Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc29e05
(661 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 184 4e-47
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 184 4e-47
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 127 8e-30
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 119 2e-27
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 107 7e-24
AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved ger... 102 2e-22
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 100 1e-21
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 100 1e-21
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 100 1e-21
Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 99 1e-21
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 98 4e-21
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 98 4e-21
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 98 4e-21
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 97 7e-21
AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical ... 97 7e-21
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 97 7e-21
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 97 7e-21
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 97 7e-21
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 97 1e-20
AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical... 97 1e-20
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 97 1e-20
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 95 3e-20
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 94 9e-20
Z54327-7|CAD57690.1| 268|Caenorhabditis elegans Hypothetical pr... 92 4e-19
Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical pr... 92 4e-19
U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA he... 92 4e-19
Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.ele... 89 2e-18
U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation fact... 89 2e-18
AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 89 2e-18
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 89 3e-18
AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 89 3e-18
AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 89 3e-18
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 88 5e-18
U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical pr... 87 1e-17
EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein. 82 4e-16
CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical ... 82 4e-16
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 81 5e-16
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 80 1e-15
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 80 1e-15
AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical ... 80 1e-15
Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical pr... 79 2e-15
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 76 3e-14
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 75 6e-14
Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical pr... 72 4e-13
L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical pr... 62 3e-10
Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical pr... 58 6e-09
Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical pr... 58 6e-09
Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical pr... 58 6e-09
U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical p... 51 6e-07
AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical... 47 1e-05
AF480439-1|AAM76083.1| 1037|Caenorhabditis elegans dicer-related... 46 3e-05
AF036696-4|AAB88350.1| 1037|Caenorhabditis elegans Dicer related... 46 3e-05
U00052-13|AAW88393.1| 608|Caenorhabditis elegans Hypothetical p... 35 0.059
U00052-12|AAK21428.2| 631|Caenorhabditis elegans Hypothetical p... 35 0.059
AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical ... 33 0.14
Z79752-5|CAB02082.3| 1119|Caenorhabditis elegans Hypothetical pr... 33 0.18
Z83123-10|CAB05609.2| 988|Caenorhabditis elegans Hypothetical p... 32 0.31
AY095296-1|AAM26298.1| 988|Caenorhabditis elegans RecQ helicase... 32 0.31
L14331-9|AAA28101.2| 1845|Caenorhabditis elegans Dicer related p... 29 2.2
U40417-6|AAA81415.2| 90|Caenorhabditis elegans Saposin-like pr... 29 3.9
U29097-2|AAA68410.2| 1056|Caenorhabditis elegans Human wrn (wern... 29 3.9
Z72502-1|CAA96585.2| 430|Caenorhabditis elegans Hypothetical pr... 28 5.1
U39472-8|AAP86618.1| 338|Caenorhabditis elegans Serpentine rece... 28 5.1
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 184 bits (449), Expect = 4e-47
Identities = 90/159 (56%), Positives = 120/159 (75%)
Frame = +3
Query: 183 SGAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPI 362
+G +Q +GL V K I K+G+ QPTPIQRKTIP + GKDVVAM+RTGSGKTA FV+P+
Sbjct: 23 AGGWQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVAMSRTGSGKTAAFVIPM 82
Query: 363 LEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQF 542
L+KL + T G +RAL++SPTRELALQT + V+ELG+FTGL A ++GG+ IE+QF
Sbjct: 83 LQKL---KRRDTTG--IRALMVSPTRELALQTFKVVKELGRFTGLRCACLVGGDQIEEQF 137
Query: 543 NVMSGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
+ + +PDI++ATPGR LH+ +EM L+L + VVFDE
Sbjct: 138 STIH-ENPDILLATPGRLLHVIVEMDLRLSYVQYVVFDE 175
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 184 bits (449), Expect = 4e-47
Identities = 90/159 (56%), Positives = 120/159 (75%)
Frame = +3
Query: 183 SGAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPI 362
+G +Q +GL V K I K+G+ QPTPIQRKTIP + GKDVVAM+RTGSGKTA FV+P+
Sbjct: 23 AGGWQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVAMSRTGSGKTAAFVIPM 82
Query: 363 LEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQF 542
L+KL + T G +RAL++SPTRELALQT + V+ELG+FTGL A ++GG+ IE+QF
Sbjct: 83 LQKL---KRRDTTG--IRALMVSPTRELALQTFKVVKELGRFTGLRCACLVGGDQIEEQF 137
Query: 543 NVMSGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
+ + +PDI++ATPGR LH+ +EM L+L + VVFDE
Sbjct: 138 STIH-ENPDILLATPGRLLHVIVEMDLRLSYVQYVVFDE 175
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 127 bits (306), Expect = 8e-30
Identities = 69/153 (45%), Positives = 92/153 (60%), Gaps = 1/153 (0%)
Frame = +3
Query: 189 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILE 368
+F+ M LS +LK + GY PTPIQ+ IP+ALTGKD+ A A TG+GKTA FVLPILE
Sbjct: 149 SFEQMNLSRQILKACSGAGYSDPTPIQQACIPVALTGKDICACAATGTGKTAAFVLPILE 208
Query: 369 KLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNV 548
+++ +P R L+L PTRELA+Q + R+L F L GG ++ Q
Sbjct: 209 RMIY---RPKGASCTRVLVLVPTRELAIQVFQVFRKLSTFIQLEVCLCAGGLDLKAQEAA 265
Query: 549 MSGSSPDIVVATPGRFL-HICIEMSLKLDNIXI 644
+ S PD+VVATPGR + H+ S L NI +
Sbjct: 266 LR-SGPDVVVATPGRLIDHLHNSPSFNLSNIEV 297
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 119 bits (286), Expect = 2e-27
Identities = 66/157 (42%), Positives = 93/157 (59%), Gaps = 1/157 (0%)
Frame = +3
Query: 192 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 371
F+ LS+ L+G+ Y +PT IQR TI +LTG DVV A+TGSGKT V+P+LE
Sbjct: 78 FEDFPLSWRTLEGLKDNDYTKPTEIQRDTIAYSLTGSDVVGAAKTGSGKTLALVIPVLEA 137
Query: 372 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 551
L K +P L ALI+SPTRELALQT + +G G + ++GG + + N +
Sbjct: 138 LW--RAKWSPDYGLGALIISPTRELALQTFSTINAVGAHHGFSCGLVIGGSDVAFERNRI 195
Query: 552 SGSSPDIVVATPGRFL-HICIEMSLKLDNIXIVVFDE 659
SG +I+V TPGR L H+ + D++ ++V DE
Sbjct: 196 SGI--NIIVCTPGRLLQHMDENAQMSCDSLQVLVLDE 230
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 107 bits (257), Expect = 7e-24
Identities = 59/159 (37%), Positives = 92/159 (57%), Gaps = 3/159 (1%)
Frame = +3
Query: 192 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 371
++ G V + + + GY +PTPIQR+ IPI L +DV+ +A TGSGKTA F+LP+L
Sbjct: 303 WEEAGFPDEVYQAVKEIGYLEPTPIQRQAIPIGLQNRDVIGVAETGSGKTAAFLLPLLVW 362
Query: 372 LL-VPNNKPTPGKNL--RALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQF 542
+ +P + ++L A+I++PTRELA Q + GK G+ + +++GG S E Q
Sbjct: 363 ITSLPKMERQEHRDLGPYAIIMAPTRELAQQIEEETNKFGKLLGIKTVSVIGGASREDQ- 421
Query: 543 NVMSGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
+ ++V+ATPGR L + L L+ V+ DE
Sbjct: 422 GMKLRMGVEVVIATPGRLLDVLENRYLLLNQCTYVILDE 460
>AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved
germline helicase protein1 protein.
Length = 430
Score = 102 bits (245), Expect = 2e-22
Identities = 55/156 (35%), Positives = 94/156 (60%)
Frame = +3
Query: 192 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 371
F+ L +L GI ++G+++P+PIQ +I +ALTG+D++A A+ G+GKT + +P++EK
Sbjct: 45 FEDFCLGRDLLMGIFEKGWEKPSPIQEASIGVALTGQDILARAKNGTGKTGAYCIPVIEK 104
Query: 372 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 551
+ +P K ++A+++ PTRELALQT + EL K L GG + +
Sbjct: 105 I-----QPAL-KAIQAMVIVPTRELALQTSQICVELSKHIQLKVMVTTGGTDLRDDIMRL 158
Query: 552 SGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
+G + +V+ATPGR L + + K+++ +V DE
Sbjct: 159 NG-TVHLVIATPGRILDLMEKGVAKMEHCKTLVLDE 193
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 100 bits (239), Expect = 1e-21
Identities = 59/160 (36%), Positives = 88/160 (55%), Gaps = 4/160 (2%)
Frame = +3
Query: 192 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 371
F L+ + K + GY + TPIQ+ +P+ G D++A A+TGSGKTA F+LPI+ +
Sbjct: 343 FAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLPIMTR 402
Query: 372 LLVPNNKPTPGKN---LRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESI-EQQ 539
L+ NN T G+ R +IL+PTRELA Q R+ T + + GG ++ +
Sbjct: 403 LIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKFAYQTMMEIKPVYGGLAVGYNK 462
Query: 540 FNVMSGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
+ G++ I+V T GR H C E ++KLD V DE
Sbjct: 463 GQIEKGAT--IIVGTVGRIKHFCEEGTIKLDKCRFFVLDE 500
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 100 bits (239), Expect = 1e-21
Identities = 59/160 (36%), Positives = 88/160 (55%), Gaps = 4/160 (2%)
Frame = +3
Query: 192 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 371
F L+ + K + GY + TPIQ+ +P+ G D++A A+TGSGKTA F+LPI+ +
Sbjct: 343 FAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLPIMTR 402
Query: 372 LLVPNNKPTPGKN---LRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESI-EQQ 539
L+ NN T G+ R +IL+PTRELA Q R+ T + + GG ++ +
Sbjct: 403 LIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKFAYQTMMEIKPVYGGLAVGYNK 462
Query: 540 FNVMSGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
+ G++ I+V T GR H C E ++KLD V DE
Sbjct: 463 GQIEKGAT--IIVGTVGRIKHFCEEGTIKLDKCRFFVLDE 500
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 100 bits (239), Expect = 1e-21
Identities = 59/160 (36%), Positives = 88/160 (55%), Gaps = 4/160 (2%)
Frame = +3
Query: 192 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 371
F L+ + K + GY + TPIQ+ +P+ G D++A A+TGSGKTA F+LPI+ +
Sbjct: 343 FAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLPIMTR 402
Query: 372 LLVPNNKPTPGKN---LRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESI-EQQ 539
L+ NN T G+ R +IL+PTRELA Q R+ T + + GG ++ +
Sbjct: 403 LIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKFAYQTMMEIKPVYGGLAVGYNK 462
Query: 540 FNVMSGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
+ G++ I+V T GR H C E ++KLD V DE
Sbjct: 463 GQIEKGAT--IIVGTVGRIKHFCEEGTIKLDKCRFFVLDE 500
>Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical
protein T26G10.1 protein.
Length = 489
Score = 99 bits (238), Expect = 1e-21
Identities = 58/158 (36%), Positives = 89/158 (56%), Gaps = 1/158 (0%)
Frame = +3
Query: 189 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILE 368
+F +G+S P+ + G+ +P+ IQ+ +P AL GKDV+ +A TGSGKT F +P+L+
Sbjct: 45 SFAELGVSQPLCDACQRLGWMKPSKIQQAALPHALQGKDVIGLAETGSGKTGAFAIPVLQ 104
Query: 369 KLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNV 548
LL + P + L+L+PTRELA Q + LG GL +A I+GG + Q
Sbjct: 105 SLL---DHP---QAFFCLVLTPTRELAFQIGQQFEALGSGIGLIAAVIVGGVDMAAQAMA 158
Query: 549 MSGSSPDIVVATPGRFL-HICIEMSLKLDNIXIVVFDE 659
++ P I+VATPGR + H+ L + ++ DE
Sbjct: 159 LA-RRPHIIVATPGRLVDHLENTKGFNLKALKFLIMDE 195
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 98.3 bits (234), Expect = 4e-21
Identities = 58/160 (36%), Positives = 87/160 (54%), Gaps = 4/160 (2%)
Frame = +3
Query: 192 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 371
F L + K + GY + TPIQ+ T+P+ G D++A A+TGSGKTA F+LPI+ +
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIMAR 613
Query: 372 LLVPNNKPTPGKN---LRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESI-EQQ 539
L+ N+ T G+ R +IL+PTREL Q R+ T + + GG ++ +
Sbjct: 614 LIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKFAYQTMMEIRPVYGGLAVGYNK 673
Query: 540 FNVMSGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
+ G++ I+V T GR H C E ++KLD V DE
Sbjct: 674 GQIEKGAT--IIVGTVGRIKHFCEEGTIKLDKCRFFVLDE 711
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 98.3 bits (234), Expect = 4e-21
Identities = 58/160 (36%), Positives = 87/160 (54%), Gaps = 4/160 (2%)
Frame = +3
Query: 192 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 371
F L + K + GY + TPIQ+ T+P+ G D++A A+TGSGKTA F+LPI+ +
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIMAR 613
Query: 372 LLVPNNKPTPGKN---LRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESI-EQQ 539
L+ N+ T G+ R +IL+PTREL Q R+ T + + GG ++ +
Sbjct: 614 LIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKFAYQTMMEIRPVYGGLAVGYNK 673
Query: 540 FNVMSGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
+ G++ I+V T GR H C E ++KLD V DE
Sbjct: 674 GQIEKGAT--IIVGTVGRIKHFCEEGTIKLDKCRFFVLDE 711
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 98.3 bits (234), Expect = 4e-21
Identities = 58/160 (36%), Positives = 87/160 (54%), Gaps = 4/160 (2%)
Frame = +3
Query: 192 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 371
F L + K + GY + TPIQ+ T+P+ G D++A A+TGSGKTA F+LPI+ +
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIMAR 613
Query: 372 LLVPNNKPTPGKN---LRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESI-EQQ 539
L+ N+ T G+ R +IL+PTREL Q R+ T + + GG ++ +
Sbjct: 614 LIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKFAYQTMMEIRPVYGGLAVGYNK 673
Query: 540 FNVMSGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
+ G++ I+V T GR H C E ++KLD V DE
Sbjct: 674 GQIEKGAT--IIVGTVGRIKHFCEEGTIKLDKCRFFVLDE 711
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 97.5 bits (232), Expect = 7e-21
Identities = 54/150 (36%), Positives = 85/150 (56%)
Frame = +3
Query: 204 GLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEKLLVP 383
G++ ++ + K Y +PT IQ + IP ++G+DV+ +A+TGSGKT F+LP+ +L
Sbjct: 310 GVNLKMMNVLKKFEYSKPTSIQAQAIPSIMSGRDVIGIAKTGSGKTLAFLLPMFRHIL-D 368
Query: 384 NNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVMSGSS 563
+ G A+IL+PTRELA+QT + + K GL A GG I +Q + +
Sbjct: 369 QPELEEGDGPIAVILAPTRELAMQTYKEANKFAKPLGLKVACTYGGVGISEQIADLKRGA 428
Query: 564 PDIVVATPGRFLHICIEMSLKLDNIXIVVF 653
+IVV TPGR + + S K+ N+ V +
Sbjct: 429 -EIVVCTPGRMIDVLAANSGKVTNLRRVTY 457
>AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical
protein Y65B4A.6 protein.
Length = 399
Score = 97.5 bits (232), Expect = 7e-21
Identities = 55/156 (35%), Positives = 88/156 (56%)
Frame = +3
Query: 192 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 371
F MGL +L+GI G+++P+ IQ++ IP L +DV+A A++G+GKTA F + +L+
Sbjct: 28 FDKMGLREDLLRGIYAYGFEKPSAIQQRAIPAILKARDVIAQAQSGTGKTATFSISVLQS 87
Query: 372 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 551
L T + +ALILSPTRELA+Q + V LG + + A +GG ++ + +
Sbjct: 88 L------DTQVRETQALILSPTRELAVQIQKVVLALGDYMNVQCHACIGGTNLGEDIRKL 141
Query: 552 SGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
+V TPGR + +L+ I ++V DE
Sbjct: 142 D-YGQHVVSGTPGRVFDMIRRRNLRTRAIKLLVLDE 176
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 97.5 bits (232), Expect = 7e-21
Identities = 59/166 (35%), Positives = 94/166 (56%), Gaps = 10/166 (6%)
Frame = +3
Query: 192 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 371
F G V++ + + GY +PTP+Q+ +IP L +D+++ A+TGSGKTA F+LPI++
Sbjct: 141 FNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCAQTGSGKTAAFLLPIIQH 200
Query: 372 LLV--PNN-KPTPGKNLR------ALILSPTRELALQTLRFVRELGKFTGLTSAAILGG- 521
+L P+ KP N R AL+LSPTRELA+Q + + + + +A + GG
Sbjct: 201 ILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIHKEATKFSYKSNIQTAILYGGR 260
Query: 522 ESIEQQFNVMSGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
E+ Q N + + I++ATPGR + I + + L +V DE
Sbjct: 261 ENYRDQVNRLRAGT-HILIATPGRLIDIIEQGFIGLAGCRYLVLDE 305
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 97.5 bits (232), Expect = 7e-21
Identities = 59/166 (35%), Positives = 94/166 (56%), Gaps = 10/166 (6%)
Frame = +3
Query: 192 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 371
F G V++ + + GY +PTP+Q+ +IP L +D+++ A+TGSGKTA F+LPI++
Sbjct: 125 FNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCAQTGSGKTAAFLLPIIQH 184
Query: 372 LLV--PNN-KPTPGKNLR------ALILSPTRELALQTLRFVRELGKFTGLTSAAILGG- 521
+L P+ KP N R AL+LSPTRELA+Q + + + + +A + GG
Sbjct: 185 ILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIHKEATKFSYKSNIQTAILYGGR 244
Query: 522 ESIEQQFNVMSGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
E+ Q N + + I++ATPGR + I + + L +V DE
Sbjct: 245 ENYRDQVNRLRAGT-HILIATPGRLIDIIEQGFIGLAGCRYLVLDE 289
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 97.5 bits (232), Expect = 7e-21
Identities = 59/166 (35%), Positives = 94/166 (56%), Gaps = 10/166 (6%)
Frame = +3
Query: 192 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 371
F G V++ + + GY +PTP+Q+ +IP L +D+++ A+TGSGKTA F+LPI++
Sbjct: 122 FNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCAQTGSGKTAAFLLPIIQH 181
Query: 372 LLV--PNN-KPTPGKNLR------ALILSPTRELALQTLRFVRELGKFTGLTSAAILGG- 521
+L P+ KP N R AL+LSPTRELA+Q + + + + +A + GG
Sbjct: 182 ILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIHKEATKFSYKSNIQTAILYGGR 241
Query: 522 ESIEQQFNVMSGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
E+ Q N + + I++ATPGR + I + + L +V DE
Sbjct: 242 ENYRDQVNRLRAGT-HILIATPGRLIDIIEQGFIGLAGCRYLVLDE 286
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 97.1 bits (231), Expect = 1e-20
Identities = 56/161 (34%), Positives = 90/161 (55%), Gaps = 4/161 (2%)
Frame = +3
Query: 189 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILE 368
+F + + + + + GY + TPIQ+ T+P+ GKD++A A+TGSGKTA F+LPI+
Sbjct: 299 SFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILACAQTGSGKTAAFLLPIMS 358
Query: 369 KLLVP---NNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESI-EQ 536
+L++ N G R +IL+PTRELA Q R+ + + + GG ++
Sbjct: 359 RLILEKDLNYGAEGGCYPRCIILTPTRELADQIYNEGRKFSYQSVMEIKPVYGGINVGYN 418
Query: 537 QFNVMSGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
+ +M G + I+V T GR H C + ++KLD +V DE
Sbjct: 419 KSQIMKGCT--IIVGTIGRVKHFCEDGAIKLDKCRYLVLDE 457
>AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical
protein F33D11.10 protein.
Length = 399
Score = 97.1 bits (231), Expect = 1e-20
Identities = 54/156 (34%), Positives = 88/156 (56%)
Frame = +3
Query: 192 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 371
F MGL +L+GI G+++P+ IQ++ +P L +DV+A A++G+GKTA F + +L+
Sbjct: 28 FDKMGLREDLLRGIYAYGFEKPSAIQQRAVPAILKARDVIAQAQSGTGKTATFSISVLQS 87
Query: 372 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 551
L T + +ALILSPTRELA+Q + V LG + + A +GG ++ + +
Sbjct: 88 L------DTQVRETQALILSPTRELAVQIQKVVLALGDYMNVQCHACIGGTNLGEDIRKL 141
Query: 552 SGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
+V TPGR + +L+ I ++V DE
Sbjct: 142 D-YGQHVVSGTPGRVFDMIRRRNLRTRAIKLLVLDE 176
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 97.1 bits (231), Expect = 1e-20
Identities = 56/161 (34%), Positives = 90/161 (55%), Gaps = 4/161 (2%)
Frame = +3
Query: 189 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILE 368
+F + + + + + GY + TPIQ+ T+P+ GKD++A A+TGSGKTA F+LPI+
Sbjct: 299 SFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILACAQTGSGKTAAFLLPIMS 358
Query: 369 KLLVP---NNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESI-EQ 536
+L++ N G R +IL+PTRELA Q R+ + + + GG ++
Sbjct: 359 RLILEKDLNYGAEGGCYPRCIILTPTRELADQIYNEGRKFSYQSVMEIKPVYGGINVGYN 418
Query: 537 QFNVMSGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
+ +M G + I+V T GR H C + ++KLD +V DE
Sbjct: 419 KSQIMKGCT--IIVGTIGRVKHFCEDGAIKLDKCRYLVLDE 457
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 95.5 bits (227), Expect = 3e-20
Identities = 53/148 (35%), Positives = 84/148 (56%), Gaps = 1/148 (0%)
Frame = +3
Query: 219 VLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEKLL-VPNNKP 395
+++ I K Y+QPTPIQ IP AL+G+DV+ +A+TGSGKTA ++ P + ++ P+ K
Sbjct: 276 LMEAIRKSEYEQPTPIQAMAIPSALSGRDVLGIAKTGSGKTAAYLWPAIVHIMDQPDLK- 334
Query: 396 TPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVMSGSSPDIV 575
G+ A+I+ PTRELA+Q + ++ K + GG S +Q N + ++V
Sbjct: 335 -AGEGPVAVIVVPTRELAIQVFQEAKKFCKVYNINPICAYGGGSKWEQSNELQNEGAEMV 393
Query: 576 VATPGRFLHICIEMSLKLDNIXIVVFDE 659
V TPGR + + + +VFDE
Sbjct: 394 VCTPGRIIDLVKMGATNFLRTTFLVFDE 421
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 93.9 bits (223), Expect = 9e-20
Identities = 52/131 (39%), Positives = 81/131 (61%), Gaps = 6/131 (4%)
Frame = +3
Query: 219 VLKGITKRGYKQPTPIQRKTIPIALTGK-DVVAMARTGSGKTACFVLPILEKLLVPNN-- 389
VL+ I + G+ +PT IQ +P A+ + DV+ A TGSGKT F +P++ +LL ++
Sbjct: 166 VLEAIEQMGFSEPTEIQSAVLPAAVRDRQDVLGAAETGSGKTLAFGIPLVARLLESSDDS 225
Query: 390 ---KPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVMSGS 560
+ T + RALI++PTREL +Q ++ + L T L + +I+GG + +Q ++S
Sbjct: 226 QETESTEVRGPRALIVAPTRELVIQIMKHINALISTTQLIATSIVGGLAQVKQERIISQQ 285
Query: 561 SPDIVVATPGR 593
PDIVVATPGR
Sbjct: 286 RPDIVVATPGR 296
>Z54327-7|CAD57690.1| 268|Caenorhabditis elegans Hypothetical
protein C26D10.2b protein.
Length = 268
Score = 91.9 bits (218), Expect = 4e-19
Identities = 55/160 (34%), Positives = 84/160 (52%), Gaps = 1/160 (0%)
Frame = +3
Query: 183 SGAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPI 362
S F+ L +L+ I G++ P+ +Q + IP A+ G DVV A++G GKTA FV+
Sbjct: 40 SSGFRDFLLKPEILRAIGDCGFEHPSEVQHECIPQAILGMDVVCQAKSGMGKTAVFVITT 99
Query: 363 LEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKF-TGLTSAAILGGESIEQQ 539
L++L +P G+ + + + TRELA Q + K+ G+ A GG +I++
Sbjct: 100 LQQL-----EPVDGE-VSVVCMCHTRELAFQISKEYERFSKYLPGVKVAVFFGGMAIKKD 153
Query: 540 FNVMSGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
++ P IVV TPGR L + LKLD + V DE
Sbjct: 154 EERLANDCPHIVVGTPGRMLALARSGKLKLDKVKYFVLDE 193
>Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical
protein C26D10.2a protein.
Length = 425
Score = 91.9 bits (218), Expect = 4e-19
Identities = 55/160 (34%), Positives = 84/160 (52%), Gaps = 1/160 (0%)
Frame = +3
Query: 183 SGAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPI 362
S F+ L +L+ I G++ P+ +Q + IP A+ G DVV A++G GKTA FV+
Sbjct: 40 SSGFRDFLLKPEILRAIGDCGFEHPSEVQHECIPQAILGMDVVCQAKSGMGKTAVFVITT 99
Query: 363 LEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKF-TGLTSAAILGGESIEQQ 539
L++L +P G+ + + + TRELA Q + K+ G+ A GG +I++
Sbjct: 100 LQQL-----EPVDGE-VSVVCMCHTRELAFQISKEYERFSKYLPGVKVAVFFGGMAIKKD 153
Query: 540 FNVMSGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
++ P IVV TPGR L + LKLD + V DE
Sbjct: 154 EERLANDCPHIVVGTPGRMLALARSGKLKLDKVKYFVLDE 193
>U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA
helicase protein.
Length = 417
Score = 91.9 bits (218), Expect = 4e-19
Identities = 55/160 (34%), Positives = 84/160 (52%), Gaps = 1/160 (0%)
Frame = +3
Query: 183 SGAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPI 362
S F+ L +L+ I G++ P+ +Q + IP A+ G DVV A++G GKTA FV+
Sbjct: 39 SSGFRDFLLKPEILRAIGDCGFEHPSEVQHECIPQAILGMDVVCQAKSGMGKTAVFVITT 98
Query: 363 LEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKF-TGLTSAAILGGESIEQQ 539
L++L +P G+ + + + TRELA Q + K+ G+ A GG +I++
Sbjct: 99 LQQL-----EPVDGE-VSVVCMCHTRELAFQISKEYERFSKYLPGVKVAVFFGGMAIKKD 152
Query: 540 FNVMSGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
++ P IVV TPGR L + LKLD + V DE
Sbjct: 153 EERLANDCPHIVVGTPGRMLALARSGKLKLDKVKYFVLDE 192
>Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein (
C.elegans mRNA for eIF-4A homologue. ).
Length = 402
Score = 89.4 bits (212), Expect = 2e-18
Identities = 52/157 (33%), Positives = 89/157 (56%)
Frame = +3
Query: 189 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILE 368
+F M L +L+GI G+++P+ IQ++ I TGKDV+A A++G+GKTA F + IL+
Sbjct: 30 SFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATFSVSILQ 89
Query: 369 KLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNV 548
+ + + P +++AL+++PTRELA Q + + LG++ + +GG S+
Sbjct: 90 R--IDHEDP----HVQALVMAPTRELAQQIQKVMSALGEYLNVNILPCIGGTSVRDDQRK 143
Query: 549 MSGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
+ + +VV TPGR + +L I + V DE
Sbjct: 144 LE-AGIHVVVGTPGRVGDMINRNALDTSRIKMFVLDE 179
>U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation factor
protein 1, isoforma protein.
Length = 402
Score = 89.4 bits (212), Expect = 2e-18
Identities = 52/157 (33%), Positives = 89/157 (56%)
Frame = +3
Query: 189 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILE 368
+F M L +L+GI G+++P+ IQ++ I TGKDV+A A++G+GKTA F + IL+
Sbjct: 30 SFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATFSVSILQ 89
Query: 369 KLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNV 548
+ + + P +++AL+++PTRELA Q + + LG++ + +GG S+
Sbjct: 90 R--IDHEDP----HVQALVMAPTRELAQQIQKVMSALGEYLNVNILPCIGGTSVRDDQRK 143
Query: 549 MSGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
+ + +VV TPGR + +L I + V DE
Sbjct: 144 LE-AGIHVVVGTPGRVGDMINRNALDTSRIKMFVLDE 179
>AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical
protein B0511.6 protein.
Length = 544
Score = 89.4 bits (212), Expect = 2e-18
Identities = 56/148 (37%), Positives = 86/148 (58%), Gaps = 1/148 (0%)
Frame = +3
Query: 219 VLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEKLLVPNNKPT 398
+LK + G+ T IQ K+I L GKDV+A A+TGSGKT F+LP +E L N K
Sbjct: 79 LLKAVQGLGFTTMTEIQAKSIDPLLEGKDVLASAKTGSGKTLAFLLPAIELLHKLNWKQH 138
Query: 399 PGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVMSGSSPDIVV 578
G + +I+SPTREL++QT + EL + + LT ++GG + + + ++ I+V
Sbjct: 139 NGTGV--IIVSPTRELSMQTYGVLSELLEGSNLTYGLVMGGSNRSAEKDKLA-KGVSILV 195
Query: 579 ATPGRFL-HICIEMSLKLDNIXIVVFDE 659
ATPGR L H+ + + N+ ++ DE
Sbjct: 196 ATPGRLLDHLQNTDNFLVRNMKCLIIDE 223
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 89.0 bits (211), Expect = 3e-18
Identities = 54/160 (33%), Positives = 86/160 (53%), Gaps = 5/160 (3%)
Frame = +3
Query: 195 QSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPIL--- 365
Q+ G + ++ I K G+++P+PIQ + P+ L+G+D + +++TGSGKT F+LP L
Sbjct: 87 QAFGSNASIMGEIRKNGFEKPSPIQSQMWPLLLSGQDCIGVSQTGSGKTLAFLLPALLHI 146
Query: 366 --EKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQ 539
+ N + L+LSPTRELA Q V++ + G S + GG S +Q
Sbjct: 147 DAQLAQYEKNDEEQKPSPFVLVLSPTRELAQQIEGEVKKY-SYNGYKSVCLYGGGSRPEQ 205
Query: 540 FNVMSGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
G +IV+ATPGR + + + L ++ VV DE
Sbjct: 206 VEACRG-GVEIVIATPGRLTDLSNDGVISLASVTYVVLDE 244
>AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical
protein H20J04.4a protein.
Length = 488
Score = 88.6 bits (210), Expect = 3e-18
Identities = 54/134 (40%), Positives = 72/134 (53%)
Frame = +3
Query: 192 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 371
F +G+ + + + K TP+Q IP L G D++ ARTG+GKT F +PIL+K
Sbjct: 91 FSQLGVCSWITQQLQTMQIKTATPVQAACIPKILEGSDILGCARTGTGKTLAFAIPILQK 150
Query: 372 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 551
L V + ALIL+PTRELA Q LGK L + I+GG S+ Q +
Sbjct: 151 LSV------DPYGIYALILTPTRELAFQIAEQFTALGKPITLKCSVIVGGRSLIHQAREL 204
Query: 552 SGSSPDIVVATPGR 593
S P +VVATPGR
Sbjct: 205 S-ERPHVVVATPGR 217
>AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical
protein H20J04.4b protein.
Length = 561
Score = 88.6 bits (210), Expect = 3e-18
Identities = 54/134 (40%), Positives = 72/134 (53%)
Frame = +3
Query: 192 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 371
F +G+ + + + K TP+Q IP L G D++ ARTG+GKT F +PIL+K
Sbjct: 91 FSQLGVCSWITQQLQTMQIKTATPVQAACIPKILEGSDILGCARTGTGKTLAFAIPILQK 150
Query: 372 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 551
L V + ALIL+PTRELA Q LGK L + I+GG S+ Q +
Sbjct: 151 LSV------DPYGIYALILTPTRELAFQIAEQFTALGKPITLKCSVIVGGRSLIHQAREL 204
Query: 552 SGSSPDIVVATPGR 593
S P +VVATPGR
Sbjct: 205 S-ERPHVVVATPGR 217
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 88.2 bits (209), Expect = 5e-18
Identities = 55/167 (32%), Positives = 93/167 (55%), Gaps = 11/167 (6%)
Frame = +3
Query: 192 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 371
F + L + + I GY +PTP+Q+ +IP G+D+++ A+TGSGKTA F++P++
Sbjct: 168 FSDLSLHEWIEENIKTAGYDRPTPVQKYSIPALQGGRDLMSCAQTGSGKTAAFLVPLVNA 227
Query: 372 LL------VPNNKPTPGKNLR----ALILSPTRELALQTLRFVRELGKFTGLTSAAILGG 521
+L V + + G + AL+LSPTREL+LQ R+ T +TSA + GG
Sbjct: 228 ILQDGPDAVHRSVTSSGGRKKQYPSALVLSPTRELSLQIFNESRKFAYRTPITSALLYGG 287
Query: 522 -ESIEQQFNVMSGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
E+ + Q + + I++ATPGR + + + + ++ +V DE
Sbjct: 288 RENYKDQIHKLR-LGCHILIATPGRLIDVMDQGLIGMEGCRYLVLDE 333
>U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical
protein F55F8.2b protein.
Length = 579
Score = 86.6 bits (205), Expect = 1e-17
Identities = 48/122 (39%), Positives = 75/122 (61%), Gaps = 6/122 (4%)
Frame = +3
Query: 246 YKQPTPIQRKTIPIALTGK-DVVAMARTGSGKTACFVLPILEKLLVPNN-----KPTPGK 407
+ +PT IQ +P A+ + DV+ A TGSGKT F +P++ +LL ++ + T +
Sbjct: 8 FSEPTEIQSAVLPAAVRDRQDVLGAAETGSGKTLAFGIPLVARLLESSDDSQETESTEVR 67
Query: 408 NLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVMSGSSPDIVVATP 587
RALI++PTREL +Q ++ + L T L + +I+GG + +Q ++S PDIVVATP
Sbjct: 68 GPRALIVAPTRELVIQIMKHINALISTTQLIATSIVGGLAQVKQERIISQQRPDIVVATP 127
Query: 588 GR 593
GR
Sbjct: 128 GR 129
>EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein.
Length = 973
Score = 81.8 bits (193), Expect = 4e-16
Identities = 42/160 (26%), Positives = 87/160 (54%)
Frame = +3
Query: 180 SSGAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLP 359
S+ F+S+ + L+ + + +P+P+Q + IP+ L G+D++ A++G+GKT F
Sbjct: 20 SNCTFESLMIGQKTLERLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTGKTLVF--- 76
Query: 360 ILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQ 539
+L N + +++ +I++PTRE+++Q VR++ TG ++ +GG + +
Sbjct: 77 ---SVLAVENLDSRSSHIQKVIVTPTREISVQIKETVRKVAP-TGARTSVYVGGSAHKLN 132
Query: 540 FNVMSGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
+ + P IV+ TPGR + ++ + ++ V DE
Sbjct: 133 LIDLKQTRPQIVIGTPGRIAQLVKLGAMNMSHVDFFVLDE 172
>CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical
protein T06A10.1 protein.
Length = 973
Score = 81.8 bits (193), Expect = 4e-16
Identities = 42/160 (26%), Positives = 87/160 (54%)
Frame = +3
Query: 180 SSGAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLP 359
S+ F+S+ + L+ + + +P+P+Q + IP+ L G+D++ A++G+GKT F
Sbjct: 20 SNCTFESLMIGQKTLERLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTGKTLVF--- 76
Query: 360 ILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQ 539
+L N + +++ +I++PTRE+++Q VR++ TG ++ +GG + +
Sbjct: 77 ---SVLAVENLDSRSSHIQKVIVTPTREISVQIKETVRKVAP-TGARTSVYVGGSAHKLN 132
Query: 540 FNVMSGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
+ + P IV+ TPGR + ++ + ++ V DE
Sbjct: 133 LIDLKQTRPQIVIGTPGRIAQLVKLGAMNMSHVDFFVLDE 172
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 81.4 bits (192), Expect = 5e-16
Identities = 49/138 (35%), Positives = 73/138 (52%)
Frame = +3
Query: 246 YKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALI 425
+++PT IQ + PIA++G+D++++A+TGSGKT F+LP L + ++ G+ L+
Sbjct: 149 FQKPTVIQSISWPIAMSGRDIISIAKTGSGKTLAFMLPALVHITKQAHRQR-GEGPAVLV 207
Query: 426 LSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVMSGSSPDIVVATPGRFLHI 605
L PTRELA Q + GL + GG S Q + DIVVATPGR L
Sbjct: 208 LLPTRELAQQVQEVSIDFCHSLGLKMTCLFGGASKGPQARDLE-RGVDIVVATPGRLLDF 266
Query: 606 CIEMSLKLDNIXIVVFDE 659
+ + +V DE
Sbjct: 267 LDNGTTNMKKCSYLVLDE 284
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 80.2 bits (189), Expect = 1e-15
Identities = 56/145 (38%), Positives = 75/145 (51%), Gaps = 9/145 (6%)
Frame = +3
Query: 252 QPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEKLL--------VPNNKPTPGK 407
+PTPIQR + + G DVVA A TGSGKT F++P + KL+ V + KP+P
Sbjct: 758 RPTPIQRASFFPIMHGNDVVACAHTGSGKTLAFLIPFVIKLMEEFEKDRDVTDEKPSP-- 815
Query: 408 NLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQF-NVMSGSSPDIVVAT 584
R LI++PTREL QT R+L TGL GG S ++ S S +I+VAT
Sbjct: 816 --RLLIVAPTRELVNQTFTTARQLTYETGLKCGLAFGGYSRNANVQHLRSFSQLNILVAT 873
Query: 585 PGRFLHICIEMSLKLDNIXIVVFDE 659
GR + L + +V DE
Sbjct: 874 MGRLQDFVNAGEVSLSKMKYIVLDE 898
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line helicase
protein 4 protein.
Length = 1156
Score = 80.2 bits (189), Expect = 1e-15
Identities = 56/145 (38%), Positives = 75/145 (51%), Gaps = 9/145 (6%)
Frame = +3
Query: 252 QPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEKLL--------VPNNKPTPGK 407
+PTPIQR + + G DVVA A TGSGKT F++P + KL+ V + KP+P
Sbjct: 758 RPTPIQRASFFPIMHGNDVVACAHTGSGKTLAFLIPFVIKLMEEFEKDRDVTDEKPSP-- 815
Query: 408 NLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQF-NVMSGSSPDIVVAT 584
R LI++PTREL QT R+L TGL GG S ++ S S +I+VAT
Sbjct: 816 --RLLIVAPTRELVNQTFTTARQLTYETGLKCGLAFGGYSRNANVQHLRSFSQLNILVAT 873
Query: 585 PGRFLHICIEMSLKLDNIXIVVFDE 659
GR + L + +V DE
Sbjct: 874 MGRLQDFVNAGEVSLSKMKYIVLDE 898
>AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical
protein C24H12.4a protein.
Length = 634
Score = 80.2 bits (189), Expect = 1e-15
Identities = 43/139 (30%), Positives = 74/139 (53%)
Frame = +3
Query: 192 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 371
F GL +LK I + G+++ +Q I +AL K+++ ARTGSGKT F++P+++K
Sbjct: 91 FADFGLDERILKSIGELGWEKANQVQESVISLALENKNIMGRARTGSGKTGAFLIPLVQK 150
Query: 372 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 551
L+ + A+I++PT+EL Q + +L + A L + E++ +V
Sbjct: 151 LIAESKTNDGSVGPSAVIIAPTKELITQIYKLFVKLSQALPFLQAINL-CDINEEENSVW 209
Query: 552 SGSSPDIVVATPGRFLHIC 608
+VV TPG+ L +C
Sbjct: 210 LEDRSHVVVTTPGKLLRMC 228
>Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical
protein ZK512.2 protein.
Length = 578
Score = 79.4 bits (187), Expect = 2e-15
Identities = 49/152 (32%), Positives = 80/152 (52%), Gaps = 4/152 (2%)
Frame = +3
Query: 216 PVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEKLLVPNNKP 395
P L + + YK T +Q + L DVV + TGSGKT FVLP++ ++ N K
Sbjct: 19 PELLEVFDKSYKSFTDVQVLSGTHLLNLSDVVVESPTGSGKTLAFVLPMMR--MIQNAKL 76
Query: 396 TPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVMSGSSPDIV 575
P ++ ALILSP+REL Q + ++ + LT + GG+ +++ + + +I+
Sbjct: 77 QPA-DIGALILSPSRELCSQIVSVIQPFAEKLNLTVETVTGGQKVDKNIKMFKNKNVNIL 135
Query: 576 VATPGRFLHICIE----MSLKLDNIXIVVFDE 659
VATPGR I ++ K+ + ++V DE
Sbjct: 136 VATPGRLFQIIQHEKTLIARKMRTLQLLVIDE 167
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 75.8 bits (178), Expect = 3e-14
Identities = 51/161 (31%), Positives = 78/161 (48%), Gaps = 4/161 (2%)
Frame = +3
Query: 189 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILE 368
++ + GL +L+ + + Y IQ IP L G DV+ A T +GKTA F LPI++
Sbjct: 382 SWTNSGLHPTILETLKRIKYNNVRTIQGAMIPQVLDGHDVLGQAETSAGKTAAFGLPIID 441
Query: 369 KLL----VPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQ 536
K+L NK ALIL+PTRELA Q +R + T + G +
Sbjct: 442 KILRMDEETRNKARQDDGPLALILAPTRELAAQIHEALRTYCQNTDIIVLLSYGQSDRAR 501
Query: 537 QFNVMSGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
N + DI++ T GR + ++ + L ++ +VFDE
Sbjct: 502 SLNEIRNGC-DILIGTCGRIMDFTVKSHISLLHLRFLVFDE 541
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 74.5 bits (175), Expect = 6e-14
Identities = 61/168 (36%), Positives = 88/168 (52%), Gaps = 10/168 (5%)
Frame = +3
Query: 186 GAFQSMGLSFPVLKGITK-RGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPI 362
G+F M +L+ + K +G PT IQ + IP+AL+G+D++ +A TGSGKT FVLP+
Sbjct: 189 GSFLEMKFPKSLLEFMQKQKGIVTPTAIQIQGIPVALSGRDMIGIASTGSGKTMTFVLPL 248
Query: 363 LEKLLVPNNK-P-TPGKNLRALILSPTRELALQTLRFVRE----LGK--FTGLTSAAILG 518
+ L K P + LI+ P+RELA Q + E LGK + + +G
Sbjct: 249 VMFCLEQEMKLPFMRSEGPFGLIIVPSRELARQIFDLIIEMFDALGKAGLPEMRAGLCIG 308
Query: 519 GESI-EQQFNVMSGSSPDIVVATPGRFLHICIEMSLKLDNIXIVVFDE 659
G I EQ +V G IVVATPGR + + + L+ +V DE
Sbjct: 309 GVPIGEQAKDVRDGI--HIVVATPGRLSDMLTKKIINLEVCRYLVLDE 354
>Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical
protein R05D11.4 protein.
Length = 581
Score = 71.7 bits (168), Expect = 4e-13
Identities = 47/140 (33%), Positives = 74/140 (52%), Gaps = 4/140 (2%)
Frame = +3
Query: 192 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 371
F +S +L +++ +QP+PIQ ++IP ++V+A A TGSGKT F LP++++
Sbjct: 128 FSDSSMSPSLLNRLSENSIRQPSPIQMQSIPFMTERRNVLASAPTGSGKTLAFALPVIDE 187
Query: 372 LLVPNNK----PTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQ 539
+L + + L A++L PTRELA QT + T + SAA GE + Q
Sbjct: 188 ILELKQRADYSSSNSSKLLAVVLEPTRELAAQTYTEFLKYCANTSI-SAANFSGEETDIQ 246
Query: 540 FNVMSGSSPDIVVATPGRFL 599
DI+V+TP R +
Sbjct: 247 -------HADILVSTPNRIV 259
>L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical
protein ZK686.2 protein.
Length = 593
Score = 62.1 bits (144), Expect = 3e-10
Identities = 41/130 (31%), Positives = 67/130 (51%), Gaps = 4/130 (3%)
Frame = +3
Query: 282 PIALTGKDVVAMARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTL 461
P L +DV A TGSGKT C+VLP+L + +KP+ K L+A+IL P + L Q +
Sbjct: 151 PPPLRPRDVAIAAPTGSGKTICYVLPVLAAV---GSKPS--KILQAVILVPVQTLVAQIV 205
Query: 462 RFVRELGKFTGLTSAAIL-GGESIEQQFNVMSGSSPDIVVATPGRFL-HIC--IEMSLKL 629
+ +G+ L G E++ ++ P+++VATP R + H+ I + L
Sbjct: 206 DEFKRWNDESGVAKVVSLSGANDFEKEARQLASDPPNVIVATPARLVQHLTSKIPPPIDL 265
Query: 630 DNIXIVVFDE 659
+ ++ DE
Sbjct: 266 SKLRFLIVDE 275
>Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical
protein T07D4.4c protein.
Length = 613
Score = 58.0 bits (134), Expect = 6e-09
Identities = 46/141 (32%), Positives = 72/141 (51%), Gaps = 4/141 (2%)
Frame = +3
Query: 180 SSGAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTG--KDVVAMARTGSGKTACFV 353
S +F+ + L VLK + ++ PT IQ +P+ L +++A A++G+GKTA FV
Sbjct: 207 SISSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFV 266
Query: 354 LPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSA--AILGGES 527
L +L ++ V N P + + L+PT ELA Q V ++GKF AI GG
Sbjct: 267 LTMLCRIDV--NLMCP----QCICLAPTLELAKQIGEVVEKMGKFIDNLKIHYAIKGGNM 320
Query: 528 IEQQFNVMSGSSPDIVVATPG 590
+ + + IV+ TPG
Sbjct: 321 AAMRGRKL---TEQIVIGTPG 338
>Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical
protein T07D4.4b protein.
Length = 638
Score = 58.0 bits (134), Expect = 6e-09
Identities = 46/141 (32%), Positives = 72/141 (51%), Gaps = 4/141 (2%)
Frame = +3
Query: 180 SSGAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTG--KDVVAMARTGSGKTACFV 353
S +F+ + L VLK + ++ PT IQ +P+ L +++A A++G+GKTA FV
Sbjct: 232 SISSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFV 291
Query: 354 LPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSA--AILGGES 527
L +L ++ V N P + + L+PT ELA Q V ++GKF AI GG
Sbjct: 292 LTMLCRIDV--NLMCP----QCICLAPTLELAKQIGEVVEKMGKFIDNLKIHYAIKGGNM 345
Query: 528 IEQQFNVMSGSSPDIVVATPG 590
+ + + IV+ TPG
Sbjct: 346 AAMRGRKL---TEQIVIGTPG 363
>Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical protein
T07D4.4a protein.
Length = 1022
Score = 58.0 bits (134), Expect = 6e-09
Identities = 46/141 (32%), Positives = 72/141 (51%), Gaps = 4/141 (2%)
Frame = +3
Query: 180 SSGAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTG--KDVVAMARTGSGKTACFV 353
S +F+ + L VLK + ++ PT IQ +P+ L +++A A++G+GKTA FV
Sbjct: 616 SISSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFV 675
Query: 354 LPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSA--AILGGES 527
L +L ++ V N P + + L+PT ELA Q V ++GKF AI GG
Sbjct: 676 LTMLCRIDV--NLMCP----QCICLAPTLELAKQIGEVVEKMGKFIDNLKIHYAIKGGNM 729
Query: 528 IEQQFNVMSGSSPDIVVATPG 590
+ + + IV+ TPG
Sbjct: 730 AAMRGRKL---TEQIVIGTPG 747
>U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical
protein F57B9.3 protein.
Length = 363
Score = 51.2 bits (117), Expect = 6e-07
Identities = 35/132 (26%), Positives = 68/132 (51%), Gaps = 3/132 (2%)
Frame = +3
Query: 201 MGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEKLLV 380
M L +L+GI G+++P+ IQ+ + TGKDV ++ GSGKT ++ IL+ +
Sbjct: 1 MELKEELLRGIYGFGFEKPSAIQKSAVAPCTTGKDVTIQSQAGSGKTVISLIDILQGI-- 58
Query: 381 PNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQ---FNVM 551
+L+ ++L+P R +A + ++ LG+ + +A LG ++ + +V+
Sbjct: 59 ----DCEDAHLQVILLAPQRGMAQRAHEQLKSLGRNLNV-NATCLGFDTTAENDKISHVL 113
Query: 552 SGSSPDIVVATP 587
G+ D + P
Sbjct: 114 MGTPKDFLSNIP 125
>AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical
protein Y55F3BR.1 protein.
Length = 728
Score = 46.8 bits (106), Expect = 1e-05
Identities = 22/60 (36%), Positives = 32/60 (53%)
Frame = +3
Query: 189 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILE 368
AF+ G+ + ++ + PT +Q + IP L G D + A TGSGKT F LPI +
Sbjct: 3 AFEEFGIIPELSDALSSLNWTLPTAVQSEAIPAILGGADALIAAETGSGKTGAFSLPIAQ 62
Score = 38.3 bits (85), Expect = 0.005
Identities = 25/83 (30%), Positives = 37/83 (44%), Gaps = 3/83 (3%)
Frame = +3
Query: 420 LILSPTRELALQTLRFVRELGKFTG---LTSAAILGGESIEQQFNVMSGSSPDIVVATPG 590
+IL PTREL QT + ++ + + GE++ Q + + DIVV TP
Sbjct: 285 VILEPTRELVQQTFQNIQTFASVLDSPKIRCVTLAAGENMNQILRTLE-TGCDIVVGTPS 343
Query: 591 RFLHICIEMSLKLDNIXIVVFDE 659
R + L N+ VV DE
Sbjct: 344 RVFDLIHTGKLATKNLQFVVIDE 366
>AF480439-1|AAM76083.1| 1037|Caenorhabditis elegans dicer-related
helicase protein.
Length = 1037
Score = 45.6 bits (103), Expect = 3e-05
Identities = 35/123 (28%), Positives = 58/123 (47%)
Frame = +3
Query: 267 QRKTIPIALTGKDVVAMARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTREL 446
Q + +AL GK+ + A TGSGKT I E ++ + GK +AL ++P +
Sbjct: 297 QEELCQVALQGKNTIVTAPTGSGKTVIAANIIKEHF---ESRSSEGKRFKALFMTPNSMI 353
Query: 447 ALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVMSGSSPDIVVATPGRFLHICIEMSLK 626
Q + T I G +++ + NV+ S D++VATP +++C E
Sbjct: 354 LNQQAASISSYLDHVYHTQ-IIQGSDNVPTR-NVI--QSKDLIVATPQMIVNLCNEHRNS 409
Query: 627 LDN 635
LD+
Sbjct: 410 LDD 412
>AF036696-4|AAB88350.1| 1037|Caenorhabditis elegans Dicer related
helicase protein 1 protein.
Length = 1037
Score = 45.6 bits (103), Expect = 3e-05
Identities = 35/123 (28%), Positives = 58/123 (47%)
Frame = +3
Query: 267 QRKTIPIALTGKDVVAMARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTREL 446
Q + +AL GK+ + A TGSGKT I E ++ + GK +AL ++P +
Sbjct: 297 QEELCQVALQGKNTIVTAPTGSGKTVIAANIIKEHF---ESRSSEGKRFKALFMTPNSMI 353
Query: 447 ALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVMSGSSPDIVVATPGRFLHICIEMSLK 626
Q + T I G +++ + NV+ S D++VATP +++C E
Sbjct: 354 LNQQAASISSYLDHVYHTQ-IIQGSDNVPTR-NVI--QSKDLIVATPQMIVNLCNEHRNS 409
Query: 627 LDN 635
LD+
Sbjct: 410 LDD 412
>U00052-13|AAW88393.1| 608|Caenorhabditis elegans Hypothetical
protein K02F3.12b protein.
Length = 608
Score = 34.7 bits (76), Expect = 0.059
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +3
Query: 261 PIQRKTIPIALTGKDVVAMARTGSGKTACFVLPIL 365
P+QR I ++ +D V + TG GK+ C+ LP L
Sbjct: 89 PLQRAAINAVMSKEDAVVILSTGGGKSLCYQLPAL 123
>U00052-12|AAK21428.2| 631|Caenorhabditis elegans Hypothetical
protein K02F3.12a protein.
Length = 631
Score = 34.7 bits (76), Expect = 0.059
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +3
Query: 261 PIQRKTIPIALTGKDVVAMARTGSGKTACFVLPIL 365
P+QR I ++ +D V + TG GK+ C+ LP L
Sbjct: 112 PLQRAAINAVMSKEDAVVILSTGGGKSLCYQLPAL 146
>AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical
protein Y46G5A.4 protein.
Length = 2145
Score = 33.5 bits (73), Expect = 0.14
Identities = 33/143 (23%), Positives = 63/143 (44%), Gaps = 4/143 (2%)
Frame = +3
Query: 243 GYKQPTPIQRKTIPIAL-TGKDVVAMARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRA 419
G+K PIQ + + ++V+ A GSGKTA L +L N P +A
Sbjct: 1318 GFKVFNPIQTQVFRTVFESNENVIVCAPNGSGKTAIAELAVLRHF---ENTP----EAKA 1370
Query: 420 LILSPTRELALQTLR-FVRELGKFTGLTSAAILGGESIEQQFNVMSGSSPDIVVATPGRF 596
+ ++P ++A + + R L G T + G EQ ++ ++++TP R+
Sbjct: 1371 VYITPMEDMATKVYADWKRRLEPAIGHTIVLLTG----EQTMDLKLAQRGQLIISTPERW 1426
Query: 597 LHICIEMSLK--LDNIXIVVFDE 659
+I + + N+ + + D+
Sbjct: 1427 DNISRRWKQRKSVQNVKLFIADD 1449
>Z79752-5|CAB02082.3| 1119|Caenorhabditis elegans Hypothetical
protein D2005.5 protein.
Length = 1119
Score = 33.1 bits (72), Expect = 0.18
Identities = 32/111 (28%), Positives = 51/111 (45%), Gaps = 7/111 (6%)
Frame = +3
Query: 267 QRKTIPIALTGKDVVAMARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTREL 446
Q + + AL GK+ V +A TGSGKT + L+ + + + GK R ++L P L
Sbjct: 375 QEELVQPALEGKNCVIVAPTGSGKTEVAIYAALKHI---EERTSQGKPSRVVLLVPKIPL 431
Query: 447 -ALQTLRFVR------ELGKFTGLTSAAILGGESIEQQFNVMSGSSPDIVV 578
Q RF++ E+ F G S+ G E +S +P I++
Sbjct: 432 VGQQKDRFLKYCNGMYEVNGFHGSESSVSGTGRRDEVIATHVSVMTPQILI 482
>Z83123-10|CAB05609.2| 988|Caenorhabditis elegans Hypothetical
protein T04A11.6 protein.
Length = 988
Score = 32.3 bits (70), Expect = 0.31
Identities = 32/114 (28%), Positives = 53/114 (46%), Gaps = 1/114 (0%)
Frame = +3
Query: 234 TKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEKLLVPNNKPTPGKNL 413
+K G+ Q Q++ I L G D + TG+GK+ C+ LP + +L PG
Sbjct: 241 SKFGFNQFRHRQKQCILSTLMGHDTFVLMPTGAGKSLCYQLPAV--IL-------PGV-- 289
Query: 414 RALILSPTRELALQTLRFVRELGKFTGLTS-AAILGGESIEQQFNVMSGSSPDI 572
+++SP R L ++ELG G + A LG + E+ + + +P I
Sbjct: 290 -TVVVSPLRSLIEDQKMKMKELG--IGCEALTADLGAPAQEKIYAELGSGNPSI 340
>AY095296-1|AAM26298.1| 988|Caenorhabditis elegans RecQ helicase
protein.
Length = 988
Score = 32.3 bits (70), Expect = 0.31
Identities = 32/114 (28%), Positives = 53/114 (46%), Gaps = 1/114 (0%)
Frame = +3
Query: 234 TKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEKLLVPNNKPTPGKNL 413
+K G+ Q Q++ I L G D + TG+GK+ C+ LP + +L PG
Sbjct: 241 SKFGFNQFRHRQKQCILSTLMGHDTFVLMPTGAGKSLCYQLPAV--IL-------PGV-- 289
Query: 414 RALILSPTRELALQTLRFVRELGKFTGLTS-AAILGGESIEQQFNVMSGSSPDI 572
+++SP R L ++ELG G + A LG + E+ + + +P I
Sbjct: 290 -TVVVSPLRSLIEDQKMKMKELG--IGCEALTADLGAPAQEKIYAELGSGNPSI 340
>L14331-9|AAA28101.2| 1845|Caenorhabditis elegans Dicer related
protein 1 protein.
Length = 1845
Score = 29.5 bits (63), Expect = 2.2
Identities = 32/127 (25%), Positives = 54/127 (42%), Gaps = 5/127 (3%)
Frame = +3
Query: 294 TGKDVVAMARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVR 473
T K+ + TGSGKT VL +L++ V P RA + L Q +
Sbjct: 25 TKKNTIVQLGTGSGKTFIAVL-LLKEYGVQLFAPLDQGGKRAFFVVEKVNLVEQQAIHIE 83
Query: 474 -----ELGKFTGLTSAAILGGESIEQQFNVMSGSSPDIVVATPGRFLHICIEMSLKLDNI 638
++G+ G TS+ + + QF +VV T L + LK++++
Sbjct: 84 VHTSFKVGQVHGQTSSGLWDSKEQCDQFM----KRHHVVVITAQCLLDLIRHAYLKIEDM 139
Query: 639 XIVVFDE 659
+++FDE
Sbjct: 140 CVLIFDE 146
>U40417-6|AAA81415.2| 90|Caenorhabditis elegans Saposin-like
protein family protein6 protein.
Length = 90
Score = 28.7 bits (61), Expect = 3.9
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = -3
Query: 593 APRCCNNYVWRRARHHIKLLLNGLSTKNSCTR 498
APR C +YV ++ IK L +G S K+ CT+
Sbjct: 54 APRECEHYVDKKLDPIIKELESGTSPKDVCTK 85
>U29097-2|AAA68410.2| 1056|Caenorhabditis elegans Human wrn
(werner's syndrome) relatedprotein 1 protein.
Length = 1056
Score = 28.7 bits (61), Expect = 3.9
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +3
Query: 243 GYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPIL 365
G+K Q + L GKD + TG GK+ C+ LP L
Sbjct: 224 GHKGFREKQWDVVRNVLGGKDQFVLMSTGYGKSVCYQLPSL 264
>Z72502-1|CAA96585.2| 430|Caenorhabditis elegans Hypothetical
protein C08B6.2 protein.
Length = 430
Score = 28.3 bits (60), Expect = 5.1
Identities = 13/24 (54%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
Frame = -3
Query: 323 SGHCNNIFPGQCYWYG-LTLYRCW 255
S N IFP + YWYG L Y+CW
Sbjct: 109 SSEWNKIFPIK-YWYGGLKNYKCW 131
>U39472-8|AAP86618.1| 338|Caenorhabditis elegans Serpentine
receptor, class a (alpha)protein 32 protein.
Length = 338
Score = 28.3 bits (60), Expect = 5.1
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = -1
Query: 589 PGVATTMSGEEPDITLNCCS 530
PG+ TT E DIT+N CS
Sbjct: 177 PGIVTTSCFRETDITINLCS 196
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,815,293
Number of Sequences: 27780
Number of extensions: 278054
Number of successful extensions: 804
Number of sequences better than 10.0: 63
Number of HSP's better than 10.0 without gapping: 713
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 728
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1476380920
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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