score = 103 bits (247), Expect = 4e-21
Identities = 60/161 (37%), Positives = 94/161 (58%), Gaps = 1/161 (0%)
Frame = +3
Query: 180 SSGAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLP 359
S+ +F S+ L L + + GY + TP+Q T+P L+G DV A A+TGSGKTA F +
Sbjct: 2 STTSFSSLALPAEQLSNLNELGYTEMTPVQAATLPAVLSGADVRAKAKTGSGKTAAFGIG 61
Query: 360 ILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFT-GLTSAAILGGESIEQ 536
+L++++V + +AL+L PTRELA Q + +R L +F + + GG+ + Q
Sbjct: 62 LLDRIVVSD------FTTQALVLCPTRELADQVSKELRRLARFAQNIKILTLCGGQPMGQ 115
Query: 537 QFNVMSGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
Q + + +P IVV TPGR + SL LD++ ++V DE
Sbjct: 116 QLDSLV-HAPHIVVGTPGRIQDHLRKQSLALDSLKVLVLDE 155
>UniRef50_A7P8T9 Cluster: Chromosome chr3 scaffold_8, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr3 scaffold_8, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 971
Score = 103 bits (247), Expect = 4e-21
Identities = 53/151 (35%), Positives = 86/151 (56%), Gaps = 1/151 (0%)
Frame = +3
Query: 204 GLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEKLLVP 383
GL+ +L I K Y++P PIQ + +PI ++G+D + +A+TGSGKT FVLP+L +
Sbjct: 490 GLTTKILDTIKKLNYERPMPIQAQALPIIMSGRDCIGIAKTGSGKTLAFVLPMLRH--IK 547
Query: 384 NNKPT-PGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVMSGS 560
+ P PG LI++PTREL Q +++ K G++ + GG + QQ + +
Sbjct: 548 DQPPVMPGDGPIGLIMAPTRELVQQIHSDIKKFAKVVGISCVPVYGGSGVAQQISELKRG 607
Query: 561 SPDIVVATPGRFLHICIEMSLKLDNIXIVVF 653
+ ++VV TPGR + I K+ N+ V +
Sbjct: 608 A-EVVVCTPGRMIDILCTSGGKITNLRRVTY 637
>UniRef50_A4UCU0 Cluster: DEAD box polypeptide 47 isoform 1 variant;
n=9; Coelomata|Rep: DEAD box polypeptide 47 isoform 1
variant - Homo sapiens (Human)
Length = 182
Score = 103 bits (247), Expect = 4e-21
Identities = 62/158 (39%), Positives = 92/158 (58%), Gaps = 2/158 (1%)
Frame = +3
Query: 192 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 371
F+ +G++ + + + G+ +PT IQ + IP+AL G+D++ +A TGSGKT F LPIL
Sbjct: 15 FKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFALPILNA 74
Query: 372 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGG-ESIEQQFNV 548
LL TP + L AL+L+PTRELA Q LG G+ SA I+GG +S+ Q ++
Sbjct: 75 LL-----ETP-QRLFALVLTPTRELAFQISEQFEALGSSIGVQSAVIVGGIDSMSQ--SL 126
Query: 549 MSGSSPDIVVATPGRFL-HICIEMSLKLDNIXIVVFDE 659
P I++ATPGR + H+ L + +V DE
Sbjct: 127 ALAKKPHIIIATPGRLIDHLENTKGFNLRALKYLVMDE 164
>UniRef50_Q2GSC7 Cluster: Putative uncharacterized protein; n=6;
Pezizomycotina|Rep: Putative uncharacterized protein -
Chaetomium globosum (Soil fungus)
Length = 1029
Score = 103 bits (247), Expect = 4e-21
Identities = 57/158 (36%), Positives = 86/158 (54%), Gaps = 1/158 (0%)
Frame = +3
Query: 189 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILE 368
+F +GL +++ + K+ +++PT +QRK IP+AL G+DV+ A+TGSGKTA +VLP+L
Sbjct: 307 SFAELGLDPRLVQAVAKQSFEKPTLVQRKAIPLALQGQDVLCKAKTGSGKTAAYVLPVLS 366
Query: 369 KLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQF-N 545
+L P LIL PTRELA Q + + + F A E++
Sbjct: 367 AIL-KRKSTDPAPFTAGLILVPTRELADQVFKAIEQFSAFCAKDIHAAKLTENVSDAVQR 425
Query: 546 VMSGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
+ + PDIVV+TP R H +L L + +V DE
Sbjct: 426 SLLANVPDIVVSTPARAWHSVNSSALSLSQLQYLVLDE 463
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 593,585,088
Number of Sequences: 1657284
Number of extensions: 11379082
Number of successful extensions: 33447
Number of sequences better than 10.0: 500
Number of HSP's better than 10.0 without gapping: 30841
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31881
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 50000004659
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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